RchiOBHm_Chr1g0321111

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000877
Physical Location & Seq
Reverse (-)
8577849 .. 8588250
10402 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55118

Sequence Viewer

Length: 2739 bp
ATGTCTGAACCGTCGCCGGACCTCGCTATCCTCCGCGGCTACGAGCTCCGTCTCCTCCGCTGCACCTTCCTCTCTCCTTCTCCGCCGTCCGATCATGAACAACCGTCCGATCAAACCTCGCCCACTCACCCCCTTTCCCCTCTAATCTCCTCCCTCCTCACTTCCATCGAGTCCGGCCGATACCTCGAAGCCCTCACCTCCGCCGACGCAAACCGGCTCGTCTTCAAACTCACCGATTCCGACTCGCTCGGCGACCACGACCCCGACCGAGTCTACTCCGAGTTGCTCCGCCGCGTGGAGTCGTTCATATGCGAAGAAGCTGAGGATAATGGGAAGGACCAGGCCTATAGAGTCGTCGTCGTACTCTGCATTGCCGTAGCTGCCTTACTTGCTTTCACTCAGTCTAACCTAACCGGACCTTTGGAGGGGCTGCCAAGGTGTCCGTTGCCACTGGAAGTGCCCTTATGTGATGAATGGGACGATTGGGCGCGGAATCAGCTTATGGCTGCTGGCTCTGACTTGCTTGGAAAGGTCTATAATATTCAGTATATAATTTATGCAAAGATATTGGTCATGAAGATGAAAGATTTGTTATTTGAAGGAAGTCTGTCTTGTGCATATGGAATTAGGAGCCTTTCATGGTGGCTCGCTAGGGTCACCTTTCTCCATCAGCACATTCTCGATGAGCGGTCTTCATCTCTGTTCGACCTTTTGCATGTCTTTACAAGTGAAACTTTGAATCATTTTGGCACGTTGGAGAAATTAACAAGTTATTGGGGTAACAATTTGCGTAATGGCGAGGGATCAACACTCGTCTCAGTGATTCATCTGGAAGCTGGAATGATGGAATACATCTATGCATGTGTTGATTCATGCAGGTTGCATTTTGAATCAGCTGAAGCAGCAGCTGGTGTTAAGCTTTCAGTTACAGGGGTTCTTGGCTTCCGTACTATACATCAGGTTGAACCAAAGGCACAAATGGTACTTTTAGCAAACACAACTTCATCAAAGAGTGGGGCTCTCTGTTCCTCTGAAAGCCCTGGCCCTCATAGATACGATTCTATTGGCAGAAATGATATATCTAAGCATCCATCTGAGTCCCATGAGGCTTCTGATATATTATTGACTCCAAGATTGGTAGAGAATGAGAGTGATTCTGGAGTTATATCAGACGGCATTCAAGTTGGTGGTGGTGGTGCTGACCCTTTGAGTGCAATCCAGCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGAGCACACGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGAGACGTAGTCACACAAAGGAACGTGCATTGACGATGATGGAAACATTGGTTCAGGGCATCAGCGATCCCTCTCCAGGAGTGGCAGACAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTAATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCATTGGGTGACGTTACTAATGATGATGCCTGCTTTGAAAAAGCCCTAGAAGTTTCAAACGATAGGTCGGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGGAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATAGGGATATTGAGAAGGCACTAGATGGCTTTACACGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCCTGTTTGCATATGATAAAAGGGAAGAGTAAAGAAGCTTTCATTGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGTTATCAATTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTGCACGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATTCTGAGTTATTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTAATTCAGCAATGACTGATGATGAAGATAACTTTCTCGTTTGTGGCACCACAAATGCAGCATCTGAGGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTCCTTGGAAAAGTTCTACAACAGATAGTTCGGAGTGGAAATGGAACAGATATTTGGGGCTTGTATGCTAGATGGCAAAAAATGAAAGGAGACCTCTCAATGTGCAGAGAAGCTTGGTTAAAGCAAGTCAGATCATACCAGGGGTCTGATTTGTGGAAAGATAGAGATCGGTTTAAAAAGTTTGCGAAATCCTCCTTGGAACTCTGCAAGGTGTATATGGAGATTTCTTCATCTACTGGCAGCCGTGATGAACTTCTCTCAGCTGAAAGGCACCTAAGGAACATAATGAAACAGGCAGGGAGTTTCGCAGACATGGAAGAACTTCAACATCTTAAAGCCTGCCTTGATGAAGTGAAGTTAAAACTTGATTGTGATAGTGTGTCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

