Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PolyA_pol | PF01743 | 110 - 248 | 9.2e-29 | Poly A polymerase head domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 312, 1259 |
| AarI | CACCTGC | 1 cut(s) | 329 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 754 |
| Acc16I | TGCGCA | 1 cut(s) | 533 |
| Acc36I | ACCTGC | 1 cut(s) | 329 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 791 |
| AciI | CCGC | 2 cut(s) | 1028, 1301 |
| AclWI | GGATC | 8 cut(s) | 657, 776, 789, 1130, 1305, 1318, 1478, 1521 |
| AcsI | RAATTY | 5 cut(s) | 194, 202, 597, 1191, 1204 |
| AcuI | CTGAAG | 4 cut(s) | 942, 967, 1683, 1728 |
| AfaI | GTAC | 8 cut(s) | 19, 80, 136, 443, 581, 1169, 1413, 1751 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 791, 1081, 1307 |
| AflII | CTTAAG | 1 cut(s) | 1226 |
| AflIII | ACRYGT | 1 cut(s) | 75 |
| AgsI | TTSAA | 9 cut(s) | 254, 283, 319, 698, 842, 891, 1392, 1492, 1747 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1649 |
| AhlI | ACTAGT | 1 cut(s) | 835 |
| AjnI | CCWGG | 1 cut(s) | 30 |
| Alw21I | GWGCWC | 1 cut(s) | 69 |
| Alw44I | GTGCAC | 1 cut(s) | 65 |
| AlwI | GGATC | 8 cut(s) | 657, 776, 789, 1130, 1305, 1318, 1478, 1521 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1253, 1706 |
| AoxI | GGCC | 1 cut(s) | 1091 |
| ApaI | GGGCCC | 1 cut(s) | 1095 |
| ApaLI | GTGCAC | 1 cut(s) | 65 |
| ApeKI | GCWGC | 7 cut(s) | 529, 857, 860, 881, 1136, 1465, 1684 |
| ApoI | RAATTY | 5 cut(s) | 194, 202, 597, 1191, 1204 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 465, 1191, 1739 |
| AspA2I | CCTAGG | 1 cut(s) | 1561 |
| AspLEI | GCGC | 4 cut(s) | 226, 534, 1328, 1547 |
| AspS9I | GGNCC | 6 cut(s) | 349, 705, 1091, 1092, 1627, 1643 |
| AsuC2I | CCSGG | 1 cut(s) | 736 |
| AsuHPI | GGTGA | 2 cut(s) | 750, 1042 |
| AsuII | TTCGAA | 1 cut(s) | 487 |
| AvaII | GGWCC | 4 cut(s) | 349, 705, 1627, 1643 |
| AvrII | CCTAGG | 1 cut(s) | 1561 |
| BaeGI | GKGCMC | 2 cut(s) | 69, 1095 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 534, 567 |
| BamHI | GGATCC | 2 cut(s) | 781, 1310 |
| BanII | GRGCYC | 1 cut(s) | 1095 |
| BbsI | GAAGAC | 2 cut(s) | 326, 1001 |
| Bbv12I | GWGCWC | 1 cut(s) | 69 |
| BbvI | GCAGC | 7 cut(s) | 516, 844, 847, 893, 1148, 1452, 1696 |
| BccI | CCATC | 5 cut(s) | 339, 403, 1039, 1316, 1411 |
| BceAI | ACGGC | 1 cut(s) | 193 |
| BciT130I | CCWGG | 1 cut(s) | 32 |
| BcnI | CCSGG | 1 cut(s) | 736 |
| BcuI | ACTAGT | 1 cut(s) | 835 |
