Rorug06G0099700

Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
13268241 .. 13272733
4493 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0099700.1

Sequence Viewer

Length: 1686 bp
ATGACGGAAGACAAAGATCGACAGCCGGAAACCGCCGGCGACAGTGCAAAGCGGAAGCTGGAAGACCCCGCCGCCATTAGTATTCTGCTCGCGAAACAGAAAGCTCAGGAAATCGCCGCTCGACTCGTCACCAATGCCGAGTCGAAGCGCCCCCGAGTCGACGACGAGTCCTTCCAACCCAACCCCGTCTACACCCCTCCCGCTTACCCTGTGTTCACTGCACAAACAGGCCACTCTTATGGTTCAGGCACCAGCAAGAAAATAGATATTCCAAATGGGAAGGTTGGTGTAATTATTGGAAAACAAGGAGAAACAATAAGACAACTGCAATTACAGTCAGGGGCCAAAATCCAGATAACCAGGGATTCAGAAGCTGATCTTAATTCTCTAACTAGGGATGTGGAGTTGACGGGTACATCTGAACAGATTAGTAGGGCAGAACAACTTATCAATGATGTAATAGCTGAGGCAGATGCAGGGGGCTCTGCTCCATCTACAAATCAGGGATTTAACTCGATGCAACCTGGAGGAGGGGAACAGTTTGTCATGAAAGTTCCAAACAATAAGGTTGCTTTGATAATTGGCAAGGGGGGTGAGACTATCAGGAATATGCAAACCAAGTCAGGAGCTCGTATTCAGATTGTACCATTGCACCTTCCTCCTGGTGATATGTCAACTGAGAGATCAGTATACATAAATGGAGGGCAAGAGCAAATTGAGGCAGCCAAAGAATTGGTGAACGAAGTAATCAGTGGGAAGCGTTTATTAAATGCCTCTGGAGCCAATAGCTATATGCAGCAGCCATCCTATCCCCCTTCTGGTAATTGGGCCCCACCAGGACAACCTCCAATTCAGCAACAGCAGCCTCATTATGGGTATACACAACCTGGAGGTTATGGTACACCTCCGGCACCTCCCTCGTACTATGGTAATTATCCGGCTCAGGTAGCAGGTTGGGATCAGTCAAACCAGGTACCTTCTCAACCACCTCAGGATAGCAGTGGGTACAATTATTATGGACAACAACCACCGATGGGGTCAGCTCCCCCAAATCCTGGCTACTACAATCAGACATCTCAGGGTTATGCTCAGCAGCCACCAAATTATGATCAGGGTTATGCTCAGCAGCCACCAAGTTATGATCAGAGTTACGCTCAGCAACCTCCAAGTTACGATCAGAGTTATGCTCAGCAGCCACCAAATTATGGACAAAACATCTCTAGTCAGGCTCCAGCATCTGATCAGCAACAATATGCAACTTCTGGATATGGGCCACCTGCAGTGTCATCAAGCCTAGATGGAAGCTCTTCCGCACAAACGACTCAGCCATCTTCTGCCTATGCACCTCCTTACGGCCAGCCAACAGATAACCCTCAGTCTGGGTATTGGTCTCATCCGAGCAGCACAGGCCAACCACACGCTCAAGCAGGCTATTACCAACCAAGTTACGGAGGGCAGCAGCCAGCTGAAGATGCTTCTGCAGCATCATACGGACAAGGTGGGTATGCTCAGCCAGACCCTTCTGCCAATGGAGAGTCACAGCATCAGCCAGAGCAGCAGTCACAGCCACCTACCAATGGATATGCAGACCAGTCGTCAGCTTCTGAAGCTGAAAGGACTGGTGAGAGGAATGTAGAAGGAGATGGATCAGCCCCTCCAACGGAATCTGTTGGTTCTCAAAACTGA

Protein Analysis

561

Amino Acids

59.69

Weight (kDa)

4.7

Isoelectric Point (pI)