912

Amino Acids

102.02

Weight (kDa)

5.34

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 867
AccB1I GGYRCC 2 cut(s) 2291, 2619
AccB7I CCANNNNNTGG 1 cut(s) 1701
AccBSI CCGCTC 1 cut(s) 688
AccI GTMKAC 2 cut(s) 273, 2732
AccII CGCG 3 cut(s) 36, 294, 490
AclWI GGATC 5 cut(s) 811, 1225, 1445, 1964, 2175
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 2 cut(s) 1578, 1867
AcuI CTGAAG 2 cut(s) 918, 2084
AdeI CACNNNGTG 1 cut(s) 1805
AfaI GTAC 3 cut(s) 363, 949, 984
AfiI CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
AjnI CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
AjuI GAANNNNNNNTTGG 4 cut(s) 2386, 2418, 2528, 2560
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
Alw21I GWGCWC 3 cut(s) 48, 1265, 2340
Alw26I GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
AlwI GGATC 5 cut(s) 811, 1225, 1445, 1964, 2175
AlwNI CAGNNNCTG 3 cut(s) 908, 1649, 2309
Ama87I CYCGRG 2 cut(s) 1779, 2325
AoxI GGCC 4 cut(s) 175, 342, 1042, 1860
ApoI RAATTY 2 cut(s) 1578, 1867
ArsI GACNNNNNNTTYG 2 cut(s) 1757, 1789
Asp700I GAANNNNTTC 2 cut(s) 2191, 2670
AspA2I CCTAGG 1 cut(s) 1897
AspLEI GCGC 1 cut(s) 490
AspS9I GGNCC 4 cut(s) 19, 337, 416, 1043
AsuHPI GGTGA 7 cut(s) 119, 187, 223, 649, 1547, 1727, 2232
AvaI CYCGRG 2 cut(s) 1779, 2325
AvaII GGWCC 3 cut(s) 19, 337, 416
AvrII CCTAGG 1 cut(s) 1897
AxyI CCTNAGG 1 cut(s) 2624
BaeGI GKGCMC 1 cut(s) 462
BanI GGYRCC 2 cut(s) 2291, 2619
BanII GRGCYC 2 cut(s) 48, 1021
BbsI GAAGAC 2 cut(s) 214, 684
Bbv12I GWGCWC 3 cut(s) 48, 1265, 2340
BbvCI CCTCAGC 1 cut(s) 321
BccI CCATC 9 cut(s) 173, 675, 838, 1099, 1281, 1417, 1877, 1937, 2415
BceAI ACGGC 5 cut(s) 70, 359, 1189, 1685, 2577
BciT130I CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BciVI GTATCC 1 cut(s) 1887
BclI TGATCA 1 cut(s) 1659
BcoDI GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
BfaI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
BfmI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
BfuAI ACCTGC 1 cut(s) 867
BfuI GTATCC 1 cut(s) 1887
BglI GCCNNNNNGGC 1 cut(s) 1901
BlnI CCTAGG 1 cut(s) 1897
BlpI GCTNAGC 2 cut(s) 1785, 2334
Bme1390I CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
Bme18I GGWCC 3 cut(s) 19, 337, 416
BmeT110I CYCGRG 2 cut(s) 1779, 2325
BmgT120I GGNCC 4 cut(s) 19, 337, 416, 1043
BmiI GGNNCC 4 cut(s) 632, 1299, 2293, 2621
