Rh1AG043000

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000877
Physical Location & Seq
Reverse (-)
7434272 .. 7443779
9508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG043000.1

Sequence Viewer

Length: 2739 bp
ATGTCTGAACCGTCGCCGGACCTCGCTTTCCTCCGCGCGTACGAGCTCCGTCTCCTCCGCTGCACCTTCCTCTCTCCTTCTCCGCCGTCCGATCCTGAACAACCGTCCGATCAAACCTCGCCCACTCACCCCCTCTCCCCTCTAATCTCCTCCCTCCTCACTTCCATCGAGTCCGGCCGATACCTCGAAGCCCTCACCTCCGCCGACGCAAACCGGCTCGTCTTCAAACTCACCGATTCCCACTCGCTCGGCGACCACGACGCCGATCGAGTCTACTCCGAGTTCCTCCGCCGCGTGGAGTCGTTCATATGCGAAGAAGCTGATGATAATGGGAAGGACCAGGCCTATAGAGTCGTCGTCGTACTCTGCATTGCCGTAGCTGCCTTACTTGCTTTCACTCAGTCTAACCTAACCGGACCTTTGGAGGGGCTGCCAAGGTGTCCGTTGCCAATGGAAGTGCCCTTATTTGATGAATGGGACAATTGGGCGCGGAATCAGCTTATGGCTGCTGGCTCTGACTTGCTTGGAAAGGTCTATAATATTCAGTATATAATTTATGCAAAGATATTGGTCATGAAGATGAAAGATTTGTTATTTGAAGGAAGTTTGTCTTGTGCATATGGAATTAGGAGCCTTTCATGGTGGCTCGCTAGGGTCACCTTTCTCCATCAGCACATTCTCGATGAGCGGTCTTCATCTCTGTTCGACCTTTCGCATGTCTTTACAAGTGAAACTTTGAATCATTTTGGCACGTTGGAGAAAGTAACAAGTTATTGGGGTAATGATTTGCGTAATGGCGAGGGATCAACACTTGTCTCAGTGATTCATCTGGAAGCTGGAATGATGGAATACATCTATGCACGTGTTGATTCATGCAGGTTGCATTTTGAATCAGCTGAAGCAGCAGCTGGTGTTAAGCTTTCAGTTACAGGGGTTCTTGGCTTCCGTACTATACATCAGGTTGAACCAAAGGCACAAATGGTACTTTTAACAAACACAACTTCATCAAAGAGTGGGGCTCTCTGTTCCTCTGAAAGCCCTGGCCCTCATAGATACGATTCTATTGGCAGAAATGATATATCTAAGCATCCATCTGAGTCCCATGAGGCTTCTGATATATTATTGACTCCAAGATTGGTAGAGAATGAGAGCGGTTCTGGAGTTATATCAGACGGCATTCAAGTTGGTGGTACTGCTGCTGACCCTTTGAGTGCAATCCAGCAGGCAGTGATCCTGGCTAAATGCCTTCTAATTGAGAAGAGCACACGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACAACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGAGACGTAGTCACACAAAGGAACGTGCATTGACGATGATGGAAACATTGGTTCAGGGCATCAATGATCCCTCTCCAGGAGTGGCAGACAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTAATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCATTGGGTGACGTTACTAATGATGATGCCTGCTTTGAAAAAGCCCTAGAAGTTTCAAACAATAGGTCGGCTCGGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGAGGGGAATATAGAACATCAAAACTTCTGTGGGAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATAGGGATATTGAGAAGGCACTAGATGGCTTTACACGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCCTGTTTGCATATGATAAAAGGGAAGAGTAAAGAAGCTTTCATTGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGCTATCAACTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTGCACGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGCTGAGTTATTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTAATTCATCAATGACTGATGATGAAGATAACTTTCTCGTTTGTGGGACCACAAATGCAGCATCTGAGGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTCCTTGGAAAAGTTCTACAACAGATAGTTCGGAGTGGAAATGGAACAGATATTTGGGGCTTGTATGCTAGATGGCAAAAAATGAAAGGAGACCTCTCAATGTGCAGAGAAGCTTGGTTAAAGCAAGTCAGATCATACCAGGGATCTGATTTGTGGAAAGATAGAGATCGGTTTAAAAAGTTTGCGAAATCATCCTTGGAACTCTGCAAGGTGTATATGGAGATTTCTTCATCTACTGGCAGCCGTGATGAACTTCTCTCAGCTGAAAGGCACCTAAGGAACATAATGAAACAGGCGGGGAGTTTCGCAGACATGGAAGAACTTCAACATCTTAAAGCCTGCCTTGATGAAGTGAAGTTAAAACTTGATTGTGATAGTGTGTCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

