RLG00000030455

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000877
Physical Location & Seq
Forward (+)
61670532 .. 61679335
8804 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030455

Sequence Viewer

Length: 2103 bp
ATGTTTGCAATTGAAGCACTGCTGTACGACGCGGAGGAGGAAAAGCAAAGCGTCGTCGTATTCTGCATTGCCGTAGCTGCCTTCGAATCTCTGGAGGGGCTGCCAAGGTGTTCGTTGCCACTGGAAGTGCCCTTATGTGATGAGTGGGACAATTGGGCCCGGAATCAGCTTATGGCTGCTGCCTCTGACTTGCTTGGAAAAGTCTATAATATTCAGTATATAATTTATGCAAAGATATGGGTCATGAAGATGAAAGATTTGTTATTTGAAGGAAGTTTGTCTTGTACATATGGAATTAGGAGCCTTTCATGGTGGCTCACTAGGGTCACCCTTCTCCATCAGCGCATTCTCGATGAGAGGTCTTCATCTTTGTTTGACCTTTTGCATAAAGTAACAAGTTATTGGGGTAAGGATTTGCGTAATGGCGAGGGATTGACACTTGTCTCAGTGATTCATCTGGAAGCTGGAATGATGGAACACAGCTATGCACGTGTTGATTCCTGCAGCAGCGCTGGTGTTAAGCTTTCAGTTACAGGGGTTCTTGGCTTCCGTACTATACATGAGGTCGAACCAAAGGCACAAATGGTACTTTTATCAAACACAACATCATCAAAGAGTGGGGCTCTCTGTTCCTCTGAAAGCCCTGGCCCTCATAGATACAATTCTATTGGCAGAAATGATATATCTAAGCATCCATCTGAGTCCCATGAGGCTTCTGATATATTATTGACTTCAAGATTGGTAGAGAATGAGAGCGATTCTGGAGTTATATCAGACGGGATTCAAGTTGGTGGTACTGCTGCTGACCCTTTGAGTGCAATCCATCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGAGCACGCGACATGATGACATGCAGAGATGGGAAATGACTCCACACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGACACGTAGTCACACAAAGGAACGTGCATTGATGATGATGGAAACATTGGTTCAGGGTATCAAGGAGCCCTCTCCAGGAGTGGCAGACAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTTATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTGATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCATTGGGTGACGTTACTAATGATGATGCCTGCTTTAAAAAAGCCCTAGAAGTTTCAAATGATAAGTCGGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGCAGTCTGCGATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATGGGAATATTGAGAAGGCACTAGATGGCTTCACTCGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCTTGTTTGCATATGATAAAAGGGAAGAGTAAAGAAGCTTTTATGGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGCTACCAACTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTACGCGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGCTGAGTTGTTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTAATTCAGCAATGACTGATGATGGAGATAACTTTCCCGTCAGTGGGACCACAAATGCAGAATCTGATGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTTCTTGGAAAAGTTCTACTACAGTTTTATGTAGGATTTGAGATTAATGATAATGTTGGGAAACAATTGACGGATGATGAATTGATTAGAGTAGTTGTGCCTGAACAGAAGATTGTCACTATTTTCAGAATATGGTGGCGTTTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

701

Amino Acids

78.52

Weight (kDa)

5.51

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_2 PF07719 495 - 528 7.4e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1305
