Rh1BG039700

tetratricopeptide repeat protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
5207487 .. 5218449
10963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG039700.1

Sequence Viewer

Length: 2739 bp
ATGTCTGAACCGTCGCCGGACCTCGCTATCCTCCGCCTCTACGAGCTCCGTCTCCTCCGCTGCACCTTCCTCTCTCCTCCGCCGCCGTCCGATCCTGAACAACCGTCCGATCAAACCTCGCCCACTCACCCTCTCTCCCCTCTAATCTCCGCCCTCCTCACTTCCATCGAGTCCGGCCGATACCTCGAAGCCCTCACCTCCGCCGACGCAAACCGGCTCGTCTTCAAACTCACCGATTCCGACTCGCTCGGCGACCACGACGCCGACCGAGTCTACTCCGAGTTGCTCCGCCGCGTGGAGTCGTTCATATGCGAAGAAGCTGAGGATAATGGGAAGGACCAGGCCTATAGAGTCGTCGTCGTACTCTGCATTGCCGTAGCTGCCTTACTTGCTTTCACTCAGTCTAACCTAACCGGACCTTTGGAGGGGCTGCCAAGGTGTCCGTTGCCACTGGAAGTGCCCTTATGTGATGAATGGGACAATTGGGCGCGGAATCAGCTTATGGCTGCTGGCTCTGACTTGCTTGGAAAGGTCTATAATATTCAGTATATAATTTATGCAAAGATATTGGTCATGAAGATGAAAGATTTGTTATTTGAAGGAAGTTTGTCTTGTGCATATGGAATTAGGAGCCTTTCATGGTGGCTCGCTAGGGTCACCTTTCTCCATCAGCGCATTCTCGATGAGCGGTCTTCATCTCTGTTCGACCTTTTGCATGTCTTTACAAGTGAAACTTTGAATCATTTTGGCACGTTGGAGAAATTAACAAGTTATTGGGGTAACGATTTGCGTAATGGCGAGGGATCGACACTCGTCTCCGTGATTCATCTGGAAGCTGGAATGATGGAATACATCTATGCACGTGTTGATTCATGCAGGTTGCATTTTGAATCAGCTGAAGCAGCAGCTGGTGTTAAGCTTTCAGTTACAGGGGTTCTTGGCTTCCGTACTATACATCAGGTTGAACCAAAGGCACAAATGGTACTTTTAGCAAACACAACTTCATCAAAGAGTGGGGCTCTCTGTTCCTCTGAAAGCCCTGACCCTCATAGATACGATTCTATTGGCAGAAATGATATGTCTAAGCATCCATCTGAGTCCCATGAGGCTTCTGATATATTATTGACTCCAAGATTGGTAGAGAATGAGAGCGATTCTGGAGTTATATCAGACGGCATTCAAGTTGGTGGTACTACTGCTGACCCTTTGAGTGCAATCCAGCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGAGCACACGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATTGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGACACGTAGTCGCACAAAGGAACGTGCATTGATGATGATGGAAACATCGGTTCAGGGTATCAACGAGCCCTCTCCAGGAGTGGCAGAAAGGATTCCTTTTTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTAATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGAAACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCATTGGGTGATGTTACTAATGATGATGCCTGCTTTGAAAAGGCCCTAGAAGTTTCGAATGATAGGTCAGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGGAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATAGGGATATTGAGAAGGCATTAGATGGCTTTACTCGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCTTGTTTGCATAAGATAAAAGGGAAGAGTAAAGAAGCTTTTATTGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGCTATCAACTGTGGGAGAACTACAGTCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTGCACTGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGCTGAGTTATTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTAATTCAGCAATGACTGATGATGGAGATAACTTTCCCGTCAGTGGGACAACAAATGCAGAATCTGATGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTCCTTGGAAAAGTTCTACAACAGATAGTTCGATGTGGAAATGGAGCTGATAGTTGGGGCTTGTATGCTAGATGGCAAAAAATGAAAGGAGATCTCGCAATGTGCAGGGAAGCTTGGTTAAAGCAAGTCAGATCATACCAGGGATCTGATTTGTGGAAAGATAGAGATCGGTTTAAAAAGTTTGCAAAGTCCTCCTTGGAACTCTGCAAGGTGTATATGGAGATTTCTTCGTCTACTGGCAGCCGTGATGAACTTCTCTCAGCTGAAAGGCACCTAAGGAACATAATTAAACAGGCGGGGAGTTTCTCAGACATGGAAGAGCTTCAACATCTTAAAGCCTGCCTTGATGAAGTGAAGTTAAAACTTGATTCTGATAGTGTGTCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

912

Amino Acids

102.09

Weight (kDa)

5.33

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 867
AccB1I GGYRCC 1 cut(s) 2619
AccB7I CCANNNNNTGG 1 cut(s) 1701
AccBSI CCGCTC 1 cut(s) 688
AccI GTMKAC 4 cut(s) 273, 1385, 2582, 2732
AccII CGCG 2 cut(s) 294, 490
AclWI GGATC 6 cut(s) 86, 811, 1225, 1964, 2175, 2500
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 2 cut(s) 1578, 1867
AcuI CTGAAG 3 cut(s) 918, 2084, 2177
AcvI CACGTG 1 cut(s) 863
AcyI GRCGYC 1 cut(s) 261
AdeI CACNNNGTG 1 cut(s) 1805
AfaI GTAC 4 cut(s) 363, 949, 984, 1192
AfiI CCNNNNNNNGG 7 cut(s) 295, 425, 1460, 1701, 1979, 2288, 2289
AflIII ACRYGT 2 cut(s) 862, 1388
AhdI GACNNNNNGTC 1 cut(s) 1392
AjnI CCWGG 5 cut(s) 339, 1233, 1459, 1694, 2487
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
Alw21I GWGCWC 3 cut(s) 48, 1265, 2340
Alw26I GTCTC 3 cut(s) 56, 820, 1797
AlwI GGATC 6 cut(s) 86, 811, 1225, 1964, 2175, 2500
AlwNI CAGNNNCTG 3 cut(s) 908, 1649, 2309
Ama87I CYCGRG 3 cut(s) 1779, 1953, 2325
AoxI GGCC 4 cut(s) 175, 342, 1749, 1860
ApoI RAATTY 2 cut(s) 1578, 1867
ArsI GACNNNNNNTTYG 2 cut(s) 1757, 1789
Asp700I GAANNNNTTC 2 cut(s) 1476, 2670
AspA2I CCTAGG 1 cut(s) 1897
AspLEI GCGC 2 cut(s) 490, 675
AspS9I GGNCC 4 cut(s) 19, 337, 416, 1750
AsuHPI GGTGA 7 cut(s) 119, 187, 223, 649, 1547, 1727, 2232
AsuII TTCGAA 1 cut(s) 1763
AvaI CYCGRG 3 cut(s) 1779, 1953, 2325
AvaII GGWCC 3 cut(s) 19, 337, 416
AvrII CCTAGG 1 cut(s) 1897
AxyI CCTNAGG 1 cut(s) 2624
BaeGI GKGCMC 1 cut(s) 462
BanI GGYRCC 1 cut(s) 2619
BanII GRGCYC 3 cut(s) 48, 1021, 1455
BbrPI CACGTG 1 cut(s) 863
BbsI GAAGAC 2 cut(s) 214, 684
Bbv12I GWGCWC 3 cut(s) 48, 1265, 2340
BbvCI CCTCAGC 1 cut(s) 321