912

Amino Acids

102.15

Weight (kDa)

5.45

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 867
AccB1I GGYRCC 1 cut(s) 2619
AccB7I CCANNNNNTGG 1 cut(s) 1701
AccBSI CCGCTC 2 cut(s) 688, 1152
AccI GTMKAC 2 cut(s) 273, 2732
AccII CGCG 4 cut(s) 36, 38, 294, 490
AclWI GGATC 7 cut(s) 86, 811, 1225, 1445, 1964, 2175, 2500
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 2 cut(s) 1578, 1867
AcuI CTGAAG 2 cut(s) 918, 2084
AcvI CACGTG 1 cut(s) 863
AcyI GRCGYC 1 cut(s) 261
AdeI CACNNNGTG 1 cut(s) 1805
AfaI GTAC 5 cut(s) 41, 363, 949, 984, 1192
AfiI CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
AflIII ACRYGT 1 cut(s) 862
AjnI CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
AjuI GAANNNNNNNTTGG 4 cut(s) 2386, 2418, 2528, 2560
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
Alw21I GWGCWC 3 cut(s) 48, 1265, 2340
Alw26I GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
AlwI GGATC 7 cut(s) 86, 811, 1225, 1445, 1964, 2175, 2500
AlwNI CAGNNNCTG 3 cut(s) 908, 1649, 2309
Ama87I CYCGRG 2 cut(s) 1779, 2325
AoxI GGCC 4 cut(s) 175, 342, 1042, 1860
ApoI RAATTY 2 cut(s) 1578, 1867
ArsI GACNNNNNNTTYG 2 cut(s) 1757, 1789
Asp700I GAANNNNTTC 1 cut(s) 2670
AspA2I CCTAGG 1 cut(s) 1897
AspLEI GCGC 2 cut(s) 38, 490
AspS9I GGNCC 5 cut(s) 19, 337, 416, 1043, 2292
AsuHPI GGTGA 7 cut(s) 119, 187, 223, 649, 1547, 1727, 2232
AvaI CYCGRG 2 cut(s) 1779, 2325
AvaII GGWCC 4 cut(s) 19, 337, 416, 2292
AvrII CCTAGG 1 cut(s) 1897
AxyI CCTNAGG 1 cut(s) 2624
BaeGI GKGCMC 1 cut(s) 462
BanI GGYRCC 1 cut(s) 2619
BanII GRGCYC 2 cut(s) 48, 1021
BbrPI CACGTG 1 cut(s) 863
BbsI GAAGAC 2 cut(s) 214, 684
Bbv12I GWGCWC 3 cut(s) 48, 1265, 2340
BccI CCATC 9 cut(s) 173, 675, 838, 1099, 1281, 1417, 1877, 1937, 2415
BceAI ACGGC 5 cut(s) 70, 359, 1189, 1685, 2577
BciT130I CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BciVI GTATCC 1 cut(s) 1887
BclI TGATCA 1 cut(s) 1659
BcoDI GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
BfaI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
BfmI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
BfuAI ACCTGC 1 cut(s) 867
BfuI GTATCC 1 cut(s) 1887
BglI GCCNNNNNGGC 1 cut(s) 1901
BlnI CCTAGG 1 cut(s) 1897
BlpI GCTNAGC 2 cut(s) 1785, 2334
Bme1390I CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
Bme18I GGWCC 4 cut(s) 19, 337, 416, 2292
BmeT110I CYCGRG 2 cut(s) 1779, 2325
BmgT120I GGNCC 5 cut(s) 19, 337, 416, 1043, 2292
BmiI GGNNCC 4 cut(s) 632, 1299, 2293, 2621