| BfaI | CTAG | 4 cut(s) | 62, 836, 1562, 1753 |
| BfoI | RGCGCY | 1 cut(s) | 1548 |
| BfrI | CTTAAG | 1 cut(s) | 1226 |
| BfuAI | ACCTGC | 1 cut(s) | 329 |
| BglII | AGATCT | 2 cut(s) | 276, 724 |
| BisI | GCNGC | 7 cut(s) | 530, 858, 861, 882, 1137, 1466, 1685 |
| BlnI | CCTAGG | 1 cut(s) | 1561 |
| BlsI | GCNGC | 7 cut(s) | 531, 859, 862, 883, 1138, 1467, 1686 |
| BmcAI | AGTACT | 2 cut(s) | 1413, 1751 |
| Bme1390I | CCNGG | 2 cut(s) | 32, 736 |
| Bme18I | GGWCC | 4 cut(s) | 349, 705, 1627, 1643 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1649 |
| BmgT120I | GGNCC | 6 cut(s) | 349, 705, 1091, 1092, 1627, 1643 |
| BmiI | GGNNCC | 5 cut(s) | 350, 783, 1093, 1312, 1357 |
| BmrFI | CCNGG | 2 cut(s) | 32, 736 |
| BmsI | GCATC | 3 cut(s) | 625, 726, 1234 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1563 |
| BpiI | GAAGAC | 2 cut(s) | 326, 1001 |
| Bpu14I | TTCGAA | 1 cut(s) | 487 |
| BpuMI | CCSGG | 1 cut(s) | 736 |
| Bsa29I | ATCGAT | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 2 cut(s) | 31, 1561 |
| BsaWI | WCCGGW | 1 cut(s) | 625 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 170, 200, 909, 939, 1632, 1662 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 791, 1081, 1307 |
| Bse1I | ACTGG | 4 cut(s) | 785, 864, 1314, 1646 |
| Bse3DI | GCAATG | 4 cut(s) | 385, 390, 645, 1460 |
| BseBI | CCWGG | 1 cut(s) | 32 |
| BseCI | ATCGAT | 1 cut(s) | 258 |
| BseDI | CCNNGG | 2 cut(s) | 31, 1561 |
| BseGI | GGATG | 6 cut(s) | 350, 640, 1003, 1588, 1693, 1734 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 791, 1081, 1307 |
| BseMI | GCAATG | 4 cut(s) | 385, 390, 645, 1460 |
| BseMII | CTCAG | 3 cut(s) | 1031, 1420, 1612 |
| BseNI | ACTGG | 4 cut(s) | 785, 864, 1314, 1646 |
| BseRI | GAGGAG | 1 cut(s) | 1325 |
| BseSI | GKGCMC | 2 cut(s) | 69, 1095 |
| BseXI | GCAGC | 7 cut(s) | 516, 844, 847, 893, 1148, 1452, 1696 |
| BseYI | CCCAGC | 1 cut(s) | 292 |
| BshFI | GGCC | 1 cut(s) | 1093 |
| BshVI | ATCGAT | 1 cut(s) | 258 |
| BsiHKAI | GWGCWC | 1 cut(s) | 69 |
| BsiSI | CCGG | 2 cut(s) | 626, 735 |
| BslFI | GGGAC | 2 cut(s) | 257, 1717 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 791, 1081, 1307 |
| BsmFI | GGGAC | 2 cut(s) | 257, 1717 |
| BsmI | GAATGC | 2 cut(s) | 380, 1721 |
| BsnI | GGCC | 1 cut(s) | 1093 |
| Bsp119I | TTCGAA | 1 cut(s) | 487 |
| Bsp120I | GGGCCC | 1 cut(s) | 1091 |
| Bsp1286I | GDGCHC | 2 cut(s) | 69, 1095 |
| Bsp1407I | TGTACA | 3 cut(s) | 78, 134, 1167 |