BceAI ACGGC 5 cut(s) 70, 359, 1189, 1685, 2577
BciT130I CCWGG 5 cut(s) 341, 1235, 1461, 1696, 2489
BciVI GTATCC 1 cut(s) 1887
BclI TGATCA 1 cut(s) 1659
BcoDI GTCTC 3 cut(s) 56, 820, 1797
BfaI CTAG 5 cut(s) 651, 1754, 1898, 2144, 2418
BfmI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
BfuAI ACCTGC 1 cut(s) 867
BfuI GTATCC 1 cut(s) 1887
BglI GCCNNNNNGGC 1 cut(s) 1901
BglII AGATCT 1 cut(s) 2440
BlnI CCTAGG 1 cut(s) 1897
BlpI GCTNAGC 2 cut(s) 1785, 2334
Bme1390I CCNGG 5 cut(s) 341, 1235, 1461, 1696, 2489
Bme18I GGWCC 3 cut(s) 19, 337, 416
BmeRI GACNNNNNGTC 1 cut(s) 1392
BmeT110I CYCGRG 3 cut(s) 1779, 1953, 2325
BmgT120I GGNCC 4 cut(s) 19, 337, 416, 1750
BmiI GGNNCC 3 cut(s) 632, 1299, 2621
BmrFI CCNGG 5 cut(s) 341, 1235, 1461, 1696, 2489
BmsI GCATC 4 cut(s) 1096, 1343, 1723, 2182
BoxI GACNNNNGTC 1 cut(s) 812
BpiI GAAGAC 2 cut(s) 214, 684
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
BpmI CTGGAG 2 cut(s) 1179, 1443
Bpu10I CCTNAGC 2 cut(s) 321, 2136
Bpu1102I GCTNAGC 2 cut(s) 1785, 2334
Bpu14I TTCGAA 1 cut(s) 1763
BsaAI YACGTR 3 cut(s) 863, 1370, 1391
BsaBI GATNNNNATC 2 cut(s) 1499, 2514
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 1 cut(s) 1797
BsaJI CCNNGG 6 cut(s) 434, 1694, 1897, 2353, 2488, 2544
BsaWI WCCGGW 1 cut(s) 413
BsaXI ACNNNNNCTCC 4 cut(s) 119, 149, 1557, 1587
Bsc4I CCNNNNNNNGG 7 cut(s) 295, 425, 1460, 1701, 1979, 2288, 2289
Bse118I RCCGGY 1 cut(s) 213
Bse1I ACTGG 2 cut(s) 456, 2590
Bse21I CCTNAGG 1 cut(s) 2624
Bse3DI GCAATG 5 cut(s) 369, 1863, 2134, 2262, 2454
Bse8I GATNNNNATC 2 cut(s) 1499, 2514
BseBI CCWGG 5 cut(s) 341, 1235, 1461, 1696, 2489
BseDI CCNNGG 6 cut(s) 434, 1694, 1897, 2353, 2488, 2544
BseGI GGATG 1 cut(s) 1087
BseJI GATNNNNATC 2 cut(s) 1499, 2514
BseLI CCNNNNNNNGG 7 cut(s) 295, 425, 1460, 1701, 1979, 2288, 2289
BseMI GCAATG 5 cut(s) 369, 1863, 2134, 2262, 2454
BseMII CTCAG 9 cut(s) 312, 413, 1086, 1337, 2150, 2187, 2325, 2622, 2670
BseNI ACTGG 2 cut(s) 456, 2590
BseRI GAGGAG 3 cut(s) 44, 66, 146
BseSI GKGCMC 1 cut(s) 462
BseX3I CGGCCG 1 cut(s) 175
BsgI GTGCAG 3 cut(s) 46, 2136, 2473
Bsh1236I CGCG 2 cut(s) 294, 490
Bsh1285I CGRYCG 2 cut(s) 178, 268
BshFI GGCC 4 cut(s) 177, 344, 1751, 1862
BshNI GGYRCC 1 cut(s) 2619
BsiEI CGRYCG 2 cut(s) 178, 268
BsiHKAI GWGCWC 3 cut(s) 48, 1265, 2340
BsiHKCI CYCGRG 3 cut(s) 1779, 1953, 2325