BmrFI CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BmsI GCATC 5 cut(s) 1096, 1343, 1452, 1723, 2315
BpiI GAAGAC 2 cut(s) 214, 684
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
BpmI CTGGAG 2 cut(s) 1179, 1443
Bpu10I CCTNAGC 2 cut(s) 321, 2136
Bpu1102I GCTNAGC 2 cut(s) 1785, 2334
BsaAI YACGTR 1 cut(s) 1370
BsaBI GATNNNNATC 2 cut(s) 1499, 2514
BsaI GGTCTC 2 cut(s) 1797, 2433
BsaJI CCNNGG 8 cut(s) 34, 434, 1039, 1694, 1897, 2353, 2488, 2544
BsaWI WCCGGW 1 cut(s) 413
BsaXI ACNNNNNCTCC 2 cut(s) 1557, 1587
Bsc4I CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
Bse118I RCCGGY 1 cut(s) 213
Bse1I ACTGG 2 cut(s) 456, 2590
Bse21I CCTNAGG 1 cut(s) 2624
Bse3DI GCAATG 5 cut(s) 369, 1863, 2043, 2134, 2262
Bse8I GATNNNNATC 2 cut(s) 1499, 2514
BseBI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BseDI CCNNGG 8 cut(s) 34, 434, 1039, 1694, 1897, 2353, 2488, 2544
BseGI GGATG 1 cut(s) 1087
BseJI GATNNNNATC 2 cut(s) 1499, 2514
BseLI CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
BseMI GCAATG 5 cut(s) 369, 1863, 2043, 2134, 2262
BseNI ACTGG 2 cut(s) 456, 2590
BseRI GAGGAG 3 cut(s) 44, 139, 146
BseSI GKGCMC 1 cut(s) 462
BseX3I CGGCCG 1 cut(s) 175
BsgI GTGCAG 3 cut(s) 46, 2136, 2473
Bsh1236I CGCG 3 cut(s) 36, 294, 490
Bsh1285I CGRYCG 2 cut(s) 178, 268
BshFI GGCC 4 cut(s) 177, 344, 1044, 1862
BshNI GGYRCC 2 cut(s) 2291, 2619
BsiEI CGRYCG 2 cut(s) 178, 268
BsiHKAI GWGCWC 3 cut(s) 48, 1265, 2340
BsiHKCI CYCGRG 2 cut(s) 1779, 2325
BsiSI CCGG 4 cut(s) 17, 174, 214, 414
BslFI GGGAC 2 cut(s) 491, 1084
BslI CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
BsmAI GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
BsmBI CGTCTC 3 cut(s) 56, 820, 1381
BsmFI GGGAC 2 cut(s) 491, 1084
BsmI GAATGC 1 cut(s) 1176
BsnI GGCC 4 cut(s) 177, 344, 1044, 1862
Bso31I GGTCTC 2 cut(s) 1797, 2433
BsoBI CYCGRG 2 cut(s) 1779, 2325
Bsp1286I GDGCHC 5 cut(s) 48, 462, 1021, 1265, 2340
Bsp1720I GCTNAGC 2 cut(s) 1785, 2334
BspANI GGCC 4 cut(s) 177, 344, 1044, 1862
BspFNI CGCG 3 cut(s) 36, 294, 490
BspHI TCATGA 2 cut(s) 94, 573
BspLI GGNNCC 4 cut(s) 632, 1299, 2293, 2621
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 5 cut(s) 811, 1225, 1445, 1964, 2175
BspQI GCTCTTC 1 cut(s) 1253
BspT107I GGYRCC 2 cut(s) 2291, 2619
BspTNI GGTCTC 2 cut(s) 1797, 2433
BsrBI CCGCTC 1 cut(s) 688
BsrDI GCAATG 5 cut(s) 369, 1863, 2043, 2134, 2262
BsrFI RCCGGY 1 cut(s) 213
BsrI ACTGG 2 cut(s) 456, 2590
BssAI RCCGGY 1 cut(s) 213
BssECI CCNNGG 8 cut(s) 34, 434, 1039, 1694, 1897, 2353, 2488, 2544
BssT1I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Bst2UI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
