Rw0G001090

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00036
OG0000877
Physical Location & Seq
Forward (+)
45506 .. 55049
9544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G001090.1

Sequence Viewer

Length: 2733 bp
ATGTCTGAACCGTCGCCGGACCTGGCTATCCTCCGCCGCTACGAGCTCCGTCTCCTCCGCTGCACCTTCCTCTCTCCTCCTCCGCCGTCCGATCCTGAACAACCGTCCGATCAAACCTCGCCCACTCACCCCCTCTCCCCTCTAATCTCCACCCTCCTCACTTCCATCGAGTCCGGCCGATACCTCGAAGCCCTCACCTCCGCCGACGCAAACCGACTCGTCTTCAAACTCACCGATTCCGACTCGCTCGACGACCCCGACCGAGTCTACTCCGATTTGCTCTGCCGCGTGGAGTCGTTCATATGCGAAGAAGCTGAGGATAGTGGCAAGGACCAGGCCTATAGAGTCGTCGTCGTACTCTGCATTGCCGTAGCTGCCTTACTTGCTTTCACTCAGTCTAACCTAACCGGACCTTTGGAGGGGCTGCCAAGGTGTCCGTTGCCAATGGAAGTGCCCTTATGTGATGAATGGGACAATTGGGCGCGGAATCAGCTTATGGCTGCTGGCTCTGACTTGCTTGGAAAGGTCTATAATATTCAGTATATAATTTATGCAAAGATATTCGTCATGAAGATGAAAGATTTGTTATTTGAAGGAAGTTTGTCTTGTGCATATGGAATTAGGAGCCTTTCATGGTGGTTCGCTAGGGTCACCTTTCTCCATCAGCGCATTCTCGATGAGCGGTCTTCATCTCTGTTCGACCTTTTGCATGTCTTTACAAGTGAAACTTTGAATCATTTTGGTACGTTGGAGAAAGTAACAAGTTATTGGGGTAACGATTTGCGTAATGGCGAGGGATCGACACTCGTCTCAGTGATTCATCTGGAAGCTGGAATGATGGAATACATCTATGCACGTGTTGATTCATGCAGGTTGCATTTTGAATCAGCTGAAGCAGCAGCTGGTGTTAAGCTTTCAGTTACAGGGGTTCTTGGCTTCCGTACTATACATCAGGTTGAACCAAAGGCACAAATGGTACTTTTAGCAAACACAACTTCATCAAAGAGTGGGGCTCTCTGTTCCTCTGAAAGCCCTGGCCCTCATAGATATGATTCTATTGGCAGAAATGATATATCTAAGCATCCATCTGAGTCCCATGAGGCTTCTGATATATTATTGACTCCAAGATTGGTAGAGAATGAGAGCGATTCTGGAGTTATATCAGACGGCATTCAAGTTGGTGGTACTGCTGCTGACCCTTTGAGTGCAATCCAGCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAAAGCACACGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGAGACGTAGTCACACAAAGGAACGTGCATTGACGATGATGGAAACATTGGTTCAGGGCATCAATGATCCCTCTCCAGGAGTGGTAGACAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGAGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTAATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCGTTGGGTGACGTTACTAATGATGATACCTGCTTTGAAAAAGCCCTAGAAGTTTCAAACAATAGGTCGGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCTTACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGGAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTCGCCCTAGGGGCTGCTGCATTAAAGGATAGGGATATTGAGAAGGCACTAGATGGCTTTACACGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCCTGTTTGCATATGATAAAAGGGAAGAGTAAAGAAGCTTTCATTGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGCTATCAACTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTGCACGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGGTGAGTTATTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTAATTCAGCAATGACTGATGATGAAGATAACTTTCTCATTTGTGGGACCACAAATGCAGCATCTGAGGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTCCTTGGAAAAGTTCTACAACAGATAGTTCGGAGTGGAAATGGAACAGATATTTGGGGCTTGTATGCTAGATGGCAAAAAATGAAAGGAGACCTCTCAATGTGCAGAGAAGCTTGGTTAAAGCAAGTCAGATCATACCAGGGATCTGATTTGTGGAAAGATAGAGATCGGTTTAAAAAGTTTGCGAAATCCTCCTTGGAACTCTGCAAGGTATATATGGAGATTTCTTCATCTACTGGCAGCCGTGATGAACTTCTCTCAGCTGAAAGGCACCTAAGGAACATAATGAAACAGGCGGGGAGTTTCGCAGACATGGAAGAACTTCAACATCTTAAAGCCTGCCTTGATGAAGTGAAGTTAAAACTTGATTGTGATAGTGTGTCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

910

Amino Acids

102.08

Weight (kDa)

5.36

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 861, 1739
AccB1I GGYRCC 1 cut(s) 2613
AccB7I CCANNNNNTGG 1 cut(s) 1695
AccBSI CCGCTC 1 cut(s) 682
AccI GTMKAC 3 cut(s) 267, 1464, 2726
AccII CGCG 2 cut(s) 288, 484
AclWI GGATC 7 cut(s) 86, 805, 1219, 1439, 1958, 2169, 2494
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 2 cut(s) 1572, 1861
AcuI CTGAAG 2 cut(s) 912, 2078
AcvI CACGTG 1 cut(s) 857
AdeI CACNNNGTG 1 cut(s) 1799
AfaI GTAC 5 cut(s) 357, 745, 943, 978, 1186
AfiI CCNNNNNNNGG 4 cut(s) 419, 1454, 1695, 1973
AflIII ACRYGT 1 cut(s) 856
AjnI CCWGG 7 cut(s) 21, 333, 1033, 1227, 1453, 1688, 2481
AjuI GAANNNNNNNTTGG 4 cut(s) 2380, 2412, 2522, 2554
AloI GAACNNNNNNTCC 2 cut(s) 1524, 1556
Alw21I GWGCWC 2 cut(s) 48, 2334
Alw26I GTCTC 5 cut(s) 56, 814, 1375, 1791, 2427
AlwI GGATC 7 cut(s) 86, 805, 1219, 1439, 1958, 2169, 2494
AlwNI CAGNNNCTG 3 cut(s) 902, 1643, 2303
Ama87I CYCGRG 2 cut(s) 1773, 2319
AoxI GGCC 4 cut(s) 175, 336, 1036, 1854
ApoI RAATTY 2 cut(s) 1572, 1861
ArsI GACNNNNNNTTYG 2 cut(s) 1751, 1783
Asp700I GAANNNNTTC 1 cut(s) 2664
AspA2I CCTAGG 1 cut(s) 1891
AspLEI GCGC 2 cut(s) 484, 669
AspS9I GGNCC 5 cut(s) 19, 331, 410, 1037, 2286
AsuHPI GGTGA 8 cut(s) 119, 187, 223, 643, 1541, 1721, 2201, 2226
AvaI CYCGRG 2 cut(s) 1773, 2319
AvaII GGWCC 4 cut(s) 19, 331, 410, 2286
AvrII CCTAGG 1 cut(s) 1891
AxyI CCTNAGG 1 cut(s) 2618
BaeGI GKGCMC 1 cut(s) 456
BanI GGYRCC 1 cut(s) 2613
BanII GRGCYC 2 cut(s) 48, 1015
BbrPI CACGTG 1 cut(s) 857
BbsI GAAGAC 2 cut(s) 214, 678
Bbv12I GWGCWC 2 cut(s) 48, 2334
BbvCI CCTCAGC 1 cut(s) 315
BceAI ACGGC 5 cut(s) 70, 353, 1183, 1679, 2571
BciT130I CCWGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
BciVI GTATCC 1 cut(s) 1881
BclI TGATCA 1 cut(s) 1653
BcoDI GTCTC 5 cut(s) 56, 814, 1375, 1791, 2427
BfaI CTAG 6 cut(s) 645, 1748, 1892, 1934, 2138, 2412
BfmI CTRYAG 4 cut(s) 340, 1500, 1615, 2095
BfuAI ACCTGC 2 cut(s) 861, 1739
BfuI GTATCC 1 cut(s) 1881
BglI GCCNNNNNGGC 1 cut(s) 1895
BlnI CCTAGG 1 cut(s) 1891
BlpI GCTNAGC 2 cut(s) 1779, 2328
