Rw1G003650

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000877
Physical Location & Seq
Reverse (-)
6773140 .. 6786231
13092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G003650.1

Sequence Viewer

Length: 2235 bp
ATGGCTGCTGGCTCTGACTTGCTTGGAAAGGTCTATAATATTCAGTATATAATTTATGCAAAGATATTGGTCATGAAGATGAAAGATTTGTTATTTGAAGGAAGTTTGTCTTGTGCATATGGAATTAGGAGCCTTTCATGGTGGCTCACTAGGGTCACCCTTCTCCATCAGCGCATTCTCGATGAGCGGTCTTCATCTTTGTTTGACCTTTTGCATGTCTTCACAAGTGAAACTTTGAACCATTTTGGCACGTTGGAGAAAGTAACAAGTTATTGGGGTAACGATTTGCGTAATGGCGAGGGATCGACACTTGTCTCAGTGATTCATCTGGAAGCTGGAATGATGGAATACATCTATGCACGTGTTGATTCCTGCAGGTTGCATTTTGAATCAGCTGAAGCAGCGGCTGGTGTTAAGCTTTCAGTTACAGGGGTTCTTGGCTTCCGTACTATACATCAGGTCGAACCAAAGGCACAAATGGTACTTTTAGCAAACGCAACTTCGTCAGAGAGTGGGGCTCTCTGCTCCTCTGAAAGCCCTGGCCCTCATAGATACGATTCTATCGGCAGAAATGATATATCTAAGCATCCATCTGAGTCCCACGAGGCTTCTGATATATTATTGACTCCAAGATTGGTAGAGAATGAGAGCGATTCTGGAGTTATATCAGACAGCATTCAAGTTGGTGGTACTGCTGCTGACCCTTTGAGTGCAATCCATCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGAGCACGCGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGACACGTAGTCACACAAAGGAACGTGCATTGATGATGATGGAAACATCGGTTCAGGGTATCAAGGAGCCCTCTCCAGGAGTGGCAGACAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATATGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTGATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCATTAGGTGACGTTACTAATGATGATGCCTGCTTTGAAAAAGCCCTAGAAGTTTCAAACGATAGGTCGGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGCAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATAGGGATATTGAGAAGGCACTAGATGGCTTCACTCGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCTTGTTTGCATATGATAAAAGGGAAGAGTAAAGAAGCTTTTATTGCATTTAAAGAAGCATTGAAGTTCAAACGAAACAGCTACCAACTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTACATGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGCTGAGTTATTGGAAAGAATTATCACAGGGGTGGAAAGCATGGCTTCACCTACTAATTCAGCAATGACTGATGATGGTAACTTTCCCGTCAGTGGGACCACAAATGCAGAATCTGATGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTTCTTGGAAAAGTTCTACAACAGATAGTCCGAAGTGGAAATGGAGCAGATATTTGGGGCATGTATGCTAGATGGCAAAAAATGAAAGGAGACCTTGCGATGTGCAGAGAAGCTTGGTTAAAGCAAGTCAGATCATACCAGGGAGCTGATTTGTGGAAAGATAGAGATCGGTTTAAAAAGTTTGCAAAATCCTCCTTGGAACTCTGCAAGGTGTATATGGAGATTTCTTCGTCTACTGGCAGCCGTGATGAACTTCTCTCAGCTGAAAGGCACCTAAGGAACATAATTAAACAGGCGGGGAGTTTCTCAGACATGGAAGAACTTCAACATCTTAAAGCCTGCCTTGATGAAGTGAAGTTAAATCTTGATTCTGATAGTGCATCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

744

Amino Acids

83.29

Weight (kDa)

5.82

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 2115
