Rmu_sc0007977.1_g000013

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007977.1
OG0000877
Physical Location & Seq
Forward (+)
52695 .. 69572
16878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007977.1_g000013.1.cds

Sequence Viewer

Length: 2046 bp
atgctaaactatcagctttgctacctcatggaggtgcttcatgtgttcttctcgtttcttggagaagaccaggatgtcatctatgtagacaacgcagaactccgccacatgcttgaagatgtttccggccgatacctcgaagccctcacctccgccgacgcaaaccggcttgtcttcaaactcaccgattccgactcgctcggcgaccacgacgccgaccgagtctactccgagttgctccgccgcgtggagtcgttcatatgcgaagaagctgaggataatgggaaggaccaggcctatagagtcgtcgtcgtactctgcattgccgtagctgccttacttgctttcactcagtctaacctaaccggacctttggaggggctgccaaggtgtccgttgccagtggaagtgcccttatgtgatgagtgggacagttgggcgcggaatcagcttatggctgctggctctgacgtgcttggaaaggtctataatattcagggatcgacacttgtctcagtgattcatctggaagctggaatgatggaatacatctatgcacatgttgattcctgcaggttgcattttgaatcagctgaagcagcggctggtgttaagctttcagttaccggggttcttggcttccgtaccatacatcaggtaatgttgaatgtgtggagatctttttattatttacgctcagattcacttcttacctttggacatcatttctttggtaaaggtcgaaccaaaggcacaaatgagaatgagagcgattctggagttatatcagacggcattcaagttggtggtactgctgctgaccctttgagtgcaatccatcaggcagtgatcctagctaaatgccttcaaattgagaagagcacgcgacatgatgacatgcagagatgggaaatggctccatacatcgaggcaattgattctcagctatcatcatattttattatacgacgatgctgtgatgtcctacgtattcggtgggagtcgacacgtagtcacacaaaggaacgtgcattgatgatgatggaaacatcggttcagggtatcaaggagccctctccaggagtggcagacaggattcctttctgctatgggatttatatccctacagtttcagccttgcggaaggaatatggtgaactttgtgtccgctgtggtctgataggagaggcagtcaaaatttttgaggacttggaattatgggataatctgatattctgctatagattgagtcatgtgagatatcatattaaaaacagcctattggagaaaaaagcagcagccgttgaactgatcaagacacggctttctgaaacacctaatgaccccaggttatggcagtctgcaatggcgttgaattctctgtatcctgatggctggtttgccctaggggctgctgcattaaaggctctagaagctacatggaaggtgttggatcttactaataataagagaattgatgctgagttattggaaagaattatcacaggggtggaaagcatggcttcacctactaattcagcaatgactgatgatggtaactttcccgtcagtgggaccacaaatgcagaatctgatgtgggaaaatctcgggaagctgagcacttagtagagtttcttggaaaagttctacaacagatagtccgaagtggaaatggagcagatatttggggcatgtatgctagatggcaaaaaataaaaggagaccttgcgatgtgcagagaagcttggttaaagcaagtcagatcataccagggagctgatttgtggaaagatagagatcggtttaaaaagtttgcaaaatcctccttggaactctgcaaggtgtatatggagatttcttcgtctactggcagccgtgatgaacttctctcagctgaaaggcacctaaggaacataattaaacaggcaagatacttggcatttcagaaagcggggagtttctcagacatggaagaacttcaacatcttaaagcctgccttgatgaagtgaagttaaatcttgattctgatagtgcatctacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

