Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PolyA_pol | PF01743 | 88 - 226 | 1.5e-31 | Poly A polymerase head domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1205 |
| Acc16I | TGCGCA | 1 cut(s) | 467 |
| AccB1I | GGYRCC | 1 cut(s) | 148 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 898, 1222 |
| AccI | GTMKAC | 2 cut(s) | 360, 1043 |
| AccII | CGCG | 3 cut(s) | 267, 288, 458 |
| AclI | AACGTT | 1 cut(s) | 1699 |
| AclWI | GGATC | 1 cut(s) | 710 |
| AcoI | YGGCCR | 1 cut(s) | 1036 |
| AcsI | RAATTY | 1 cut(s) | 353 |
| AcuI | CTGAAG | 5 cut(s) | 9, 922, 1302, 1512, 1632 |
| AfaI | GTAC | 5 cut(s) | 168, 1212, 1314, 1338, 1429 |
| AfeI | AGCGCT | 1 cut(s) | 114 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 898, 1222 |
| AflII | CTTAAG | 2 cut(s) | 499, 1172 |
| AflIII | ACRYGT | 1 cut(s) | 339 |
| AgsI | TTSAA | 8 cut(s) | 16, 371, 632, 656, 919, 1028, 1326, 1457 |
| AjiI | CACGTC | 1 cut(s) | 388 |
| Alw26I | GTCTC | 2 cut(s) | 159, 1158 |
| AlwI | GGATC | 1 cut(s) | 710 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1655 |
| Ama87I | CYCGRG | 2 cut(s) | 227, 1332 |
| Aor51HI | AGCGCT | 1 cut(s) | 114 |
| AoxI | GGCC | 4 cut(s) | 247, 699, 900, 1036 |
| ApoI | RAATTY | 1 cut(s) | 353 |
| AseI | ATTAAT | 1 cut(s) | 1031 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1437 |
| AspA2I | CCTAGG | 1 cut(s) | 103 |
| AspLEI | GCGC | 2 cut(s) | 115, 468 |
| AspS9I | GGNCC | 2 cut(s) | 283, 1592 |
| AsuC2I | CCSGG | 2 cut(s) | 1333, 1334 |
| AsuHPI | GGTGA | 1 cut(s) | 1159 |
| AsuII | TTCGAA | 1 cut(s) | 1694 |
| AvaI | CYCGRG | 2 cut(s) | 227, 1332 |
| AvaII | GGWCC | 2 cut(s) | 283, 1592 |
| AvrII | CCTAGG | 1 cut(s) | 103 |
| BalI | TGGCCA | 1 cut(s) | 1038 |
| BanI | GGYRCC | 1 cut(s) | 148 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1485, 1517 |
| BbsI | GAAGAC | 2 cut(s) | 928, 935 |
| BccI | CCATC | 2 cut(s) | 273, 1387 |
| BceAI | ACGGC | 1 cut(s) | 136 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 551, 585 |
| BclI | TGATCA | 1 cut(s) | 433 |
| BcnI | CCSGG | 2 cut(s) | 1333, 1334 |
| BcoDI | GTCTC | 2 cut(s) | 159, 1158 |
| BfaI | CTAG | 4 cut(s) | 8, 104, 116, 1511 |
| BfmI | CTRYAG | 3 cut(s) | 251, 963, 1656 |
| BfoI | RGCGCY | 1 cut(s) | 116 |
| BfrI | CTTAAG | 2 cut(s) | 499, 1172 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 246 |
| BglII | AGATCT | 2 cut(s) | 658, 1435 |
| BlnI | CCTAGG | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 2 cut(s) | 1333, 1334 |
| Bme18I | GGWCC | 2 cut(s) | 283, 1592 |
| BmeT110I | CYCGRG | 2 cut(s) | 227, 1332 |
| BmgBI | CACGTC | 1 cut(s) | 388 |
| BmgT120I | GGNCC | 2 cut(s) | 283, 1592 |
| BmiI | GGNNCC | 3 cut(s) | 150, 284, 1019 |
| BmrFI | CCNGG | 2 cut(s) | 1333, 1334 |
| BmsI | GCATC | 7 cut(s) | 453, 559, 1180, 1258, 1265, 1486, 1522 |
| BpiI | GAAGAC | 2 cut(s) | 928, 935 |