63.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 86 - 152 6.1e-17 KH domain
KH_1 PF00013 182 - 248 2.8e-18 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000288)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22660 AT1G22660 AT1G22660 AT1G22660 AT1G22660
fragaria_vesca FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440
malus_domestica MD05G1045700.v1.1 MD10G1052700.v1.1
prunus_persica Prupe.6G147900_v2.0.a1 Prupe.6G147900_v2.0.a1
pyrus_communis pycom05g03810 pycom10g03770
rosa_chinensis RchiOBHm_Chr3g0457671 RchiOBHm_Chr4g0411681 RchiOBHm_Chr4g0411871 RchiOBHm_Chr4g0412011 RchiOBHm_Chr4g0442691 RchiOBHm_Chr5g0054011 RchiOBHm_Chr7g0192731 RchiOBHm_Chr7g0217301 RchiOBHm_Chr7g0217311
rosa_laevigata RLG00000002496 RLG00000002497 RLG00000004333 RLG00000005141 RLG00000005991 RLG00000008329 RLG00000008334
rosa_multiflora Rmu_co8052866.1_g000001 Rmu_sc0000124.1_g000041 Rmu_sc0000711.1_g000018 Rmu_sc0000711.1_g000026 Rmu_sc0000711.1_g000049 Rmu_sc0001260.1_g000024 Rmu_sc0002040.1_g000016 Rmu_sc0003311.1_g000009 Rmu_sc0003541.1_g000049 Rmu_sc0007633.1_g000011 Rmu_sc0007784.1_g000001 Rmu_sc0007843.1_g000002 Rmu_sc0018873.1_g000007 Rmu_sc0037239.1_g000001 Rmu_ssc0000204.1_g000025
rosa_roxburghii Rroxscaffold_1G00010150 Rroxscaffold_2G00085070 Rroxscaffold_3G00237950 Rroxscaffold_3G00238000 Rroxscaffold_3G00238060 Rroxscaffold_3G00242460 Rroxscaffold_5G00356230 Rroxscaffold_5G00356320 Rroxscaffold_5G00357990 Rroxscaffold_5G00383500
rosa_rugosa Rorug04G0107400 Rorug04G0107400 Rorug04G0342400.1 Rorug04G0342500.1 Rorug04G0342600.1 Rorug06G0053100 Rorug06G0099700 Rorug07G0004300 Rorug07G0167800 Rorug07G0167900
rosa_samantha Rh2CG570300 Rh2DG609200 Rh4AG068500 Rh4AG169600 Rh4AG169900 Rh4AG170200 Rh4AG170600 Rh4AG202600 Rh4AG394800 Rh4BG066700 Rh4BG066800 Rh4BG166500 Rh4BG166600 Rh4BG166700 Rh4BG167000 Rh4BG167300 Rh4BG168500 Rh4BG169200 Rh4BG208600 Rh4BG407700 Rh4CG074000 Rh4CG181100 Rh4CG181200 Rh4CG181700 Rh4CG423100 Rh4DG163900 Rh4DG164400 Rh4DG165100 Rh4DG165200 Rh4DG200000 Rh4DG401800 Rh6BG194500 Rh6CG100200 Rh7AG129300 Rh7AG307100 Rh7BG130700 Rh7BG298000 Rh7CG134100 Rh7DG131500 Rh7DG306700
rosa_wichuraiana Rw0G007750 Rw4G014080 Rw4G014120 Rw4G014180 Rw4G017150 Rw4G034120 Rw7G011060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1285
Acc36I ACCTGC 2 cut(s) 941, 1285
Acc65I GGTACC 1 cut(s) 973
AccB1I GGYRCC 3 cut(s) 248, 910, 973
AccB7I CCANNNNNTGG 2 cut(s) 1055, 1205
AccBSI CCGCTC 1 cut(s) 119
AccI GTMKAC 4 cut(s) 159, 189, 690, 878
AccII CGCG 1 cut(s) 92
AciI CCGC 7 cut(s) 33, 52, 69, 72, 117, 201, 1311
AclWI GGATC 2 cut(s) 966, 1654
AcoI YGGCCR 1 cut(s) 1354
AcuI CTGAAG 2 cut(s) 1488, 1626
AfaI GTAC 6 cut(s) 415, 645, 901, 923, 975, 1007