681

Amino Acids

76.62

Weight (kDa)

5.47

Isoelectric Point (pI)

36.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
Acc36I ACCTGC 1 cut(s) 564
AccB1I GGYRCC 1 cut(s) 1902
AccB7I CCANNNNNTGG 1 cut(s) 1353
AccI GTMKAC 4 cut(s) 87, 225, 1004, 1865
AccII CGCG 3 cut(s) 246, 442, 886
AciI CCGC 9 cut(s) 103, 153, 241, 244, 442, 602, 1141, 1168, 1952
AclWI GGATC 3 cut(s) 508, 844, 1461
AcoI YGGCCR 1 cut(s) 127
AcsI RAATTY 2 cut(s) 1197, 1375
AcuI CTGAAG 1 cut(s) 615
AcyI GRCGYC 1 cut(s) 213
AfaI GTAC 3 cut(s) 315, 646, 811
AfiI CCNNNNNNNGG 7 cut(s) 31, 247, 377, 1079, 1353, 1571, 1572
AflIII ACRYGT 2 cut(s) 559, 1007
AgsI TTSAA 9 cut(s) 116, 178, 587, 667, 800, 869, 1307, 1375, 1982
AhdI GACNNNNNGTC 1 cut(s) 1011
AjiI CACGTC 1 cut(s) 472
AjnI CCWGG 5 cut(s) 69, 291, 1078, 1346, 1770
AleI CACNNNNGTG 1 cut(s) 1508
AloI GAACNNNNNNTCC 2 cut(s) 1149, 1181
Alw21I GWGCWC 2 cut(s) 884, 1623
Alw26I GTCTC 2 cut(s) 517, 1716
AlwI GGATC 3 cut(s) 508, 844, 1461
AlwNI CAGNNNCTG 2 cut(s) 605, 1592
Ama87I CYCGRG 1 cut(s) 1608
AoxI GGCC 2 cut(s) 127, 294
ApoI RAATTY 2 cut(s) 1197, 1375
Asp700I GAANNNNTTC 1 cut(s) 1977
AspA2I CCTAGG 1 cut(s) 1405
AspLEI GCGC 1 cut(s) 442
AspS9I GGNCC 3 cut(s) 289, 368, 1575
AsuC2I CCSGG 1 cut(s) 628
AsuHPI GGTGA 4 cut(s) 139, 175, 1166, 1518
AvaI CYCGRG 1 cut(s) 1608
AvaII GGWCC 3 cut(s) 289, 368, 1575
AvrII CCTAGG 1 cut(s) 1405
AxyI CCTNAGG 1 cut(s) 1907
BaeGI GKGCMC 1 cut(s) 414
BanI GGYRCC 1 cut(s) 1902
BanII GRGCYC 1 cut(s) 1074
BbsI GAAGAC 2 cut(s) 72, 166
Bbv12I GWGCWC 2 cut(s) 884, 1623
BbvCI CCTCAGC 1 cut(s) 273
BccI CCATC 7 cut(s) 535, 846, 900, 1036, 1385, 1547, 1698
BceAI ACGGC 5 cut(s) 311, 808, 1286, 1337, 1860
BciT130I CCWGG 5 cut(s) 71, 293, 1080, 1348, 1772
BciVI GTATCC 1 cut(s) 1395
BclI TGATCA 1 cut(s) 1311
BcnI CCSGG 1 cut(s) 628
BcoDI GTCTC 2 cut(s) 517, 1716
BfaI CTAG 4 cut(s) 854, 1406, 1430, 1701
BfmI CTRYAG 4 cut(s) 298, 571, 1125, 1240
BfuAI ACCTGC 1 cut(s) 564
BfuI GTATCC 1 cut(s) 1395
BglI GCCNNNNNGGC 1 cut(s) 1409
BglII AGATCT 1 cut(s) 677
BlnI CCTAGG 1 cut(s) 1405