Bme1390I CCNGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
Bme18I GGWCC 4 cut(s) 19, 331, 410, 2286
BmeT110I CYCGRG 2 cut(s) 1773, 2319
BmgT120I GGNCC 5 cut(s) 19, 331, 410, 1037, 2286
BmiI GGNNCC 4 cut(s) 626, 1293, 2287, 2615
BmrFI CCNGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
BmsI GCATC 4 cut(s) 1090, 1337, 1446, 2309
BoxI GACNNNNGTC 1 cut(s) 806
BpiI GAAGAC 2 cut(s) 214, 678
BplI GAGNNNNNCTC 2 cut(s) 997, 1029
BpmI CTGGAG 2 cut(s) 1173, 1437
Bpu10I CCTNAGC 2 cut(s) 315, 2130
Bpu1102I GCTNAGC 2 cut(s) 1779, 2328
BpuEI CTTGAG 1 cut(s) 1534
BsaAI YACGTR 2 cut(s) 857, 1364
BsaBI GATNNNNATC 2 cut(s) 1493, 2508
BsaI GGTCTC 2 cut(s) 1791, 2427
BsaJI CCNNGG 7 cut(s) 428, 1033, 1688, 1891, 2347, 2482, 2538
BsaWI WCCGGW 1 cut(s) 407
BsaXI ACNNNNNCTCC 4 cut(s) 119, 149, 1551, 1581
Bsc4I CCNNNNNNNGG 4 cut(s) 419, 1454, 1695, 1973
Bse1I ACTGG 1 cut(s) 2584
Bse21I CCTNAGG 1 cut(s) 2618
Bse3DI GCAATG 5 cut(s) 363, 1857, 2037, 2128, 2256
Bse8I GATNNNNATC 2 cut(s) 1493, 2508
BseBI CCWGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
BseDI CCNNGG 7 cut(s) 428, 1033, 1688, 1891, 2347, 2482, 2538
BseGI GGATG 1 cut(s) 1081
BseJI GATNNNNATC 2 cut(s) 1493, 2508
BseLI CCNNNNNNNGG 4 cut(s) 419, 1454, 1695, 1973
BseMI GCAATG 5 cut(s) 363, 1857, 2037, 2128, 2256
BseMII CTCAG 9 cut(s) 306, 407, 825, 1080, 1331, 2144, 2295, 2319, 2616
BseNI ACTGG 1 cut(s) 2584
BseRI GAGGAG 4 cut(s) 44, 66, 69, 146
BseSI GKGCMC 1 cut(s) 456
BseX3I CGGCCG 1 cut(s) 175
BsgI GTGCAG 3 cut(s) 46, 2130, 2467
Bsh1236I CGCG 2 cut(s) 288, 484
Bsh1285I CGRYCG 2 cut(s) 178, 262
BshFI GGCC 4 cut(s) 177, 338, 1038, 1856
BshNI GGYRCC 1 cut(s) 2613
BsiEI CGRYCG 2 cut(s) 178, 262
BsiHKAI GWGCWC 2 cut(s) 48, 2334
BsiHKCI CYCGRG 2 cut(s) 1773, 2319
BsiSI CCGG 3 cut(s) 17, 174, 408
BslFI GGGAC 3 cut(s) 485, 1078, 2299
BslI CCNNNNNNNGG 4 cut(s) 419, 1454, 1695, 1973
BsmAI GTCTC 5 cut(s) 56, 814, 1375, 1791, 2427
BsmBI CGTCTC 3 cut(s) 56, 814, 1375
BsmFI GGGAC 3 cut(s) 485, 1078, 2299
BsmI GAATGC 2 cut(s) 669, 1170
BsnI GGCC 4 cut(s) 177, 338, 1038, 1856
Bso31I GGTCTC 2 cut(s) 1791, 2427
BsoBI CYCGRG 2 cut(s) 1773, 2319
Bsp1286I GDGCHC 4 cut(s) 48, 456, 1015, 2334
Bsp1720I GCTNAGC 2 cut(s) 1779, 2328
BspANI GGCC 4 cut(s) 177, 338, 1038, 1856
BspCNI CTCAG 9 cut(s) 307, 406, 824, 1081, 1330, 2143, 2296, 2320, 2615
BspFNI CGCG 2 cut(s) 288, 484
BspHI TCATGA 1 cut(s) 567
BspLI GGNNCC 4 cut(s) 626, 1293, 2287, 2615
BspMI ACCTGC 2 cut(s) 861, 1739
BspPI GGATC 7 cut(s) 86, 805, 1219, 1439, 1958, 2169, 2494
BspT107I GGYRCC 1 cut(s) 2613
BspTNI GGTCTC 2 cut(s) 1791, 2427
