RchiOBHm_Chr1g0320601

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000877
Physical Location & Seq
Reverse (-)
8249013 .. 8260044
11032 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55074

Sequence Viewer

Length: 2091 bp
ATGAGAATTGGGCTCGCTAGGGTCACCTTTCTCCATCAGCGCATTCTCAATGAGCGGTCTTCATCTCTGTTCAACCTTTTGCATGTCTTTACAAGTGAAACTTTGAATCATTTTGGTACGTTGGAGAAAGTAACAAGTTATTGGGGTAACGATTTGCGTAATGGCGAGGGATCGACACTCGTCTCAGTGATTCATCTGGAAGCTGGAATGATGGAATACATCTATGCACGTGTTGATTCATGCAGGTTGCATTTTGAATCAGCTGAAGTAGCAGCTGGTGTTAAGCTTTCAGTTACCGGGGTTCTTGGCTTCCGTACCATACATCAGGTTGAACCAAAGGCACAAATGGTACTTTTAGCAAACACAACTTCATCAAAGAGTGGGGCTCTCTGTTCCTCTGAAAGCCCTGGCCCTCATAGATACAATTCTATTGGCAGAAATGATATATCTAAGCATCCATCTGAGTCCCATGAGGCTTCTGATATATTATTGACTCCAAGATTGGTAGAGAGTGAGAGCGAGTCTGGAGTTATATCAGACGGCATTCAAGTTGGTGGTACTGCTGCTGACCCTTTGAGTGCAATCCAGCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGAGCACGCGACATGATGACATGCAGAAGTTCACTACAGATGGGAAATGGCTCCATACATCGAAGCAATTGATTCTTAGCTATCATCATATTTTATTGTGTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGAGACGTAGTCACACAAAGGAACGTGCATTGATGATGATGGAAACATTGGTTCAGGGCATCAACGATCCCTCTCCAGGAGTGGCAGTCAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTTCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTAATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCGTTGGGTGACGTTACTGATGATGATGCCTGCTTTGAAAAAGCCCTAGAAGTCTCAAACGATAGGTCGGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGGAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTCGCCCTAGGGGCTGCTGCATTAAAGGCACTAGATGGCTTTACACGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATCGCCTGTTTGCATATGATAAAAGGGAAGAGAAAAGAAGCTTTCATTGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGCTATCAACTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTGCACGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGCTGAGTTATTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTAATTCTGCAATGACTGATGATGAAGATAACTTTCTCATTTGTGGGACCACAAATGCAGCATCTGAGGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTCCTTGGAAAAATAGTTCGGAGTGGAAATGGAACAGATATTTGGGGCTTGTATGCTAGATGGCAAAAAATGAAAGGAGACATCTCAATGTGCAGAGAAGCTTGGTTAAAGCAAGTCAGATCATACCAGGGATCTGATTTGTGGAAAGATAGAGACTGGTTTAAAAAGTTTGCGAAATCCTCCTTGGAACTCTGCAAGGTGTATATGGAGATTTCTTCATCTACTGGCAGCCGTGATGAACTTCTCTCAGCTGAAAGGCACCCAAGGAACATAATGAAACAGGCGGGGAGTTTCGCAGACATGGAAGAACTTCAACATCTTAAAGCCTGCCTTGATGAAGTGAAGTTAAAACTTGATTGTGATAGTGTGGCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

696

Amino Acids

78.1

Weight (kDa)

6.47

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 234
AccB1I GGYRCC 1 cut(s) 1971