AhdI GACNNNNNGTC 2 cut(s) 166, 1594
AjnI CCWGG 7 cut(s) 359, 523, 661, 835, 886, 969, 1054
Alw21I GWGCWC 1 cut(s) 631
Alw26I GTCTC 2 cut(s) 590, 1395
AlwI GGATC 2 cut(s) 966, 1654
AlwNI CAGNNNCTG 3 cut(s) 374, 1238, 1604
Ama87I CYCGRG 1 cut(s) 153
AoxI GGCC 6 cut(s) 229, 342, 828, 1271, 1354, 1408
ApaI GGGCCC 1 cut(s) 832
Asp700I GAANNNNTTC 1 cut(s) 1306
Asp718I GGTACC 1 cut(s) 973
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 4 cut(s) 342, 828, 829, 1271
AsuHPI GGTGA 5 cut(s) 121, 605, 677, 748, 1634
AvaI CYCGRG 1 cut(s) 153
AxyI CCTNAGG 1 cut(s) 990
BaeGI GKGCMC 1 cut(s) 832
BanI GGYRCC 3 cut(s) 248, 910, 973
BanII GRGCYC 3 cut(s) 485, 631, 832
BbsI GAAGAC 2 cut(s) 15, 69
Bbv12I GWGCWC 1 cut(s) 631
BbvCI CCTCAGC 1 cut(s) 465
BccI CCATC 6 cut(s) 499, 811, 1027, 1292, 1336, 1637
BceAI ACGGC 1 cut(s) 1369
BcgI CGANNNNNNTGC 4 cut(s) 900, 934, 1575, 1609
BciT130I CCWGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
BclI TGATCA 3 cut(s) 1108, 1141, 1240
BcoDI GTCTC 2 cut(s) 590, 1395
BfaI CTAG 3 cut(s) 393, 1221, 1295
BfmI CTRYAG 2 cut(s) 1278, 1479
BfoI RGCGCY 1 cut(s) 151
BfuAI ACCTGC 2 cut(s) 941, 1285
BlpI GCTNAGC 5 cut(s) 1089, 1122, 1155, 1188, 1509
Bme1390I CCNGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
BmeRI GACNNNNNGTC 2 cut(s) 166, 1594
BmeT110I CYCGRG 1 cut(s) 153
BmgT120I GGNCC 4 cut(s) 342, 828, 829, 1271
BmiI GGNNCC 8 cut(s) 250, 343, 781, 830, 831, 912, 975, 1230
BmrFI CCNGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
BmsI GCATC 6 cut(s) 463, 507, 1244, 1462, 1493, 1552
BpiI GAAGAC 2 cut(s) 15, 69
BplI GAGNNNNNCTC 4 cut(s) 1138, 1170, 1171, 1203
BpmI CTGGAG 4 cut(s) 546, 798, 909, 1215
Bpu10I CCTNAGC 3 cut(s) 105, 465, 942
Bpu1102I GCTNAGC 5 cut(s) 1089, 1122, 1155, 1188, 1509
BpuEI CTTGAG 1 cut(s) 1407
BsaI GGTCTC 1 cut(s) 1395
BsaJI CCNNGG 1 cut(s) 360
Bse118I RCCGGY 1 cut(s) 35
Bse1I ACTGG 2 cut(s) 1591, 1624
Bse21I CCTNAGG 1 cut(s) 990
Bse3DI GCAATG 1 cut(s) 647
BseBI CCWGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
BseDI CCNNGG 1 cut(s) 360
BseGI GGATG 3 cut(s) 403, 803, 1393
BseMI GCAATG 1 cut(s) 647
BseNI ACTGG 2 cut(s) 1591, 1624
BseRI GAGGAG 1 cut(s) 543
BseSI GKGCMC 1 cut(s) 832
BsgI GTGCAG 1 cut(s) 204
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 6 cut(s) 231, 344, 830, 1273, 1356, 1410
BshNI GGYRCC 3 cut(s) 248, 910, 973
BsiHKAI GWGCWC 1 cut(s) 631
BsiHKCI CYCGRG 1 cut(s) 153
BsiSI CCGG 4 cut(s) 26, 36, 908, 938
BsmAI GTCTC 2 cut(s) 590, 1395
BsnI GGCC 6 cut(s) 231, 344, 830, 1273, 1356, 1410
Bso31I GGTCTC 1 cut(s) 1395
BsoBI CYCGRG 1 cut(s) 153
Bsp120I GGGCCC 1 cut(s) 828
Bsp1286I GDGCHC 3 cut(s) 485, 631, 832
Bsp143I GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