| BpmI | CTGGAG | 1 cut(s) | 1608 |
| Bpu10I | CCTNAGC | 1 cut(s) | 402 |
| Bpu14I | TTCGAA | 1 cut(s) | 1694 |
| BpuEI | CTTGAG | 1 cut(s) | 1691 |
| BpuMI | CCSGG | 2 cut(s) | 1333, 1334 |
| BsaJI | CCNNGG | 3 cut(s) | 103, 1331, 1332 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 898, 1222 |
| Bse118I | RCCGGY | 1 cut(s) | 219 |
| Bse1I | ACTGG | 3 cut(s) | 1039, 1185, 1464 |
| BseDI | CCNNGG | 3 cut(s) | 103, 1331, 1332 |
| BseGI | GGATG | 8 cut(s) | 183, 284, 468, 574, 718, 983, 1537, 1683 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 898, 1222 |
| BseMII | CTCAG | 1 cut(s) | 416 |
| BseNI | ACTGG | 3 cut(s) | 1039, 1185, 1464 |
| BsgI | GTGCAG | 1 cut(s) | 368 |
| Bsh1236I | CGCG | 3 cut(s) | 267, 288, 458 |
| BshFI | GGCC | 4 cut(s) | 249, 701, 902, 1038 |
| BshNI | GGYRCC | 1 cut(s) | 148 |
| BsiHKCI | CYCGRG | 2 cut(s) | 227, 1332 |
| BsiSI | CCGG | 2 cut(s) | 220, 1333 |
| BslFI | GGGAC | 2 cut(s) | 191, 244 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 898, 1222 |
| BsmAI | GTCTC | 2 cut(s) | 159, 1158 |
| BsmBI | CGTCTC | 1 cut(s) | 159 |
| BsmFI | GGGAC | 2 cut(s) | 191, 244 |
| BsmI | GAATGC | 2 cut(s) | 531, 1670 |
| BsnI | GGCC | 4 cut(s) | 249, 701, 902, 1038 |
| BsoBI | CYCGRG | 2 cut(s) | 227, 1332 |
| Bsp119I | TTCGAA | 1 cut(s) | 1694 |
| Bsp1407I | TGTACA | 1 cut(s) | 1210 |
| Bsp143I | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| BspANI | GGCC | 4 cut(s) | 249, 701, 902, 1038 |
| BspCNI | CTCAG | 1 cut(s) | 415 |
| BspFNI | CGCG | 3 cut(s) | 267, 288, 458 |
| BspHI | TCATGA | 1 cut(s) | 1563 |
| BspLI | GGNNCC | 3 cut(s) | 150, 284, 1019 |
| BspMAI | CTGCAG | 2 cut(s) | 967, 1660 |
| BspPI | GGATC | 1 cut(s) | 710 |
| BspQI | GCTCTTC | 1 cut(s) | 1465 |
| BspT104I | TTCGAA | 1 cut(s) | 1694 |
| BspT107I | GGYRCC | 1 cut(s) | 148 |
| BspTI | CTTAAG | 2 cut(s) | 499, 1172 |
| BsrFI | RCCGGY | 1 cut(s) | 219 |
| BsrGI | TGTACA | 1 cut(s) | 1210 |
| BsrI | ACTGG | 3 cut(s) | 1039, 1185, 1464 |
| BssAI | RCCGGY | 1 cut(s) | 219 |
| BssECI | CCNNGG | 3 cut(s) | 103, 1331, 1332 |
| BssMI | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| BssT1I | CCWWGG | 1 cut(s) | 103 |
| Bst4CI | ACNGT | 2 cut(s) | 541, 1201 |
| Bst6I | CTCTTC | 4 cut(s) | 390, 504, 558, 1465 |
| BstAFI | CTTAAG | 2 cut(s) | 499, 1172 |
| BstAUI | TGTACA | 1 cut(s) | 1210 |
| BstBI | TTCGAA | 1 cut(s) | 1694 |
| BstC8I | GCNNGC | 6 cut(s) | 111, 161, 274, 799, 963, 1638 |
| BstDEI | CTNAG | 3 cut(s) | 402, 1100, 1442 |
| BstF5I | GGATG | 8 cut(s) | 183, 284, 468, 574, 718, 983, 1537, 1683 |
| BstFNI | CGCG | 3 cut(s) | 267, 288, 458 |
| BstH2I | RGCGCY | 1 cut(s) | 116 |
| BstHHI | GCGC | 2 cut(s) | 115, 468 |
| BstKTI | GATC | 6 cut(s) | 436, 661, 718, 873, 1438, 1563 |
| BstMAI | GTCTC | 2 cut(s) | 159, 1158 |
| BstMBI | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 143, 232, 246, 273, 824, 1190, 1496, 1609 |