AccB7I CCANNNNNTGG 1 cut(s) 1083
AccBSI CCGCTC 1 cut(s) 55
AccI GTMKAC 1 cut(s) 727
AccII CGCG 1 cut(s) 634
AciI CCGC 4 cut(s) 55, 904, 1171, 1997
AclWI GGATC 6 cut(s) 178, 592, 827, 1328, 1539, 1852
AcsI RAATTY 2 cut(s) 960, 1249
AcuI CTGAAG 2 cut(s) 285, 1448
AcvI CACGTG 1 cut(s) 230
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 4 cut(s) 118, 316, 351, 559
AfiI CCNNNNNNNGG 3 cut(s) 842, 1083, 1343
AflIII ACRYGT 1 cut(s) 229
AjnI CCWGG 5 cut(s) 406, 600, 841, 1076, 1839
AjuI GAANNNNNNNTTGG 4 cut(s) 1738, 1770, 1880, 1912
AloI GAACNNNNNNTCC 2 cut(s) 1713, 1745
Alw21I GWGCWC 2 cut(s) 632, 1704
Alw26I GTCTC 6 cut(s) 187, 763, 1147, 1179, 1785, 1860
AlwI GGATC 6 cut(s) 178, 592, 827, 1328, 1539, 1852
AlwNI CAGNNNCTG 2 cut(s) 1031, 1673
Ama87I CYCGRG 2 cut(s) 1161, 1689
AoxI GGCC 2 cut(s) 409, 1242
ApeKI GCWGC 9 cut(s) 272, 563, 1025, 1028, 1286, 1289, 1514, 1667, 1941
ApoI RAATTY 2 cut(s) 960, 1249
ArsI GACNNNNNNTTYG 2 cut(s) 1139, 1171
Asp700I GAANNNNTTC 1 cut(s) 2022
AspA2I CCTAGG 1 cut(s) 1279
AspLEI GCGC 1 cut(s) 42
AspS9I GGNCC 2 cut(s) 410, 1656
AsuC2I CCSGG 1 cut(s) 298
AsuHPI GGTGA 4 cut(s) 16, 929, 1109, 1596
AvaI CYCGRG 2 cut(s) 1161, 1689
AvaII GGWCC 1 cut(s) 1656
AvrII CCTAGG 1 cut(s) 1279
BanI GGYRCC 1 cut(s) 1971
BanII GRGCYC 2 cut(s) 15, 388
BbrPI CACGTG 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 51
Bbv12I GWGCWC 2 cut(s) 632, 1704
BbvI GCAGC 9 cut(s) 284, 550, 1037, 1040, 1273, 1276, 1501, 1679, 1953
BccI CCATC 8 cut(s) 42, 205, 466, 659, 799, 1259, 1301, 1767
BceAI ACGGC 3 cut(s) 556, 1067, 1929
BciT130I CCWGG 5 cut(s) 408, 602, 843, 1078, 1841
BciVI GTATCC 1 cut(s) 1269
BclI TGATCA 1 cut(s) 1041
BcnI CCSGG 1 cut(s) 298
BcoDI GTCTC 6 cut(s) 187, 763, 1147, 1179, 1785, 1860
BfaI CTAG 6 cut(s) 18, 1136, 1280, 1304, 1508, 1770
BfmI CTRYAG 4 cut(s) 660, 888, 1003, 1465
BfuAI ACCTGC 1 cut(s) 234
BfuI GTATCC 1 cut(s) 1269
BglI GCCNNNNNGGC 1 cut(s) 1283
BisI GCNGC 9 cut(s) 273, 564, 1026, 1029, 1287, 1290, 1515, 1668, 1942
BlnI CCTAGG 1 cut(s) 1279
BlpI GCTNAGC 2 cut(s) 1167, 1698
BlsI GCNGC 9 cut(s) 274, 565, 1027, 1030, 1288, 1291, 1516, 1669, 1943
Bme1390I CCNGG 6 cut(s) 298, 408, 602, 843, 1078, 1841
Bme18I GGWCC 1 cut(s) 1656
BmeT110I CYCGRG 2 cut(s) 1161, 1689
BmgT120I GGNCC 2 cut(s) 410, 1656
BmiI GGNNCC 3 cut(s) 677, 1657, 1973
BmrFI CCNGG 6 cut(s) 298, 408, 602, 843, 1078, 1841
BmsI GCATC 6 cut(s) 463, 725, 834, 1105, 1546, 1679
BoxI GACNNNNGTC 1 cut(s) 179
BpiI GAAGAC 1 cut(s) 51
BplI GAGNNNNNCTC 2 cut(s) 370, 402
BpmI CTGGAG 2 cut(s) 546, 825
Bpu10I CCTNAGC 1 cut(s) 1500