| BspACI | CCGC | 2 cut(s) | 1028, 1301 |
| BspANI | GGCC | 1 cut(s) | 1093 |
| BspCNI | CTCAG | 3 cut(s) | 1030, 1419, 1611 |
| BspDI | ATCGAT | 1 cut(s) | 258 |
| BspHI | TCATGA | 1 cut(s) | 933 |
| BspLI | GGNNCC | 5 cut(s) | 350, 783, 1093, 1312, 1357 |
| BspMI | ACCTGC | 1 cut(s) | 329 |
| BspPI | GGATC | 8 cut(s) | 657, 776, 789, 1130, 1305, 1318, 1478, 1521 |
| BspT104I | TTCGAA | 1 cut(s) | 487 |
| BspTI | CTTAAG | 1 cut(s) | 1226 |
| BsrDI | GCAATG | 4 cut(s) | 385, 390, 645, 1460 |
| BsrGI | TGTACA | 3 cut(s) | 78, 134, 1167 |
| BsrI | ACTGG | 4 cut(s) | 785, 864, 1314, 1646 |
| BssECI | CCNNGG | 2 cut(s) | 31, 1561 |
| BssT1I | CCWWGG | 1 cut(s) | 1561 |
| Bst2UI | CCWGG | 1 cut(s) | 32 |
| Bst4CI | ACNGT | 6 cut(s) | 584, 665, 975, 1255, 1365, 1456 |
| Bst6I | CTCTTC | 3 cut(s) | 456, 570, 1704 |
| BstAFI | CTTAAG | 1 cut(s) | 1226 |
| BstAUI | TGTACA | 3 cut(s) | 78, 134, 1167 |
| BstBI | TTCGAA | 1 cut(s) | 487 |
| BstC8I | GCNNGC | 2 cut(s) | 801, 1689 |
| BstDEI | CTNAG | 4 cut(s) | 1017, 1154, 1406, 1598 |
| BstF5I | GGATG | 6 cut(s) | 350, 640, 1003, 1588, 1693, 1734 |
| BstH2I | RGCGCY | 1 cut(s) | 1548 |
| BstHHI | GCGC | 4 cut(s) | 226, 534, 1328, 1547 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 298, 796 |
| BstNI | CCWGG | 1 cut(s) | 32 |
| BstNSI | RCATGY | 1 cut(s) | 79 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1563 |
| BstSCI | CCNGG | 2 cut(s) | 30, 734 |
| BstSLI | GKGCMC | 2 cut(s) | 69, 1095 |
| BstV1I | GCAGC | 7 cut(s) | 516, 844, 847, 893, 1148, 1452, 1696 |
| BstV2I | GAAGAC | 2 cut(s) | 326, 1001 |
| BstX2I | RGATCY | 7 cut(s) | 276, 649, 724, 781, 1122, 1310, 1483 |
| BstYI | RGATCY | 7 cut(s) | 276, 649, 724, 781, 1122, 1310, 1483 |
| Bsu15I | ATCGAT | 1 cut(s) | 258 |
| BsuRI | GGCC | 1 cut(s) | 1093 |
| BsuTUI | ATCGAT | 1 cut(s) | 258 |
| BtgZI | GCGATG | 1 cut(s) | 1257 |
| BtsCI | GGATG | 6 cut(s) | 350, 640, 1003, 1588, 1693, 1734 |
| BtsIMutI | CAGTG | 6 cut(s) | 792, 871, 1025, 1321, 1606, 1660 |
| BveI | ACCTGC | 1 cut(s) | 329 |
| Cac8I | GCNNGC | 2 cut(s) | 801, 1689 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1253, 1706 |
| CciI | TCATGA | 1 cut(s) | 933 |
| CfoI | GCGC | 4 cut(s) | 226, 534, 1328, 1547 |
| Cfr13I | GGNCC | 6 cut(s) | 349, 705, 1091, 1092, 1627, 1643 |
| ClaI | ATCGAT | 1 cut(s) | 258 |
| Csp6I | GTAC | 8 cut(s) | 18, 79, 135, 442, 580, 1168, 1412, 1750 |
| CviAII | CATG | 8 cut(s) | 76, 132, 247, 445, 546, 934, 1165, 1680 |