Bst4CI ACNGT 5 cut(s) 12, 105, 1510, 1535, 2081
Bst6I CTCTTC 2 cut(s) 1253, 2021
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstBAI YACGTR 1 cut(s) 1370
BstC8I GCNNGC 6 cut(s) 511, 648, 1224, 1738, 1801, 2689
BstDSI CCRYGG 1 cut(s) 34
BstEII GGTNACC 1 cut(s) 655
BstF5I GGATG 1 cut(s) 1087
BstFNI CGCG 3 cut(s) 36, 294, 490
BstHHI GCGC 1 cut(s) 490
BstMAI GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
BstMCI CGRYCG 2 cut(s) 178, 268
BstMWI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
BstNI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BstNSI RCATGY 3 cut(s) 719, 864, 1282
BstPI GGTNACC 1 cut(s) 655
BstSCI CCNGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
BstSFI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
BstSLI GKGCMC 1 cut(s) 462
BstSNI TACGTA 1 cut(s) 1370
BstUI CGCG 3 cut(s) 36, 294, 490
BstV2I GAAGAC 2 cut(s) 214, 684
BstX2I RGATCY 1 cut(s) 2167
BstYI RGATCY 1 cut(s) 2167
BstZI CGGCCG 1 cut(s) 175
Bsu36I CCTNAGG 1 cut(s) 2624
BsuI GTATCC 1 cut(s) 1887
BsuRI GGCC 4 cut(s) 177, 344, 1044, 1862
BtgI CCRYGG 1 cut(s) 34
BtsCI GGATG 1 cut(s) 1087
BtsI GCAGTG 2 cut(s) 1233, 1810
BtsIMutI CAGTG 5 cut(s) 449, 825, 1233, 1810, 2060
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 6 cut(s) 511, 648, 1224, 1738, 1801, 2689
CaiI CAGNNNCTG 3 cut(s) 908, 1649, 2309
CciI TCATGA 2 cut(s) 94, 573
CfoI GCGC 1 cut(s) 490
Cfr10I RCCGGY 1 cut(s) 213
Cfr13I GGNCC 4 cut(s) 19, 337, 416, 1043
Cfr42I CCGCGG 1 cut(s) 37
CseI GACGC 1 cut(s) 215
Csp6I GTAC 3 cut(s) 362, 948, 983
CviQI GTAC 3 cut(s) 362, 948, 983
DraI TTTAAA 1 cut(s) 2524
DraIII CACNNNGTG 1 cut(s) 1805
EaeI YGGCCR 1 cut(s) 175
EagI CGGCCG 1 cut(s) 175
Eam1104I CTCTTC 2 cut(s) 1253, 2021
EarI CTCTTC 2 cut(s) 1253, 2021
EciI GGCGGA 3 cut(s) 72, 190, 278
Ecl136II GAGCTC 1 cut(s) 46
EclXI CGGCCG 1 cut(s) 175
Eco105I TACGTA 1 cut(s) 1370
Eco130I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Eco147I AGGCCT 1 cut(s) 344
Eco24I GRGCYC 2 cut(s) 48, 1021
Eco31I GGTCTC 2 cut(s) 1797, 2433
Eco47I GGWCC 3 cut(s) 19, 337, 416
Eco52I CGGCCG 1 cut(s) 175
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 2 cut(s) 918, 2084
Eco81I CCTNAGG 1 cut(s) 2624
Eco88I CYCGRG 2 cut(s) 1779, 2325
Eco91I GGTNACC 1 cut(s) 655
EcoICRI GAGCTC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 655
EcoRI GAATTC 1 cut(s) 1867
EcoRII CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
EcoT14I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
EcoT22I ATGCAT 1 cut(s) 862
EcoT38I GRGCYC 2 cut(s) 48, 1021
ErhI CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Esp3I CGTCTC 3 cut(s) 56, 820, 1381