Bpu1102I GCTNAGC 2 cut(s) 1167, 1698
BpuMI CCSGG 1 cut(s) 298
BsaAI YACGTR 2 cut(s) 230, 752
BsaBI GATNNNNATC 1 cut(s) 881
BsaI GGTCTC 1 cut(s) 1179
BsaJI CCNNGG 8 cut(s) 297, 406, 1076, 1279, 1717, 1840, 1896, 1976
BsaXI ACNNNNNCTCC 4 cut(s) 837, 867, 939, 969
Bsc4I CCNNNNNNNGG 3 cut(s) 842, 1083, 1343
Bse1I ACTGG 2 cut(s) 1874, 1942
Bse3DI GCAATG 4 cut(s) 1245, 1407, 1498, 1626
Bse8I GATNNNNATC 1 cut(s) 881
BseBI CCWGG 5 cut(s) 408, 602, 843, 1078, 1841
BseDI CCNNGG 8 cut(s) 297, 406, 1076, 1279, 1717, 1840, 1896, 1976
BseGI GGATG 1 cut(s) 454
BseJI GATNNNNATC 1 cut(s) 881
BseLI CCNNNNNNNGG 3 cut(s) 842, 1083, 1343
BseMI GCAATG 4 cut(s) 1245, 1407, 1498, 1626
BseMII CTCAG 7 cut(s) 198, 453, 1514, 1551, 1665, 1689, 1974
BseNI ACTGG 2 cut(s) 1874, 1942
BseXI GCAGC 9 cut(s) 284, 550, 1037, 1040, 1273, 1276, 1501, 1679, 1953
BsgI GTGCAG 2 cut(s) 1500, 1825
Bsh1236I CGCG 1 cut(s) 634
BshFI GGCC 2 cut(s) 411, 1244
BshNI GGYRCC 1 cut(s) 1971
BsiHKAI GWGCWC 2 cut(s) 632, 1704
BsiHKCI CYCGRG 2 cut(s) 1161, 1689
BsiSI CCGG 1 cut(s) 297
BslFI GGGAC 2 cut(s) 451, 1669
BslI CCNNNNNNNGG 3 cut(s) 842, 1083, 1343
BsmAI GTCTC 6 cut(s) 187, 763, 1147, 1179, 1785, 1860
BsmBI CGTCTC 2 cut(s) 187, 763
BsmFI GGGAC 2 cut(s) 451, 1669
BsmI GAATGC 2 cut(s) 42, 543
BsnI GGCC 2 cut(s) 411, 1244
Bso31I GGTCTC 1 cut(s) 1179
BsoBI CYCGRG 2 cut(s) 1161, 1689
Bsp1286I GDGCHC 4 cut(s) 15, 388, 632, 1704
Bsp143I GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
Bsp1720I GCTNAGC 2 cut(s) 1167, 1698
BspACI CCGC 4 cut(s) 55, 904, 1171, 1997
BspANI GGCC 2 cut(s) 411, 1244
BspCNI CTCAG 7 cut(s) 197, 454, 1513, 1552, 1666, 1690, 1973
BspFNI CGCG 1 cut(s) 634
BspLI GGNNCC 3 cut(s) 677, 1657, 1973
BspMI ACCTGC 1 cut(s) 234
BspPI GGATC 6 cut(s) 178, 592, 827, 1328, 1539, 1852
BspQI GCTCTTC 1 cut(s) 620
BspT107I GGYRCC 1 cut(s) 1971
BspTNI GGTCTC 1 cut(s) 1179
BsrBI CCGCTC 1 cut(s) 55
BsrDI GCAATG 4 cut(s) 1245, 1407, 1498, 1626
BsrI ACTGG 2 cut(s) 1874, 1942
BssECI CCNNGG 8 cut(s) 297, 406, 1076, 1279, 1717, 1840, 1896, 1976
BssMI GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
BssNAI GTATAC 1 cut(s) 728
BssT1I CCWWGG 4 cut(s) 1279, 1717, 1896, 1976
Bst1107I GTATAC 1 cut(s) 728
Bst2UI CCWGG 5 cut(s) 408, 602, 843, 1078, 1841
Bst4CI ACNGT 3 cut(s) 892, 917, 1455
Bst6I CTCTTC 2 cut(s) 620, 1385
BstAPI GCANNNNNTGC 1 cut(s) 1187
BstBAI YACGTR 2 cut(s) 230, 752
BstC8I GCNNGC 6 cut(s) 15, 591, 632, 1120, 1183, 2041
BstEII GGTNACC 1 cut(s) 22
BstF5I GGATG 1 cut(s) 454
BstFNI CGCG 1 cut(s) 634
BstHHI GCGC 1 cut(s) 42