BlpI GCTNAGC 1 cut(s) 1617
Bme1390I CCNGG 6 cut(s) 71, 293, 628, 1080, 1348, 1772
Bme18I GGWCC 3 cut(s) 289, 368, 1575
BmeRI GACNNNNNGTC 1 cut(s) 1011
BmeT110I CYCGRG 1 cut(s) 1608
BmgBI CACGTC 1 cut(s) 472
BmgT120I GGNCC 3 cut(s) 289, 368, 1575
BmiI GGNNCC 4 cut(s) 918, 1071, 1576, 1904
BmrFI CCNGG 6 cut(s) 71, 293, 628, 1080, 1348, 1772
BmsI GCATC 2 cut(s) 962, 1468
BoxI GACNNNNGTC 1 cut(s) 509
BpiI GAAGAC 2 cut(s) 72, 166
BpmI CTGGAG 2 cut(s) 798, 1062
Bpu10I CCTNAGC 1 cut(s) 273
Bpu1102I GCTNAGC 1 cut(s) 1617
BpuMI CCSGG 1 cut(s) 628
BsaAI YACGTR 2 cut(s) 989, 1010
BsaBI GATNNNNATC 2 cut(s) 1118, 1797
BsaHI GRCGYC 1 cut(s) 213
BsaI GGTCTC 1 cut(s) 1716
BsaJI CCNNGG 6 cut(s) 386, 627, 1346, 1405, 1771, 1827
BsaWI WCCGGW 1 cut(s) 365
BsaXI ACNNNNNCTCC 2 cut(s) 1176, 1206
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 247, 377, 1079, 1353, 1571, 1572
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 2 cut(s) 401, 1873
Bse21I CCTNAGG 1 cut(s) 1907
Bse3DI GCAATG 3 cut(s) 321, 1371, 1548
Bse8I GATNNNNATC 2 cut(s) 1118, 1797
BseBI CCWGG 5 cut(s) 71, 293, 1080, 1348, 1772
BseDI CCNNGG 6 cut(s) 386, 627, 1346, 1405, 1771, 1827
BseGI GGATG 1 cut(s) 79
BseJI GATNNNNATC 2 cut(s) 1118, 1797
BseLI CCNNNNNNNGG 7 cut(s) 31, 247, 377, 1079, 1353, 1571, 1572
BseMI GCAATG 3 cut(s) 321, 1371, 1548
BseMII CTCAG 9 cut(s) 264, 365, 528, 711, 956, 1473, 1608, 1905, 1977
BseNI ACTGG 2 cut(s) 401, 1873
BseSI GKGCMC 1 cut(s) 414
BseX3I CGGCCG 1 cut(s) 127
BsgI GTGCAG 1 cut(s) 1756
Bsh1236I CGCG 3 cut(s) 246, 442, 886
Bsh1285I CGRYCG 2 cut(s) 130, 220
BshFI GGCC 2 cut(s) 129, 296
BshNI GGYRCC 1 cut(s) 1902
BsiEI CGRYCG 2 cut(s) 130, 220
BsiHKAI GWGCWC 2 cut(s) 884, 1623
BsiHKCI CYCGRG 1 cut(s) 1608
BsiSI CCGG 4 cut(s) 126, 166, 366, 627
BslFI GGGAC 2 cut(s) 443, 1588
BslI CCNNNNNNNGG 7 cut(s) 31, 247, 377, 1079, 1353, 1571, 1572
BsmAI GTCTC 2 cut(s) 517, 1716
BsmFI GGGAC 2 cut(s) 443, 1588
BsmI GAATGC 1 cut(s) 795
BsnI GGCC 2 cut(s) 129, 296
Bso31I GGTCTC 1 cut(s) 1716
BsoBI CYCGRG 1 cut(s) 1608
Bsp1286I GDGCHC 4 cut(s) 414, 884, 1074, 1623
Bsp143I GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
Bsp1720I GCTNAGC 1 cut(s) 1617
BspACI CCGC 9 cut(s) 103, 153, 241, 244, 442, 602, 1141, 1168, 1952
