pycom10g02020

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000877
Physical Location & Seq
Forward (+)
2118021 .. 2128898
10878 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g02020.18

Sequence Viewer

Length: 2595 bp
ATGTCCGAAACGTTGCCGGAACTCGCCATCCTCCGCTTGTACGAGCTCCGTCTCCTCCGCTGCACCCTCCCATCTCCGCCGTCCGATTTCTCACACCGTTCTCAACGGTGCGATGAAACACTTCCCGCTCACCCCCTCCACCCTCTAATCAACGACCTCCTAACTTCCATCGAGTCCGGGCAATACCTCCAAGCCCTCACCTCCCCCGACCTAGAACGCGTCGTTTTCAAATTCGCCGAGTCTGACTCGATACAATCGCTCGGAGACTCAGCGGAGTCCGCCGACCGAGTGTACTCCGAGTTGCTCGACCGAGTGGAATCGTTTGTATCCAAGGAATGTGAAGAGGAAGAAAACGATGGCGGCAAGGACAAGGCCTATAGAGTCATAGTCGTTCTGTGCATTGCTGTGGCTGCCCTTTTCGCTTTCACTCAATGCAACGTCACTGGACCGTTGGAGGGGTTGCCGAAGTGTCCTCTGCCGCTGGCGGTGCCCAAATGCGATGAGTGGGACAATTGGGCGCGCAATCAGCTTATGGCTGCTGGGTCTGACTTGCTTGGAAAGTTAATCAATATTCAGTATATAGTGTATGCGAAGATGTTGGCCATGAAGGTGAAAGATTTGCTATTTGAAGCGAGTGTGCCTTCTACGTATGGAATTAGGAGCATTTCATGGTGGCTCATTAGGACCACCCTTCTCCATCAAAGAATTCTTGATGACCGCTCTTCTTCTCTGTTCAATCTTTTGCAAGTCTTTACAAGTGAAACTTTGAATCATTTTGGTACACCGGAGAAAGTAACAAGCTACTGGGGTAACAATTTACAAAACGGCGAGGGATCGTCACTTGTCTCATCGATTCATCTGGAAGCTGGAATGATGGAATACACCTATGCACGAGTTGATTCATGCAGGGTACATTTTGAATCAGCTGAAGCAGCAGCTGGTCTTCAGCTTTCTCTTACAGGTGTTCTTGGCTTCCGTACTGTACATCAGGTAGAACCAAAGGCACAAATGATACTTTTAGCAAACCCAACTTCATCGAGCAGTGGCGGTAGCTGCCCCTCAGAAAGCCCTGGCTCCGAGACATGTGATTCTAGTATTGGCAGAAAGAATATACATCCATCTGAAAACCATGAGGCATCTGACATATTGATGACCCCAAAATTGTTAGCGAATGATGACAATTCTGGAACTAAACCAGAAGGCATTCAAGTTGATGGTACCGCTGCCACTGCTTTGAGTGCAATCCATCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAAAAGAGCACACGGCATGATGACATGCAAAGATGGGAAATGGCTCCTTACATAGAAGCAATTGATTCTCAGCAGTCATCATACTTTATTATACGGTGCTTCTGTCACATCCTACGGATTCGGTGGGAGTCGGCACGTAGTCGCACAAAGGAACGTGCTTTACTGATGATGGAAAAATTGGTTCAGGGTATCTCTGACCCTTCTCCAGGAGTGGCGGAAAGGATTCTTTTCTGCTATGACGTTTATATCCCCACAATTCCTGCCTTGCGGAAGGAATATGGTGAACTTTTAGTCAGCTGTGGTCTGATAGGGGAGGCGGTTAAAACTTTTGAGGATCTAGAGTTATGGGATAATCTTATATTCTGCTACCGCCTATTGGAGAAGAAAGCAGCAGCTGTTGAACTAATCAGGAAACGACTTTCTGAAACACCCAATGACCCCAGGTTATGGTGCTCATTGGGTGATGTTACTAATGATGATGCCTGCTTTGAAAAAGCCTTGGAAGTTTCAAATGATAGATCGGCTCGAGCAAAGCGGTCTCTTGCTCGTAGTGCATACAATAGAGGGGATTATGAAATCTCAAAGACCTTATGGGAGTCTGCAATGTCCTTGAATTCTTTGTATCCTGATGGCTGGTTTGCACTTGGGTCTGCTGCATTAAAGGCTAGGGATACTGAAAAGGCATTGGATGCCTTTACTCGGGCTGTTCAACTTGATCCTGAAAACGGGGAGGCATGGAATAATATTGCTTGCTTGCATATGATAAAAAAGAGGAATAAAGAATCCTTTGTTGCCTTTAGAGAAGCCCTGAAGTTCAAGCGAAACAGCTGGCAACTTTGGGAGAACTACAGTCATGTTGCCTTAGACGTTGGCAATATTGGTCAGGCTCTAGAGGCTGTGCAGATGGTCTTGGATATGACTAATAATAAAAGAGTTGATGCTGAATTTATGGAAAGAGTTGTGGCTGAGGTGGAAAGAATGTCTTCAAATACGACTCCAGCAATGATGGATGAAAATATCTCTCCCAATCAAGAATGTTCTGTAAATTCTCAAATAAATATTTGGAATGGTTTATCAAATGCAGAATCTGAGGTTGCAAAATCTCGGGAAATTAAACACTTAGTAGATTTCCTCGGAAAAGTTTTACAGAAGGTAGTTAAAAGTGGAAATGGAGCAGATATTTGGGGATTGTATGCACGGTGGCACAAAATGAAAGGAGACCTGACAATGTGCTCGGAAGCTTTATTAAAGCAAGTTAGATCATACCAGGGATCTGATTTGTGGAAAGATTGCTTTCTTGAAAGATCGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

865

Amino Acids

96.77

Weight (kDa)

5.37

Isoelectric Point (pI)

50.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1217
AccB1I GGYRCC 2 cut(s) 487, 1217
AccB7I CCANNNNNTGG 1 cut(s) 1728
AccBSI CCGCTC 2 cut(s) 128, 720
AccII CGCG 2 cut(s) 219, 520
AclI AACGTT 1 cut(s) 11
AclWI GGATC 5 cut(s) 841, 1252, 1623, 1991, 2560
AcoI YGGCCR 1 cut(s) 600
AcsI RAATTY 5 cut(s) 230, 705, 1894, 2225, 2326
AcuI CTGAAG 3 cut(s) 929, 948, 2111
AfaI GTAC 7 cut(s) 41, 293, 781, 912, 979, 984, 1219
AfiI CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
AflIII ACRYGT 2 cut(s) 217, 1082
AjnI CCWGG 5 cut(s) 1069, 1260, 1486, 1721, 2547
AloI GAACNNNNNNTCC 2 cut(s) 12, 44
Alw21I GWGCWC 4 cut(s) 48, 1292, 1736, 2516
Alw26I GTCTC 6 cut(s) 56, 258, 850, 1073, 1824, 2493
AlwI GGATC 5 cut(s) 841, 1252, 1623, 1991, 2560
AlwNI CAGNNNCTG 3 cut(s) 938, 1676, 2369
Ama87I CYCGRG 3 cut(s) 1806, 1980, 2385
AoxI GGCC 2 cut(s) 372, 600
ApoI RAATTY 5 cut(s) 230, 705, 1894, 2225, 2326
Asp700I GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
Asp718I GGTACC 1 cut(s) 1217
AspLEI GCGC 2 cut(s) 520, 522
AspS9I GGNCC 2 cut(s) 446, 684
AsuC2I CCSGG 1 cut(s) 178
AsuHPI GGTGA 5 cut(s) 122, 190, 622, 1574, 1754
AvaI CYCGRG 3 cut(s) 1806, 1980, 2385
AvaII GGWCC 2 cut(s) 446, 684
BaeGI GKGCMC 1 cut(s) 492
BalI TGGCCA 1 cut(s) 602
BanI GGYRCC 2 cut(s) 487, 1217
BanII GRGCYC 1 cut(s) 48
BauI CACGAG 1 cut(s) 891
BbsI GAAGAC 2 cut(s) 935, 2256
Bbv12I GWGCWC 4 cut(s) 48, 1292, 1736, 2516
BbvCI CCTCAGC 1 cut(s) 2247
BceAI ACGGC 3 cut(s) 64, 841, 1310
BciT130I CCWGG 5 cut(s) 1071, 1262, 1488, 1723, 2549
BciVI GTATCC 3 cut(s) 337, 1914, 1945
BcnI CCSGG 1 cut(s) 178
BcoDI GTCTC 6 cut(s) 56, 258, 850, 1073, 1824, 2493
BfaI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