BstKTI GATC 8 cut(s) 173, 600, 835, 1044, 1336, 1534, 1835, 1847
BstMAI GTCTC 6 cut(s) 187, 763, 1147, 1179, 1785, 1860
BstMBI GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
BstMWI GCNNNNNNNGC 6 cut(s) 269, 1187, 1283, 1298, 1409, 1511
BstNI CCWGG 5 cut(s) 408, 602, 843, 1078, 1841
BstNSI RCATGY 2 cut(s) 86, 649
BstPAI GACNNNNGTC 1 cut(s) 179
BstPI GGTNACC 1 cut(s) 22
BstSCI CCNGG 6 cut(s) 296, 406, 600, 841, 1076, 1839
BstSFI CTRYAG 4 cut(s) 660, 888, 1003, 1465
BstSNI TACGTA 1 cut(s) 752
BstUI CGCG 1 cut(s) 634
BstV1I GCAGC 9 cut(s) 284, 550, 1037, 1040, 1273, 1276, 1501, 1679, 1953
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 2 cut(s) 1531, 1844
BstYI RGATCY 2 cut(s) 1531, 1844
BstZ17I GTATAC 1 cut(s) 728
BsuI GTATCC 1 cut(s) 1269
BsuRI GGCC 2 cut(s) 411, 1244
BtsCI GGATG 1 cut(s) 454
BtsI GCAGTG 2 cut(s) 600, 1192
BtsIMutI CAGTG 4 cut(s) 192, 600, 1192, 1424
BveI ACCTGC 1 cut(s) 234
Cac8I GCNNGC 6 cut(s) 15, 591, 632, 1120, 1183, 2041
CaiI CAGNNNCTG 2 cut(s) 1031, 1673
CfoI GCGC 1 cut(s) 42
Cfr13I GGNCC 2 cut(s) 410, 1656
Csp6I GTAC 4 cut(s) 117, 315, 350, 558
CviAII CATG 9 cut(s) 83, 240, 470, 638, 646, 1353, 1472, 1597, 2014
CviQI GTAC 4 cut(s) 117, 315, 350, 558
DpnI GATC 8 cut(s) 172, 599, 834, 1043, 1335, 1533, 1834, 1846
DpnII GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
DraI TTTAAA 1 cut(s) 1876
DraIII CACNNNGTG 1 cut(s) 1187
Eam1104I CTCTTC 2 cut(s) 620, 1385
EarI CTCTTC 2 cut(s) 620, 1385
Eco105I TACGTA 1 cut(s) 752
Eco130I CCWWGG 4 cut(s) 1279, 1717, 1896, 1976
Eco24I GRGCYC 2 cut(s) 15, 388
Eco31I GGTCTC 1 cut(s) 1179
Eco47I GGWCC 1 cut(s) 1656
Eco57I CTGAAG 2 cut(s) 285, 1448
Eco72I CACGTG 1 cut(s) 230
Eco88I CYCGRG 2 cut(s) 1161, 1689
Eco91I GGTNACC 1 cut(s) 22
EcoO65I GGTNACC 1 cut(s) 22
EcoRI GAATTC 1 cut(s) 1249
EcoRII CCWGG 5 cut(s) 406, 600, 841, 1076, 1839
EcoT14I CCWWGG 4 cut(s) 1279, 1717, 1896, 1976
EcoT38I GRGCYC 2 cut(s) 15, 388
ErhI CCWWGG 4 cut(s) 1279, 1717, 1896, 1976
Esp3I CGTCTC 2 cut(s) 187, 763
FaeI CATG 9 cut(s) 86, 243, 473, 641, 649, 1356, 1475, 1600, 2017
FalI AAGNNNNNCTT 6 cut(s) 85, 117, 1585, 1617, 2028, 2060
FaqI GGGAC 2 cut(s) 451, 1669
FatI CATG 9 cut(s) 82, 239, 469, 637, 645, 1352, 1471, 1596, 2013
FauI CCCGC 1 cut(s) 1990
FauNDI CATATG 1 cut(s) 1377
FbaI TGATCA 1 cut(s) 1041
FblI GTMKAC 1 cut(s) 727
Fnu4HI GCNGC 9 cut(s) 273, 564, 1026, 1029, 1287, 1290, 1515, 1668, 1942
FokI GGATG 1 cut(s) 441
FriOI GRGCYC 2 cut(s) 15, 388
Fsp4HI GCNGC 9 cut(s) 273, 564, 1026, 1029, 1287, 1290, 1515, 1668, 1942
FspBI CTAG 6 cut(s) 18, 1136, 1280, 1304, 1508, 1770