FalI AAGNNNNNCTT 8 cut(s) 595, 627, 718, 750, 2221, 2253, 2676, 2708
FaqI GGGAC 2 cut(s) 491, 1084
FauNDI CATATG 3 cut(s) 308, 619, 2013
FbaI TGATCA 1 cut(s) 1659
FblI GTMKAC 2 cut(s) 273, 2732
FokI GGATG 1 cut(s) 1074
FriOI GRGCYC 2 cut(s) 48, 1021
FspBI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
GlaI GCGC 1 cut(s) 489
GsuI CTGGAG 2 cut(s) 1179, 1443
HaeIII GGCC 4 cut(s) 177, 344, 1044, 1862
HapII CCGG 4 cut(s) 17, 174, 214, 414
HgaI GACGC 1 cut(s) 215
HhaI GCGC 1 cut(s) 490
Hin6I GCGC 1 cut(s) 488
HinP1I GCGC 1 cut(s) 488
HindIII AAGCTT 3 cut(s) 917, 2037, 2460
HpaII CCGG 4 cut(s) 17, 174, 214, 414
HphI GGTGA 7 cut(s) 119, 187, 223, 649, 1547, 1727, 2232
Hpy166II GTNNAC 3 cut(s) 274, 1538, 2733
Hpy8I GTNNAC 3 cut(s) 274, 1538, 2733
Hpy99I CGWCG 5 cut(s) 16, 209, 359, 362, 1353
HpyAV CCTTC 8 cut(s) 76, 87, 328, 593, 1256, 1519, 1927, 2152
HpyCH4III ACNGT 5 cut(s) 12, 105, 1510, 1535, 2081
HpyCH4IV ACGT 5 cut(s) 752, 1369, 1390, 1408, 1719
HpyF10VI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
HpySE526I ACGT 5 cut(s) 752, 1369, 1390, 1408, 1719
HspAI GCGC 1 cut(s) 488
Ksp22I TGATCA 1 cut(s) 1659
KspI CCGCGG 1 cut(s) 37
LguI GCTCTTC 1 cut(s) 1253
LmnI GCTCC 4 cut(s) 51, 291, 630, 1303
LweI GCATC 5 cut(s) 1096, 1343, 1452, 1723, 2315
MaeI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
MaeII ACGT 5 cut(s) 752, 1369, 1390, 1408, 1719
MaeIII GTNAC 6 cut(s) 655, 779, 925, 1394, 1715, 1720
MbiI CCGCTC 1 cut(s) 688
MboII GAAGA 9 cut(s) 214, 326, 589, 684, 1270, 2038, 2282, 2568, 2678
MfeI CAATTG 2 cut(s) 1314, 2087
MflI RGATCY 1 cut(s) 2167
MhlI GDGCHC 5 cut(s) 48, 462, 1021, 1265, 2340
MlyI GAGTC 9 cut(s) 179, 236, 279, 308, 360, 1106, 1120, 1391, 1859
MmeI TCCRAC 3 cut(s) 264, 735, 2145
Mph1103I ATGCAT 1 cut(s) 862
MroXI GAANNNNTTC 2 cut(s) 2191, 2670
MseI TTAA 8 cut(s) 764, 915, 1913, 2468, 2523, 2682, 2708, 2737
MslI CAYNNNNRTG 1 cut(s) 578
MspA1I CMGCKG 7 cut(s) 36, 60, 896, 908, 1551, 1649, 2612
MspI CCGG 4 cut(s) 17, 174, 214, 414
MspR9I CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
MunI CAATTG 2 cut(s) 1314, 2087
Mva1269I GAATGC 1 cut(s) 1176
MvaI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
MvnI CGCG 3 cut(s) 36, 294, 490
MwoI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
NdeI CATATG 3 cut(s) 308, 619, 2013
NlaIV GGNNCC 4 cut(s) 632, 1299, 2293, 2621
NmeAIII GCCGAG 1 cut(s) 228
NmuCI GTSAC 3 cut(s) 655, 1394, 1715
NsiI ATGCAT 1 cut(s) 862
NspI RCATGY 3 cut(s) 719, 864, 1282
PagI TCATGA 2 cut(s) 94, 573
PceI AGGCCT 1 cut(s) 344
PciSI GCTCTTC 1 cut(s) 1253
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1176
PdmI GAANNNNTTC 2 cut(s) 2191, 2670