AccB7I CCANNNNNTGG 1 cut(s) 1200
AccBSI CCGCTC 1 cut(s) 187
AccI GTMKAC 2 cut(s) 884, 2078
AccII CGCG 1 cut(s) 766
AciI CCGC 6 cut(s) 187, 404, 1021, 1048, 1288, 2141
AclWI GGATC 4 cut(s) 310, 724, 1463, 1674
AcsI RAATTY 2 cut(s) 1077, 1366
AcuI CTGAAG 1 cut(s) 417
AcvI CACGTG 1 cut(s) 362
AdeI CACNNNGTG 1 cut(s) 1304
AfaI GTAC 3 cut(s) 448, 483, 691
AfiI CCNNNNNNNGG 6 cut(s) 959, 1200, 1478, 1591, 1784, 1785
AflIII ACRYGT 2 cut(s) 361, 887
AhdI GACNNNNNGTC 1 cut(s) 891
AjnI CCWGG 5 cut(s) 538, 732, 958, 1193, 1983
AleI CACNNNNGTG 1 cut(s) 1721
AloI GAACNNNNNNTCC 2 cut(s) 1029, 1061
Alw21I GWGCWC 2 cut(s) 764, 1836
Alw26I GTCTC 3 cut(s) 319, 1296, 1929
AlwI GGATC 4 cut(s) 310, 724, 1463, 1674
AlwNI CAGNNNCTG 3 cut(s) 407, 1148, 1805
Ama87I CYCGRG 3 cut(s) 1278, 1452, 1821
AoxI GGCC 2 cut(s) 541, 1359
ApeKI GCWGC 8 cut(s) 5, 401, 695, 1142, 1145, 1403, 1406, 2085
ApoI RAATTY 2 cut(s) 1077, 1366
ArsI GACNNNNNNTTYG 2 cut(s) 1256, 1288
Asp700I GAANNNNTTC 1 cut(s) 2166
AspA2I CCTAGG 1 cut(s) 1396
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 2 cut(s) 542, 1788
AsuHPI GGTGA 4 cut(s) 148, 1046, 1226, 1731
AvaI CYCGRG 3 cut(s) 1278, 1452, 1821
AvaII GGWCC 1 cut(s) 1788
AvrII CCTAGG 1 cut(s) 1396
AxyI CCTNAGG 1 cut(s) 2120
BanI GGYRCC 1 cut(s) 2115
BanII GRGCYC 2 cut(s) 520, 954
BauI CACGAG 1 cut(s) 602
BbrPI CACGTG 1 cut(s) 362
BbsI GAAGAC 2 cut(s) 183, 211
Bbv12I GWGCWC 2 cut(s) 764, 1836
BbvI GCAGC 7 cut(s) 413, 682, 1154, 1157, 1390, 1393, 2097
BceAI ACGGC 2 cut(s) 1184, 2073
BciT130I CCWGG 5 cut(s) 540, 734, 960, 1195, 1985
BciVI GTATCC 1 cut(s) 1386
BclI TGATCA 1 cut(s) 1158
BcoDI GTCTC 3 cut(s) 319, 1296, 1929
BfaI CTAG 6 cut(s) 150, 1253, 1397, 1439, 1643, 1914
BfmI CTRYAG 4 cut(s) 373, 1005, 1120, 1600
BfuAI ACCTGC 1 cut(s) 366
BfuI GTATCC 1 cut(s) 1386
BglI GCCNNNNNGGC 1 cut(s) 1400
BisI GCNGC 9 cut(s) 6, 402, 405, 696, 1143, 1146, 1404, 1407, 2086
BlnI CCTAGG 1 cut(s) 1396
BlpI GCTNAGC 2 cut(s) 1284, 1830
BlsI GCNGC 9 cut(s) 7, 403, 406, 697, 1144, 1147, 1405, 1408, 2087
Bme1390I CCNGG 5 cut(s) 540, 734, 960, 1195, 1985
Bme18I GGWCC 1 cut(s) 1788
BmeRI GACNNNNNGTC 1 cut(s) 891
BmeT110I CYCGRG 3 cut(s) 1278, 1452, 1821
BmgT120I GGNCC 2 cut(s) 542, 1788
BmiI GGNNCC 5 cut(s) 131, 798, 951, 1789, 2117
BmrFI CCNGG 5 cut(s) 540, 734, 960, 1195, 1985
BmsI GCATC 4 cut(s) 595, 842, 1222, 1681
BoxI GACNNNNGTC 1 cut(s) 311
BpiI GAAGAC 2 cut(s) 183, 211
BplI GAGNNNNNCTC 2 cut(s) 502, 534
BpmI CTGGAG 2 cut(s) 678, 942
