Prupe.2G030300_v2.0.a1

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000877
Physical Location & Seq
Reverse (-)
3215884 .. 3229286
13403 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G030300.1

Sequence Viewer

Length: 2721 bp
ATGTCCGAAACGTCACCGGAACTCCCAATCCTCCGCGGGTACGAGCTGCGTCTCCTCCGCTGCACCCTCCAGTCCCCGGCGTCCGATCCCTCACCTCATCCCCAACCGTCCGATCATGCCCACCCCACCCACCACCTCCACCCTCTAATCAACGACCTCTTAACTTCCATCGAGTCGGGCCACTACCTCCAAGCCCTCACCTCCCCCGACGTAAAGCGCGTCGTTTTCAAACTCGCCGAGTCTGACTCGTTCGGAGACTCGGCGGAGTGCGCTGACAGAGTGTACTCCGAGTTGCTGGACCGAGTTGAGTCGTTTATATCCAAGGAATGCGAAGAAGAAGAGAATGATAGTGGCAAGGACAAGGCCTACAGAGTCATCGTGGTTCTGTGCATTGCCGTGGCTGCCTTGTTCGGTTTTGCTCAATGTAACTTGACTGGACCGTTGGAGGGGTTGCCAAAGTGTCCTCTGCCACTGGAAGTGCCTCAATGTGATGAGTGGGAGAATTGGGCGCGTAATCAGCTTATGGCTGCTGGGTCTGACTTGCTTGGAAAGTTATCCAATATTCAGTATATAGTTTATGCGAAGATGCTGGCCATGAAGATGAAAGATTTGTTATTTGACAGAAGTGTGCCTTGTACGTATGGAATTAGGAGCATTTCATGGTGGCTCATTAGGATCACCCTTCTCCATCAAAGAGTTCTTGATGACCGGTCTTCTTCTCTGTTCAATCTTTTGCAAGTCTTTACGAGTGAAACTTTGAATCATTTTGGCACTTTGGAGAAAGTAACAACTTATTGGGGTAACAATTTACGTAATGGTGAGGGTTCGTCACTTGTCTCAATGATTTATCTGGAAGCTGGAATAATGGAATACACCTATGCAAGAGTTGATTCATGCAGGCTACATTTTGAATCAGCTGAAGCAGCAGCTGGTCTTCAGCTTTCTGTTACAGGTGTTCTTGGATTCCGTACTGTACATCAGGTAGAACCAAAGGCACAAATGGTACTTTTAGCAAACCCAACTTCTTCGAACAGTAGTGGTAGCTGCTTCGCAGAAAGCCCTGGCTCCCAGACAAACAATTCTAGCATTGGCAATCTGCATCCATCTGAAACCTATGAGGCCTCTGACATATTAATGACCCCAAAATTGTTAGGGAATGATAGCAATTCTGGAATTCTTTCAGAAGGCATTCGCGGTGGTACTGCTGCTGTTCCTTTGAGTGCAGTCCATCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGGGTACACGACATGATGAAATGCAAAGATGGGAAATGGCTCCTTACATAGAGGCAATTAATTCTCAGCAGTCGTCATACTTTATTATACGATATTTCTGTGACATCCTGCGGATTCGGTGGGAGTCAACGCGTAGTCACACAAAGGAACGTGCACTGATGATGATGGAAAAATTGGTTCAGGGTATCTATGACCCTTCTCCAGGAGTGGCGGAAAGGATTCTTTTCTGCTATGGCGTTCAAATTCCTACCATTCCTGCCCTGCGGAAGGAATATGGTGAACTTTTAGTTGGCTGTGGTCTTATAGGAGAGGCGGTTAAAACTTTTGAGGATTTAGAGTTATGGGATAATCTTATATTCTGCTACCGCCTATTGCAGAAGAAAGCAGCAGCTGTTGAACTGATCAAGACACGACTTTCTGAAACACCCAATGACCCCAGGTTATGGTGCTCATTGGGTGATGTTACTAATGATGATGCCTGCTTTGAAAAAGCCCTGGAAGTTTCAAATGATAGATCAGCTCGAGCCAAGCGGTCTCTTGCTCGCAGTGCATACAATAGAGGGGACTATGAAAAATCAAAAACCCTATGGGAGTCTGCAATGGCCTTGAATTCTTTGTATCCCGATGGCTGGTTTGCACTTGGGGCTGCTGCGTTGAAGGCTAGGGATACTGAAAAGGCATTGGATGCTTTTACTCGGGCTGTTCAACTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCTTGTTTGCATATGATAAAAAAGAAGAGTAAAGAATCCTTCATTGCATTTAGAGAAGCTCTGAAATTCAAACGAAACAGCTGGCAACTGTGGGAGAACTACAGCCATGTTGCCGTAGATGTTGGCAATGTTGGTCAGGGTCTAGAAGCTGCAAGGATGGTGTTGGATATTACTAATAATAAAAGAATTGATGCTGAATTATTGGAAAGAATTGTGGCTGAAGTCGAAATAAGGGCTTCACATACGACTCCAGATATGACGGATGAAGATAACTGTTCCACTGAGGTGGGAAAATCTCGGGAAACTGAGCACTTAGTAGAGTTCCTTGGAAAAGTTCTACAGCAGATAGTTCGAAGTGGAAATGGAGCAGATATTTGGGGTTTGTATGCAAGGTGGCACAAAATGAAAGGAGACCTTACAATGTGCTCTGAAGCTTTATTAAAGCAAGTTAGATCATACCAGGGATCTGATTTGTGGAAAGATAGAGATCGGTTTAAGAAGTTTGCTCAATCATCCTTGGAACTCTGTAAGGTGTATATGGAAATTTCTGCATCTACTGGTAGCCGTCGTGAACTGCTTACAGCAGAGATGCACCTAAAGAACACAATTAAACAGGCTGTGAGTTTCTCAGACATGGAAGAACTTCAGGATCTTAAAGCTTGCCTTCATCAAGTGAAGTCAAAACTCGAATCCGATTCCCTATGTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

907

Amino Acids

101.6

Weight (kDa)

5.67

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1710
AccII CGCG 5 cut(s) 36, 219, 511, 1194, 1399
AclWI GGATC 6 cut(s) 80, 683, 1234, 1973, 2482, 2667
AcoI YGGCCR 1 cut(s) 591
AcsI RAATTY 5 cut(s) 1173, 1509, 1876, 2075, 2553
AcuI CTGAAG 5 cut(s) 920, 939, 2250, 2460, 2639
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 8 cut(s) 41, 284, 637, 970, 975, 1005, 1201, 1273
AfiI CCNNNNNNNGG 7 cut(s) 76, 446, 1469, 1534, 1710, 1896, 1988
AflIII ACRYGT 1 cut(s) 1397
AgeI ACCGGT 1 cut(s) 708
AjnI CCWGG 6 cut(s) 1060, 1242, 1468, 1703, 1761, 2469
AjuI GAANNNNNNNTTGG 2 cut(s) 1539, 1571
AleI CACNNNNGTG 1 cut(s) 2294
AloI GAACNNNNNNTCC 2 cut(s) 12, 44
Alw21I GWGCWC 4 cut(s) 1423, 1718, 2322, 2438
Alw26I GTCTC 5 cut(s) 56, 249, 841, 1806, 2415
Alw44I GTGCAC 1 cut(s) 1419
AlwI GGATC 6 cut(s) 80, 683, 1234, 1973, 2482, 2667
AlwNI CAGNNNCTG 2 cut(s) 929, 1658
Ama87I CYCGRG 3 cut(s) 1788, 1962, 2307
AoxI GGCC 5 cut(s) 178, 363, 591, 1119, 1869
ApaLI GTGCAC 1 cut(s) 1419
ApoI RAATTY 5 cut(s) 1173, 1509, 1876, 2075, 2553
AseI ATTAAT 2 cut(s) 1133, 1326
AsiGI ACCGGT 1 cut(s) 708
Asp700I GAANNNNTTC 4 cut(s) 1177, 1188, 1485, 2652
AspLEI GCGC 3 cut(s) 219, 272, 511
AspS9I GGNCC 3 cut(s) 178, 298, 437
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 7 cut(s) 6, 84, 190, 670, 830, 1556, 1736
AsuII TTCGAA 2 cut(s) 1028, 2362
AvaI CYCGRG 3 cut(s) 1788, 1962, 2307
AvaII GGWCC 2 cut(s) 298, 437
BaeGI GKGCMC 1 cut(s) 1423
BalI TGGCCA 1 cut(s) 593
BbsI GAAGAC 2 cut(s) 705, 926
Bbv12I GWGCWC 4 cut(s) 1423, 1718, 2322, 2438