AccI GTMKAC 1 cut(s) 989
AccII CGCG 3 cut(s) 32, 871, 1759
AciI CCGC 5 cut(s) 32, 1126, 1153, 1393, 1759
AclWI GGATC 3 cut(s) 829, 1568, 1779
AcsI RAATTY 2 cut(s) 1182, 1471
AcuI CTGAAG 1 cut(s) 1688
AcvI CACGTG 1 cut(s) 491
AdeI CACNNNGTG 1 cut(s) 1409
AfaI GTAC 5 cut(s) 26, 286, 553, 588, 796
AfeI AGCGCT 1 cut(s) 511
AfiI CCNNNNNNNGG 6 cut(s) 1064, 1305, 1583, 1696, 1892, 1893
AflIII ACRYGT 2 cut(s) 490, 992
AgsI TTSAA 8 cut(s) 14, 269, 735, 785, 1259, 1368, 1471, 1675
AhdI GACNNNNNGTC 1 cut(s) 996
AjnI CCWGG 4 cut(s) 643, 837, 1063, 1298
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
Alw21I GWGCWC 2 cut(s) 869, 1944
Alw26I GTCTC 2 cut(s) 448, 1401
AlwI GGATC 3 cut(s) 829, 1568, 1779
AlwNI CAGNNNCTG 2 cut(s) 1253, 1913
Ama87I CYCGRG 3 cut(s) 1383, 1557, 1929
Aor51HI AGCGCT 1 cut(s) 511
AoxI GGCC 3 cut(s) 156, 646, 1464
ApaI GGGCCC 1 cut(s) 160
ApoI RAATTY 2 cut(s) 1182, 1471
ArsI GACNNNNNNTTYG 2 cut(s) 1361, 1393
AseI ATTAAT 1 cut(s) 1998
AspA2I CCTAGG 1 cut(s) 1501
AspLEI GCGC 2 cut(s) 345, 512
AspS9I GGNCC 4 cut(s) 156, 157, 647, 1896
AsuC2I CCSGG 1 cut(s) 160
AsuHPI GGTGA 4 cut(s) 319, 1151, 1331, 1836
AsuII TTCGAA 1 cut(s) 84
AvaI CYCGRG 3 cut(s) 1383, 1557, 1929
AvaII GGWCC 1 cut(s) 1896
AvrII CCTAGG 1 cut(s) 1501
BaeGI GKGCMC 2 cut(s) 132, 160
BanII GRGCYC 3 cut(s) 160, 625, 1059
BbrPI CACGTG 1 cut(s) 491
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 2 cut(s) 869, 1944
BceAI ACGGC 2 cut(s) 56, 1289
BciT130I CCWGG 4 cut(s) 645, 839, 1065, 1300
BciVI GTATCC 1 cut(s) 1491
BclI TGATCA 1 cut(s) 1263
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 2 cut(s) 448, 1401
BfaI CTAG 5 cut(s) 321, 1358, 1502, 1544, 1748
BfmI CTRYAG 5 cut(s) 502, 1110, 1225, 1705, 1973
BfoI RGCGCY 1 cut(s) 513
BfuI GTATCC 1 cut(s) 1491
BglI GCCNNNNNGGC 1 cut(s) 1505
BlnI CCTAGG 1 cut(s) 1501
BlpI GCTNAGC 2 cut(s) 1389, 1938
Bme1390I CCNGG 5 cut(s) 160, 645, 839, 1065, 1300
Bme18I GGWCC 1 cut(s) 1896
BmeRI GACNNNNNGTC 1 cut(s) 996
BmeT110I CYCGRG 3 cut(s) 1383, 1557, 1929
BmgT120I GGNCC 4 cut(s) 156, 157, 647, 1896
BmiI GGNNCC 4 cut(s) 158, 302, 1056, 1897
BmrFI CCNGG 5 cut(s) 160, 645, 839, 1065, 1300
BmsI GCATC 4 cut(s) 700, 947, 1327, 1786
BoxI GACNNNNGTC 1 cut(s) 440
BpiI GAAGAC 1 cut(s) 354
BplI GAGNNNNNCTC 2 cut(s) 607, 639
BpmI CTGGAG 3 cut(s) 113, 783, 1047
Bpu10I CCTNAGC 1 cut(s) 1740
Bpu1102I GCTNAGC 2 cut(s) 1389, 1938
Bpu14I TTCGAA 1 cut(s) 84
BpuMI CCSGG 1 cut(s) 160