BsiSI CCGG 4 cut(s) 17, 174, 214, 414
BslFI GGGAC 3 cut(s) 491, 1084, 2305
BslI CCNNNNNNNGG 7 cut(s) 295, 425, 1460, 1701, 1979, 2288, 2289
BsmAI GTCTC 3 cut(s) 56, 820, 1797
BsmBI CGTCTC 2 cut(s) 56, 820
BsmFI GGGAC 3 cut(s) 491, 1084, 2305
BsmI GAATGC 2 cut(s) 675, 1176
BsnI GGCC 4 cut(s) 177, 344, 1751, 1862
Bso31I GGTCTC 1 cut(s) 1797
BsoBI CYCGRG 3 cut(s) 1779, 1953, 2325
Bsp119I TTCGAA 1 cut(s) 1763
Bsp1286I GDGCHC 6 cut(s) 48, 462, 1021, 1265, 1455, 2340
Bsp1720I GCTNAGC 2 cut(s) 1785, 2334
BspANI GGCC 4 cut(s) 177, 344, 1751, 1862
BspCNI CTCAG 9 cut(s) 313, 412, 1087, 1336, 2149, 2188, 2326, 2621, 2669
BspFNI CGCG 2 cut(s) 294, 490
BspHI TCATGA 1 cut(s) 573
BspLI GGNNCC 3 cut(s) 632, 1299, 2621
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 6 cut(s) 86, 811, 1225, 1964, 2175, 2500
BspQI GCTCTTC 2 cut(s) 1253, 2661
BspT104I TTCGAA 1 cut(s) 1763
BspT107I GGYRCC 1 cut(s) 2619
BspTNI GGTCTC 1 cut(s) 1797
BsrBI CCGCTC 1 cut(s) 688
BsrDI GCAATG 5 cut(s) 369, 1863, 2134, 2262, 2454
BsrFI RCCGGY 1 cut(s) 213
BsrI ACTGG 2 cut(s) 456, 2590
BssAI RCCGGY 1 cut(s) 213
BssECI CCNNGG 6 cut(s) 434, 1694, 1897, 2353, 2488, 2544
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Bst2UI CCWGG 5 cut(s) 341, 1235, 1461, 1696, 2489
Bst4CI ACNGT 6 cut(s) 12, 105, 1510, 1535, 2091, 2105
Bst6I CTCTTC 3 cut(s) 1253, 2021, 2661
BstACI GRCGYC 1 cut(s) 261
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstBAI YACGTR 3 cut(s) 863, 1370, 1391
BstBI TTCGAA 1 cut(s) 1763
BstC8I GCNNGC 6 cut(s) 511, 648, 1224, 1738, 1801, 2689
BstEII GGTNACC 1 cut(s) 655
BstF5I GGATG 1 cut(s) 1087
BstFNI CGCG 2 cut(s) 294, 490
BstHHI GCGC 2 cut(s) 490, 675
BstMAI GTCTC 3 cut(s) 56, 820, 1797
BstMCI CGRYCG 2 cut(s) 178, 268
BstMWI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
BstNI CCWGG 5 cut(s) 341, 1235, 1461, 1696, 2489
BstNSI RCATGY 2 cut(s) 719, 1282
BstPAI GACNNNNGTC 1 cut(s) 812
BstPI GGTNACC 1 cut(s) 655
BstSCI CCNGG 5 cut(s) 339, 1233, 1459, 1694, 2487
BstSFI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
BstSLI GKGCMC 1 cut(s) 462
BstSNI TACGTA 1 cut(s) 1370
BstUI CGCG 2 cut(s) 294, 490
BstV2I GAAGAC 2 cut(s) 214, 684
BstX2I RGATCY 3 cut(s) 2167, 2440, 2492
BstYI RGATCY 3 cut(s) 2167, 2440, 2492
BstZI CGGCCG 1 cut(s) 175
Bsu36I CCTNAGG 1 cut(s) 2624
BsuI GTATCC 1 cut(s) 1887
BsuRI GGCC 4 cut(s) 177, 344, 1751, 1862