BfmI CTRYAG 2 cut(s) 376, 2128
BfuI GTATCC 3 cut(s) 337, 1914, 1945
Bme1390I CCNGG 6 cut(s) 178, 1071, 1262, 1488, 1723, 2549
Bme18I GGWCC 2 cut(s) 446, 684
BmeT110I CYCGRG 3 cut(s) 1806, 1980, 2385
BmgT120I GGNCC 2 cut(s) 446, 684
BmiI GGNNCC 4 cut(s) 489, 1075, 1219, 1326
BmrFI CCNGG 6 cut(s) 178, 1071, 1262, 1488, 1723, 2549
BmrI ACTGGG 1 cut(s) 814
BmsI GCATC 4 cut(s) 1145, 1750, 1960, 2209
BmuI ACTGGG 1 cut(s) 814
BpiI GAAGAC 2 cut(s) 935, 2256
BplI GAGNNNNNCTC 2 cut(s) 230, 262
BpmI CTGGAG 2 cut(s) 1470, 2262
Bpu10I CCTNAGC 1 cut(s) 2247
BpuMI CCSGG 1 cut(s) 178
Bsa29I ATCGAT 2 cut(s) 851, 2588
BsaAI YACGTR 2 cut(s) 648, 1418
BsaI GGTCTC 2 cut(s) 1824, 2493
BsaJI CCNNGG 6 cut(s) 330, 1069, 1721, 1779, 2413, 2548
BsaWI WCCGGW 1 cut(s) 784
Bsc4I CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
Bse1I ACTGG 2 cut(s) 448, 809
Bse3DI GCAATG 3 cut(s) 399, 1890, 2289
BseBI CCWGG 5 cut(s) 1071, 1262, 1488, 1723, 2549
BseCI ATCGAT 2 cut(s) 851, 2588
BseDI CCNNGG 6 cut(s) 330, 1069, 1721, 1779, 2413, 2548
BseGI GGATG 5 cut(s) 27, 1114, 1389, 1975, 2296
BseLI CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
BseMI GCAATG 3 cut(s) 399, 1890, 2289
BseMII CTCAG 5 cut(s) 282, 1074, 1364, 2238, 2361
BseNI ACTGG 2 cut(s) 448, 809
BsePI GCGCGC 1 cut(s) 518
BseRI GAGGAG 1 cut(s) 44
BseSI GKGCMC 1 cut(s) 492
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 2 cut(s) 46, 2201
Bsh1236I CGCG 2 cut(s) 219, 520
Bsh1285I CGRYCG 2 cut(s) 286, 310
BshFI GGCC 2 cut(s) 374, 602
BshNI GGYRCC 2 cut(s) 487, 1217
BshVI ATCGAT 2 cut(s) 851, 2588
BsiEI CGRYCG 2 cut(s) 286, 310
BsiHKAI GWGCWC 4 cut(s) 48, 1292, 1736, 2516
BsiHKCI CYCGRG 3 cut(s) 1806, 1980, 2385
BsiSI CCGG 3 cut(s) 17, 177, 785
BslFI GGGAC 1 cut(s) 521
BslI CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
BsmAI GTCTC 6 cut(s) 56, 258, 850, 1073, 1824, 2493
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 1 cut(s) 521
BsmI GAATGC 1 cut(s) 1203
BsnI GGCC 2 cut(s) 374, 602
Bso31I GGTCTC 2 cut(s) 1824, 2493
BsoBI CYCGRG 3 cut(s) 1806, 1980, 2385
Bsp1286I GDGCHC 5 cut(s) 48, 492, 1292, 1736, 2516
Bsp1407I TGTACA 1 cut(s) 982
Bsp143I GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
BspANI GGCC 2 cut(s) 374, 602
BspCNI CTCAG 5 cut(s) 281, 1073, 1363, 2239, 2362
BspDI ATCGAT 2 cut(s) 851, 2588
BspFNI CGCG 2 cut(s) 219, 520