BccI CCATC 8 cut(s) 176, 696, 1111, 1236, 1290, 1426, 1886, 2161
BceAI ACGGC 3 cut(s) 380, 2108, 2559
BcgI CGANNNNNNTGC 2 cut(s) 2342, 2376
BciT130I CCWGG 6 cut(s) 1062, 1244, 1470, 1705, 1763, 2471
BciVI GTATCC 2 cut(s) 1896, 1927
BclI TGATCA 1 cut(s) 1668
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 5 cut(s) 56, 249, 841, 1806, 2415
BfaI CTAG 3 cut(s) 1083, 1929, 2153
BfmI CTRYAG 3 cut(s) 367, 2110, 2348
BfuI GTATCC 2 cut(s) 1896, 1927
Bme1390I CCNGG 7 cut(s) 77, 1062, 1244, 1470, 1705, 1763, 2471
Bme18I GGWCC 2 cut(s) 298, 437
BmeT110I CYCGRG 3 cut(s) 1788, 1962, 2307
BmgT120I GGNCC 3 cut(s) 178, 298, 437
BmiI GGNNCC 2 cut(s) 1066, 1308
BmrFI CCNGG 7 cut(s) 77, 1062, 1244, 1470, 1705, 1763, 2471
BmsI GCATC 7 cut(s) 576, 1108, 1732, 1942, 2191, 2570, 2589
BpiI GAAGAC 2 cut(s) 705, 926
BplI GAGNNNNNCTC 2 cut(s) 230, 262
BpmI CTGGAG 3 cut(s) 53, 1452, 2244
Bpu14I TTCGAA 2 cut(s) 1028, 2362
BpuMI CCSGG 1 cut(s) 77
BsaAI YACGTR 2 cut(s) 639, 812
BsaBI GATNNNNATC 1 cut(s) 2496
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 2 cut(s) 1806, 2415
BsaWI WCCGGW 2 cut(s) 16, 708
BsaXI ACNNNNNCTCC 4 cut(s) 6, 36, 1566, 1596
Bsc4I CCNNNNNNNGG 7 cut(s) 76, 446, 1469, 1534, 1710, 1896, 1988
Bse118I RCCGGY 1 cut(s) 708
Bse1I ACTGG 4 cut(s) 70, 439, 477, 2572
Bse3DI GCAATG 4 cut(s) 390, 1872, 2052, 2143
Bse8I GATNNNNATC 1 cut(s) 2496
BseBI CCWGG 6 cut(s) 1062, 1244, 1470, 1705, 1763, 2471
BseGI GGATG 7 cut(s) 97, 1099, 1371, 1957, 2172, 2278, 2522
BseJI GATNNNNATC 1 cut(s) 2496
BseLI CCNNNNNNNGG 7 cut(s) 76, 446, 1469, 1534, 1710, 1896, 1988
BseMI GCAATG 4 cut(s) 390, 1872, 2052, 2143
BseMII CTCAG 4 cut(s) 1346, 2283, 2307, 2652
BseNI ACTGG 4 cut(s) 70, 439, 477, 2572
BseRI GAGGAG 1 cut(s) 44
BseSI GKGCMC 1 cut(s) 1423
BseYI CCCAGC 1 cut(s) 530
BsgI GTGCAG 2 cut(s) 46, 1242
Bsh1236I CGCG 5 cut(s) 36, 219, 511, 1194, 1399
BshFI GGCC 5 cut(s) 180, 365, 593, 1121, 1871
BshTI ACCGGT 1 cut(s) 708
BsiHKAI GWGCWC 4 cut(s) 1423, 1718, 2322, 2438
BsiHKCI CYCGRG 3 cut(s) 1788, 1962, 2307
BsiSI CCGG 3 cut(s) 17, 77, 709
BslFI GGGAC 2 cut(s) 58, 1844
BslI CCNNNNNNNGG 7 cut(s) 76, 446, 1469, 1534, 1710, 1896, 1988
BsmAI GTCTC 5 cut(s) 56, 249, 841, 1806, 2415
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 2 cut(s) 58, 1844
BsmI GAATGC 2 cut(s) 332, 1188
BsnI GGCC 5 cut(s) 180, 365, 593, 1121, 1871