BspANI GGCC 2 cut(s) 129, 296
BspCNI CTCAG 9 cut(s) 265, 364, 527, 710, 955, 1474, 1609, 1904, 1976
BspFNI CGCG 3 cut(s) 246, 442, 886
BspLI GGNNCC 4 cut(s) 918, 1071, 1576, 1904
BspMAI CTGCAG 1 cut(s) 575
BspMI ACCTGC 1 cut(s) 564
BspPI GGATC 3 cut(s) 508, 844, 1461
BspQI GCTCTTC 1 cut(s) 872
BspT107I GGYRCC 1 cut(s) 1902
BspTNI GGTCTC 1 cut(s) 1716
BsrDI GCAATG 3 cut(s) 321, 1371, 1548
BsrFI RCCGGY 1 cut(s) 165
BsrI ACTGG 2 cut(s) 401, 1873
BssAI RCCGGY 1 cut(s) 165
BssECI CCNNGG 6 cut(s) 386, 627, 1346, 1405, 1771, 1827
BssMI GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
BssNI GRCGYC 1 cut(s) 213
BssT1I CCWWGG 3 cut(s) 386, 1405, 1827
Bst2UI CCWGG 5 cut(s) 71, 293, 1080, 1348, 1772
Bst4CI ACNGT 2 cut(s) 434, 1129
Bst6I CTCTTC 1 cut(s) 872
BstACI GRCGYC 1 cut(s) 213
BstBAI YACGTR 2 cut(s) 989, 1010
BstC8I GCNNGC 3 cut(s) 463, 884, 1996
BstENI CCTNNNNNAGG 1 cut(s) 29
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 3 cut(s) 246, 442, 886
BstHHI GCGC 1 cut(s) 442
BstKTI GATC 7 cut(s) 503, 680, 852, 1314, 1456, 1766, 1801
BstMAI GTCTC 2 cut(s) 517, 1716
BstMBI GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
BstMCI CGRYCG 2 cut(s) 130, 220
BstMWI GCNNNNNNNGC 7 cut(s) 332, 341, 448, 599, 1409, 1424, 1433
BstNI CCWGG 5 cut(s) 71, 293, 1080, 1348, 1772
BstNSI RCATGY 4 cut(s) 112, 563, 901, 1696
BstPAI GACNNNNGTC 1 cut(s) 509
BstSCI CCNGG 6 cut(s) 69, 291, 626, 1078, 1346, 1770
BstSFI CTRYAG 4 cut(s) 298, 571, 1125, 1240
BstSLI GKGCMC 1 cut(s) 414
BstSNI TACGTA 1 cut(s) 989
BstUI CGCG 3 cut(s) 246, 442, 886
BstV2I GAAGAC 2 cut(s) 72, 166
BstX2I RGATCY 2 cut(s) 677, 1453
BstYI RGATCY 2 cut(s) 677, 1453
BstZI CGGCCG 1 cut(s) 127
Bsu36I CCTNAGG 1 cut(s) 1907
BsuI GTATCC 1 cut(s) 1395
BsuRI GGCC 2 cut(s) 129, 296
BtgZI GCGATG 1 cut(s) 1745
BtrI CACGTC 1 cut(s) 472
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 852
BtsIMutI CAGTG 4 cut(s) 408, 522, 852, 1576
BveI ACCTGC 1 cut(s) 564
Cac8I GCNNGC 3 cut(s) 463, 884, 1996
CaiI CAGNNNCTG 2 cut(s) 605, 1592
CfoI GCGC 1 cut(s) 442
Cfr10I RCCGGY 1 cut(s) 165
Cfr13I GGNCC 3 cut(s) 289, 368, 1575
CseI GACGC 2 cut(s) 167, 221
Csp6I GTAC 3 cut(s) 314, 645, 810
CviQI GTAC 3 cut(s) 314, 645, 810