Bsp1720I GCTNAGC 5 cut(s) 1089, 1122, 1155, 1188, 1509
Bsp68I TCGCGA 1 cut(s) 92
BspACI CCGC 7 cut(s) 33, 52, 69, 72, 117, 201, 1311
BspANI GGCC 6 cut(s) 231, 344, 830, 1273, 1356, 1410
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 8 cut(s) 250, 343, 781, 830, 831, 912, 975, 1230
BspMAI CTGCAG 2 cut(s) 1282, 1483
BspMI ACCTGC 2 cut(s) 941, 1285
BspPI GGATC 2 cut(s) 966, 1654
BspQI GCTCTTC 1 cut(s) 1312
BspT107I GGYRCC 3 cut(s) 248, 910, 973
BspTNI GGTCTC 1 cut(s) 1395
BsrBI CCGCTC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 647
BsrFI RCCGGY 1 cut(s) 35
BsrI ACTGG 2 cut(s) 1591, 1624
BssAI RCCGGY 1 cut(s) 35
BssECI CCNNGG 1 cut(s) 360
BssMI GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
BssNAI GTATAC 2 cut(s) 691, 879
Bst1107I GTATAC 2 cut(s) 691, 879
Bst2UI CCWGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
Bst4CI ACNGT 3 cut(s) 44, 336, 540
Bst6I CTCTTC 1 cut(s) 1312
BstC8I GCNNGC 5 cut(s) 37, 90, 1358, 1429, 1464
BstENI CCTNNNNNAGG 1 cut(s) 528
BstF5I GGATG 3 cut(s) 403, 803, 1393
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 9 cut(s) 19, 379, 686, 961, 1111, 1144, 1177, 1243, 1649
BstMAI GTCTC 2 cut(s) 590, 1395
BstMBI GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
BstMWI GCNNNNNNNGC 9 cut(s) 779, 862, 947, 1407, 1472, 1481, 1555, 1564, 1607
BstNI CCWGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
BstSCI CCNGG 7 cut(s) 359, 523, 661, 835, 886, 969, 1054
BstSFI CTRYAG 2 cut(s) 1278, 1479
BstSLI GKGCMC 1 cut(s) 832
BstUI CGCG 1 cut(s) 92
BstV2I GAAGAC 2 cut(s) 15, 69
BstXI CCANNNNNNTGG 2 cut(s) 239, 733
BstZ17I GTATAC 2 cut(s) 691, 879
Bsu36I CCTNAGG 1 cut(s) 990
BsuRI GGCC 6 cut(s) 231, 344, 830, 1273, 1356, 1410
BtsCI GGATG 3 cut(s) 403, 803, 1393
BtsI GCAGTG 3 cut(s) 216, 1006, 1287
BtsIMutI CAGTG 5 cut(s) 49, 216, 757, 1006, 1287
BtuMI TCGCGA 1 cut(s) 92
BveI ACCTGC 2 cut(s) 941, 1285
Cac8I GCNNGC 5 cut(s) 37, 90, 1358, 1429, 1464
CaiI CAGNNNCTG 3 cut(s) 374, 1238, 1604
CciI TCATGA 1 cut(s) 546
CfoI GCGC 1 cut(s) 150
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 4 cut(s) 342, 828, 829, 1271
CsiI ACCWGGT 1 cut(s) 969
Csp6I GTAC 6 cut(s) 414, 644, 900, 922, 974, 1006
CviAII CATG 1 cut(s) 547
CviQI GTAC 6 cut(s) 414, 644, 900, 922, 974, 1006
DpnI GATC 9 cut(s) 18, 378, 685, 960, 1110, 1143, 1176, 1242, 1648
DpnII GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
DriI GACNNNNNGTC 2 cut(s) 166, 1594
EaeI YGGCCR 1 cut(s) 1354
Eam1104I CTCTTC 1 cut(s) 1312
Eam1105I GACNNNNNGTC 2 cut(s) 166, 1594
EarI CTCTTC 1 cut(s) 1312
Ecl136II GAGCTC 1 cut(s) 629
Eco24I GRGCYC 3 cut(s) 485, 631, 832
Eco31I GGTCTC 1 cut(s) 1395
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 2 cut(s) 1488, 1626