BsaAI YACGTR 3 cut(s) 491, 974, 995
BsaBI GATNNNNATC 1 cut(s) 1103
BsaI GGTCTC 1 cut(s) 1401
BsaJI CCNNGG 4 cut(s) 104, 643, 1298, 1501
BsaXI ACNNNNNCTCC 2 cut(s) 1161, 1191
Bsc4I CCNNNNNNNGG 6 cut(s) 1064, 1305, 1583, 1696, 1892, 1893
Bse1I ACTGG 1 cut(s) 126
Bse3DI GCAATG 3 cut(s) 66, 1738, 1866
Bse8I GATNNNNATC 1 cut(s) 1103
BseBI CCWGG 4 cut(s) 645, 839, 1065, 1300
BseDI CCNNGG 4 cut(s) 104, 643, 1298, 1501
BseGI GGATG 3 cut(s) 691, 1528, 2032
BseJI GATNNNNATC 1 cut(s) 1103
BseLI CCNNNNNNNGG 6 cut(s) 1064, 1305, 1583, 1696, 1892, 1893
BseMI GCAATG 3 cut(s) 66, 1738, 1866
BseMII CTCAG 6 cut(s) 459, 690, 941, 1754, 1791, 1929
BseNI ACTGG 1 cut(s) 126
BseRI GAGGAG 1 cut(s) 50
BseSI GKGCMC 2 cut(s) 132, 160
Bsh1236I CGCG 3 cut(s) 32, 871, 1759
BshFI GGCC 3 cut(s) 158, 648, 1466
BsiHKAI GWGCWC 2 cut(s) 869, 1944
BsiHKCI CYCGRG 3 cut(s) 1383, 1557, 1929
BsiSI CCGG 1 cut(s) 160
BslFI GGGAC 3 cut(s) 161, 688, 1909
BslI CCNNNNNNNGG 6 cut(s) 1064, 1305, 1583, 1696, 1892, 1893
BsmAI GTCTC 2 cut(s) 448, 1401
BsmFI GGGAC 3 cut(s) 161, 688, 1909
BsmI GAATGC 1 cut(s) 345
BsnI GGCC 3 cut(s) 158, 648, 1466
Bso31I GGTCTC 1 cut(s) 1401
BsoBI CYCGRG 3 cut(s) 1383, 1557, 1929
Bsp119I TTCGAA 1 cut(s) 84
Bsp120I GGGCCC 1 cut(s) 156
Bsp1286I GDGCHC 6 cut(s) 132, 160, 625, 869, 1059, 1944
Bsp1407I TGTACA 1 cut(s) 284
Bsp143I GATC 4 cut(s) 834, 1263, 1573, 1771
Bsp1720I GCTNAGC 2 cut(s) 1389, 1938
BspACI CCGC 5 cut(s) 32, 1126, 1153, 1393, 1759
BspANI GGCC 3 cut(s) 158, 648, 1466
BspCNI CTCAG 6 cut(s) 458, 691, 940, 1753, 1792, 1930
BspFNI CGCG 3 cut(s) 32, 871, 1759
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 4 cut(s) 158, 302, 1056, 1897
BspMAI CTGCAG 1 cut(s) 506
BspPI GGATC 3 cut(s) 829, 1568, 1779
BspQI GCTCTTC 1 cut(s) 857
BspT104I TTCGAA 1 cut(s) 84
BspTNI GGTCTC 1 cut(s) 1401
BsrDI GCAATG 3 cut(s) 66, 1738, 1866
BsrGI TGTACA 1 cut(s) 284
BsrI ACTGG 1 cut(s) 126
BssECI CCNNGG 4 cut(s) 104, 643, 1298, 1501
BssMI GATC 4 cut(s) 834, 1263, 1573, 1771
BssT1I CCWWGG 2 cut(s) 104, 1501
Bst2UI CCWGG 4 cut(s) 645, 839, 1065, 1300
Bst4CI ACNGT 4 cut(s) 1114, 1139, 1695, 1977
Bst6I CTCTTC 2 cut(s) 857, 1625
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstAUI TGTACA 1 cut(s) 284
BstBAI YACGTR 3 cut(s) 491, 974, 995
BstBI TTCGAA 1 cut(s) 84
BstC8I GCNNGC 3 cut(s) 869, 1342, 1405
BstDEI CTNAG 9 cut(s) 445, 687, 699, 927, 1389, 1740, 1800, 1938, 1945
BstEII GGTNACC 1 cut(s) 325
BstF5I GGATG 3 cut(s) 691, 1528, 2032
BstFNI CGCG 3 cut(s) 32, 871, 1759