| CviQI | GTAC | 8 cut(s) | 18, 79, 135, 442, 580, 1168, 1412, 1750 |
| DdeI | CTNAG | 4 cut(s) | 1017, 1154, 1406, 1598 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 754 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1649 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 754 |
| Eam1104I | CTCTTC | 3 cut(s) | 456, 570, 1704 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1649 |
| EarI | CTCTTC | 3 cut(s) | 456, 570, 1704 |
| Eco130I | CCWWGG | 1 cut(s) | 1561 |
| Eco24I | GRGCYC | 1 cut(s) | 1095 |
| Eco32I | GATATC | 1 cut(s) | 939 |
| Eco47I | GGWCC | 4 cut(s) | 349, 705, 1627, 1643 |
| Eco57I | CTGAAG | 4 cut(s) | 942, 967, 1683, 1728 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1092 |
| EcoRI | GAATTC | 1 cut(s) | 597 |
| EcoRII | CCWGG | 1 cut(s) | 30 |
| EcoRV | GATATC | 1 cut(s) | 939 |
| EcoT14I | CCWWGG | 1 cut(s) | 1561 |
| EcoT22I | ATGCAT | 1 cut(s) | 1276 |
| EcoT38I | GRGCYC | 1 cut(s) | 1095 |
| ErhI | CCWWGG | 1 cut(s) | 1561 |
| FaeI | CATG | 8 cut(s) | 79, 135, 250, 448, 549, 937, 1168, 1683 |
| FaqI | GGGAC | 2 cut(s) | 257, 1717 |
| FatI | CATG | 8 cut(s) | 75, 131, 246, 444, 545, 933, 1164, 1679 |
| Fnu4HI | GCNGC | 7 cut(s) | 530, 858, 861, 882, 1137, 1466, 1685 |
| FokI | GGATG | 6 cut(s) | 357, 647, 1010, 1595, 1680, 1741 |
| FriOI | GRGCYC | 1 cut(s) | 1095 |
| Fsp4HI | GCNGC | 7 cut(s) | 530, 858, 861, 882, 1137, 1466, 1685 |
| FspBI | CTAG | 4 cut(s) | 62, 836, 1562, 1753 |
| FspI | TGCGCA | 1 cut(s) | 533 |
| GlaI | GCGC | 4 cut(s) | 225, 533, 1327, 1546 |
| GluI | GCNGC | 7 cut(s) | 530, 858, 861, 882, 1137, 1466, 1685 |
| GsaI | CCCAGC | 1 cut(s) | 296 |
| HaeII | RGCGCY | 1 cut(s) | 1548 |
| HaeIII | GGCC | 1 cut(s) | 1093 |
| HapII | CCGG | 2 cut(s) | 626, 735 |
| HhaI | GCGC | 4 cut(s) | 226, 534, 1328, 1547 |
| Hin1II | CATG | 8 cut(s) | 79, 135, 250, 448, 549, 937, 1168, 1683 |
| Hin6I | GCGC | 4 cut(s) | 224, 532, 1326, 1545 |
| HinP1I | GCGC | 4 cut(s) | 224, 532, 1326, 1545 |
| HindIII | AAGCTT | 1 cut(s) | 359 |
| HinfI | GANTC | 4 cut(s) | 748, 828, 1061, 1397 |
| HpaII | CCGG | 2 cut(s) | 626, 735 |
| HphI | GGTGA | 2 cut(s) | 750, 1042 |
| Hpy166II | GTNNAC | 3 cut(s) | 67, 562, 1025 |
| Hpy188I | TCNGA | 4 cut(s) | 96, 1036, 1409, 1480 |
| Hpy188III | TCNNGA | 4 cut(s) | 199, 934, 1201, 1625 |
| Hpy8I | GTNNAC | 3 cut(s) | 67, 562, 1025 |
| HpyAV | CCTTC | 4 cut(s) | 639, 871, 1113, 1707 |
| HpyCH4III | ACNGT | 6 cut(s) | 584, 665, 975, 1255, 1365, 1456 |