Eco81I CCTNAGG 1 cut(s) 990
Eco88I CYCGRG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 629
EcoNI CCTNNNNNAGG 1 cut(s) 528
EcoO109I RGGNCCY 1 cut(s) 829
EcoRII CCWGG 7 cut(s) 359, 523, 661, 835, 886, 969, 1054
EcoT38I GRGCYC 3 cut(s) 485, 631, 832
FaeI CATG 1 cut(s) 550
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FatI CATG 1 cut(s) 546
FauI CCCGC 2 cut(s) 76, 208
FbaI TGATCA 3 cut(s) 1108, 1141, 1240
FblI GTMKAC 4 cut(s) 159, 189, 690, 878
FokI GGATG 3 cut(s) 410, 790, 1380
FriOI GRGCYC 3 cut(s) 485, 631, 832
FspBI CTAG 3 cut(s) 393, 1221, 1295
GlaI GCGC 1 cut(s) 149
GsuI CTGGAG 4 cut(s) 546, 798, 909, 1215
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 6 cut(s) 231, 344, 830, 1273, 1356, 1410
HapII CCGG 4 cut(s) 26, 36, 908, 938
HhaI GCGC 1 cut(s) 150
Hin1II CATG 1 cut(s) 550
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HincII GTYRAC 3 cut(s) 160, 408, 675
HindII GTYRAC 3 cut(s) 160, 408, 675
HinfI GANTC 8 cut(s) 123, 140, 156, 167, 365, 1321, 1535, 1664
HpaII CCGG 4 cut(s) 26, 36, 908, 938
HphI GGTGA 5 cut(s) 121, 605, 677, 748, 1634
Hpy166II GTNNAC 9 cut(s) 160, 190, 216, 408, 675, 691, 739, 879, 902
Hpy188I TCNGA 9 cut(s) 370, 421, 639, 1071, 1146, 1179, 1240, 1398, 1606
Hpy188III TCNNGA 9 cut(s) 91, 107, 352, 547, 604, 624, 777, 992, 1263
Hpy8I GTNNAC 9 cut(s) 160, 190, 216, 408, 675, 691, 739, 879, 902
Hpy99I CGWCG 2 cut(s) 164, 167
HpyAV CCTTC 7 cut(s) 181, 274, 665, 825, 987, 1530, 1631
HpyCH4III ACNGT 3 cut(s) 44, 336, 540
HpyF10VI GCNNNNNNNGC 9 cut(s) 779, 862, 947, 1407, 1472, 1481, 1555, 1564, 1607
Hsp92II CATG 1 cut(s) 550
HspAI GCGC 1 cut(s) 148
KpnI GGTACC 1 cut(s) 977
KroI GCCGGC 1 cut(s) 35
KroNI GCCGGC 1 cut(s) 37
Ksp22I TGATCA 3 cut(s) 1108, 1141, 1240
Kzo9I GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
LguI GCTCTTC 1 cut(s) 1312
LmnI GCTCC 5 cut(s) 493, 626, 779, 1048, 1234
LweI GCATC 6 cut(s) 463, 507, 1244, 1462, 1493, 1552
MabI ACCWGGT 1 cut(s) 969
MaeI CTAG 3 cut(s) 393, 1221, 1295
MaeIII GTNAC 6 cut(s) 127, 1148, 1169, 1445, 1536, 1560
MalI GATC 9 cut(s) 18, 378, 685, 960, 1110, 1143, 1176, 1242, 1648
MbiI CCGCTC 1 cut(s) 119
MboI GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
MboII GAAGA 5 cut(s) 20, 74, 1299, 1323, 1481
MhlI GDGCHC 3 cut(s) 485, 631, 832
MlyI GAGTC 6 cut(s) 117, 149, 165, 176, 1315, 1544
MmeI TCCRAC 2 cut(s) 199, 1682
MreI CGCCGGCG 1 cut(s) 35
MroNI GCCGGC 1 cut(s) 35
MroXI GAANNNNTTC 1 cut(s) 1306
MseI TTAA 3 cut(s) 381, 510, 767
MslI CAYNNNNRTG 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 1466
MspI CCGG 4 cut(s) 26, 36, 908, 938
MspR9I CCNGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