GlaI GCGC 1 cut(s) 41
GluI GCNGC 9 cut(s) 273, 564, 1026, 1029, 1287, 1290, 1515, 1668, 1942
GsuI CTGGAG 2 cut(s) 546, 825
HaeIII GGCC 2 cut(s) 411, 1244
HapII CCGG 1 cut(s) 297
HhaI GCGC 1 cut(s) 42
Hin1II CATG 9 cut(s) 86, 243, 473, 641, 649, 1356, 1475, 1600, 2017
Hin6I GCGC 1 cut(s) 40
HinP1I GCGC 1 cut(s) 40
HindIII AAGCTT 3 cut(s) 284, 1401, 1812
HpaII CCGG 1 cut(s) 297
HphI GGTGA 4 cut(s) 16, 929, 1109, 1596
Hpy166II GTNNAC 3 cut(s) 657, 728, 920
Hpy188III TCNNGA 9 cut(s) 197, 525, 768, 856, 1045, 1262, 1337, 1508, 1691
Hpy8I GTNNAC 3 cut(s) 657, 728, 920
Hpy99I CGWCG 1 cut(s) 735
HpyAV CCTTC 3 cut(s) 623, 901, 1516
HpyCH4III ACNGT 3 cut(s) 892, 917, 1455
HpyCH4IV ACGT 6 cut(s) 119, 229, 751, 772, 790, 1101
HpyF10VI GCNNNNNNNGC 6 cut(s) 269, 1187, 1283, 1298, 1409, 1511
HpySE526I ACGT 6 cut(s) 119, 229, 751, 772, 790, 1101
Hsp92II CATG 9 cut(s) 86, 243, 473, 641, 649, 1356, 1475, 1600, 2017
HspAI GCGC 1 cut(s) 40
Ksp22I TGATCA 1 cut(s) 1041
Kzo9I GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
LguI GCTCTTC 1 cut(s) 620
LmnI GCTCC 1 cut(s) 681
Lsp1109I GCAGC 9 cut(s) 284, 550, 1037, 1040, 1273, 1276, 1501, 1679, 1953
LweI GCATC 6 cut(s) 463, 725, 834, 1105, 1546, 1679
MaeI CTAG 6 cut(s) 18, 1136, 1280, 1304, 1508, 1770
MaeII ACGT 6 cut(s) 119, 229, 751, 772, 790, 1101
MaeIII GTNAC 7 cut(s) 22, 130, 146, 292, 776, 1097, 1102
MalI GATC 8 cut(s) 172, 599, 834, 1043, 1335, 1533, 1834, 1846
MbiI CCGCTC 1 cut(s) 55
MboI GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
MboII GAAGA 6 cut(s) 51, 637, 1402, 1646, 1920, 2030
MfeI CAATTG 1 cut(s) 692
MflI RGATCY 2 cut(s) 1531, 1844
MhlI GDGCHC 4 cut(s) 15, 388, 632, 1704
MlyI GAGTC 5 cut(s) 473, 487, 530, 773, 1241
MmeI TCCRAC 2 cut(s) 102, 1509
MroXI GAANNNNTTC 1 cut(s) 2022
MseI TTAA 7 cut(s) 282, 1295, 1820, 1875, 2034, 2060, 2089
MslI CAYNNNNRTG 1 cut(s) 1799
MspA1I CMGCKG 4 cut(s) 263, 275, 1031, 1964
MspI CCGG 1 cut(s) 297
MspR9I CCNGG 6 cut(s) 298, 408, 602, 843, 1078, 1841
MunI CAATTG 1 cut(s) 692
Mva1269I GAATGC 2 cut(s) 42, 543
MvaI CCWGG 5 cut(s) 408, 602, 843, 1078, 1841
MvnI CGCG 1 cut(s) 634
MwoI GCNNNNNNNGC 6 cut(s) 269, 1187, 1283, 1298, 1409, 1511
NciI CCSGG 1 cut(s) 298
NdeI CATATG 1 cut(s) 1377
NdeII GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
NlaIII CATG 9 cut(s) 86, 243, 473, 641, 649, 1356, 1475, 1600, 2017
NlaIV GGNNCC 3 cut(s) 677, 1657, 1973
NmuCI GTSAC 3 cut(s) 22, 776, 1097
NspI RCATGY 2 cut(s) 86, 649
PciSI GCTCTTC 1 cut(s) 620
PctI GAATGC 2 cut(s) 42, 543
PdmI GAANNNNTTC 1 cut(s) 2022