BtsCI GGATG 1 cut(s) 1087
BtsI GCAGTG 2 cut(s) 1233, 1810
BtsIMutI CAGTG 6 cut(s) 449, 1233, 1810, 2060, 2153, 2293
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 6 cut(s) 511, 648, 1224, 1738, 1801, 2689
CaiI CAGNNNCTG 3 cut(s) 908, 1649, 2309
CciI TCATGA 1 cut(s) 573
CfoI GCGC 2 cut(s) 490, 675
Cfr10I RCCGGY 1 cut(s) 213
Cfr13I GGNCC 4 cut(s) 19, 337, 416, 1750
CseI GACGC 2 cut(s) 215, 269
Csp6I GTAC 4 cut(s) 362, 948, 983, 1191
CviQI GTAC 4 cut(s) 362, 948, 983, 1191
DraI TTTAAA 1 cut(s) 2524
DraIII CACNNNGTG 1 cut(s) 1805
DriI GACNNNNNGTC 1 cut(s) 1392
EaeI YGGCCR 1 cut(s) 175
EagI CGGCCG 1 cut(s) 175
Eam1104I CTCTTC 3 cut(s) 1253, 2021, 2661
Eam1105I GACNNNNNGTC 1 cut(s) 1392
EarI CTCTTC 3 cut(s) 1253, 2021, 2661
EciI GGCGGA 5 cut(s) 23, 69, 139, 190, 278
Ecl136II GAGCTC 1 cut(s) 46
EclXI CGGCCG 1 cut(s) 175
Eco105I TACGTA 1 cut(s) 1370
Eco130I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Eco147I AGGCCT 1 cut(s) 344
Eco24I GRGCYC 3 cut(s) 48, 1021, 1455
Eco31I GGTCTC 1 cut(s) 1797
Eco47I GGWCC 3 cut(s) 19, 337, 416
Eco52I CGGCCG 1 cut(s) 175
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 3 cut(s) 918, 2084, 2177
Eco72I CACGTG 1 cut(s) 863
Eco81I CCTNAGG 1 cut(s) 2624
Eco88I CYCGRG 3 cut(s) 1779, 1953, 2325
Eco91I GGTNACC 1 cut(s) 655
EcoICRI GAGCTC 1 cut(s) 46
EcoO109I RGGNCCY 1 cut(s) 1750
EcoO65I GGTNACC 1 cut(s) 655
EcoRI GAATTC 1 cut(s) 1867
EcoRII CCWGG 5 cut(s) 339, 1233, 1459, 1694, 2487
EcoT14I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
EcoT38I GRGCYC 3 cut(s) 48, 1021, 1455
ErhI CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Esp3I CGTCTC 2 cut(s) 56, 820
FaqI GGGAC 3 cut(s) 491, 1084, 2305
FauI CCCGC 1 cut(s) 2638
FauNDI CATATG 2 cut(s) 308, 619
FbaI TGATCA 1 cut(s) 1659
FblI GTMKAC 4 cut(s) 273, 1385, 2582, 2732
FokI GGATG 1 cut(s) 1074
FriOI GRGCYC 3 cut(s) 48, 1021, 1455
FspBI CTAG 5 cut(s) 651, 1754, 1898, 2144, 2418
GlaI GCGC 2 cut(s) 489, 674
GsuI CTGGAG 2 cut(s) 1179, 1443
HaeIII GGCC 4 cut(s) 177, 344, 1751, 1862
HapII CCGG 4 cut(s) 17, 174, 214, 414
HgaI GACGC 2 cut(s) 215, 269
HhaI GCGC 2 cut(s) 490, 675
Hin1I GRCGYC 1 cut(s) 261
Hin6I GCGC 2 cut(s) 488, 673
HinP1I GCGC 2 cut(s) 488, 673
HincII GTYRAC 1 cut(s) 1386
HindII GTYRAC 1 cut(s) 1386
HindIII AAGCTT 3 cut(s) 917, 2037, 2460
HpaII CCGG 4 cut(s) 17, 174, 214, 414
