RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PCI | PF01399 | 76 - 146 | 5.8e-07 | PCI domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 274 |
| Acc16I | TGCGCA | 1 cut(s) | 492 |
| Acc36I | ACCTGC | 1 cut(s) | 274 |
| AccI | GTMKAC | 1 cut(s) | 411 |
| AciI | CCGC | 1 cut(s) | 677 |
| AclWI | GGATC | 2 cut(s) | 328, 659 |
| AcsI | RAATTY | 2 cut(s) | 182, 477 |
| AcuI | CTGAAG | 3 cut(s) | 77, 186, 240 |
| AfaI | GTAC | 4 cut(s) | 42, 265, 795, 818 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 421, 648 |
| AgsI | TTSAA | 6 cut(s) | 71, 254, 317, 507, 608, 724 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 17, 49 |
| Alw26I | GTCTC | 2 cut(s) | 237, 294 |
| AlwI | GGATC | 2 cut(s) | 328, 659 |
| Ama87I | CYCGRG | 1 cut(s) | 291 |
| ApeKI | GCWGC | 2 cut(s) | 530, 553 |
| ApoI | RAATTY | 2 cut(s) | 182, 477 |
| AspLEI | GCGC | 1 cut(s) | 493 |
| AspS9I | GGNCC | 1 cut(s) | 470 |
| AsuC2I | CCSGG | 1 cut(s) | 798 |
| AsuHPI | GGTGA | 1 cut(s) | 727 |
| AsuII | TTCGAA | 1 cut(s) | 578 |
| AvaI | CYCGRG | 1 cut(s) | 291 |
| AvaII | GGWCC | 1 cut(s) | 470 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 184, 216 |
| BbvCI | CCTCAGC | 1 cut(s) | 693 |
| BbvI | GCAGC | 2 cut(s) | 517, 565 |
| BccI | CCATC | 1 cut(s) | 92 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 272, 306 |
| BciVI | GTATCC | 1 cut(s) | 757 |
| BcnI | CCSGG | 1 cut(s) | 798 |
| BcoDI | GTCTC | 2 cut(s) | 237, 294 |
| BfaI | CTAG | 3 cut(s) | 45, 539, 624 |
| BfuAI | ACCTGC | 1 cut(s) | 274 |
| BfuI | GTATCC | 1 cut(s) | 757 |
| BisI | GCNGC | 2 cut(s) | 531, 554 |
| BlsI | GCNGC | 2 cut(s) | 532, 555 |
| Bme1390I | CCNGG | 1 cut(s) | 798 |
| Bme18I | GGWCC | 1 cut(s) | 470 |
| BmeT110I | CYCGRG | 1 cut(s) | 291 |
| BmgT120I | GGNCC | 1 cut(s) | 470 |
| BmiI | GGNNCC | 3 cut(s) | 14, 471, 774 |
| BmrFI | CCNGG | 1 cut(s) | 798 |
| BmsI | GCATC | 1 cut(s) | 367 |
| BpmI | CTGGAG | 1 cut(s) | 263 |
| Bpu10I | CCTNAGC | 2 cut(s) | 17, 693 |
| Bpu14I | TTCGAA | 1 cut(s) | 578 |
| BpuMI | CCSGG | 1 cut(s) | 798 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 421, 648 |
| BseGI | GGATG | 3 cut(s) | 336, 382, 703 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 421, 648 |
| BseMII | CTCAG | 2 cut(s) | 684, 759 |
| BseRI | GAGGAG | 1 cut(s) | 748 |
| BseXI | GCAGC | 2 cut(s) | 517, 565 |
| BsgI | GTGCAG | 1 cut(s) | 231 |
| BsiHKCI | CYCGRG | 1 cut(s) | 291 |
| BsiSI | CCGG | 1 cut(s) | 798 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 421, 648 |
| BsmAI | GTCTC | 2 cut(s) | 237, 294 |
| BsmI | GAATGC | 1 cut(s) | 574 |
| BsoBI | CYCGRG | 1 cut(s) | 291 |
| Bsp119I | TTCGAA | 1 cut(s) | 578 |
| Bsp143I | GATC | 4 cut(s) | 333, 590, 630, 651 |