BstH2I RGCGCY 1 cut(s) 513
BstHHI GCGC 2 cut(s) 345, 512
BstKTI GATC 4 cut(s) 837, 1266, 1576, 1774
BstMAI GTCTC 2 cut(s) 448, 1401
BstMBI GATC 4 cut(s) 834, 1263, 1573, 1771
BstMWI GCNNNNNNNGC 6 cut(s) 14, 77, 1409, 1505, 1649, 1751
BstNI CCWGG 4 cut(s) 645, 839, 1065, 1300
BstNSI RCATGY 1 cut(s) 886
BstPAI GACNNNNGTC 1 cut(s) 440
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 5 cut(s) 158, 643, 837, 1063, 1298
BstSFI CTRYAG 5 cut(s) 502, 1110, 1225, 1705, 1973
BstSLI GKGCMC 2 cut(s) 132, 160
BstSNI TACGTA 1 cut(s) 974
BstUI CGCG 3 cut(s) 32, 871, 1759
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 1771
BstYI RGATCY 1 cut(s) 1771
BsuI GTATCC 1 cut(s) 1491
BsuRI GGCC 3 cut(s) 158, 648, 1466
BtgZI GCGATG 1 cut(s) 1475
BtsCI GGATG 3 cut(s) 691, 1528, 2032
BtsI GCAGTG 3 cut(s) 17, 837, 1414
BtsIMutI CAGTG 7 cut(s) 17, 119, 453, 837, 1414, 1664, 1897
Cac8I GCNNGC 3 cut(s) 869, 1342, 1405
CaiI CAGNNNCTG 2 cut(s) 1253, 1913
CciI TCATGA 1 cut(s) 243
CfoI GCGC 2 cut(s) 345, 512
Cfr13I GGNCC 4 cut(s) 156, 157, 647, 1896
CseI GACGC 2 cut(s) 38, 40
Csp6I GTAC 5 cut(s) 25, 285, 552, 587, 795
CviAII CATG 9 cut(s) 244, 309, 560, 707, 875, 883, 1593, 1712, 1837
CviQI GTAC 5 cut(s) 25, 285, 552, 587, 795
DdeI CTNAG 9 cut(s) 445, 687, 699, 927, 1389, 1740, 1800, 1938, 1945
DpnI GATC 4 cut(s) 836, 1265, 1575, 1773
DpnII GATC 4 cut(s) 834, 1263, 1573, 1771
DraI TTTAAA 1 cut(s) 1348
DraIII CACNNNGTG 1 cut(s) 1409
DriI GACNNNNNGTC 1 cut(s) 996
Eam1104I CTCTTC 2 cut(s) 857, 1625
Eam1105I GACNNNNNGTC 1 cut(s) 996
EarI CTCTTC 2 cut(s) 857, 1625
Eco105I TACGTA 1 cut(s) 974
Eco130I CCWWGG 2 cut(s) 104, 1501
Eco24I GRGCYC 3 cut(s) 160, 625, 1059
Eco31I GGTCTC 1 cut(s) 1401
Eco47I GGWCC 1 cut(s) 1896
Eco47III AGCGCT 1 cut(s) 511
Eco57I CTGAAG 1 cut(s) 1688
Eco72I CACGTG 1 cut(s) 491
Eco88I CYCGRG 3 cut(s) 1383, 1557, 1929
Eco91I GGTNACC 1 cut(s) 325
EcoO65I GGTNACC 1 cut(s) 325
EcoRI GAATTC 1 cut(s) 1471
EcoRII CCWGG 4 cut(s) 643, 837, 1063, 1298
EcoT14I CCWWGG 2 cut(s) 104, 1501
EcoT38I GRGCYC 3 cut(s) 160, 625, 1059
ErhI CCWWGG 2 cut(s) 104, 1501
FaeI CATG 9 cut(s) 247, 312, 563, 710, 878, 886, 1596, 1715, 1840
FalI AAGNNNNNCTT 4 cut(s) 265, 297, 1825, 1857
FaqI GGGAC 3 cut(s) 161, 688, 1909
FatI CATG 9 cut(s) 243, 308, 559, 706, 874, 882, 1592, 1711, 1836
FauNDI CATATG 2 cut(s) 289, 1617
FbaI TGATCA 1 cut(s) 1263
FblI GTMKAC 1 cut(s) 989
FokI GGATG 3 cut(s) 678, 1535, 2039
FriOI GRGCYC 3 cut(s) 160, 625, 1059
FspBI CTAG 5 cut(s) 321, 1358, 1502, 1544, 1748