BsrBI CCGCTC 1 cut(s) 682
BsrDI GCAATG 5 cut(s) 363, 1857, 2037, 2128, 2256
BsrI ACTGG 1 cut(s) 2584
BssECI CCNNGG 7 cut(s) 428, 1033, 1688, 1891, 2347, 2482, 2538
BssT1I CCWWGG 4 cut(s) 428, 1891, 2347, 2538
Bst2UI CCWGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
Bst4CI ACNGT 5 cut(s) 12, 105, 1504, 1529, 2085
Bst6I CTCTTC 1 cut(s) 2015
BstAPI GCANNNNNTGC 1 cut(s) 1799
BstBAI YACGTR 2 cut(s) 857, 1364
BstC8I GCNNGC 4 cut(s) 505, 1218, 1795, 2683
BstEII GGTNACC 1 cut(s) 649
BstF5I GGATG 1 cut(s) 1081
BstFNI CGCG 2 cut(s) 288, 484
BstHHI GCGC 2 cut(s) 484, 669
BstMAI GTCTC 5 cut(s) 56, 814, 1375, 1791, 2427
BstMCI CGRYCG 2 cut(s) 178, 262
BstMWI GCNNNNNNNGC 8 cut(s) 374, 383, 490, 896, 1799, 1895, 2039, 2141
BstNI CCWGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
BstNSI RCATGY 2 cut(s) 713, 1276
BstPAI GACNNNNGTC 1 cut(s) 806
BstPI GGTNACC 1 cut(s) 649
BstSCI CCNGG 7 cut(s) 21, 333, 1033, 1227, 1453, 1688, 2481
BstSFI CTRYAG 4 cut(s) 340, 1500, 1615, 2095
BstSLI GKGCMC 1 cut(s) 456
BstSNI TACGTA 1 cut(s) 1364
BstUI CGCG 2 cut(s) 288, 484
BstV2I GAAGAC 2 cut(s) 214, 678
BstX2I RGATCY 2 cut(s) 2161, 2486
BstYI RGATCY 2 cut(s) 2161, 2486
BstZI CGGCCG 1 cut(s) 175
Bsu36I CCTNAGG 1 cut(s) 2618
BsuI GTATCC 1 cut(s) 1881
BsuRI GGCC 4 cut(s) 177, 338, 1038, 1856
BtsCI GGATG 1 cut(s) 1081
BtsI GCAGTG 2 cut(s) 1227, 1804
BtsIMutI CAGTG 4 cut(s) 819, 1227, 1804, 2054
BveI ACCTGC 2 cut(s) 861, 1739
Cac8I GCNNGC 4 cut(s) 505, 1218, 1795, 2683
CaiI CAGNNNCTG 3 cut(s) 902, 1643, 2303
CciI TCATGA 1 cut(s) 567
CfoI GCGC 2 cut(s) 484, 669
Cfr13I GGNCC 5 cut(s) 19, 331, 410, 1037, 2286
CseI GACGC 1 cut(s) 215
Csp6I GTAC 5 cut(s) 356, 744, 942, 977, 1185
CviQI GTAC 5 cut(s) 356, 744, 942, 977, 1185
DraI TTTAAA 1 cut(s) 2518
DraIII CACNNNGTG 1 cut(s) 1799
EaeI YGGCCR 1 cut(s) 175
EagI CGGCCG 1 cut(s) 175
Eam1104I CTCTTC 1 cut(s) 2015
EarI CTCTTC 1 cut(s) 2015
EciI GGCGGA 3 cut(s) 23, 72, 190
Ecl136II GAGCTC 1 cut(s) 46
EclXI CGGCCG 1 cut(s) 175
Eco105I TACGTA 1 cut(s) 1364
Eco130I CCWWGG 4 cut(s) 428, 1891, 2347, 2538
Eco147I AGGCCT 1 cut(s) 338
Eco24I GRGCYC 2 cut(s) 48, 1015
Eco31I GGTCTC 2 cut(s) 1791, 2427
Eco47I GGWCC 4 cut(s) 19, 331, 410, 2286
Eco52I CGGCCG 1 cut(s) 175
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 2 cut(s) 912, 2078
Eco72I CACGTG 1 cut(s) 857
Eco81I CCTNAGG 1 cut(s) 2618
Eco88I CYCGRG 2 cut(s) 1773, 2319
Eco91I GGTNACC 1 cut(s) 649
EcoICRI GAGCTC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 649
EcoRI GAATTC 1 cut(s) 1861
EcoRII CCWGG 7 cut(s) 21, 333, 1033, 1227, 1453, 1688, 2481