| BspACI | CCGC | 1 cut(s) | 677 |
| BspCNI | CTCAG | 2 cut(s) | 685, 760 |
| BspLI | GGNNCC | 3 cut(s) | 14, 471, 774 |
| BspMI | ACCTGC | 1 cut(s) | 274 |
| BspPI | GGATC | 2 cut(s) | 328, 659 |
| BspT104I | TTCGAA | 1 cut(s) | 578 |
| BssMI | GATC | 4 cut(s) | 333, 590, 630, 651 |
| Bst4CI | ACNGT | 2 cut(s) | 231, 638 |
| BstBI | TTCGAA | 1 cut(s) | 578 |
| BstC8I | GCNNGC | 2 cut(s) | 198, 788 |
| BstDEI | CTNAG | 4 cut(s) | 17, 482, 693, 768 |
| BstF5I | GGATG | 3 cut(s) | 336, 382, 703 |
| BstHHI | GCGC | 1 cut(s) | 493 |
| BstKTI | GATC | 4 cut(s) | 336, 593, 633, 654 |
| BstMAI | GTCTC | 2 cut(s) | 237, 294 |
| BstMBI | GATC | 4 cut(s) | 333, 590, 630, 651 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 539 |
| BstSCI | CCNGG | 1 cut(s) | 796 |
| BstV1I | GCAGC | 2 cut(s) | 517, 565 |
| BsuI | GTATCC | 1 cut(s) | 757 |
| BtsCI | GGATG | 3 cut(s) | 336, 382, 703 |
| BveI | ACCTGC | 1 cut(s) | 274 |
| Cac8I | GCNNGC | 2 cut(s) | 198, 788 |
| CfoI | GCGC | 1 cut(s) | 493 |
| Cfr13I | GGNCC | 1 cut(s) | 470 |
| Csp6I | GTAC | 4 cut(s) | 41, 264, 794, 817 |
| CviAII | CATG | 2 cut(s) | 494, 515 |
| CviQI | GTAC | 4 cut(s) | 41, 264, 794, 817 |
| DdeI | CTNAG | 4 cut(s) | 17, 482, 693, 768 |
| DpnI | GATC | 4 cut(s) | 335, 592, 632, 653 |
| DpnII | GATC | 4 cut(s) | 333, 590, 630, 651 |
| Eco47I | GGWCC | 1 cut(s) | 470 |
| Eco57I | CTGAAG | 3 cut(s) | 77, 186, 240 |
| Eco88I | CYCGRG | 1 cut(s) | 291 |
| FaeI | CATG | 2 cut(s) | 497, 518 |
| FatI | CATG | 2 cut(s) | 493, 514 |
| FauI | CCCGC | 1 cut(s) | 670 |
| FauNDI | CATATG | 1 cut(s) | 417 |
| FblI | GTMKAC | 1 cut(s) | 411 |
| Fnu4HI | GCNGC | 2 cut(s) | 531, 554 |
| FokI | GGATG | 3 cut(s) | 343, 389, 710 |
| Fsp4HI | GCNGC | 2 cut(s) | 531, 554 |
| FspAI | RTGCGCAY | 1 cut(s) | 492 |
| FspBI | CTAG | 3 cut(s) | 45, 539, 624 |
| FspI | TGCGCA | 1 cut(s) | 492 |
| GlaI | GCGC | 1 cut(s) | 492 |
| GluI | GCNGC | 2 cut(s) | 531, 554 |
| GsuI | CTGGAG | 1 cut(s) | 263 |
| HapII | CCGG | 1 cut(s) | 798 |
| HhaI | GCGC | 1 cut(s) | 493 |
| Hin1II | CATG | 2 cut(s) | 497, 518 |
| Hin6I | GCGC | 1 cut(s) | 491 |
| HinP1I | GCGC | 1 cut(s) | 491 |
| HincII | GTYRAC | 2 cut(s) | 168, 412 |
| HindII | GTYRAC | 2 cut(s) | 168, 412 |
| HindIII | AAGCTT | 1 cut(s) | 257 |
| HinfI | GANTC | 1 cut(s) | 521 |
| HpaII | CCGG | 1 cut(s) | 798 |
| HphI | GGTGA | 1 cut(s) | 727 |
| Hpy166II | GTNNAC | 2 cut(s) | 168, 412 |
| Hpy188I | TCNGA | 6 cut(s) | 96, 330, 597, 615, 769, 843 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 137, 218, 473 |
| Hpy8I | GTNNAC | 2 cut(s) | 168, 412 |
| HpyAV | CCTTC | 3 cut(s) | 43, 415, 491 |
| HpyCH4III | ACNGT | 2 cut(s) | 231, 638 |