PflFI GACNNNGTC 2 cut(s) 269, 1392
PflMI CCANNNNNTGG 1 cut(s) 1701
PfoI TCCNGGA 1 cut(s) 1459
PleI GAGTC 9 cut(s) 178, 236, 278, 307, 359, 1105, 1120, 1390, 1858
PpsI GAGTC 9 cut(s) 178, 236, 278, 307, 359, 1105, 1120, 1390, 1858
Ppu21I YACGTR 1 cut(s) 1370
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
PspEI GGTNACC 1 cut(s) 655
PspGI CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
PspN4I GGNNCC 4 cut(s) 632, 1299, 2293, 2621
PspPI GGNCC 4 cut(s) 19, 337, 416, 1043
PstNI CAGNNNCTG 3 cut(s) 908, 1649, 2309
PsuI RGATCY 1 cut(s) 2167
PsyI GACNNNGTC 2 cut(s) 269, 1392
PvuII CAGCTG 4 cut(s) 896, 908, 1649, 2612
RsaI GTAC 3 cut(s) 363, 949, 984
RsaNI GTAC 3 cut(s) 362, 948, 983
RseI CAYNNNNRTG 1 cut(s) 578
SacI GAGCTC 1 cut(s) 48
SacII CCGCGG 1 cut(s) 37
SapI GCTCTTC 1 cut(s) 1253
SaqAI TTAA 8 cut(s) 764, 915, 1913, 2468, 2523, 2682, 2708, 2737
Sau96I GGNCC 4 cut(s) 19, 337, 416, 1043
SchI GAGTC 9 cut(s) 179, 236, 279, 308, 360, 1106, 1120, 1391, 1859
ScrFI CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
SduI GDGCHC 5 cut(s) 48, 462, 1021, 1265, 2340
SfaNI GCATC 5 cut(s) 1096, 1343, 1452, 1723, 2315
SfcI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
Sfr303I CCGCGG 1 cut(s) 37
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 3 cut(s) 19, 337, 416
SmiMI CAYNNNNRTG 1 cut(s) 578
SnaBI TACGTA 1 cut(s) 1370
SseBI AGGCCT 1 cut(s) 344
SspI AATATT 3 cut(s) 541, 1614, 1999
SspMI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
SstI GAGCTC 1 cut(s) 48
StuI AGGCCT 1 cut(s) 344
StyD4I CCNGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
StyI CCWWGG 4 cut(s) 434, 1897, 2353, 2544
TaaI ACNGT 5 cut(s) 12, 105, 1510, 1535, 2081
TaiI ACGT 5 cut(s) 755, 1372, 1393, 1411, 1722
TaqI TCGA 6 cut(s) 168, 186, 681, 705, 1308, 1385
TaqII GACCGA 1 cut(s) 282
TauI GCSGC 2 cut(s) 39, 294
Tru1I TTAA 8 cut(s) 764, 915, 1913, 2468, 2523, 2682, 2708, 2737
Tru9I TTAA 8 cut(s) 764, 915, 1913, 2468, 2523, 2682, 2708, 2737
TscAI CASTG 5 cut(s) 456, 825, 1233, 1810, 2067
TseFI GTSAC 3 cut(s) 655, 1394, 1715
Tsp45I GTSAC 3 cut(s) 655, 1394, 1715
TspGWI ACGGA 4 cut(s) 38, 432, 935, 2170
TspRI CASTG 5 cut(s) 456, 825, 1233, 1810, 2067
Tth111I GACNNNGTC 2 cut(s) 269, 1392
Van91I CCANNNNNTGG 1 cut(s) 1701
VpaK11BI GGWCC 3 cut(s) 19, 337, 416
XapI RAATTY 2 cut(s) 1578, 1867
XbaI TCTAGA 1 cut(s) 2143
XceI RCATGY 3 cut(s) 719, 864, 1282
XmaJI CCTAGG 1 cut(s) 1897
XmiI GTMKAC 2 cut(s) 273, 2732
XmnI GAANNNNTTC 2 cut(s) 2191, 2670
XspI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
Zsp2I ATGCAT 1 cut(s) 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.