Bpu10I CCTNAGC 1 cut(s) 1635
Bpu1102I GCTNAGC 2 cut(s) 1284, 1830
BsaAI YACGTR 3 cut(s) 362, 869, 890
BsaBI GATNNNNATC 2 cut(s) 998, 2010
BsaI GGTCTC 2 cut(s) 1296, 1929
BsaJI CCNNGG 5 cut(s) 538, 1193, 1396, 1984, 2040
BsaXI ACNNNNNCTCC 2 cut(s) 1056, 1086
Bsc4I CCNNNNNNNGG 6 cut(s) 959, 1200, 1478, 1591, 1784, 1785
Bse1I ACTGG 1 cut(s) 2086
Bse21I CCTNAGG 1 cut(s) 2120
Bse3DI GCAATG 3 cut(s) 1362, 1633, 1761
Bse8I GATNNNNATC 2 cut(s) 998, 2010
BseBI CCWGG 5 cut(s) 540, 734, 960, 1195, 1985
BseDI CCNNGG 5 cut(s) 538, 1193, 1396, 1984, 2040
BseGI GGATG 1 cut(s) 586
BseJI GATNNNNATC 2 cut(s) 998, 2010
BseLI CCNNNNNNNGG 6 cut(s) 959, 1200, 1478, 1591, 1784, 1785
BseMI GCAATG 3 cut(s) 1362, 1633, 1761
BseMII CTCAG 8 cut(s) 330, 585, 836, 1649, 1686, 1821, 2118, 2166
BseNI ACTGG 1 cut(s) 2086
BseRI GAGGAG 1 cut(s) 517
BseXI GCAGC 7 cut(s) 413, 682, 1154, 1157, 1390, 1393, 2097
BsgI GTGCAG 1 cut(s) 1969
Bsh1236I CGCG 1 cut(s) 766
BshFI GGCC 2 cut(s) 543, 1361
BshNI GGYRCC 1 cut(s) 2115
BsiHKAI GWGCWC 2 cut(s) 764, 1836
BsiHKCI CYCGRG 3 cut(s) 1278, 1452, 1821
BslFI GGGAC 2 cut(s) 583, 1801
BslI CCNNNNNNNGG 6 cut(s) 959, 1200, 1478, 1591, 1784, 1785
BsmAI GTCTC 3 cut(s) 319, 1296, 1929
BsmFI GGGAC 2 cut(s) 583, 1801
BsmI GAATGC 2 cut(s) 174, 675
BsnI GGCC 2 cut(s) 543, 1361
Bso31I GGTCTC 2 cut(s) 1296, 1929
BsoBI CYCGRG 3 cut(s) 1278, 1452, 1821
Bsp1286I GDGCHC 4 cut(s) 520, 764, 954, 1836
Bsp143I GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
Bsp1720I GCTNAGC 2 cut(s) 1284, 1830
BspACI CCGC 6 cut(s) 187, 404, 1021, 1048, 1288, 2141
BspANI GGCC 2 cut(s) 543, 1361
BspCNI CTCAG 8 cut(s) 329, 586, 835, 1648, 1687, 1822, 2117, 2165
BspFNI CGCG 1 cut(s) 766
BspHI TCATGA 1 cut(s) 72
BspLI GGNNCC 5 cut(s) 131, 798, 951, 1789, 2117
BspMAI CTGCAG 1 cut(s) 377
BspMI ACCTGC 1 cut(s) 366
BspPI GGATC 4 cut(s) 310, 724, 1463, 1674
BspQI GCTCTTC 1 cut(s) 752
BspT107I GGYRCC 1 cut(s) 2115
BspTNI GGTCTC 2 cut(s) 1296, 1929
BsrBI CCGCTC 1 cut(s) 187
BsrDI GCAATG 3 cut(s) 1362, 1633, 1761
BsrI ACTGG 1 cut(s) 2086
BssECI CCNNGG 5 cut(s) 538, 1193, 1396, 1984, 2040
BssMI GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
BssSI CACGAG 1 cut(s) 602
BssT1I CCWWGG 2 cut(s) 1396, 2040
Bst2BI CACGAG 1 cut(s) 602
Bst2UI CCWGG 5 cut(s) 540, 734, 960, 1195, 1985
Bst4CI ACNGT 2 cut(s) 1009, 1590
Bst6I CTCTTC 2 cut(s) 752, 1520
BstAPI GCANNNNNTGC 1 cut(s) 1304
BstBAI YACGTR 3 cut(s) 362, 869, 890
BstC8I GCNNGC 5 cut(s) 10, 764, 1237, 1300, 2185