BmrFI CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BmsI GCATC 6 cut(s) 1096, 1343, 1452, 1723, 2182, 2315
BpiI GAAGAC 2 cut(s) 214, 684
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
BpmI CTGGAG 2 cut(s) 1179, 1443
Bpu10I CCTNAGC 1 cut(s) 2136
Bpu1102I GCTNAGC 2 cut(s) 1785, 2334
BsaAI YACGTR 2 cut(s) 863, 1370
BsaBI GATNNNNATC 2 cut(s) 1499, 2514
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 2 cut(s) 1797, 2433
BsaJI CCNNGG 7 cut(s) 434, 1039, 1694, 1897, 2353, 2488, 2544
BsaWI WCCGGW 1 cut(s) 413
BsaXI ACNNNNNCTCC 4 cut(s) 119, 149, 1557, 1587
Bsc4I CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
Bse118I RCCGGY 1 cut(s) 213
Bse1I ACTGG 1 cut(s) 2590
Bse21I CCTNAGG 1 cut(s) 2624
Bse3DI GCAATG 4 cut(s) 369, 1863, 2043, 2134
Bse8I GATNNNNATC 2 cut(s) 1499, 2514
BseBI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BseDI CCNNGG 7 cut(s) 434, 1039, 1694, 1897, 2353, 2488, 2544
BseGI GGATG 2 cut(s) 1087, 2540
BseJI GATNNNNATC 2 cut(s) 1499, 2514
BseLI CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
BseMI GCAATG 4 cut(s) 369, 1863, 2043, 2134
BseMII CTCAG 9 cut(s) 413, 831, 1086, 1337, 2150, 2187, 2301, 2325, 2622
BseNI ACTGG 1 cut(s) 2590
BseRI GAGGAG 3 cut(s) 44, 139, 146
BseSI GKGCMC 1 cut(s) 462
BseX3I CGGCCG 1 cut(s) 175
BsgI GTGCAG 3 cut(s) 46, 2136, 2473
Bsh1236I CGCG 4 cut(s) 36, 38, 294, 490
Bsh1285I CGRYCG 2 cut(s) 178, 268
BshFI GGCC 4 cut(s) 177, 344, 1044, 1862
BshNI GGYRCC 1 cut(s) 2619
BsiEI CGRYCG 2 cut(s) 178, 268
BsiHKAI GWGCWC 3 cut(s) 48, 1265, 2340
BsiHKCI CYCGRG 2 cut(s) 1779, 2325
BsiSI CCGG 4 cut(s) 17, 174, 214, 414
BsiWI CGTACG 1 cut(s) 39
BslFI GGGAC 3 cut(s) 491, 1084, 2305
BslI CCNNNNNNNGG 5 cut(s) 295, 425, 1460, 1701, 1979
BsmAI GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
BsmBI CGTCTC 2 cut(s) 56, 1381
BsmFI GGGAC 3 cut(s) 491, 1084, 2305
BsmI GAATGC 1 cut(s) 1176
BsnI GGCC 4 cut(s) 177, 344, 1044, 1862
Bso31I GGTCTC 2 cut(s) 1797, 2433
BsoBI CYCGRG 2 cut(s) 1779, 2325
Bsp1286I GDGCHC 5 cut(s) 48, 462, 1021, 1265, 2340
Bsp1720I GCTNAGC 2 cut(s) 1785, 2334
BspANI GGCC 4 cut(s) 177, 344, 1044, 1862
BspCNI CTCAG 9 cut(s) 412, 830, 1087, 1336, 2149, 2188, 2302, 2326, 2621
BspFNI CGCG 4 cut(s) 36, 38, 294, 490
BspHI TCATGA 1 cut(s) 573
BspLI GGNNCC 4 cut(s) 632, 1299, 2293, 2621
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 7 cut(s) 86, 811, 1225, 1445, 1964, 2175, 2500
BspQI GCTCTTC 1 cut(s) 1253
BspT107I GGYRCC 1 cut(s) 2619
BspTNI GGTCTC 2 cut(s) 1797, 2433
BsrBI CCGCTC 2 cut(s) 688, 1152
BsrDI GCAATG 4 cut(s) 369, 1863, 2043, 2134
BsrFI RCCGGY 1 cut(s) 213
BsrI ACTGG 1 cut(s) 2590
BssAI RCCGGY 1 cut(s) 213
BssECI CCNNGG 7 cut(s) 434, 1039, 1694, 1897, 2353, 2488, 2544