EcoT14I CCWWGG 4 cut(s) 428, 1891, 2347, 2538
EcoT38I GRGCYC 2 cut(s) 48, 1015
ErhI CCWWGG 4 cut(s) 428, 1891, 2347, 2538
Esp3I CGTCTC 3 cut(s) 56, 814, 1375
FalI AAGNNNNNCTT 8 cut(s) 589, 621, 712, 744, 2215, 2247, 2670, 2702
FaqI GGGAC 3 cut(s) 485, 1078, 2299
FauI CCCGC 1 cut(s) 2632
FauNDI CATATG 3 cut(s) 302, 613, 2007
FbaI TGATCA 1 cut(s) 1653
FblI GTMKAC 3 cut(s) 267, 1464, 2726
FokI GGATG 1 cut(s) 1068
FriOI GRGCYC 2 cut(s) 48, 1015
FspBI CTAG 6 cut(s) 645, 1748, 1892, 1934, 2138, 2412
GlaI GCGC 2 cut(s) 483, 668
GsuI CTGGAG 2 cut(s) 1173, 1437
HaeIII GGCC 4 cut(s) 177, 338, 1038, 1856
HapII CCGG 3 cut(s) 17, 174, 408
HgaI GACGC 1 cut(s) 215
HhaI GCGC 2 cut(s) 484, 669
Hin6I GCGC 2 cut(s) 482, 667
HinP1I GCGC 2 cut(s) 482, 667
HindIII AAGCTT 3 cut(s) 911, 2031, 2454
HpaII CCGG 3 cut(s) 17, 174, 408
HphI GGTGA 8 cut(s) 119, 187, 223, 643, 1541, 1721, 2201, 2226
Hpy166II GTNNAC 4 cut(s) 268, 1465, 1532, 2727
Hpy8I GTNNAC 4 cut(s) 268, 1465, 1532, 2727
Hpy99I CGWCG 6 cut(s) 16, 209, 254, 353, 356, 1347
HpyAV CCTTC 6 cut(s) 76, 587, 1250, 1513, 1921, 2146
HpyCH4III ACNGT 5 cut(s) 12, 105, 1504, 1529, 2085
HpyCH4IV ACGT 6 cut(s) 746, 856, 1363, 1384, 1402, 1713
HpyF10VI GCNNNNNNNGC 8 cut(s) 374, 383, 490, 896, 1799, 1895, 2039, 2141
HpySE526I ACGT 6 cut(s) 746, 856, 1363, 1384, 1402, 1713
HspAI GCGC 2 cut(s) 482, 667
Ksp22I TGATCA 1 cut(s) 1653
LmnI GCTCC 3 cut(s) 51, 624, 1297
LweI GCATC 4 cut(s) 1090, 1337, 1446, 2309
MaeI CTAG 6 cut(s) 645, 1748, 1892, 1934, 2138, 2412
MaeII ACGT 6 cut(s) 746, 856, 1363, 1384, 1402, 1713
MaeIII GTNAC 7 cut(s) 649, 757, 773, 919, 1388, 1709, 1714
MbiI CCGCTC 1 cut(s) 682
MboII GAAGA 8 cut(s) 214, 320, 583, 678, 2032, 2276, 2562, 2672
MfeI CAATTG 2 cut(s) 475, 1308
MflI RGATCY 2 cut(s) 2161, 2486
MhlI GDGCHC 4 cut(s) 48, 456, 1015, 2334
MmeI TCCRAC 3 cut(s) 264, 729, 2139
MroXI GAANNNNTTC 1 cut(s) 2664
MseI TTAA 7 cut(s) 909, 1907, 2462, 2517, 2676, 2702, 2731
MslI CAYNNNNRTG 2 cut(s) 572, 1047
MspA1I CMGCKG 6 cut(s) 60, 890, 902, 1545, 1643, 2606
MspI CCGG 3 cut(s) 17, 174, 408
MspR9I CCNGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
MunI CAATTG 2 cut(s) 475, 1308
Mva1269I GAATGC 2 cut(s) 669, 1170
MvaI CCWGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
MvnI CGCG 2 cut(s) 288, 484
MwoI GCNNNNNNNGC 8 cut(s) 374, 383, 490, 896, 1799, 1895, 2039, 2141
NdeI CATATG 3 cut(s) 302, 613, 2007
NlaIV GGNNCC 4 cut(s) 626, 1293, 2287, 2615
NmuCI GTSAC 3 cut(s) 649, 1388, 1709
NspI RCATGY 2 cut(s) 713, 1276
PagI TCATGA 1 cut(s) 567
PceI AGGCCT 1 cut(s) 338