HphI GGTGA 7 cut(s) 119, 187, 223, 649, 1547, 1727, 2232
Hpy166II GTNNAC 5 cut(s) 274, 1386, 1538, 2583, 2733
Hpy8I GTNNAC 5 cut(s) 274, 1386, 1538, 2583, 2733
Hpy99I CGWCG 6 cut(s) 16, 209, 263, 359, 362, 1353
HpyAV CCTTC 7 cut(s) 76, 328, 593, 1256, 1519, 1927, 2152
HpyCH4III ACNGT 6 cut(s) 12, 105, 1510, 1535, 2091, 2105
HpyCH4IV ACGT 5 cut(s) 752, 862, 1369, 1390, 1408
HpyF10VI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
HpySE526I ACGT 5 cut(s) 752, 862, 1369, 1390, 1408
Hsp92I GRCGYC 1 cut(s) 261
HspAI GCGC 2 cut(s) 488, 673
Ksp22I TGATCA 1 cut(s) 1659
LguI GCTCTTC 2 cut(s) 1253, 2661
LmnI GCTCC 5 cut(s) 51, 291, 630, 1303, 2393
LweI GCATC 4 cut(s) 1096, 1343, 1723, 2182
MaeI CTAG 5 cut(s) 651, 1754, 1898, 2144, 2418
MaeII ACGT 5 cut(s) 752, 862, 1369, 1390, 1408
MaeIII GTNAC 4 cut(s) 655, 779, 925, 1720
MbiI CCGCTC 1 cut(s) 688
MboII GAAGA 8 cut(s) 214, 326, 589, 684, 1270, 2038, 2568, 2678
MfeI CAATTG 2 cut(s) 481, 1314
MflI RGATCY 3 cut(s) 2167, 2440, 2492
MhlI GDGCHC 6 cut(s) 48, 462, 1021, 1265, 1455, 2340
MlyI GAGTC 9 cut(s) 179, 236, 279, 308, 360, 1106, 1120, 1391, 1859
MmeI TCCRAC 3 cut(s) 264, 735, 2145
MroXI GAANNNNTTC 2 cut(s) 1476, 2670
MseI TTAA 9 cut(s) 764, 915, 1913, 2468, 2523, 2637, 2682, 2708, 2737
MslI CAYNNNNRTG 1 cut(s) 578
MspA1I CMGCKG 6 cut(s) 60, 896, 908, 1551, 1649, 2612
MspI CCGG 4 cut(s) 17, 174, 214, 414
MspR9I CCNGG 5 cut(s) 341, 1235, 1461, 1696, 2489
MunI CAATTG 2 cut(s) 481, 1314
Mva1269I GAATGC 2 cut(s) 675, 1176
MvaI CCWGG 5 cut(s) 341, 1235, 1461, 1696, 2489
MvnI CGCG 2 cut(s) 294, 490
MwoI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
NdeI CATATG 2 cut(s) 308, 619
NlaIV GGNNCC 3 cut(s) 632, 1299, 2621
NmeAIII GCCGAG 1 cut(s) 228
NmuCI GTSAC 1 cut(s) 655
NspI RCATGY 2 cut(s) 719, 1282
NspV TTCGAA 1 cut(s) 1763
PagI TCATGA 1 cut(s) 573
PceI AGGCCT 1 cut(s) 344
PciSI GCTCTTC 2 cut(s) 1253, 2661
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 2 cut(s) 675, 1176
PdmI GAANNNNTTC 2 cut(s) 1476, 2670
PflFI GACNNNGTC 1 cut(s) 269
PflMI CCANNNNNTGG 1 cut(s) 1701
PfoI TCCNGGA 1 cut(s) 1459
PleI GAGTC 9 cut(s) 178, 236, 278, 307, 359, 1105, 1120, 1390, 1858
PmaCI CACGTG 1 cut(s) 863
PmlI CACGTG 1 cut(s) 863
PpsI GAGTC 9 cut(s) 178, 236, 278, 307, 359, 1105, 1120, 1390, 1858
Ppu21I YACGTR 3 cut(s) 863, 1370, 1391
PshAI GACNNNNGTC 1 cut(s) 812