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Bst2UI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
Bst4CI ACNGT 5 cut(s) 12, 105, 1510, 1535, 2091
Bst6I CTCTTC 2 cut(s) 1253, 2021
BstACI GRCGYC 1 cut(s) 261
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstBAI YACGTR 2 cut(s) 863, 1370
BstC8I GCNNGC 6 cut(s) 511, 648, 1224, 1738, 1801, 2689
BstEII GGTNACC 1 cut(s) 655
BstF5I GGATG 2 cut(s) 1087, 2540
BstFNI CGCG 4 cut(s) 36, 38, 294, 490
BstHHI GCGC 2 cut(s) 38, 490
BstMAI GTCTC 5 cut(s) 56, 820, 1381, 1797, 2433
BstMCI CGRYCG 2 cut(s) 178, 268
BstMWI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
BstNI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
BstNSI RCATGY 2 cut(s) 719, 1282
BstPI GGTNACC 1 cut(s) 655
BstSCI CCNGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
BstSFI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
BstSLI GKGCMC 1 cut(s) 462
BstSNI TACGTA 1 cut(s) 1370
BstUI CGCG 4 cut(s) 36, 38, 294, 490
BstV2I GAAGAC 2 cut(s) 214, 684
BstX2I RGATCY 2 cut(s) 2167, 2492
BstYI RGATCY 2 cut(s) 2167, 2492
BstZI CGGCCG 1 cut(s) 175
Bsu36I CCTNAGG 1 cut(s) 2624
BsuI GTATCC 1 cut(s) 1887
BsuRI GGCC 4 cut(s) 177, 344, 1044, 1862
BtsCI GGATG 2 cut(s) 1087, 2540
BtsI GCAGTG 2 cut(s) 1233, 1810
BtsIMutI CAGTG 4 cut(s) 825, 1233, 1810, 2060
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 6 cut(s) 511, 648, 1224, 1738, 1801, 2689
CaiI CAGNNNCTG 3 cut(s) 908, 1649, 2309
CciI TCATGA 1 cut(s) 573
CfoI GCGC 2 cut(s) 38, 490
Cfr10I RCCGGY 1 cut(s) 213
Cfr13I GGNCC 5 cut(s) 19, 337, 416, 1043, 2292
CseI GACGC 2 cut(s) 215, 269
Csp6I GTAC 5 cut(s) 40, 362, 948, 983, 1191
CviQI GTAC 5 cut(s) 40, 362, 948, 983, 1191
DraI TTTAAA 1 cut(s) 2524
DraIII CACNNNGTG 1 cut(s) 1805
EaeI YGGCCR 1 cut(s) 175
EagI CGGCCG 1 cut(s) 175
Eam1104I CTCTTC 2 cut(s) 1253, 2021
EarI CTCTTC 2 cut(s) 1253, 2021
EciI GGCGGA 3 cut(s) 72, 190, 278
Ecl136II GAGCTC 1 cut(s) 46
EclXI CGGCCG 1 cut(s) 175
Eco105I TACGTA 1 cut(s) 1370
Eco130I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Eco147I AGGCCT 1 cut(s) 344
Eco24I GRGCYC 2 cut(s) 48, 1021
Eco31I GGTCTC 2 cut(s) 1797, 2433
Eco47I GGWCC 4 cut(s) 19, 337, 416, 2292
Eco52I CGGCCG 1 cut(s) 175
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 2 cut(s) 918, 2084
Eco72I CACGTG 1 cut(s) 863
Eco81I CCTNAGG 1 cut(s) 2624
Eco88I CYCGRG 2 cut(s) 1779, 2325
Eco91I GGTNACC 1 cut(s) 655
EcoICRI GAGCTC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 655
EcoRI GAATTC 1 cut(s) 1867
EcoRII CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
EcoT14I CCWWGG 4 cut(s) 434, 1897, 2353, 2544
EcoT38I GRGCYC 2 cut(s) 48, 1021
ErhI CCWWGG 4 cut(s) 434, 1897, 2353, 2544
Esp3I CGTCTC 2 cut(s) 56, 1381