BspLI GGNNCC 4 cut(s) 489, 1075, 1219, 1326
BspPI GGATC 5 cut(s) 841, 1252, 1623, 1991, 2560
BspQI GCTCTTC 1 cut(s) 727
BspT107I GGYRCC 2 cut(s) 487, 1217
BspTNI GGTCTC 2 cut(s) 1824, 2493
BsrBI CCGCTC 2 cut(s) 128, 720
BsrDI GCAATG 3 cut(s) 399, 1890, 2289
BsrGI TGTACA 1 cut(s) 982
BsrI ACTGG 2 cut(s) 448, 809
BssECI CCNNGG 6 cut(s) 330, 1069, 1721, 1779, 2413, 2548
BssHII GCGCGC 1 cut(s) 518
BssMI GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 2 cut(s) 330, 1779
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 5 cut(s) 1071, 1262, 1488, 1723, 2549
Bst4CI ACNGT 7 cut(s) 98, 108, 450, 982, 1377, 2132, 2481
Bst6I CTCTTC 2 cut(s) 336, 727
BstAPI GCANNNNNTGC 1 cut(s) 1970
BstAUI TGTACA 1 cut(s) 982
BstBAI YACGTR 2 cut(s) 648, 1418
BstC8I GCNNGC 6 cut(s) 483, 520, 1765, 2032, 2036, 2111
BstDEI CTNAG 7 cut(s) 268, 1060, 1350, 2143, 2247, 2370, 2401
BstENI CCTNNNNNAGG 1 cut(s) 1485
BstF5I GGATG 5 cut(s) 27, 1114, 1389, 1975, 2296
BstFNI CGCG 2 cut(s) 219, 520
BstHHI GCGC 2 cut(s) 520, 522
BstKTI GATC 8 cut(s) 836, 1260, 1618, 1802, 1999, 2543, 2555, 2588
BstMAI GTCTC 6 cut(s) 56, 258, 850, 1073, 1824, 2493
BstMBI GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
BstMCI CGRYCG 2 cut(s) 286, 310
BstNI CCWGG 5 cut(s) 1071, 1262, 1488, 1723, 2549
BstNSI RCATGY 2 cut(s) 1086, 1309
BstSCI CCNGG 6 cut(s) 176, 1069, 1260, 1486, 1721, 2547
BstSFI CTRYAG 2 cut(s) 376, 2128
BstSLI GKGCMC 1 cut(s) 492
BstSNI TACGTA 1 cut(s) 648
BstUI CGCG 2 cut(s) 219, 520
BstV2I GAAGAC 2 cut(s) 935, 2256
BstX2I RGATCY 2 cut(s) 1615, 2552
BstYI RGATCY 2 cut(s) 1615, 2552
Bsu15I ATCGAT 2 cut(s) 851, 2588
BsuI GTATCC 3 cut(s) 337, 1914, 1945
BsuRI GGCC 2 cut(s) 374, 602
BsuTUI ATCGAT 2 cut(s) 851, 2588
BtgZI GCGATG 2 cut(s) 126, 513
BtsCI GGATG 5 cut(s) 27, 1114, 1389, 1975, 2296
BtsI GCAGTG 3 cut(s) 1048, 1227, 1260
BtsIMutI CAGTG 4 cut(s) 441, 1048, 1227, 1260
Cac8I GCNNGC 6 cut(s) 483, 520, 1765, 2032, 2036, 2111
CaiI CAGNNNCTG 3 cut(s) 938, 1676, 2369
CfoI GCGC 2 cut(s) 520, 522
Cfr13I GGNCC 2 cut(s) 446, 684
ClaI ATCGAT 2 cut(s) 851, 2588
CseI GACGC 1 cut(s) 208
Csp6I GTAC 7 cut(s) 40, 292, 780, 911, 978, 983, 1218
CviAII CATG 9 cut(s) 604, 669, 903, 1083, 1130, 1298, 1306, 2016, 2135
CviQI GTAC 7 cut(s) 40, 292, 780, 911, 978, 983, 1218
DdeI CTNAG 7 cut(s) 268, 1060, 1350, 2143, 2247, 2370, 2401