BstEII GGTNACC 1 cut(s) 154
BstF5I GGATG 1 cut(s) 586
BstFNI CGCG 1 cut(s) 766
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 7 cut(s) 305, 732, 1161, 1471, 1669, 1979, 2014
BstMAI GTCTC 3 cut(s) 319, 1296, 1929
BstMBI GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
BstMWI GCNNNNNNNGC 5 cut(s) 401, 1304, 1400, 1544, 1646
BstNI CCWGG 5 cut(s) 540, 734, 960, 1195, 1985
BstNSI RCATGY 3 cut(s) 218, 781, 1909
BstPAI GACNNNNGTC 1 cut(s) 311
BstPI GGTNACC 1 cut(s) 154
BstSCI CCNGG 5 cut(s) 538, 732, 958, 1193, 1983
BstSFI CTRYAG 4 cut(s) 373, 1005, 1120, 1600
BstSNI TACGTA 1 cut(s) 869
BstUI CGCG 1 cut(s) 766
BstV1I GCAGC 7 cut(s) 413, 682, 1154, 1157, 1390, 1393, 2097
BstV2I GAAGAC 2 cut(s) 183, 211
BstX2I RGATCY 1 cut(s) 1666
BstYI RGATCY 1 cut(s) 1666
Bsu36I CCTNAGG 1 cut(s) 2120
BsuI GTATCC 1 cut(s) 1386
BsuRI GGCC 2 cut(s) 543, 1361
BtgZI GCGATG 1 cut(s) 1958
BtsCI GGATG 1 cut(s) 586
BtsI GCAGTG 2 cut(s) 732, 1309
BtsIMutI CAGTG 4 cut(s) 324, 732, 1309, 1789
BveI ACCTGC 1 cut(s) 366
Cac8I GCNNGC 5 cut(s) 10, 764, 1237, 1300, 2185
CaiI CAGNNNCTG 3 cut(s) 407, 1148, 1805
CciI TCATGA 1 cut(s) 72
CfoI GCGC 1 cut(s) 174
Cfr13I GGNCC 2 cut(s) 542, 1788
Csp6I GTAC 3 cut(s) 447, 482, 690
CviQI GTAC 3 cut(s) 447, 482, 690
DpnI GATC 7 cut(s) 304, 731, 1160, 1470, 1668, 1978, 2013
DpnII GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
DraI TTTAAA 2 cut(s) 1552, 2020
DraIII CACNNNGTG 1 cut(s) 1304
DriI GACNNNNNGTC 1 cut(s) 891
Eam1104I CTCTTC 2 cut(s) 752, 1520
Eam1105I GACNNNNNGTC 1 cut(s) 891
EarI CTCTTC 2 cut(s) 752, 1520
Eco105I TACGTA 1 cut(s) 869
Eco130I CCWWGG 2 cut(s) 1396, 2040
Eco24I GRGCYC 2 cut(s) 520, 954
Eco31I GGTCTC 2 cut(s) 1296, 1929
Eco47I GGWCC 1 cut(s) 1788
Eco57I CTGAAG 1 cut(s) 417
Eco72I CACGTG 1 cut(s) 362
Eco81I CCTNAGG 1 cut(s) 2120
Eco88I CYCGRG 3 cut(s) 1278, 1452, 1821
Eco91I GGTNACC 1 cut(s) 154
EcoO65I GGTNACC 1 cut(s) 154
EcoRI GAATTC 1 cut(s) 1366
EcoRII CCWGG 5 cut(s) 538, 732, 958, 1193, 1983
EcoT14I CCWWGG 2 cut(s) 1396, 2040
EcoT38I GRGCYC 2 cut(s) 520, 954
ErhI CCWWGG 2 cut(s) 1396, 2040
FaqI GGGAC 2 cut(s) 583, 1801
FauI CCCGC 1 cut(s) 2134
FauNDI CATATG 2 cut(s) 118, 1512
FbaI TGATCA 1 cut(s) 1158
FblI GTMKAC 2 cut(s) 884, 2078
Fnu4HI GCNGC 9 cut(s) 6, 402, 405, 696, 1143, 1146, 1404, 1407, 2086
FokI GGATG 1 cut(s) 573
FriOI GRGCYC 2 cut(s) 520, 954
Fsp4HI GCNGC 9 cut(s) 6, 402, 405, 696, 1143, 1146, 1404, 1407, 2086
FspBI CTAG 6 cut(s) 150, 1253, 1397, 1439, 1643, 1914
GlaI GCGC 1 cut(s) 173