Bso31I GGTCTC 2 cut(s) 1806, 2415
BsoBI CYCGRG 3 cut(s) 1788, 1962, 2307
Bsp119I TTCGAA 2 cut(s) 1028, 2362
Bsp1286I GDGCHC 4 cut(s) 1423, 1718, 2322, 2438
Bsp1407I TGTACA 1 cut(s) 973
BspANI GGCC 5 cut(s) 180, 365, 593, 1121, 1871
BspCNI CTCAG 4 cut(s) 1345, 2284, 2308, 2651
BspFNI CGCG 5 cut(s) 36, 219, 511, 1194, 1399
BspLI GGNNCC 2 cut(s) 1066, 1308
BspPI GGATC 6 cut(s) 80, 683, 1234, 1973, 2482, 2667
BspT104I TTCGAA 2 cut(s) 1028, 2362
BspTNI GGTCTC 2 cut(s) 1806, 2415
BsrDI GCAATG 4 cut(s) 390, 1872, 2052, 2143
BsrFI RCCGGY 1 cut(s) 708
BsrGI TGTACA 1 cut(s) 973
BsrI ACTGG 4 cut(s) 70, 439, 477, 2572
BssAI RCCGGY 1 cut(s) 708
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 3 cut(s) 321, 2335, 2526
Bst2UI CCWGG 6 cut(s) 1062, 1244, 1470, 1705, 1763, 2471
Bst4CI ACNGT 6 cut(s) 108, 441, 973, 1034, 2100, 2285
Bst6I CTCTTC 2 cut(s) 333, 2030
BstACI GRCGYC 1 cut(s) 80
BstAPI GCANNNNNTGC 1 cut(s) 1952
BstAUI TGTACA 1 cut(s) 973
BstBAI YACGTR 2 cut(s) 639, 812
BstBI TTCGAA 2 cut(s) 1028, 2362
BstC8I GCNNGC 6 cut(s) 591, 899, 1747, 1810, 2093, 2671
BstDEI CTNAG 5 cut(s) 1332, 2292, 2316, 2323, 2638
BstDSI CCRYGG 2 cut(s) 34, 396
BstENI CCTNNNNNAGG 2 cut(s) 1467, 1532
BstF5I GGATG 7 cut(s) 97, 1099, 1371, 1957, 2172, 2278, 2522
BstFNI CGCG 5 cut(s) 36, 219, 511, 1194, 1399
BstHHI GCGC 3 cut(s) 219, 272, 511
BstMAI GTCTC 5 cut(s) 56, 249, 841, 1806, 2415
BstMWI GCNNNNNNNGC 8 cut(s) 269, 401, 517, 923, 1814, 1910, 1925, 1952
BstNI CCWGG 6 cut(s) 1062, 1244, 1470, 1705, 1763, 2471
BstSCI CCNGG 7 cut(s) 75, 1060, 1242, 1468, 1703, 1761, 2469
BstSFI CTRYAG 3 cut(s) 367, 2110, 2348
BstSLI GKGCMC 1 cut(s) 1423
BstSNI TACGTA 2 cut(s) 639, 812
BstUI CGCG 5 cut(s) 36, 219, 511, 1194, 1399
BstV2I GAAGAC 2 cut(s) 705, 926
BstX2I RGATCY 2 cut(s) 2474, 2659
BstXI CCANNNNNNTGG 1 cut(s) 2296
BstYI RGATCY 2 cut(s) 2474, 2659
BsuI GTATCC 2 cut(s) 1896, 1927
BsuRI GGCC 5 cut(s) 180, 365, 593, 1121, 1871
BtgI CCRYGG 2 cut(s) 34, 396
BtsCI GGATG 7 cut(s) 97, 1099, 1371, 1957, 2172, 2278, 2522
BtsI GCAGTG 2 cut(s) 1242, 1819
BtsIMutI CAGTG 5 cut(s) 470, 1242, 1421, 1819, 2289
Cac8I GCNNGC 6 cut(s) 591, 899, 1747, 1810, 2093, 2671
CaiI CAGNNNCTG 2 cut(s) 929, 1658
CfoI GCGC 3 cut(s) 219, 272, 511
Cfr10I RCCGGY 1 cut(s) 708
Cfr13I GGNCC 3 cut(s) 178, 298, 437
Cfr42I CCGCGG 1 cut(s) 37