DpnI GATC 8 cut(s) 835, 1259, 1617, 1801, 1998, 2542, 2554, 2587
DpnII GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
EaeI YGGCCR 1 cut(s) 600
Eam1104I CTCTTC 2 cut(s) 336, 727
EarI CTCTTC 2 cut(s) 336, 727
EciI GGCGGA 3 cut(s) 66, 268, 1511
Ecl136II GAGCTC 1 cut(s) 46
Eco105I TACGTA 1 cut(s) 648
Eco130I CCWWGG 2 cut(s) 330, 1779
Eco147I AGGCCT 1 cut(s) 374
Eco24I GRGCYC 1 cut(s) 48
Eco31I GGTCTC 2 cut(s) 1824, 2493
Eco47I GGWCC 2 cut(s) 446, 684
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 3 cut(s) 929, 948, 2111
Eco88I CYCGRG 3 cut(s) 1806, 1980, 2385
EcoICRI GAGCTC 1 cut(s) 46
EcoNI CCTNNNNNAGG 1 cut(s) 1485
EcoRI GAATTC 2 cut(s) 705, 1894
EcoRII CCWGG 5 cut(s) 1069, 1260, 1486, 1721, 2547
EcoT14I CCWWGG 2 cut(s) 330, 1779
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 2 cut(s) 330, 1779
Esp3I CGTCTC 1 cut(s) 56
FaeI CATG 9 cut(s) 607, 672, 906, 1086, 1133, 1301, 1309, 2019, 2138
FalI AAGNNNNNCTT 4 cut(s) 748, 780, 2248, 2280
FaqI GGGAC 1 cut(s) 521
FatI CATG 9 cut(s) 603, 668, 902, 1082, 1129, 1297, 1305, 2015, 2134
FauI CCCGC 1 cut(s) 133
FauNDI CATATG 1 cut(s) 2040
FokI GGATG 5 cut(s) 14, 1101, 1376, 1982, 2303
FriOI GRGCYC 1 cut(s) 48
FspBI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
GlaI GCGC 2 cut(s) 519, 521
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 2 cut(s) 1470, 2262
HaeIII GGCC 2 cut(s) 374, 602
HapII CCGG 3 cut(s) 17, 177, 785
HgaI GACGC 1 cut(s) 208
HhaI GCGC 2 cut(s) 520, 522
Hin1II CATG 9 cut(s) 607, 672, 906, 1086, 1133, 1301, 1309, 2019, 2138
Hin6I GCGC 2 cut(s) 518, 520
HinP1I GCGC 2 cut(s) 518, 520
HindIII AAGCTT 1 cut(s) 2520
HpaII CCGG 3 cut(s) 17, 177, 785
HphI GGTGA 5 cut(s) 122, 190, 622, 1574, 1754
Hpy166II GTNNAC 3 cut(s) 292, 782, 1565
Hpy8I GTNNAC 3 cut(s) 292, 782, 1565
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 8 cut(s) 601, 651, 701, 1193, 1283, 1491, 1546, 2425
HpyCH4III ACNGT 7 cut(s) 98, 108, 450, 982, 1377, 2132, 2481
HpyCH4IV ACGT 7 cut(s) 11, 438, 647, 1417, 1435, 1521, 2148
HpyF3I CTNAG 7 cut(s) 268, 1060, 1350, 2143, 2247, 2370, 2401
HpySE526I ACGT 7 cut(s) 11, 438, 647, 1417, 1435, 1521, 2148
Hsp92II CATG 9 cut(s) 607, 672, 906, 1086, 1133, 1301, 1309, 2019, 2138
HspAI GCGC 2 cut(s) 518, 520
KpnI GGTACC 1 cut(s) 1221
Kzo9I GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
LguI GCTCTTC 1 cut(s) 727