DpnI GATC 7 cut(s) 502, 679, 851, 1313, 1455, 1765, 1800
DpnII GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
DraI TTTAAA 1 cut(s) 1807
DrdI GACNNNNNNGTC 1 cut(s) 74
DriI GACNNNNNGTC 1 cut(s) 1011
DseDI GACNNNNNNGTC 1 cut(s) 74
EaeI YGGCCR 1 cut(s) 127
EagI CGGCCG 1 cut(s) 127
Eam1104I CTCTTC 1 cut(s) 872
Eam1105I GACNNNNNGTC 1 cut(s) 1011
EarI CTCTTC 1 cut(s) 872
EciI GGCGGA 3 cut(s) 92, 142, 230
EclXI CGGCCG 1 cut(s) 127
Eco105I TACGTA 1 cut(s) 989
Eco130I CCWWGG 3 cut(s) 386, 1405, 1827
Eco147I AGGCCT 1 cut(s) 296
Eco24I GRGCYC 1 cut(s) 1074
Eco31I GGTCTC 1 cut(s) 1716
Eco32I GATATC 1 cut(s) 1262
Eco47I GGWCC 3 cut(s) 289, 368, 1575
Eco52I CGGCCG 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 615
Eco81I CCTNAGG 1 cut(s) 1907
Eco88I CYCGRG 1 cut(s) 1608
EcoNI CCTNNNNNAGG 1 cut(s) 29
EcoRI GAATTC 1 cut(s) 1375
EcoRII CCWGG 5 cut(s) 69, 291, 1078, 1346, 1770
EcoRV GATATC 1 cut(s) 1262
EcoT14I CCWWGG 3 cut(s) 386, 1405, 1827
EcoT38I GRGCYC 1 cut(s) 1074
ErhI CCWWGG 3 cut(s) 386, 1405, 1827
FalI AAGNNNNNCTT 6 cut(s) 1507, 1539, 1710, 1742, 1983, 2015
FaqI GGGAC 2 cut(s) 443, 1588
FauI CCCGC 1 cut(s) 1945
FauNDI CATATG 1 cut(s) 260
FbaI TGATCA 1 cut(s) 1311
FblI GTMKAC 4 cut(s) 87, 225, 1004, 1865
FokI GGATG 1 cut(s) 86
FriOI GRGCYC 1 cut(s) 1074
FspBI CTAG 4 cut(s) 854, 1406, 1430, 1701
GlaI GCGC 1 cut(s) 441
GsuI CTGGAG 2 cut(s) 798, 1062
HaeIII GGCC 2 cut(s) 129, 296
HapII CCGG 4 cut(s) 126, 166, 366, 627
HgaI GACGC 2 cut(s) 167, 221
HhaI GCGC 1 cut(s) 442
Hin1I GRCGYC 1 cut(s) 213
Hin6I GCGC 1 cut(s) 440
HinP1I GCGC 1 cut(s) 440
HincII GTYRAC 1 cut(s) 1005
HindII GTYRAC 1 cut(s) 1005
HindIII AAGCTT 2 cut(s) 614, 1743
HpaII CCGG 4 cut(s) 126, 166, 366, 627
HphI GGTGA 4 cut(s) 139, 175, 1166, 1518
Hpy166II GTNNAC 5 cut(s) 88, 226, 1005, 1157, 1866
Hpy188III TCNNGA 7 cut(s) 527, 777, 1315, 1388, 1430, 1610, 2021
Hpy8I GTNNAC 5 cut(s) 88, 226, 1005, 1157, 1866
Hpy99I CGWCG 5 cut(s) 161, 215, 311, 314, 972
HpyAV CCTTC 4 cut(s) 280, 875, 1138, 1438
HpyCH4III ACNGT 2 cut(s) 434, 1129
HpyCH4IV ACGT 4 cut(s) 471, 988, 1009, 1027
HpyF10VI GCNNNNNNNGC 7 cut(s) 332, 341, 448, 599, 1409, 1424, 1433
HpySE526I ACGT 4 cut(s) 471, 988, 1009, 1027
Hsp92I GRCGYC 1 cut(s) 213