CseI GACGC 3 cut(s) 38, 69, 208
Csp6I GTAC 8 cut(s) 40, 283, 636, 969, 974, 1004, 1200, 1272
CspAI ACCGGT 1 cut(s) 708
CviAII CATG 8 cut(s) 116, 595, 660, 894, 1280, 1998, 2117, 2644
CviQI GTAC 8 cut(s) 40, 283, 636, 969, 974, 1004, 1200, 1272
DdeI CTNAG 5 cut(s) 1332, 2292, 2316, 2323, 2638
EaeI YGGCCR 1 cut(s) 591
Eam1104I CTCTTC 2 cut(s) 333, 2030
EarI CTCTTC 2 cut(s) 333, 2030
EciI GGCGGA 2 cut(s) 278, 1493
Eco105I TACGTA 2 cut(s) 639, 812
Eco130I CCWWGG 3 cut(s) 321, 2335, 2526
Eco147I AGGCCT 2 cut(s) 365, 1121
Eco31I GGTCTC 2 cut(s) 1806, 2415
Eco47I GGWCC 2 cut(s) 298, 437
Eco57I CTGAAG 5 cut(s) 920, 939, 2250, 2460, 2639
Eco88I CYCGRG 3 cut(s) 1788, 1962, 2307
EcoNI CCTNNNNNAGG 2 cut(s) 1467, 1532
EcoRI GAATTC 2 cut(s) 1173, 1876
EcoRII CCWGG 6 cut(s) 1060, 1242, 1468, 1703, 1761, 2469
EcoT14I CCWWGG 3 cut(s) 321, 2335, 2526
ErhI CCWWGG 3 cut(s) 321, 2335, 2526
Esp3I CGTCTC 1 cut(s) 56
FaeI CATG 8 cut(s) 119, 598, 663, 897, 1283, 2001, 2120, 2647
FalI AAGNNNNNCTT 6 cut(s) 616, 648, 2409, 2441, 2658, 2690
FaqI GGGAC 2 cut(s) 58, 1844
FatI CATG 8 cut(s) 115, 594, 659, 893, 1279, 1997, 2116, 2643
FauI CCCGC 1 cut(s) 29
FauNDI CATATG 1 cut(s) 2022
FbaI TGATCA 1 cut(s) 1668
FokI GGATG 7 cut(s) 84, 1086, 1358, 1964, 2179, 2285, 2509
FspBI CTAG 3 cut(s) 1083, 1929, 2153
GlaI GCGC 3 cut(s) 218, 271, 510
GsaI CCCAGC 1 cut(s) 534
GsuI CTGGAG 3 cut(s) 53, 1452, 2244
HaeIII GGCC 5 cut(s) 180, 365, 593, 1121, 1871
HapII CCGG 3 cut(s) 17, 77, 709
HgaI GACGC 3 cut(s) 38, 69, 208
HhaI GCGC 3 cut(s) 219, 272, 511
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 8 cut(s) 119, 598, 663, 897, 1283, 2001, 2120, 2647
Hin6I GCGC 3 cut(s) 217, 270, 509
HinP1I GCGC 3 cut(s) 217, 270, 509
HincII GTYRAC 1 cut(s) 1395
HindII GTYRAC 1 cut(s) 1395
HindIII AAGCTT 2 cut(s) 2442, 2667
HpaII CCGG 3 cut(s) 17, 77, 709
HphI GGTGA 7 cut(s) 6, 84, 190, 670, 830, 1556, 1736
Hpy166II GTNNAC 6 cut(s) 283, 1274, 1395, 1421, 1547, 2582
Hpy8I GTNNAC 6 cut(s) 283, 1274, 1395, 1421, 1547, 2582
Hpy99I CGWCG 3 cut(s) 212, 224, 2580
HpyAV CCTTC 9 cut(s) 692, 1178, 1261, 1265, 1473, 1528, 1918, 2059, 2684
HpyCH4III ACNGT 6 cut(s) 108, 441, 973, 1034, 2100, 2285
HpyCH4IV ACGT 5 cut(s) 11, 210, 638, 811, 1417
HpyF10VI GCNNNNNNNGC 8 cut(s) 269, 401, 517, 923, 1814, 1910, 1925, 1952
HpyF3I CTNAG 5 cut(s) 1332, 2292, 2316, 2323, 2638