LmnI GCTCC 5 cut(s) 51, 660, 1079, 1330, 2453
LweI GCATC 4 cut(s) 1145, 1750, 1960, 2209
MaeI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
MaeII ACGT 7 cut(s) 11, 438, 647, 1417, 1435, 1521, 2148
MaeIII GTNAC 6 cut(s) 439, 793, 809, 837, 1385, 1747
MalI GATC 8 cut(s) 835, 1259, 1617, 1801, 1998, 2542, 2554, 2587
MbiI CCGCTC 2 cut(s) 128, 720
MboI GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
MboII GAAGA 8 cut(s) 353, 359, 604, 714, 717, 935, 1675, 2256
MfeI CAATTG 2 cut(s) 511, 1341
MflI RGATCY 2 cut(s) 1615, 2552
MhlI GDGCHC 5 cut(s) 48, 492, 1292, 1736, 2516
MlsI TGGCCA 1 cut(s) 602
MluI ACGCGT 1 cut(s) 217
MluNI TGGCCA 1 cut(s) 602
MlyI GAGTC 9 cut(s) 182, 239, 248, 260, 284, 390, 1418, 1886, 2269
MmeI TCCRAC 1 cut(s) 432
Mox20I TGGCCA 1 cut(s) 602
MroXI GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
MscI TGGCCA 1 cut(s) 602
MseI TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2593
MslI CAYNNNNRTG 3 cut(s) 404, 608, 1148
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 9 cut(s) 60, 272, 481, 926, 938, 1223, 1578, 1676, 2109
MspI CCGG 3 cut(s) 17, 177, 785
MspR9I CCNGG 6 cut(s) 178, 1071, 1262, 1488, 1723, 2549
MunI CAATTG 2 cut(s) 511, 1341
Mva1269I GAATGC 1 cut(s) 1203
MvaI CCWGG 5 cut(s) 1071, 1262, 1488, 1723, 2549
MvnI CGCG 2 cut(s) 219, 520
NciI CCSGG 1 cut(s) 178
NdeI CATATG 1 cut(s) 2040
NdeII GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
NlaIII CATG 9 cut(s) 607, 672, 906, 1086, 1133, 1301, 1309, 2019, 2138
NlaIV GGNNCC 4 cut(s) 489, 1075, 1219, 1326
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 3 cut(s) 439, 837, 1385
NspI RCATGY 2 cut(s) 1086, 1309
PaeR7I CTCGAG 1 cut(s) 1806
PauI GCGCGC 1 cut(s) 518
PceI AGGCCT 1 cut(s) 374
PciI ACATGT 1 cut(s) 1082
PciSI GCTCTTC 1 cut(s) 727
PctI GAATGC 1 cut(s) 1203
PdmI GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
PflMI CCANNNNNTGG 1 cut(s) 1728
PfoI TCCNGGA 1 cut(s) 1486
PleI GAGTC 9 cut(s) 181, 239, 247, 260, 283, 389, 1417, 1885, 2269
PpsI GAGTC 9 cut(s) 181, 239, 247, 260, 283, 389, 1417, 1885, 2269
Ppu21I YACGTR 2 cut(s) 648, 1418
PscI ACATGT 1 cut(s) 1082
Psp124BI GAGCTC 1 cut(s) 48
Psp1406I AACGTT 1 cut(s) 11
Psp6I CCWGG 5 cut(s) 1069, 1260, 1486, 1721, 2547
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 5 cut(s) 1069, 1260, 1486, 1721, 2547
PspN4I GGNNCC 4 cut(s) 489, 1075, 1219, 1326