MvaI CCWGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 9 cut(s) 779, 862, 947, 1407, 1472, 1481, 1555, 1564, 1607
NaeI GCCGGC 1 cut(s) 37
NdeII GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
NgoMIV GCCGGC 1 cut(s) 35
NlaIII CATG 1 cut(s) 550
NlaIV GGNNCC 8 cut(s) 250, 343, 781, 830, 831, 912, 975, 1230
NmeAIII GCCGAG 1 cut(s) 163
NmuCI GTSAC 3 cut(s) 127, 1536, 1560
NruI TCGCGA 1 cut(s) 92
PagI TCATGA 1 cut(s) 546
PaqCI CACCTGC 1 cut(s) 1285
PciSI GCTCTTC 1 cut(s) 1312
PdiI GCCGGC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 1306
PfeI GAWTC 2 cut(s) 365, 1664
PflMI CCANNNNNTGG 2 cut(s) 1055, 1205
PleI GAGTC 6 cut(s) 117, 148, 164, 175, 1315, 1543
PpsI GAGTC 6 cut(s) 117, 148, 164, 175, 1315, 1543
Psp124BI GAGCTC 1 cut(s) 631
Psp6I CCWGG 7 cut(s) 359, 523, 661, 835, 886, 969, 1054
PspGI CCWGG 7 cut(s) 359, 523, 661, 835, 886, 969, 1054
PspN4I GGNNCC 8 cut(s) 250, 343, 781, 830, 831, 912, 975, 1230
PspOMI GGGCCC 1 cut(s) 828
PspPI GGNCC 4 cut(s) 342, 828, 829, 1271
PstI CTGCAG 2 cut(s) 1282, 1483
PstNI CAGNNNCTG 3 cut(s) 374, 1238, 1604
PvuII CAGCTG 1 cut(s) 1466
RruI TCGCGA 1 cut(s) 92
RsaI GTAC 6 cut(s) 415, 645, 901, 923, 975, 1007
RsaNI GTAC 6 cut(s) 414, 644, 900, 922, 974, 1006
RseI CAYNNNNRTG 1 cut(s) 237
SacI GAGCTC 1 cut(s) 631
SalI GTCGAC 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 1312
SaqAI TTAA 3 cut(s) 381, 510, 767
Sau3AI GATC 9 cut(s) 16, 376, 683, 958, 1108, 1141, 1174, 1240, 1646
Sau96I GGNCC 4 cut(s) 342, 828, 829, 1271
SchI GAGTC 6 cut(s) 117, 149, 165, 176, 1315, 1544
ScrFI CCNGG 7 cut(s) 361, 525, 663, 837, 888, 971, 1056
SduI GDGCHC 3 cut(s) 485, 631, 832
SexAI ACCWGGT 1 cut(s) 969
SfaNI GCATC 6 cut(s) 463, 507, 1244, 1462, 1493, 1552
SfcI CTRYAG 2 cut(s) 1278, 1479
SgrAI CRCCGGYG 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 237
SmlI CTYRAG 1 cut(s) 1422
SmoI CTYRAG 1 cut(s) 1422
SsiI CCGC 7 cut(s) 33, 52, 69, 72, 117, 201, 1311
SspMI CTAG 3 cut(s) 393, 1221, 1295
SstI GAGCTC 1 cut(s) 631
StyD4I CCNGG 7 cut(s) 359, 523, 661, 835, 886, 969, 1054
TaaI ACNGT 3 cut(s) 44, 336, 540
TaqI TCGA 5 cut(s) 19, 121, 143, 159, 515
TauI GCSGC 2 cut(s) 74, 119
TfiI GAWTC 2 cut(s) 365, 1664
Tru1I TTAA 3 cut(s) 381, 510, 767
Tru9I TTAA 3 cut(s) 381, 510, 767
TscAI CASTG 5 cut(s) 49, 223, 757, 1006, 1287
TseFI GTSAC 3 cut(s) 127, 1536, 1560
Tsp45I GTSAC 3 cut(s) 127, 1536, 1560
TspDTI ATGAA 1 cut(s) 563
TspGWI ACGGA 4 cut(s) 20, 1464, 1506, 1676
TspRI CASTG 5 cut(s) 49, 223, 757, 1006, 1287
Van91I CCANNNNNTGG 2 cut(s) 1055, 1205
XagI CCTNNNNNAGG 1 cut(s) 528
XmiI GTMKAC 4 cut(s) 159, 189, 690, 878
XmnI GAANNNNTTC 1 cut(s) 1306
XspI CTAG 3 cut(s) 393, 1221, 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.