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 5 cut(s) 339, 1233, 1459, 1694, 2487
PspCI CACGTG 1 cut(s) 863
PspEI GGTNACC 1 cut(s) 655
PspGI CCWGG 5 cut(s) 339, 1233, 1459, 1694, 2487
PspN4I GGNNCC 3 cut(s) 632, 1299, 2621
PspPI GGNCC 4 cut(s) 19, 337, 416, 1750
PstNI CAGNNNCTG 3 cut(s) 908, 1649, 2309
PsuI RGATCY 3 cut(s) 2167, 2440, 2492
PsyI GACNNNGTC 1 cut(s) 269
PvuII CAGCTG 4 cut(s) 896, 908, 1649, 2612
RsaI GTAC 4 cut(s) 363, 949, 984, 1192
RsaNI GTAC 4 cut(s) 362, 948, 983, 1191
RseI CAYNNNNRTG 1 cut(s) 578
SacI GAGCTC 1 cut(s) 48
SalI GTCGAC 1 cut(s) 1384
SapI GCTCTTC 2 cut(s) 1253, 2661
SaqAI TTAA 9 cut(s) 764, 915, 1913, 2468, 2523, 2637, 2682, 2708, 2737
Sau96I GGNCC 4 cut(s) 19, 337, 416, 1750
SchI GAGTC 9 cut(s) 179, 236, 279, 308, 360, 1106, 1120, 1391, 1859
ScrFI CCNGG 5 cut(s) 341, 1235, 1461, 1696, 2489
SduI GDGCHC 6 cut(s) 48, 462, 1021, 1265, 1455, 2340
SfaNI GCATC 4 cut(s) 1096, 1343, 1723, 2182
SfcI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
SfuI TTCGAA 1 cut(s) 1763
SinI GGWCC 3 cut(s) 19, 337, 416
SmiMI CAYNNNNRTG 1 cut(s) 578
SnaBI TACGTA 1 cut(s) 1370
SseBI AGGCCT 1 cut(s) 344
SspI AATATT 3 cut(s) 541, 1614, 1999
SspMI CTAG 5 cut(s) 651, 1754, 1898, 2144, 2418
SstI GAGCTC 1 cut(s) 48
StuI AGGCCT 1 cut(s) 344
StyD4I CCNGG 5 cut(s) 339, 1233, 1459, 1694, 2487
StyI CCWWGG 4 cut(s) 434, 1897, 2353, 2544
TaaI ACNGT 6 cut(s) 12, 105, 1510, 1535, 2091, 2105
TaiI ACGT 5 cut(s) 755, 865, 1372, 1393, 1411
TaqI TCGA 8 cut(s) 168, 186, 681, 705, 806, 1385, 1763, 2380
TaqII GACCGA 1 cut(s) 282
TauI GCSGC 2 cut(s) 85, 294
Tru1I TTAA 9 cut(s) 764, 915, 1913, 2468, 2523, 2637, 2682, 2708, 2737
Tru9I TTAA 9 cut(s) 764, 915, 1913, 2468, 2523, 2637, 2682, 2708, 2737
TscAI CASTG 6 cut(s) 456, 1233, 1810, 2067, 2160, 2293
TseFI GTSAC 1 cut(s) 655
Tsp45I GTSAC 1 cut(s) 655
TspGWI ACGGA 4 cut(s) 38, 432, 808, 935
TspRI CASTG 6 cut(s) 456, 1233, 1810, 2067, 2160, 2293
Tth111I GACNNNGTC 1 cut(s) 269
Van91I CCANNNNNTGG 1 cut(s) 1701
VpaK11BI GGWCC 3 cut(s) 19, 337, 416
XapI RAATTY 2 cut(s) 1578, 1867
XbaI TCTAGA 1 cut(s) 2143
XceI RCATGY 2 cut(s) 719, 1282
XmaJI CCTAGG 1 cut(s) 1897
XmiI GTMKAC 4 cut(s) 273, 1385, 2582, 2732
XmnI GAANNNNTTC 2 cut(s) 1476, 2670
XspI CTAG 5 cut(s) 651, 1754, 1898, 2144, 2418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.