FalI AAGNNNNNCTT 8 cut(s) 595, 627, 718, 750, 2221, 2253, 2676, 2708
FaqI GGGAC 3 cut(s) 491, 1084, 2305
FauI CCCGC 1 cut(s) 2638
FauNDI CATATG 3 cut(s) 308, 619, 2013
FbaI TGATCA 1 cut(s) 1659
FblI GTMKAC 2 cut(s) 273, 2732
FokI GGATG 2 cut(s) 1074, 2527
FriOI GRGCYC 2 cut(s) 48, 1021
FspBI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
GlaI GCGC 2 cut(s) 37, 489
GsuI CTGGAG 2 cut(s) 1179, 1443
HaeIII GGCC 4 cut(s) 177, 344, 1044, 1862
HapII CCGG 4 cut(s) 17, 174, 214, 414
HgaI GACGC 2 cut(s) 215, 269
HhaI GCGC 2 cut(s) 38, 490
Hin1I GRCGYC 1 cut(s) 261
Hin6I GCGC 2 cut(s) 36, 488
HinP1I GCGC 2 cut(s) 36, 488
HindIII AAGCTT 3 cut(s) 917, 2037, 2460
HpaII CCGG 4 cut(s) 17, 174, 214, 414
HphI GGTGA 7 cut(s) 119, 187, 223, 649, 1547, 1727, 2232
Hpy166II GTNNAC 3 cut(s) 274, 1538, 2733
Hpy8I GTNNAC 3 cut(s) 274, 1538, 2733
Hpy99I CGWCG 5 cut(s) 16, 209, 263, 359, 362
HpyAV CCTTC 8 cut(s) 76, 87, 328, 593, 1256, 1519, 1927, 2152
HpyCH4III ACNGT 5 cut(s) 12, 105, 1510, 1535, 2091
HpyCH4IV ACGT 6 cut(s) 752, 862, 1369, 1390, 1408, 1719
HpyF10VI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
HpySE526I ACGT 6 cut(s) 752, 862, 1369, 1390, 1408, 1719
Hsp92I GRCGYC 1 cut(s) 261
HspAI GCGC 2 cut(s) 36, 488
Ksp22I TGATCA 1 cut(s) 1659
LguI GCTCTTC 1 cut(s) 1253
LmnI GCTCC 3 cut(s) 51, 630, 1303
LweI GCATC 6 cut(s) 1096, 1343, 1452, 1723, 2182, 2315
MaeI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
MaeII ACGT 6 cut(s) 752, 862, 1369, 1390, 1408, 1719
MaeIII GTNAC 6 cut(s) 655, 763, 925, 1394, 1715, 1720
MbiI CCGCTC 2 cut(s) 688, 1152
MboII GAAGA 9 cut(s) 214, 326, 589, 684, 1270, 2038, 2282, 2568, 2678
MfeI CAATTG 2 cut(s) 481, 1314
MflI RGATCY 2 cut(s) 2167, 2492
MhlI GDGCHC 5 cut(s) 48, 462, 1021, 1265, 2340
MlyI GAGTC 8 cut(s) 179, 279, 308, 360, 1106, 1120, 1391, 1859
MmeI TCCRAC 2 cut(s) 735, 2145
MroXI GAANNNNTTC 1 cut(s) 2670
MseI TTAA 8 cut(s) 915, 989, 1913, 2468, 2523, 2682, 2708, 2737
MslI CAYNNNNRTG 1 cut(s) 578
MspA1I CMGCKG 6 cut(s) 60, 896, 908, 1551, 1649, 2612
MspI CCGG 4 cut(s) 17, 174, 214, 414
MspR9I CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
MunI CAATTG 2 cut(s) 481, 1314
Mva1269I GAATGC 1 cut(s) 1176
MvaI CCWGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
MvnI CGCG 4 cut(s) 36, 38, 294, 490
MwoI GCNNNNNNNGC 8 cut(s) 380, 389, 496, 902, 1805, 1901, 2045, 2147
NdeI CATATG 3 cut(s) 308, 619, 2013
NlaIV GGNNCC 4 cut(s) 632, 1299, 2293, 2621
NmeAIII GCCGAG 1 cut(s) 228
NmuCI GTSAC 3 cut(s) 655, 1394, 1715
NspI RCATGY 2 cut(s) 719, 1282
PagI TCATGA 1 cut(s) 573
PceI AGGCCT 1 cut(s) 344
PciSI GCTCTTC 1 cut(s) 1253
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1176
PdmI GAANNNNTTC 1 cut(s) 2670
PfeI GAWTC 9 cut(s) 236, 493, 739, 823, 869, 890, 1058, 1319, 1477