| HpyCH4IV | ACGT | 1 cut(s) | 568 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 298, 796 |
| HpyF3I | CTNAG | 4 cut(s) | 1017, 1154, 1406, 1598 |
| HpySE526I | ACGT | 1 cut(s) | 568 |
| Hsp92II | CATG | 8 cut(s) | 79, 135, 250, 448, 549, 937, 1168, 1683 |
| HspAI | GCGC | 4 cut(s) | 224, 532, 1326, 1545 |
| LmnI | GCTCC | 2 cut(s) | 368, 917 |
| Lsp1109I | GCAGC | 7 cut(s) | 516, 844, 847, 893, 1148, 1452, 1696 |
| LweI | GCATC | 3 cut(s) | 625, 726, 1234 |
| MaeI | CTAG | 4 cut(s) | 62, 836, 1562, 1753 |
| MaeII | ACGT | 1 cut(s) | 568 |
| MaeIII | GTNAC | 4 cut(s) | 756, 1048, 1070, 1384 |
| MfeI | CAATTG | 1 cut(s) | 693 |
| MflI | RGATCY | 7 cut(s) | 276, 649, 724, 781, 1122, 1310, 1483 |
| MhlI | GDGCHC | 2 cut(s) | 69, 1095 |
| MlyI | GAGTC | 2 cut(s) | 742, 1070 |
| Mph1103I | ATGCAT | 1 cut(s) | 1276 |
| MroXI | GAANNNNTTC | 3 cut(s) | 465, 1191, 1739 |
| MseI | TTAA | 6 cut(s) | 177, 1227, 1440, 1569, 1617, 1632 |
| MslI | CAYNNNNRTG | 1 cut(s) | 74 |
| MspCI | CTTAAG | 1 cut(s) | 1226 |
| MspI | CCGG | 2 cut(s) | 626, 735 |
| MspR9I | CCNGG | 2 cut(s) | 32, 736 |
| MunI | CAATTG | 1 cut(s) | 693 |
| Mva1269I | GAATGC | 2 cut(s) | 380, 1721 |
| MvaI | CCWGG | 1 cut(s) | 32 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 298, 796 |
| NciI | CCSGG | 1 cut(s) | 736 |
| NlaIII | CATG | 8 cut(s) | 79, 135, 250, 448, 549, 937, 1168, 1683 |
| NlaIV | GGNNCC | 5 cut(s) | 350, 783, 1093, 1312, 1357 |
| NmuCI | GTSAC | 2 cut(s) | 756, 1048 |
| NsbI | TGCGCA | 1 cut(s) | 533 |
| NsiI | ATGCAT | 1 cut(s) | 1276 |
| NspI | RCATGY | 1 cut(s) | 79 |
| NspV | TTCGAA | 1 cut(s) | 487 |
| PagI | TCATGA | 1 cut(s) | 933 |
| PaqCI | CACCTGC | 1 cut(s) | 329 |
| PciI | ACATGT | 1 cut(s) | 75 |
| PctI | GAATGC | 2 cut(s) | 380, 1721 |
| PdmI | GAANNNNTTC | 3 cut(s) | 465, 1191, 1739 |
| PfeI | GAWTC | 2 cut(s) | 828, 1397 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 791 |
| PfoI | TCCNGGA | 1 cut(s) | 734 |
| PkrI | GCNGC | 7 cut(s) | 531, 859, 862, 883, 1138, 1467, 1686 |
| PleI | GAGTC | 2 cut(s) | 742, 1069 |
| PpsI | GAGTC | 2 cut(s) | 742, 1069 |
| PscI | ACATGT | 1 cut(s) | 75 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1563 |
| PsiI | TTATAA | 2 cut(s) | 312, 1259 |
| Psp6I | CCWGG | 1 cut(s) | 30 |
| PspFI | CCCAGC | 1 cut(s) | 292 |
| PspGI | CCWGG | 1 cut(s) | 30 |
| PspN4I | GGNNCC | 5 cut(s) | 350, 783, 1093, 1312, 1357 |
| PspOMI | GGGCCC | 1 cut(s) | 1091 |