| BstNSI | RCATGY | 1 cut(s) | 343 |
| BstSCI | CCNGG | 2 cut(s) | 1331, 1332 |
| BstSFI | CTRYAG | 3 cut(s) | 251, 963, 1656 |
| BstUI | CGCG | 3 cut(s) | 267, 288, 458 |
| BstV2I | GAAGAC | 2 cut(s) | 928, 935 |
| BstX2I | RGATCY | 2 cut(s) | 658, 1435 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 448, 709 |
| BstYI | RGATCY | 2 cut(s) | 658, 1435 |
| BsuRI | GGCC | 4 cut(s) | 249, 701, 902, 1038 |
| BtgZI | GCGATG | 1 cut(s) | 816 |
| BtrI | CACGTC | 1 cut(s) | 388 |
| BtsCI | GGATG | 8 cut(s) | 183, 284, 468, 574, 718, 983, 1537, 1683 |
| BtsIMutI | CAGTG | 2 cut(s) | 852, 1192 |
| Cac8I | GCNNGC | 6 cut(s) | 111, 161, 274, 799, 963, 1638 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1655 |
| CciI | TCATGA | 1 cut(s) | 1563 |
| CfoI | GCGC | 2 cut(s) | 115, 468 |
| Cfr10I | RCCGGY | 1 cut(s) | 219 |
| Cfr13I | GGNCC | 2 cut(s) | 283, 1592 |
| Cfr9I | CCCGGG | 1 cut(s) | 1332 |
| CseI | GACGC | 1 cut(s) | 241 |
| Csp6I | GTAC | 5 cut(s) | 167, 1211, 1313, 1337, 1428 |
| CviAII | CATG | 9 cut(s) | 142, 340, 423, 480, 956, 1014, 1217, 1564, 1629 |
| CviQI | GTAC | 5 cut(s) | 167, 1211, 1313, 1337, 1428 |
| DdeI | CTNAG | 3 cut(s) | 402, 1100, 1442 |
| DpnI | GATC | 6 cut(s) | 435, 660, 717, 872, 1437, 1562 |
| DpnII | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| DraI | TTTAAA | 1 cut(s) | 1704 |
| EaeI | YGGCCR | 1 cut(s) | 1036 |
| Eam1104I | CTCTTC | 4 cut(s) | 390, 504, 558, 1465 |
| EarI | CTCTTC | 4 cut(s) | 390, 504, 558, 1465 |
| EciI | GGCGGA | 1 cut(s) | 291 |
| Eco130I | CCWWGG | 1 cut(s) | 103 |
| Eco47I | GGWCC | 2 cut(s) | 283, 1592 |
| Eco47III | AGCGCT | 1 cut(s) | 114 |
| Eco57I | CTGAAG | 5 cut(s) | 9, 922, 1302, 1512, 1632 |
| Eco88I | CYCGRG | 2 cut(s) | 227, 1332 |
| EcoT14I | CCWWGG | 1 cut(s) | 103 |
| ErhI | CCWWGG | 1 cut(s) | 103 |
| Esp3I | CGTCTC | 1 cut(s) | 159 |
| FaeI | CATG | 9 cut(s) | 145, 343, 426, 483, 959, 1017, 1220, 1567, 1632 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 197, 229, 804, 836, 1653, 1685 |
| FaqI | GGGAC | 2 cut(s) | 191, 244 |
| FatI | CATG | 9 cut(s) | 141, 339, 422, 479, 955, 1013, 1216, 1563, 1628 |
| FauI | CCCGC | 3 cut(s) | 89, 100, 168 |
| FauNDI | CATATG | 1 cut(s) | 470 |
| FbaI | TGATCA | 1 cut(s) | 433 |
| FblI | GTMKAC | 2 cut(s) | 360, 1043 |
| FokI | GGATG | 8 cut(s) | 170, 291, 475, 581, 725, 990, 1544, 1690 |
| FspAI | RTGCGCAY | 1 cut(s) | 467 |
| FspBI | CTAG | 4 cut(s) | 8, 104, 116, 1511 |
| FspI | TGCGCA | 1 cut(s) | 467 |
| GlaI | GCGC | 2 cut(s) | 114, 467 |
| GsuI | CTGGAG | 1 cut(s) | 1608 |
| HaeII | RGCGCY | 1 cut(s) | 116 |
| HaeIII | GGCC | 4 cut(s) | 249, 701, 902, 1038 |
| HapII | CCGG | 2 cut(s) | 220, 1333 |
| HgaI | GACGC | 1 cut(s) | 241 |
| HhaI | GCGC | 2 cut(s) | 115, 468 |
| Hin1II | CATG | 9 cut(s) | 145, 343, 426, 483, 959, 1017, 1220, 1567, 1632 |