Pfl23II CGTACG 1 cut(s) 39
PflFI GACNNNGTC 1 cut(s) 1392
PflMI CCANNNNNTGG 1 cut(s) 1701
PfoI TCCNGGA 1 cut(s) 1459
Ple19I CGATCG 1 cut(s) 268
PleI GAGTC 8 cut(s) 178, 278, 307, 359, 1105, 1120, 1390, 1858
PmaCI CACGTG 1 cut(s) 863
PmlI CACGTG 1 cut(s) 863
PpsI GAGTC 8 cut(s) 178, 278, 307, 359, 1105, 1120, 1390, 1858
Ppu21I YACGTR 2 cut(s) 863, 1370
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
PspCI CACGTG 1 cut(s) 863
PspEI GGTNACC 1 cut(s) 655
PspGI CCWGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
PspLI CGTACG 1 cut(s) 39
PspN4I GGNNCC 4 cut(s) 632, 1299, 2293, 2621
PspPI GGNCC 5 cut(s) 19, 337, 416, 1043, 2292
PstNI CAGNNNCTG 3 cut(s) 908, 1649, 2309
PsuI RGATCY 2 cut(s) 2167, 2492
PsyI GACNNNGTC 1 cut(s) 1392
PvuI CGATCG 1 cut(s) 268
PvuII CAGCTG 4 cut(s) 896, 908, 1649, 2612
RsaI GTAC 5 cut(s) 41, 363, 949, 984, 1192
RsaNI GTAC 5 cut(s) 40, 362, 948, 983, 1191
RseI CAYNNNNRTG 1 cut(s) 578
SacI GAGCTC 1 cut(s) 48
SapI GCTCTTC 1 cut(s) 1253
SaqAI TTAA 8 cut(s) 915, 989, 1913, 2468, 2523, 2682, 2708, 2737
Sau96I GGNCC 5 cut(s) 19, 337, 416, 1043, 2292
SchI GAGTC 8 cut(s) 179, 279, 308, 360, 1106, 1120, 1391, 1859
ScrFI CCNGG 6 cut(s) 341, 1041, 1235, 1461, 1696, 2489
SduI GDGCHC 5 cut(s) 48, 462, 1021, 1265, 2340
SfaNI GCATC 6 cut(s) 1096, 1343, 1452, 1723, 2182, 2315
SfcI CTRYAG 4 cut(s) 346, 1506, 1621, 2101
SinI GGWCC 4 cut(s) 19, 337, 416, 2292
SmiMI CAYNNNNRTG 1 cut(s) 578
SnaBI TACGTA 1 cut(s) 1370
SseBI AGGCCT 1 cut(s) 344
SspI AATATT 3 cut(s) 541, 1614, 1999
SspMI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
SstI GAGCTC 1 cut(s) 48
StuI AGGCCT 1 cut(s) 344
StyD4I CCNGG 6 cut(s) 339, 1039, 1233, 1459, 1694, 2487
StyI CCWWGG 4 cut(s) 434, 1897, 2353, 2544
TaaI ACNGT 5 cut(s) 12, 105, 1510, 1535, 2091
TaiI ACGT 6 cut(s) 755, 865, 1372, 1393, 1411, 1722
TaqI TCGA 7 cut(s) 168, 186, 268, 681, 705, 1308, 1385
TauI GCSGC 1 cut(s) 294
TfiI GAWTC 9 cut(s) 236, 493, 739, 823, 869, 890, 1058, 1319, 1477
Tru1I TTAA 8 cut(s) 915, 989, 1913, 2468, 2523, 2682, 2708, 2737
Tru9I TTAA 8 cut(s) 915, 989, 1913, 2468, 2523, 2682, 2708, 2737
TscAI CASTG 4 cut(s) 825, 1233, 1810, 2067
TseFI GTSAC 3 cut(s) 655, 1394, 1715
Tsp45I GTSAC 3 cut(s) 655, 1394, 1715
TspGWI ACGGA 4 cut(s) 38, 432, 935, 2170
TspRI CASTG 4 cut(s) 825, 1233, 1810, 2067
Tth111I GACNNNGTC 1 cut(s) 1392
Van91I CCANNNNNTGG 1 cut(s) 1701
VpaK11BI GGWCC 4 cut(s) 19, 337, 416, 2292
XapI RAATTY 2 cut(s) 1578, 1867
XbaI TCTAGA 1 cut(s) 2143
XceI RCATGY 2 cut(s) 719, 1282
XmaJI CCTAGG 1 cut(s) 1897
XmiI GTMKAC 2 cut(s) 273, 2732
XmnI GAANNNNTTC 1 cut(s) 2670
XspI CTAG 6 cut(s) 651, 1754, 1898, 1940, 2144, 2418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.