GlaI GCGC 2 cut(s) 344, 511
GsuI CTGGAG 3 cut(s) 113, 783, 1047
HaeII RGCGCY 1 cut(s) 513
HaeIII GGCC 3 cut(s) 158, 648, 1466
HapII CCGG 1 cut(s) 160
HgaI GACGC 2 cut(s) 38, 40
HhaI GCGC 2 cut(s) 345, 512
Hin1II CATG 9 cut(s) 247, 312, 563, 710, 878, 886, 1596, 1715, 1840
Hin6I GCGC 2 cut(s) 343, 510
HinP1I GCGC 2 cut(s) 343, 510
HincII GTYRAC 1 cut(s) 990
HindII GTYRAC 1 cut(s) 990
HindIII AAGCTT 2 cut(s) 521, 1641
HpaII CCGG 1 cut(s) 160
HphI GGTGA 4 cut(s) 319, 1151, 1331, 1836
Hpy166II GTNNAC 2 cut(s) 990, 1142
Hpy188I TCNGA 9 cut(s) 187, 637, 700, 718, 775, 1215, 1282, 1915, 2081
Hpy8I GTNNAC 2 cut(s) 990, 1142
Hpy99I CGWCG 4 cut(s) 32, 56, 59, 957
HpyAV CCTTC 7 cut(s) 91, 263, 341, 860, 1123, 1531, 1756
HpyCH4III ACNGT 4 cut(s) 1114, 1139, 1695, 1977
HpyCH4IV ACGT 5 cut(s) 490, 973, 994, 1012, 1323
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 77, 1409, 1505, 1649, 1751
HpyF3I CTNAG 9 cut(s) 445, 687, 699, 927, 1389, 1740, 1800, 1938, 1945
HpySE526I ACGT 5 cut(s) 490, 973, 994, 1012, 1323
Hsp92II CATG 9 cut(s) 247, 312, 563, 710, 878, 886, 1596, 1715, 1840
HspAI GCGC 2 cut(s) 343, 510
Ksp22I TGATCA 1 cut(s) 1263
Kzo9I GATC 4 cut(s) 834, 1263, 1573, 1771
LguI GCTCTTC 1 cut(s) 857
LmnI GCTCC 2 cut(s) 300, 1054
LweI GCATC 4 cut(s) 700, 947, 1327, 1786
MaeI CTAG 5 cut(s) 321, 1358, 1502, 1544, 1748
MaeII ACGT 5 cut(s) 490, 973, 994, 1012, 1323
MaeIII GTNAC 7 cut(s) 325, 391, 529, 998, 1319, 1324, 2068
MalI GATC 4 cut(s) 836, 1265, 1575, 1773
MboI GATC 4 cut(s) 834, 1263, 1573, 1771
MboII GAAGA 5 cut(s) 259, 354, 874, 1642, 2074
MfeI CAATTG 4 cut(s) 9, 151, 918, 2018
MflI RGATCY 1 cut(s) 1771
MhlI GDGCHC 6 cut(s) 132, 160, 625, 869, 1059, 1944
MlyI GAGTC 3 cut(s) 710, 895, 995
MmeI TCCRAC 2 cut(s) 1749, 1788
MseI TTAA 4 cut(s) 519, 1347, 1517, 1998
MslI CAYNNNNRTG 2 cut(s) 248, 483
MspA1I CMGCKG 2 cut(s) 1155, 1253
MspI CCGG 1 cut(s) 160
MspR9I CCNGG 5 cut(s) 160, 645, 839, 1065, 1300
MunI CAATTG 4 cut(s) 9, 151, 918, 2018
Mva1269I GAATGC 1 cut(s) 345
MvaI CCWGG 4 cut(s) 645, 839, 1065, 1300
MvnI CGCG 3 cut(s) 32, 871, 1759
MwoI GCNNNNNNNGC 6 cut(s) 14, 77, 1409, 1505, 1649, 1751
NciI CCSGG 1 cut(s) 160
NdeI CATATG 2 cut(s) 289, 1617
NdeII GATC 4 cut(s) 834, 1263, 1573, 1771
NlaIII CATG 9 cut(s) 247, 312, 563, 710, 878, 886, 1596, 1715, 1840
NlaIV GGNNCC 4 cut(s) 158, 302, 1056, 1897
NmuCI GTSAC 4 cut(s) 325, 998, 1319, 2068
NspI RCATGY 1 cut(s) 886
NspV TTCGAA 1 cut(s) 84
PagI TCATGA 1 cut(s) 243
PciSI GCTCTTC 1 cut(s) 857