GluI GCNGC 9 cut(s) 6, 402, 405, 696, 1143, 1146, 1404, 1407, 2086
GsuI CTGGAG 2 cut(s) 678, 942
HaeIII GGCC 2 cut(s) 543, 1361
HhaI GCGC 1 cut(s) 174
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HindIII AAGCTT 3 cut(s) 416, 1536, 1956
HphI GGTGA 4 cut(s) 148, 1046, 1226, 1731
Hpy166II GTNNAC 3 cut(s) 885, 1037, 2079
Hpy8I GTNNAC 3 cut(s) 885, 1037, 2079
Hpy99I CGWCG 1 cut(s) 852
HpyAV CCTTC 6 cut(s) 92, 170, 755, 1018, 1426, 1651
HpyCH4III ACNGT 2 cut(s) 1009, 1590
HpyCH4IV ACGT 6 cut(s) 251, 361, 868, 889, 907, 1218
HpyF10VI GCNNNNNNNGC 5 cut(s) 401, 1304, 1400, 1544, 1646
HpySE526I ACGT 6 cut(s) 251, 361, 868, 889, 907, 1218
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 1158
Kzo9I GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
LguI GCTCTTC 1 cut(s) 752
LmnI GCTCC 6 cut(s) 129, 530, 802, 949, 1889, 1988
Lsp1109I GCAGC 7 cut(s) 413, 682, 1154, 1157, 1390, 1393, 2097
LweI GCATC 4 cut(s) 595, 842, 1222, 1681
MaeI CTAG 6 cut(s) 150, 1253, 1397, 1439, 1643, 1914
MaeII ACGT 6 cut(s) 251, 361, 868, 889, 907, 1218
MaeIII GTNAC 8 cut(s) 154, 262, 278, 424, 893, 1214, 1219, 1769
MalI GATC 7 cut(s) 304, 731, 1160, 1470, 1668, 1978, 2013
MbiI CCGCTC 1 cut(s) 187
MboI GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
MboII GAAGA 7 cut(s) 88, 183, 211, 769, 1537, 2064, 2174
MfeI CAATTG 1 cut(s) 813
MflI RGATCY 1 cut(s) 1666
MhlI GDGCHC 4 cut(s) 520, 764, 954, 1836
MlyI GAGTC 3 cut(s) 605, 619, 890
MmeI TCCRAC 2 cut(s) 234, 1644
MroXI GAANNNNTTC 1 cut(s) 2166
MseI TTAA 9 cut(s) 414, 1412, 1551, 1964, 2019, 2133, 2178, 2204, 2233
MslI CAYNNNNRTG 2 cut(s) 77, 1721
MspA1I CMGCKG 5 cut(s) 395, 404, 1050, 1148, 2108
MspR9I CCNGG 5 cut(s) 540, 734, 960, 1195, 1985
MunI CAATTG 1 cut(s) 813
Mva1269I GAATGC 2 cut(s) 174, 675
MvaI CCWGG 5 cut(s) 540, 734, 960, 1195, 1985
MvnI CGCG 1 cut(s) 766
MwoI GCNNNNNNNGC 5 cut(s) 401, 1304, 1400, 1544, 1646
NdeI CATATG 2 cut(s) 118, 1512
NdeII GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
NlaIV GGNNCC 5 cut(s) 131, 798, 951, 1789, 2117
NmuCI GTSAC 3 cut(s) 154, 893, 1214
NspI RCATGY 3 cut(s) 218, 781, 1909
OliI CACNNNNGTG 1 cut(s) 1721
PagI TCATGA 1 cut(s) 72
PciSI GCTCTTC 1 cut(s) 752
PctI GAATGC 2 cut(s) 174, 675
PdmI GAANNNNTTC 1 cut(s) 2166
PfeI GAWTC 9 cut(s) 322, 368, 389, 557, 653, 818, 976, 1802, 2213
PflMI CCANNNNNTGG 1 cut(s) 1200
PfoI TCCNGGA 1 cut(s) 958
PkrI GCNGC 9 cut(s) 7, 403, 406, 697, 1144, 1147, 1405, 1408, 2087
PleI GAGTC 3 cut(s) 604, 619, 889
PmaCI CACGTG 1 cut(s) 362