| HpyCH4V | TGCA | 4 cut(s) | 123, 226, 248, 533 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 539 |
| HpyF3I | CTNAG | 4 cut(s) | 17, 482, 693, 768 |
| Hsp92II | CATG | 2 cut(s) | 497, 518 |
| HspAI | GCGC | 1 cut(s) | 491 |
| Kzo9I | GATC | 4 cut(s) | 333, 590, 630, 651 |
| LmnI | GCTCC | 3 cut(s) | 18, 26, 282 |
| Lsp1109I | GCAGC | 2 cut(s) | 517, 565 |
| LweI | GCATC | 1 cut(s) | 367 |
| MaeI | CTAG | 3 cut(s) | 45, 539, 624 |
| MaeIII | GTNAC | 1 cut(s) | 440 |
| MalI | GATC | 4 cut(s) | 335, 592, 632, 653 |
| MboI | GATC | 4 cut(s) | 333, 590, 630, 651 |
| MboII | GAAGA | 6 cut(s) | 201, 322, 376, 596, 736, 752 |
| MluCI | AATT | 4 cut(s) | 77, 182, 477, 608 |
| MlyI | GAGTC | 1 cut(s) | 530 |
| MmeI | TCCRAC | 1 cut(s) | 620 |
| MseI | TTAA | 1 cut(s) | 384 |
| MslI | CAYNNNNRTG | 1 cut(s) | 401 |
| MspI | CCGG | 1 cut(s) | 798 |
| MspR9I | CCNGG | 1 cut(s) | 798 |
| Mva1269I | GAATGC | 1 cut(s) | 574 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 539 |
| NciI | CCSGG | 1 cut(s) | 798 |
| NdeI | CATATG | 1 cut(s) | 417 |
| NdeII | GATC | 4 cut(s) | 333, 590, 630, 651 |
| NlaIII | CATG | 2 cut(s) | 497, 518 |
| NlaIV | GGNNCC | 3 cut(s) | 14, 471, 774 |
| NmeAIII | GCCGAG | 1 cut(s) | 544 |
| NsbI | TGCGCA | 1 cut(s) | 492 |
| NspV | TTCGAA | 1 cut(s) | 578 |
| PaqCI | CACCTGC | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 574 |
| PkrI | GCNGC | 2 cut(s) | 532, 555 |
| PleI | GAGTC | 1 cut(s) | 529 |
| PpsI | GAGTC | 1 cut(s) | 529 |
| PspN4I | GGNNCC | 3 cut(s) | 14, 471, 774 |
| PspPI | GGNCC | 1 cut(s) | 470 |
| RsaI | GTAC | 4 cut(s) | 42, 265, 795, 818 |
| RsaNI | GTAC | 4 cut(s) | 41, 264, 794, 817 |
| RseI | CAYNNNNRTG | 1 cut(s) | 401 |
| SalI | GTCGAC | 1 cut(s) | 410 |
| SaqAI | TTAA | 1 cut(s) | 384 |
| SatI | GCNGC | 2 cut(s) | 531, 554 |
| Sau3AI | GATC | 4 cut(s) | 333, 590, 630, 651 |
| Sau96I | GGNCC | 1 cut(s) | 470 |
| SchI | GAGTC | 1 cut(s) | 530 |
| ScrFI | CCNGG | 1 cut(s) | 798 |
| SfaNI | GCATC | 1 cut(s) | 367 |
| SfuI | TTCGAA | 1 cut(s) | 578 |
| SinI | GGWCC | 1 cut(s) | 470 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 401 |
| Sse9I | AATT | 4 cut(s) | 77, 182, 477, 608 |
| SsiI | CCGC | 1 cut(s) | 677 |
| SspMI | CTAG | 3 cut(s) | 45, 539, 624 |
| StyD4I | CCNGG | 1 cut(s) | 796 |
| TaaI | ACNGT | 2 cut(s) | 231, 638 |
| TaqI | TCGA | 5 cut(s) | 138, 305, 411, 578, 813 |
| TasI | AATT | 4 cut(s) | 77, 182, 477, 608 |
| Tru1I | TTAA | 1 cut(s) | 384 |
| Tru9I | TTAA | 1 cut(s) | 384 |
| TseI | GCWGC | 2 cut(s) | 530, 553 |
| TspDTI | ATGAA | 5 cut(s) | 323, 385, 419, 434, 510 |
| VpaK11BI | GGWCC | 1 cut(s) | 470 |
| XapI | RAATTY | 2 cut(s) | 182, 477 |
| XmiI | GTMKAC | 1 cut(s) | 411 |
| XspI | CTAG | 3 cut(s) | 45, 539, 624 |