HspAI GCGC 1 cut(s) 440
Ksp22I TGATCA 1 cut(s) 1311
Kzo9I GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
LguI GCTCTTC 1 cut(s) 872
LmnI GCTCC 5 cut(s) 243, 922, 1069, 1676, 1775
LweI GCATC 2 cut(s) 962, 1468
MaeI CTAG 4 cut(s) 854, 1406, 1430, 1701
MaeII ACGT 4 cut(s) 471, 988, 1009, 1027
MaeIII GTNAC 3 cut(s) 622, 1013, 1556
MalI GATC 7 cut(s) 502, 679, 851, 1313, 1455, 1765, 1800
MboI GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
MboII GAAGA 8 cut(s) 40, 77, 128, 166, 278, 889, 1851, 1985
MfeI CAATTG 1 cut(s) 933
MflI RGATCY 2 cut(s) 677, 1453
MhlI GDGCHC 4 cut(s) 414, 884, 1074, 1623
MluCI AATT 9 cut(s) 870, 933, 1197, 1214, 1375, 1473, 1497, 1534, 1917
MlyI GAGTC 6 cut(s) 188, 231, 260, 312, 1010, 1258
MmeI TCCRAC 2 cut(s) 216, 1431
MroXI GAANNNNTTC 1 cut(s) 1977
MseI TTAA 9 cut(s) 612, 1269, 1421, 1751, 1806, 1920, 1989, 2015, 2044
MslI CAYNNNNRTG 2 cut(s) 32, 1508
MspA1I CMGCKG 4 cut(s) 593, 602, 1170, 1895
MspI CCGG 4 cut(s) 126, 166, 366, 627
MspR9I CCNGG 6 cut(s) 71, 293, 628, 1080, 1348, 1772
MunI CAATTG 1 cut(s) 933
Mva1269I GAATGC 1 cut(s) 795
MvaI CCWGG 5 cut(s) 71, 293, 1080, 1348, 1772
MvnI CGCG 3 cut(s) 246, 442, 886
MwoI GCNNNNNNNGC 7 cut(s) 332, 341, 448, 599, 1409, 1424, 1433
NciI CCSGG 1 cut(s) 628
NdeI CATATG 1 cut(s) 260
NdeII GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
NlaIV GGNNCC 4 cut(s) 918, 1071, 1576, 1904
NmeAIII GCCGAG 1 cut(s) 180
NmuCI GTSAC 1 cut(s) 1013
NspI RCATGY 4 cut(s) 112, 563, 901, 1696
OliI CACNNNNGTG 1 cut(s) 1508
PceI AGGCCT 1 cut(s) 296
PciI ACATGT 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 872
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PctI GAATGC 1 cut(s) 795
PdmI GAANNNNTTC 1 cut(s) 1977
PflFI GACNNNGTC 1 cut(s) 221
PflMI CCANNNNNTGG 1 cut(s) 1353
PfoI TCCNGGA 1 cut(s) 1078
PleI GAGTC 6 cut(s) 188, 230, 259, 311, 1009, 1257
PpsI GAGTC 6 cut(s) 188, 230, 259, 311, 1009, 1257
Ppu21I YACGTR 2 cut(s) 989, 1010
PscI ACATGT 1 cut(s) 559
PshAI GACNNNNGTC 1 cut(s) 509
Psp6I CCWGG 5 cut(s) 69, 291, 1078, 1346, 1770
PspGI CCWGG 5 cut(s) 69, 291, 1078, 1346, 1770
PspN4I GGNNCC 4 cut(s) 918, 1071, 1576, 1904
PspPI GGNCC 3 cut(s) 289, 368, 1575
PstI CTGCAG 1 cut(s) 575