PmlI CACGTG 1 cut(s) 362
PpsI GAGTC 3 cut(s) 604, 619, 889
Ppu21I YACGTR 3 cut(s) 362, 869, 890
PshAI GACNNNNGTC 1 cut(s) 311
Psp6I CCWGG 5 cut(s) 538, 732, 958, 1193, 1983
PspCI CACGTG 1 cut(s) 362
PspEI GGTNACC 1 cut(s) 154
PspGI CCWGG 5 cut(s) 538, 732, 958, 1193, 1983
PspN4I GGNNCC 5 cut(s) 131, 798, 951, 1789, 2117
PspPI GGNCC 2 cut(s) 542, 1788
PstI CTGCAG 1 cut(s) 377
PstNI CAGNNNCTG 3 cut(s) 407, 1148, 1805
PsuI RGATCY 1 cut(s) 1666
PvuII CAGCTG 3 cut(s) 395, 1148, 2108
RsaI GTAC 3 cut(s) 448, 483, 691
RsaNI GTAC 3 cut(s) 447, 482, 690
RseI CAYNNNNRTG 2 cut(s) 77, 1721
SalI GTCGAC 1 cut(s) 883
SapI GCTCTTC 1 cut(s) 752
SaqAI TTAA 9 cut(s) 414, 1412, 1551, 1964, 2019, 2133, 2178, 2204, 2233
SatI GCNGC 9 cut(s) 6, 402, 405, 696, 1143, 1146, 1404, 1407, 2086
Sau3AI GATC 7 cut(s) 302, 729, 1158, 1468, 1666, 1976, 2011
Sau96I GGNCC 2 cut(s) 542, 1788
SbfI CCTGCAGG 1 cut(s) 377
SchI GAGTC 3 cut(s) 605, 619, 890
ScrFI CCNGG 5 cut(s) 540, 734, 960, 1195, 1985
SdaI CCTGCAGG 1 cut(s) 377
SduI GDGCHC 4 cut(s) 520, 764, 954, 1836
SfaNI GCATC 4 cut(s) 595, 842, 1222, 1681
SfcI CTRYAG 4 cut(s) 373, 1005, 1120, 1600
SinI GGWCC 1 cut(s) 1788
SmiMI CAYNNNNRTG 2 cut(s) 77, 1721
SnaBI TACGTA 1 cut(s) 869
Sse8387I CCTGCAGG 1 cut(s) 377
SsiI CCGC 6 cut(s) 187, 404, 1021, 1048, 1288, 2141
SspI AATATT 2 cut(s) 40, 1498
SspMI CTAG 6 cut(s) 150, 1253, 1397, 1439, 1643, 1914
StyD4I CCNGG 5 cut(s) 538, 732, 958, 1193, 1983
StyI CCWWGG 2 cut(s) 1396, 2040
TaaI ACNGT 2 cut(s) 1009, 1590
TaiI ACGT 6 cut(s) 254, 364, 871, 892, 910, 1221
TaqI TCGA 5 cut(s) 180, 305, 462, 807, 884
TauI GCSGC 1 cut(s) 407
TfiI GAWTC 9 cut(s) 322, 368, 389, 557, 653, 818, 976, 1802, 2213
Tru1I TTAA 9 cut(s) 414, 1412, 1551, 1964, 2019, 2133, 2178, 2204, 2233
Tru9I TTAA 9 cut(s) 414, 1412, 1551, 1964, 2019, 2133, 2178, 2204, 2233
TscAI CASTG 4 cut(s) 324, 732, 1309, 1789
TseFI GTSAC 3 cut(s) 154, 893, 1214
TseI GCWGC 8 cut(s) 5, 401, 695, 1142, 1145, 1403, 1406, 2085
Tsp45I GTSAC 3 cut(s) 154, 893, 1214
TspDTI ATGAA 9 cut(s) 89, 95, 126, 183, 314, 1197, 1943, 2109, 2208
TspGWI ACGGA 1 cut(s) 434
TspRI CASTG 4 cut(s) 324, 732, 1309, 1789
Van91I CCANNNNNTGG 1 cut(s) 1200
VpaK11BI GGWCC 1 cut(s) 1788
XapI RAATTY 2 cut(s) 1077, 1366
XbaI TCTAGA 1 cut(s) 1642
XceI RCATGY 3 cut(s) 218, 781, 1909
XmaJI CCTAGG 1 cut(s) 1396
XmiI GTMKAC 2 cut(s) 884, 2078
XmnI GAANNNNTTC 1 cut(s) 2166
XspI CTAG 6 cut(s) 150, 1253, 1397, 1439, 1643, 1914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.