| PspPI | GGNCC | 6 cut(s) | 349, 705, 1091, 1092, 1627, 1643 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1253, 1706 |
| PsuI | RGATCY | 7 cut(s) | 276, 649, 724, 781, 1122, 1310, 1483 |
| RsaI | GTAC | 8 cut(s) | 19, 80, 136, 443, 581, 1169, 1413, 1751 |
| RsaNI | GTAC | 8 cut(s) | 18, 79, 135, 442, 580, 1168, 1412, 1750 |
| RseI | CAYNNNNRTG | 1 cut(s) | 74 |
| SaqAI | TTAA | 6 cut(s) | 177, 1227, 1440, 1569, 1617, 1632 |
| SatI | GCNGC | 7 cut(s) | 530, 858, 861, 882, 1137, 1466, 1685 |
| Sau96I | GGNCC | 6 cut(s) | 349, 705, 1091, 1092, 1627, 1643 |
| ScaI | AGTACT | 2 cut(s) | 1413, 1751 |
| SchI | GAGTC | 2 cut(s) | 742, 1070 |
| ScrFI | CCNGG | 2 cut(s) | 32, 736 |
| SduI | GDGCHC | 2 cut(s) | 69, 1095 |
| SfaNI | GCATC | 3 cut(s) | 625, 726, 1234 |
| SfuI | TTCGAA | 1 cut(s) | 487 |
| SinI | GGWCC | 4 cut(s) | 349, 705, 1627, 1643 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 74 |
| SmlI | CTYRAG | 1 cut(s) | 1226 |
| SmoI | CTYRAG | 1 cut(s) | 1226 |
| SpeI | ACTAGT | 1 cut(s) | 835 |
| SsiI | CCGC | 2 cut(s) | 1028, 1301 |
| SspI | AATATT | 1 cut(s) | 288 |
| SspMI | CTAG | 4 cut(s) | 62, 836, 1562, 1753 |
| StyD4I | CCNGG | 2 cut(s) | 30, 734 |
| StyI | CCWWGG | 1 cut(s) | 1561 |
| TaaI | ACNGT | 6 cut(s) | 584, 665, 975, 1255, 1365, 1456 |
| TaiI | ACGT | 1 cut(s) | 571 |
| TaqI | TCGA | 4 cut(s) | 258, 469, 487, 1516 |
| TatI | WGTACW | 8 cut(s) | 17, 78, 134, 441, 579, 1167, 1411, 1749 |
| TfiI | GAWTC | 2 cut(s) | 828, 1397 |
| Tru1I | TTAA | 6 cut(s) | 177, 1227, 1440, 1569, 1617, 1632 |
| Tru9I | TTAA | 6 cut(s) | 177, 1227, 1440, 1569, 1617, 1632 |
| TscAI | CASTG | 6 cut(s) | 792, 871, 1025, 1321, 1606, 1660 |
| TseFI | GTSAC | 2 cut(s) | 756, 1048 |
| TseI | GCWGC | 7 cut(s) | 529, 857, 860, 881, 1136, 1465, 1684 |
| Tsp45I | GTSAC | 2 cut(s) | 756, 1048 |
| TspDTI | ATGAA | 9 cut(s) | 120, 138, 276, 461, 885, 1001, 1125, 1198, 1745 |
| TspGWI | ACGGA | 1 cut(s) | 341 |
| TspRI | CASTG | 6 cut(s) | 792, 871, 1025, 1321, 1606, 1660 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 791 |
| Vha464I | CTTAAG | 1 cut(s) | 1226 |
| VneI | GTGCAC | 1 cut(s) | 65 |
| VpaK11BI | GGWCC | 4 cut(s) | 349, 705, 1627, 1643 |
| XapI | RAATTY | 5 cut(s) | 194, 202, 597, 1191, 1204 |
| XceI | RCATGY | 1 cut(s) | 79 |
| XmaJI | CCTAGG | 1 cut(s) | 1561 |
| XmnI | GAANNNNTTC | 3 cut(s) | 465, 1191, 1739 |
| XspI | CTAG | 4 cut(s) | 62, 836, 1562, 1753 |
| ZrmI | AGTACT | 2 cut(s) | 1413, 1751 |
| Zsp2I | ATGCAT | 1 cut(s) | 1276 |