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 2 cut(s) 669, 1170
PdmI GAANNNNTTC 1 cut(s) 2664
PflFI GACNNNGTC 2 cut(s) 263, 1386
PflMI CCANNNNNTGG 1 cut(s) 1695
PfoI TCCNGGA 1 cut(s) 1453
PmaCI CACGTG 1 cut(s) 857
PmlI CACGTG 1 cut(s) 857
Ppu21I YACGTR 2 cut(s) 857, 1364
PshAI GACNNNNGTC 1 cut(s) 806
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 7 cut(s) 21, 333, 1033, 1227, 1453, 1688, 2481
PspCI CACGTG 1 cut(s) 857
PspEI GGTNACC 1 cut(s) 649
PspGI CCWGG 7 cut(s) 21, 333, 1033, 1227, 1453, 1688, 2481
PspN4I GGNNCC 4 cut(s) 626, 1293, 2287, 2615
PspPI GGNCC 5 cut(s) 19, 331, 410, 1037, 2286
PstNI CAGNNNCTG 3 cut(s) 902, 1643, 2303
PsuI RGATCY 2 cut(s) 2161, 2486
PsyI GACNNNGTC 2 cut(s) 263, 1386
PvuII CAGCTG 4 cut(s) 890, 902, 1643, 2606
RsaI GTAC 5 cut(s) 357, 745, 943, 978, 1186
RsaNI GTAC 5 cut(s) 356, 744, 942, 977, 1185
RseI CAYNNNNRTG 2 cut(s) 572, 1047
SacI GAGCTC 1 cut(s) 48
SaqAI TTAA 7 cut(s) 909, 1907, 2462, 2517, 2676, 2702, 2731
Sau96I GGNCC 5 cut(s) 19, 331, 410, 1037, 2286
ScrFI CCNGG 7 cut(s) 23, 335, 1035, 1229, 1455, 1690, 2483
SduI GDGCHC 4 cut(s) 48, 456, 1015, 2334
SfaNI GCATC 4 cut(s) 1090, 1337, 1446, 2309
SfcI CTRYAG 4 cut(s) 340, 1500, 1615, 2095
SinI GGWCC 4 cut(s) 19, 331, 410, 2286
SmiMI CAYNNNNRTG 2 cut(s) 572, 1047
SmlI CTYRAG 1 cut(s) 1513
SmoI CTYRAG 1 cut(s) 1513
SnaBI TACGTA 1 cut(s) 1364
SseBI AGGCCT 1 cut(s) 338
SspI AATATT 3 cut(s) 535, 1608, 1993
SspMI CTAG 6 cut(s) 645, 1748, 1892, 1934, 2138, 2412
SstI GAGCTC 1 cut(s) 48
StuI AGGCCT 1 cut(s) 338
StyD4I CCNGG 7 cut(s) 21, 333, 1033, 1227, 1453, 1688, 2481
StyI CCWWGG 4 cut(s) 428, 1891, 2347, 2538
TaaI ACNGT 5 cut(s) 12, 105, 1504, 1529, 2085
TaiI ACGT 6 cut(s) 749, 859, 1366, 1387, 1405, 1716
TaqI TCGA 8 cut(s) 168, 186, 249, 675, 699, 800, 1302, 1379
TaqII GACCGA 1 cut(s) 276
TauI GCSGC 2 cut(s) 39, 288
Tru1I TTAA 7 cut(s) 909, 1907, 2462, 2517, 2676, 2702, 2731
Tru9I TTAA 7 cut(s) 909, 1907, 2462, 2517, 2676, 2702, 2731
TscAI CASTG 4 cut(s) 819, 1227, 1804, 2061
TseFI GTSAC 3 cut(s) 649, 1388, 1709
Tsp45I GTSAC 3 cut(s) 649, 1388, 1709
TspGWI ACGGA 4 cut(s) 38, 426, 929, 2164
TspRI CASTG 4 cut(s) 819, 1227, 1804, 2061
Tth111I GACNNNGTC 2 cut(s) 263, 1386
Van91I CCANNNNNTGG 1 cut(s) 1695
VpaK11BI GGWCC 4 cut(s) 19, 331, 410, 2286
XapI RAATTY 2 cut(s) 1572, 1861
XbaI TCTAGA 1 cut(s) 2137
XceI RCATGY 2 cut(s) 713, 1276
XmaJI CCTAGG 1 cut(s) 1891
XmiI GTMKAC 3 cut(s) 267, 1464, 2726
XmnI GAANNNNTTC 1 cut(s) 2664
XspI CTAG 6 cut(s) 645, 1748, 1892, 1934, 2138, 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.