PstNI CAGNNNCTG 2 cut(s) 605, 1592
PsuI RGATCY 2 cut(s) 677, 1453
PsyI GACNNNGTC 1 cut(s) 221
PvuII CAGCTG 2 cut(s) 593, 1895
RsaI GTAC 3 cut(s) 315, 646, 811
RsaNI GTAC 3 cut(s) 314, 645, 810
RseI CAYNNNNRTG 2 cut(s) 32, 1508
SalI GTCGAC 1 cut(s) 1003
SapI GCTCTTC 1 cut(s) 872
SaqAI TTAA 9 cut(s) 612, 1269, 1421, 1751, 1806, 1920, 1989, 2015, 2044
Sau3AI GATC 7 cut(s) 500, 677, 849, 1311, 1453, 1763, 1798
Sau96I GGNCC 3 cut(s) 289, 368, 1575
SbfI CCTGCAGG 1 cut(s) 575
SchI GAGTC 6 cut(s) 188, 231, 260, 312, 1010, 1258
ScrFI CCNGG 6 cut(s) 71, 293, 628, 1080, 1348, 1772
SdaI CCTGCAGG 1 cut(s) 575
SduI GDGCHC 4 cut(s) 414, 884, 1074, 1623
SfaNI GCATC 2 cut(s) 962, 1468
SfcI CTRYAG 4 cut(s) 298, 571, 1125, 1240
SinI GGWCC 3 cut(s) 289, 368, 1575
SmiMI CAYNNNNRTG 2 cut(s) 32, 1508
SnaBI TACGTA 1 cut(s) 989
Sse8387I CCTGCAGG 1 cut(s) 575
Sse9I AATT 9 cut(s) 870, 933, 1197, 1214, 1375, 1473, 1497, 1534, 1917
SseBI AGGCCT 1 cut(s) 296
SsiI CCGC 9 cut(s) 103, 153, 241, 244, 442, 602, 1141, 1168, 1952
SspI AATATT 1 cut(s) 493
SspMI CTAG 4 cut(s) 854, 1406, 1430, 1701
StuI AGGCCT 1 cut(s) 296
StyD4I CCNGG 6 cut(s) 69, 291, 626, 1078, 1346, 1770
StyI CCWWGG 3 cut(s) 386, 1405, 1827
TaaI ACNGT 2 cut(s) 434, 1129
TaiI ACGT 4 cut(s) 474, 991, 1012, 1030
TaqI TCGA 5 cut(s) 138, 503, 742, 927, 1004
TaqII GACCGA 1 cut(s) 234
TasI AATT 9 cut(s) 870, 933, 1197, 1214, 1375, 1473, 1497, 1534, 1917
TauI GCSGC 2 cut(s) 246, 605
Tru1I TTAA 9 cut(s) 612, 1269, 1421, 1751, 1806, 1920, 1989, 2015, 2044
Tru9I TTAA 9 cut(s) 612, 1269, 1421, 1751, 1806, 1920, 1989, 2015, 2044
TscAI CASTG 4 cut(s) 408, 522, 852, 1576
TseFI GTSAC 1 cut(s) 1013
Tsp45I GTSAC 1 cut(s) 1013
TspDTI ATGAA 5 cut(s) 29, 247, 512, 1896, 2019
TspGWI ACGGA 2 cut(s) 384, 632
TspRI CASTG 4 cut(s) 408, 522, 852, 1576
Tth111I GACNNNGTC 1 cut(s) 221
Van91I CCANNNNNTGG 1 cut(s) 1353
VpaK11BI GGWCC 3 cut(s) 289, 368, 1575
XagI CCTNNNNNAGG 1 cut(s) 29
XapI RAATTY 2 cut(s) 1197, 1375
XbaI TCTAGA 1 cut(s) 1429
XceI RCATGY 4 cut(s) 112, 563, 901, 1696
XmaJI CCTAGG 1 cut(s) 1405
XmiI GTMKAC 4 cut(s) 87, 225, 1004, 1865
XmnI GAANNNNTTC 1 cut(s) 1977
XspI CTAG 4 cut(s) 854, 1406, 1430, 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.