| Hin6I | GCGC | 2 cut(s) | 113, 466 |
| HinP1I | GCGC | 2 cut(s) | 113, 466 |
| HincII | GTYRAC | 1 cut(s) | 496 |
| HindII | GTYRAC | 1 cut(s) | 496 |
| HindIII | AAGCTT | 1 cut(s) | 293 |
| HinfI | GANTC | 8 cut(s) | 256, 408, 682, 762, 1138, 1166, 1243, 1301 |
| HpaII | CCGG | 2 cut(s) | 220, 1333 |
| HphI | GGTGA | 1 cut(s) | 1159 |
| Hpy166II | GTNNAC | 5 cut(s) | 361, 496, 1044, 1150, 1213 |
| Hpy188I | TCNGA | 5 cut(s) | 69, 663, 973, 1163, 1282 |
| Hpy188III | TCNNGA | 9 cut(s) | 76, 229, 371, 431, 876, 1517, 1564, 1587, 1650 |
| Hpy8I | GTNNAC | 5 cut(s) | 361, 496, 1044, 1150, 1213 |
| Hpy99I | CGWCG | 2 cut(s) | 69, 392 |
| HpyAV | CCTTC | 5 cut(s) | 968, 1059, 1549, 1656, 1675 |
| HpyCH4III | ACNGT | 2 cut(s) | 541, 1201 |
| HpyCH4IV | ACGT | 3 cut(s) | 71, 387, 1699 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 143, 232, 246, 273, 824, 1190, 1496, 1609 |
| HpyF3I | CTNAG | 3 cut(s) | 402, 1100, 1442 |
| HpySE526I | ACGT | 3 cut(s) | 71, 387, 1699 |
| Hsp92II | CATG | 9 cut(s) | 145, 343, 426, 483, 959, 1017, 1220, 1567, 1632 |
| HspAI | GCGC | 2 cut(s) | 113, 466 |
| Ksp22I | TGATCA | 1 cut(s) | 433 |
| Kzo9I | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| LguI | GCTCTTC | 1 cut(s) | 1465 |
| LmnI | GCTCC | 1 cut(s) | 66 |
| LweI | GCATC | 7 cut(s) | 453, 559, 1180, 1258, 1265, 1486, 1522 |
| MaeI | CTAG | 4 cut(s) | 8, 104, 116, 1511 |
| MaeII | ACGT | 3 cut(s) | 71, 387, 1699 |
| MaeIII | GTNAC | 2 cut(s) | 679, 980 |
| MalI | GATC | 6 cut(s) | 435, 660, 717, 872, 1437, 1562 |
| MboI | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| MfeI | CAATTG | 1 cut(s) | 627 |
| MflI | RGATCY | 2 cut(s) | 658, 1435 |
| MlsI | TGGCCA | 1 cut(s) | 1038 |
| MluNI | TGGCCA | 1 cut(s) | 1038 |
| MlyI | GAGTC | 2 cut(s) | 676, 1160 |
| MmeI | TCCRAC | 3 cut(s) | 47, 211, 1203 |
| Mox20I | TGGCCA | 1 cut(s) | 1038 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1437 |
| MscI | TGGCCA | 1 cut(s) | 1038 |
| MslI | CAYNNNNRTG | 2 cut(s) | 146, 707 |
| Msp20I | TGGCCA | 1 cut(s) | 1038 |
| MspA1I | CMGCKG | 2 cut(s) | 794, 1490 |
| MspCI | CTTAAG | 2 cut(s) | 499, 1172 |
| MspI | CCGG | 2 cut(s) | 220, 1333 |
| MspR9I | CCNGG | 2 cut(s) | 1333, 1334 |
| MunI | CAATTG | 1 cut(s) | 627 |
| Mva1269I | GAATGC | 2 cut(s) | 531, 1670 |
| MvnI | CGCG | 3 cut(s) | 267, 288, 458 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 143, 232, 246, 273, 824, 1190, 1496, 1609 |
| NciI | CCSGG | 2 cut(s) | 1333, 1334 |
| NdeI | CATATG | 1 cut(s) | 470 |
| NdeII | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| NlaIII | CATG | 9 cut(s) | 145, 343, 426, 483, 959, 1017, 1220, 1567, 1632 |
| NlaIV | GGNNCC | 3 cut(s) | 150, 284, 1019 |
| NmuCI | GTSAC | 2 cut(s) | 679, 980 |
| NsbI | TGCGCA | 1 cut(s) | 467 |
| NspI | RCATGY | 1 cut(s) | 343 |
| NspV | TTCGAA | 1 cut(s) | 1694 |
| PagI | TCATGA | 1 cut(s) | 1563 |