PfeI GAWTC 6 cut(s) 106, 190, 236, 257, 697, 859
PflFI GACNNNGTC 1 cut(s) 774
PflMI CCANNNNNTGG 1 cut(s) 1083
PfoI TCCNGGA 1 cut(s) 841
PkrI GCNGC 9 cut(s) 274, 565, 1027, 1030, 1288, 1291, 1516, 1669, 1943
PleI GAGTC 5 cut(s) 472, 487, 529, 772, 1240
PmaCI CACGTG 1 cut(s) 230
PmlI CACGTG 1 cut(s) 230
PpsI GAGTC 5 cut(s) 472, 487, 529, 772, 1240
Ppu21I YACGTR 2 cut(s) 230, 752
PshAI GACNNNNGTC 1 cut(s) 179
Psp6I CCWGG 5 cut(s) 406, 600, 841, 1076, 1839
PspCI CACGTG 1 cut(s) 230
PspEI GGTNACC 1 cut(s) 22
PspGI CCWGG 5 cut(s) 406, 600, 841, 1076, 1839
PspN4I GGNNCC 3 cut(s) 677, 1657, 1973
PspPI GGNCC 2 cut(s) 410, 1656
PstNI CAGNNNCTG 2 cut(s) 1031, 1673
PsuI RGATCY 2 cut(s) 1531, 1844
PsyI GACNNNGTC 1 cut(s) 774
PvuII CAGCTG 4 cut(s) 263, 275, 1031, 1964
RsaI GTAC 4 cut(s) 118, 316, 351, 559
RsaNI GTAC 4 cut(s) 117, 315, 350, 558
RseI CAYNNNNRTG 1 cut(s) 1799
SapI GCTCTTC 1 cut(s) 620
SaqAI TTAA 7 cut(s) 282, 1295, 1820, 1875, 2034, 2060, 2089
SatI GCNGC 9 cut(s) 273, 564, 1026, 1029, 1287, 1290, 1515, 1668, 1942
Sau3AI GATC 8 cut(s) 170, 597, 832, 1041, 1333, 1531, 1832, 1844
Sau96I GGNCC 2 cut(s) 410, 1656
SchI GAGTC 5 cut(s) 473, 487, 530, 773, 1241
ScrFI CCNGG 6 cut(s) 298, 408, 602, 843, 1078, 1841
SduI GDGCHC 4 cut(s) 15, 388, 632, 1704
SfaNI GCATC 6 cut(s) 463, 725, 834, 1105, 1546, 1679
SfcI CTRYAG 4 cut(s) 660, 888, 1003, 1465
SinI GGWCC 1 cut(s) 1656
SmiMI CAYNNNNRTG 1 cut(s) 1799
SnaBI TACGTA 1 cut(s) 752
SsiI CCGC 4 cut(s) 55, 904, 1171, 1997
SspI AATATT 1 cut(s) 996
SspMI CTAG 6 cut(s) 18, 1136, 1280, 1304, 1508, 1770
StyD4I CCNGG 6 cut(s) 296, 406, 600, 841, 1076, 1839
StyI CCWWGG 4 cut(s) 1279, 1717, 1896, 1976
TaaI ACNGT 3 cut(s) 892, 917, 1455
TaiI ACGT 6 cut(s) 122, 232, 754, 775, 793, 1104
TaqI TCGA 3 cut(s) 173, 686, 767
TfiI GAWTC 6 cut(s) 106, 190, 236, 257, 697, 859
Tru1I TTAA 7 cut(s) 282, 1295, 1820, 1875, 2034, 2060, 2089
Tru9I TTAA 7 cut(s) 282, 1295, 1820, 1875, 2034, 2060, 2089
TscAI CASTG 4 cut(s) 192, 600, 1192, 1431
TseFI GTSAC 3 cut(s) 22, 776, 1097
TseI GCWGC 9 cut(s) 272, 563, 1025, 1028, 1286, 1289, 1514, 1667, 1941
Tsp45I GTSAC 3 cut(s) 22, 776, 1097
TspGWI ACGGA 2 cut(s) 302, 1534
TspRI CASTG 4 cut(s) 192, 600, 1192, 1431
Tth111I GACNNNGTC 1 cut(s) 774
Van91I CCANNNNNTGG 1 cut(s) 1083
VpaK11BI GGWCC 1 cut(s) 1656
XapI RAATTY 2 cut(s) 960, 1249
XbaI TCTAGA 1 cut(s) 1507
XceI RCATGY 2 cut(s) 86, 649
XmaJI CCTAGG 1 cut(s) 1279
XmiI GTMKAC 1 cut(s) 727
XmnI GAANNNNTTC 1 cut(s) 2022
XspI CTAG 6 cut(s) 18, 1136, 1280, 1304, 1508, 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.