HpySE526I ACGT 5 cut(s) 11, 210, 638, 811, 1417
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 8 cut(s) 119, 598, 663, 897, 1283, 2001, 2120, 2647
HspAI GCGC 3 cut(s) 217, 270, 509
Ksp22I TGATCA 1 cut(s) 1668
KspI CCGCGG 1 cut(s) 37
LmnI GCTCC 4 cut(s) 651, 1070, 1312, 2375
LweI GCATC 7 cut(s) 576, 1108, 1732, 1942, 2191, 2570, 2589
MaeI CTAG 3 cut(s) 1083, 1929, 2153
MaeII ACGT 5 cut(s) 11, 210, 638, 811, 1417
MaeIII GTNAC 9 cut(s) 12, 425, 784, 800, 828, 946, 1367, 1403, 1729
MflI RGATCY 2 cut(s) 2474, 2659
MhlI GDGCHC 4 cut(s) 1423, 1718, 2322, 2438
MlsI TGGCCA 1 cut(s) 593
MluI ACGCGT 1 cut(s) 1397
MluNI TGGCCA 1 cut(s) 593
MlyI GAGTC 9 cut(s) 182, 239, 248, 251, 317, 381, 1400, 1868, 2251
MmeI TCCRAC 2 cut(s) 423, 2154
Mox20I TGGCCA 1 cut(s) 593
MroXI GAANNNNTTC 4 cut(s) 1177, 1188, 1485, 2652
MscI TGGCCA 1 cut(s) 593
MseI TTAA 8 cut(s) 161, 1133, 1326, 1584, 2450, 2505, 2619, 2664
MslI CAYNNNNRTG 4 cut(s) 395, 599, 1133, 2294
Msp20I TGGCCA 1 cut(s) 593
MspA1I CMGCKG 6 cut(s) 36, 60, 917, 929, 1658, 2091
MspI CCGG 3 cut(s) 17, 77, 709
MspR9I CCNGG 7 cut(s) 77, 1062, 1244, 1470, 1705, 1763, 2471
Mva1269I GAATGC 2 cut(s) 332, 1188
MvaI CCWGG 6 cut(s) 1062, 1244, 1470, 1705, 1763, 2471
MvnI CGCG 5 cut(s) 36, 219, 511, 1194, 1399
MwoI GCNNNNNNNGC 8 cut(s) 269, 401, 517, 923, 1814, 1910, 1925, 1952
NciI CCSGG 1 cut(s) 77
NdeI CATATG 1 cut(s) 2022
NlaIII CATG 8 cut(s) 119, 598, 663, 897, 1283, 2001, 2120, 2647
NlaIV GGNNCC 2 cut(s) 1066, 1308
NmeAIII GCCGAG 2 cut(s) 239, 262
NmuCI GTSAC 4 cut(s) 12, 828, 1367, 1403
NspV TTCGAA 2 cut(s) 1028, 2362
OliI CACNNNNGTG 1 cut(s) 2294
PaeR7I CTCGAG 1 cut(s) 1788
PceI AGGCCT 2 cut(s) 365, 1121
PcsI WCGNNNNNNNCGW 1 cut(s) 216
PctI GAATGC 2 cut(s) 332, 1188
PdmI GAANNNNTTC 4 cut(s) 1177, 1188, 1485, 2652
PfeI GAWTC 9 cut(s) 760, 890, 911, 963, 1381, 1486, 2045, 2699, 2705
PflMI CCANNNNNTGG 1 cut(s) 1710
PfoI TCCNGGA 1 cut(s) 1468
PinAI ACCGGT 1 cut(s) 708
PleI GAGTC 9 cut(s) 181, 239, 247, 251, 316, 380, 1399, 1867, 2251
PpsI GAGTC 9 cut(s) 181, 239, 247, 251, 316, 380, 1399, 1867, 2251
Ppu21I YACGTR 2 cut(s) 639, 812
PshBI ATTAAT 2 cut(s) 1133, 1326
Psp6I CCWGG 6 cut(s) 1060, 1242, 1468, 1703, 1761, 2469
PspFI CCCAGC 1 cut(s) 530
PspGI CCWGG 6 cut(s) 1060, 1242, 1468, 1703, 1761, 2469
PspN4I GGNNCC 2 cut(s) 1066, 1308