PspPI GGNCC 2 cut(s) 446, 684
PspXI VCTCGAGB 1 cut(s) 1806
PsrI GAACNNNNNNTAC 2 cut(s) 1425, 1457
PstNI CAGNNNCTG 3 cut(s) 938, 1676, 2369
PsuI RGATCY 2 cut(s) 1615, 2552
PteI GCGCGC 1 cut(s) 518
PvuII CAGCTG 5 cut(s) 926, 938, 1578, 1676, 2109
RsaI GTAC 7 cut(s) 41, 293, 781, 912, 979, 984, 1219
RsaNI GTAC 7 cut(s) 40, 292, 780, 911, 978, 983, 1218
RseI CAYNNNNRTG 3 cut(s) 404, 608, 1148
SacI GAGCTC 1 cut(s) 48
SapI GCTCTTC 1 cut(s) 727
SaqAI TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2593
Sau3AI GATC 8 cut(s) 833, 1257, 1615, 1799, 1996, 2540, 2552, 2585
Sau96I GGNCC 2 cut(s) 446, 684
SchI GAGTC 9 cut(s) 182, 239, 248, 260, 284, 390, 1418, 1886, 2269
ScrFI CCNGG 6 cut(s) 178, 1071, 1262, 1488, 1723, 2549
SduI GDGCHC 5 cut(s) 48, 492, 1292, 1736, 2516
SfaNI GCATC 4 cut(s) 1145, 1750, 1960, 2209
SfcI CTRYAG 2 cut(s) 376, 2128
Sfr274I CTCGAG 1 cut(s) 1806
SinI GGWCC 2 cut(s) 446, 684
SlaI CTCGAG 1 cut(s) 1806
SmiMI CAYNNNNRTG 3 cut(s) 404, 608, 1148
SmlI CTYRAG 1 cut(s) 1806
SmoI CTYRAG 1 cut(s) 1806
SnaBI TACGTA 1 cut(s) 648
SseBI AGGCCT 1 cut(s) 374
SspI AATATT 4 cut(s) 571, 2026, 2158, 2341
SspMI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
SstI GAGCTC 1 cut(s) 48
StuI AGGCCT 1 cut(s) 374
StyD4I CCNGG 6 cut(s) 176, 1069, 1260, 1486, 1721, 2547
StyI CCWWGG 2 cut(s) 330, 1779
TaaI ACNGT 7 cut(s) 98, 108, 450, 982, 1377, 2132, 2481
TaiI ACGT 7 cut(s) 14, 441, 650, 1420, 1438, 1524, 2151
TaqI TCGA 7 cut(s) 171, 248, 306, 851, 1037, 1807, 2588
TaqII GACCGA 2 cut(s) 300, 324
TatI WGTACW 2 cut(s) 291, 982
TauI GCSGC 2 cut(s) 363, 481
Tru1I TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2593
Tru9I TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2593
TscAI CASTG 4 cut(s) 448, 1048, 1234, 1260
TseFI GTSAC 3 cut(s) 439, 837, 1385
Tsp45I GTSAC 3 cut(s) 439, 837, 1385
TspDTI ATGAA 9 cut(s) 129, 620, 657, 845, 891, 1023, 1869, 2307, 2507
TspGWI ACGGA 3 cut(s) 38, 965, 1411
TspRI CASTG 4 cut(s) 448, 1048, 1234, 1260
Van91I CCANNNNNTGG 1 cut(s) 1728
VpaK11BI GGWCC 2 cut(s) 446, 684
XagI CCTNNNNNAGG 1 cut(s) 1485
XapI RAATTY 5 cut(s) 230, 705, 1894, 2225, 2326
XbaI TCTAGA 2 cut(s) 1618, 2170
XceI RCATGY 2 cut(s) 1086, 1309
XhoI CTCGAG 1 cut(s) 1806
XmnI GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
XspI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.