| PciI | ACATGT | 1 cut(s) | 339 |
| PciSI | GCTCTTC | 1 cut(s) | 1465 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 730, 739 |
| PctI | GAATGC | 2 cut(s) | 531, 1670 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1437 |
| PfeI | GAWTC | 6 cut(s) | 256, 408, 762, 1138, 1243, 1301 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 898, 1222 |
| PleI | GAGTC | 2 cut(s) | 676, 1160 |
| PpsI | GAGTC | 2 cut(s) | 676, 1160 |
| PscI | ACATGT | 1 cut(s) | 339 |
| PshBI | ATTAAT | 1 cut(s) | 1031 |
| PsiI | TTATAA | 1 cut(s) | 1205 |
| Psp1406I | AACGTT | 1 cut(s) | 1699 |
| PspN4I | GGNNCC | 3 cut(s) | 150, 284, 1019 |
| PspPI | GGNCC | 2 cut(s) | 283, 1592 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 351, 383 |
| PstI | CTGCAG | 2 cut(s) | 967, 1660 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1655 |
| PsuI | RGATCY | 2 cut(s) | 658, 1435 |
| PvuII | CAGCTG | 2 cut(s) | 794, 1490 |
| RsaI | GTAC | 5 cut(s) | 168, 1212, 1314, 1338, 1429 |
| RsaNI | GTAC | 5 cut(s) | 167, 1211, 1313, 1337, 1428 |
| RseI | CAYNNNNRTG | 2 cut(s) | 146, 707 |
| SapI | GCTCTTC | 1 cut(s) | 1465 |
| Sau3AI | GATC | 6 cut(s) | 433, 658, 715, 870, 1435, 1560 |
| Sau96I | GGNCC | 2 cut(s) | 283, 1592 |
| SchI | GAGTC | 2 cut(s) | 676, 1160 |
| ScrFI | CCNGG | 2 cut(s) | 1333, 1334 |
| SfaNI | GCATC | 7 cut(s) | 453, 559, 1180, 1258, 1265, 1486, 1522 |
| SfcI | CTRYAG | 3 cut(s) | 251, 963, 1656 |
| SfuI | TTCGAA | 1 cut(s) | 1694 |
| SinI | GGWCC | 2 cut(s) | 283, 1592 |
| SmaI | CCCGGG | 1 cut(s) | 1334 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 146, 707 |
| SmlI | CTYRAG | 3 cut(s) | 499, 1172, 1670 |
| SmoI | CTYRAG | 3 cut(s) | 499, 1172, 1670 |
| SspMI | CTAG | 4 cut(s) | 8, 104, 116, 1511 |
| StyD4I | CCNGG | 2 cut(s) | 1331, 1332 |
| StyI | CCWWGG | 1 cut(s) | 103 |
| TaaI | ACNGT | 2 cut(s) | 541, 1201 |
| TaiI | ACGT | 3 cut(s) | 74, 390, 1702 |
| TaqI | TCGA | 2 cut(s) | 733, 1694 |
| TatI | WGTACW | 1 cut(s) | 1210 |
| TauI | GCSGC | 1 cut(s) | 531 |
| TfiI | GAWTC | 6 cut(s) | 256, 408, 762, 1138, 1243, 1301 |
| TscAI | CASTG | 2 cut(s) | 859, 1192 |
| TseFI | GTSAC | 2 cut(s) | 679, 980 |
| Tsp45I | GTSAC | 2 cut(s) | 679, 980 |
| TspDTI | ATGAA | 8 cut(s) | 210, 754, 789, 819, 935, 1071, 1580, 1694 |
| TspGWI | ACGGA | 2 cut(s) | 53, 731 |
| TspMI | CCCGGG | 1 cut(s) | 1332 |
| TspRI | CASTG | 2 cut(s) | 859, 1192 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 898, 1222 |
| Vha464I | CTTAAG | 2 cut(s) | 499, 1172 |
| VpaK11BI | GGWCC | 2 cut(s) | 283, 1592 |
| VspI | ATTAAT | 1 cut(s) | 1031 |
| XapI | RAATTY | 1 cut(s) | 353 |
| XceI | RCATGY | 1 cut(s) | 343 |
| XmaI | CCCGGG | 1 cut(s) | 1332 |
| XmaJI | CCTAGG | 1 cut(s) | 103 |
| XmiI | GTMKAC | 2 cut(s) | 360, 1043 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1437 |
| XspI | CTAG | 4 cut(s) | 8, 104, 116, 1511 |