PctI GAATGC 1 cut(s) 345
PfeI GAWTC 9 cut(s) 86, 163, 451, 497, 758, 781, 923, 1081, 1910
PflMI CCANNNNNTGG 1 cut(s) 1305
PfoI TCCNGGA 1 cut(s) 1063
PleI GAGTC 3 cut(s) 709, 895, 994
PmaCI CACGTG 1 cut(s) 491
PmlI CACGTG 1 cut(s) 491
PpsI GAGTC 3 cut(s) 709, 895, 994
Ppu21I YACGTR 3 cut(s) 491, 974, 995
PshAI GACNNNNGTC 1 cut(s) 440
PshBI ATTAAT 1 cut(s) 1998
Psp6I CCWGG 4 cut(s) 643, 837, 1063, 1298
PspCI CACGTG 1 cut(s) 491
PspEI GGTNACC 1 cut(s) 325
PspGI CCWGG 4 cut(s) 643, 837, 1063, 1298
PspN4I GGNNCC 4 cut(s) 158, 302, 1056, 1897
PspOMI GGGCCC 1 cut(s) 156
PspPI GGNCC 4 cut(s) 156, 157, 647, 1896
PstI CTGCAG 1 cut(s) 506
PstNI CAGNNNCTG 2 cut(s) 1253, 1913
PsuI RGATCY 1 cut(s) 1771
PvuII CAGCTG 1 cut(s) 1253
RsaI GTAC 5 cut(s) 26, 286, 553, 588, 796
RsaNI GTAC 5 cut(s) 25, 285, 552, 587, 795
RseI CAYNNNNRTG 2 cut(s) 248, 483
SalI GTCGAC 1 cut(s) 988
SapI GCTCTTC 1 cut(s) 857
SaqAI TTAA 4 cut(s) 519, 1347, 1517, 1998
Sau3AI GATC 4 cut(s) 834, 1263, 1573, 1771
Sau96I GGNCC 4 cut(s) 156, 157, 647, 1896
SchI GAGTC 3 cut(s) 710, 895, 995
ScrFI CCNGG 5 cut(s) 160, 645, 839, 1065, 1300
SduI GDGCHC 6 cut(s) 132, 160, 625, 869, 1059, 1944
SfaNI GCATC 4 cut(s) 700, 947, 1327, 1786
SfcI CTRYAG 5 cut(s) 502, 1110, 1225, 1705, 1973
SfuI TTCGAA 1 cut(s) 84
SinI GGWCC 1 cut(s) 1896
SmiMI CAYNNNNRTG 2 cut(s) 248, 483
SnaBI TACGTA 1 cut(s) 974
SsiI CCGC 5 cut(s) 32, 1126, 1153, 1393, 1759
SspI AATATT 3 cut(s) 211, 1531, 1603
SspMI CTAG 5 cut(s) 321, 1358, 1502, 1544, 1748
StyD4I CCNGG 5 cut(s) 158, 643, 837, 1063, 1298
StyI CCWWGG 2 cut(s) 104, 1501
TaaI ACNGT 4 cut(s) 1114, 1139, 1695, 1977
TaiI ACGT 5 cut(s) 493, 976, 997, 1015, 1326
TaqI TCGA 5 cut(s) 84, 351, 567, 912, 989
TatI WGTACW 1 cut(s) 284
TfiI GAWTC 9 cut(s) 86, 163, 451, 497, 758, 781, 923, 1081, 1910
Tru1I TTAA 4 cut(s) 519, 1347, 1517, 1998
Tru9I TTAA 4 cut(s) 519, 1347, 1517, 1998
TscAI CASTG 7 cut(s) 24, 126, 453, 837, 1414, 1671, 1897
TseFI GTSAC 4 cut(s) 325, 998, 1319, 2068
Tsp45I GTSAC 4 cut(s) 325, 998, 1319, 2068
TspDTI ATGAA 7 cut(s) 260, 266, 297, 354, 443, 1302, 2046
TspGWI ACGGA 2 cut(s) 539, 2039
TspRI CASTG 7 cut(s) 24, 126, 453, 837, 1414, 1671, 1897
Van91I CCANNNNNTGG 1 cut(s) 1305
VpaK11BI GGWCC 1 cut(s) 1896
VspI ATTAAT 1 cut(s) 1998
XapI RAATTY 2 cut(s) 1182, 1471
XbaI TCTAGA 1 cut(s) 1747
XceI RCATGY 1 cut(s) 886
XmaJI CCTAGG 1 cut(s) 1501
XmiI GTMKAC 1 cut(s) 989
XspI CTAG 5 cut(s) 321, 1358, 1502, 1544, 1748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.