PspPI GGNCC 3 cut(s) 178, 298, 437
PspXI VCTCGAGB 1 cut(s) 1788
PstNI CAGNNNCTG 2 cut(s) 929, 1658
PsuI RGATCY 2 cut(s) 2474, 2659
PvuII CAGCTG 4 cut(s) 917, 929, 1658, 2091
RsaI GTAC 8 cut(s) 41, 284, 637, 970, 975, 1005, 1201, 1273
RsaNI GTAC 8 cut(s) 40, 283, 636, 969, 974, 1004, 1200, 1272
RseI CAYNNNNRTG 4 cut(s) 395, 599, 1133, 2294
SacII CCGCGG 1 cut(s) 37
SaqAI TTAA 8 cut(s) 161, 1133, 1326, 1584, 2450, 2505, 2619, 2664
Sau96I GGNCC 3 cut(s) 178, 298, 437
SchI GAGTC 9 cut(s) 182, 239, 248, 251, 317, 381, 1400, 1868, 2251
ScrFI CCNGG 7 cut(s) 77, 1062, 1244, 1470, 1705, 1763, 2471
SduI GDGCHC 4 cut(s) 1423, 1718, 2322, 2438
SfaNI GCATC 7 cut(s) 576, 1108, 1732, 1942, 2191, 2570, 2589
SfcI CTRYAG 3 cut(s) 367, 2110, 2348
Sfr274I CTCGAG 1 cut(s) 1788
Sfr303I CCGCGG 1 cut(s) 37
SfuI TTCGAA 2 cut(s) 1028, 2362
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 2 cut(s) 298, 437
SlaI CTCGAG 1 cut(s) 1788
SmiMI CAYNNNNRTG 4 cut(s) 395, 599, 1133, 2294
SmlI CTYRAG 1 cut(s) 1788
SmoI CTYRAG 1 cut(s) 1788
SnaBI TACGTA 2 cut(s) 639, 812
SseBI AGGCCT 2 cut(s) 365, 1121
SspI AATATT 2 cut(s) 562, 2008
SspMI CTAG 3 cut(s) 1083, 1929, 2153
StuI AGGCCT 2 cut(s) 365, 1121
StyD4I CCNGG 7 cut(s) 75, 1060, 1242, 1468, 1703, 1761, 2469
StyI CCWWGG 3 cut(s) 321, 2335, 2526
TaaI ACNGT 6 cut(s) 108, 441, 973, 1034, 2100, 2285
TaiI ACGT 5 cut(s) 14, 213, 641, 814, 1420
TaqI TCGA 6 cut(s) 171, 1028, 1789, 2235, 2362, 2697
TaqII GACCGA 1 cut(s) 315
TatI WGTACW 2 cut(s) 282, 973
TfiI GAWTC 9 cut(s) 760, 890, 911, 963, 1381, 1486, 2045, 2699, 2705
Tru1I TTAA 8 cut(s) 161, 1133, 1326, 1584, 2450, 2505, 2619, 2664
Tru9I TTAA 8 cut(s) 161, 1133, 1326, 1584, 2450, 2505, 2619, 2664
TscAI CASTG 5 cut(s) 477, 1242, 1428, 1819, 2296
TseFI GTSAC 4 cut(s) 12, 828, 1367, 1403
Tsp45I GTSAC 4 cut(s) 12, 828, 1367, 1403
TspGWI ACGGA 2 cut(s) 956, 2285
TspRI CASTG 5 cut(s) 477, 1242, 1428, 1819, 2296
Van91I CCANNNNNTGG 1 cut(s) 1710
VneI GTGCAC 1 cut(s) 1419
VpaK11BI GGWCC 2 cut(s) 298, 437
VspI ATTAAT 2 cut(s) 1133, 1326
XagI CCTNNNNNAGG 2 cut(s) 1467, 1532
XapI RAATTY 5 cut(s) 1173, 1509, 1876, 2075, 2553
XbaI TCTAGA 1 cut(s) 2152
XhoI CTCGAG 1 cut(s) 1788
XmnI GAANNNNTTC 4 cut(s) 1177, 1188, 1485, 2652
XspI CTAG 3 cut(s) 1083, 1929, 2153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.