Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000288

Physical Location & Seq

Genomic Coordinates Forward (+)

63072678 .. 63078573

Gene Structure 5896 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00383500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGTTCAGCTTGAATTTTCACTCTTCCATTTGTCAATTCTGCTTTTGGGTTTCTCAAGTTTGGGGTCATATAGATTTGGGCATGGGGTTTTTGTTTACGCAGAGGGCTCTGCTTCTAGAGAAAGTGCTTCTCCTCCGCACTGTAGACCACGCATTTCCTCAGGTATTTCGAAATAGAGTTACTTGGCAAGCAAGAAACACCAAGGCAGCAAGGTTGAGAGTCCCATTTTGTGTAGGATTTCCTTTTCGGTTTTCTCTGAAATTGTATACAACAGGGCAGAAGGGGACTCTGGAAAGGACCCGATTATCAGGCTCGGAAGGAGCAACAGTGGTGATGTCCACGCCAACTGTACATGTGAGAGATACCATTGAACTTGATGAAACTGAAGAGAAGATCTTTGAGAGGCTGCTTGGAACGCTCGACCATTATGGACTTAAGACTGAGCTTCGTGTCGCAGGTGGATGGGTCCGTGATAAGCTTCTGGGAAAAGAGTGCAAGGACATCGACATTGCTTTGGAAAATATGATGGGCAGCAAATTTGTTGAGAAGGTGAGAGACTACTTGTTGTCTGTGGGGAAGAGCAATCCTGATCAATCAAAACATTTGGAAACGGCGAGGATGCGCATCTTTAATATATGGGTTGATTTTGTGAACTTACGTTGTGAAGAGTACAGTGATGATAGCCGCATTCCTACTATGCAAAAGTATGGCACACCAGAACAGGATGCACTGAGAAGGGATCTAACAATAAACAGCTTATTTTACAACATCAATACCAAATCCGTTGAAGATTGGACTAATAGAGGAATTGAAGATCTAAAATGTGGGAAAATTGTGACTCCTTTACCACCAAAGGATACATTTATGGAGGATCCGCTACGAGTTCTTCGAGCTATCCGCTTTGCCGCAAGGTTCAGATTCATACTCGATGAACAACTAAAGGAAGCTGCTGCCTGTGATGAAGTGAAAGCTGCTCTATCAGCTAAAATTAGCAGAGAGCGAATTGGAGCTGAAATTGATCTGATGATTTCTGGAAACCAACCTGTCCAAGCTATGACCTATATATGTGACTTGAAGTTATTTTGGGTTGTCTTCAGTCTTCATCCGCAGTGTGAGCCATCAGAAGGATGCGACAGCGATTGTGTCACTTACTTGGATTGTACATGGAATCTTATTCAATTAGTGGGGCACTCTACCTTCAATGACGAACAAAGAAGGCTCTCCTTTTATGCTGCAATGTTCCTTCCACTTAGGAAGACCATGTATAAAGATAGGAAAGCAAAAGATGTTCCTGTCGTGAATTATATTTTCAGAGACTCCCTTAAGCAAAGAGTCAGCGATGCTGAAACTGTTGTTAATTTACACAATGCATTGGAGAAGTTTTTGTCTTTGCTTCCTCACTTTGTACCAAATGGGGATGCAAAACTCGCTGAAGTTGATTTGGGAAGAGAATATGCTGATGTCCCTCTTACTTCGAAAGAATCAAAACTCCGAGTATTAACAGGGTTTCTTTTACGAGAAATTAAAGATTTTTGGCGAGTTGCTTTGCTGATGTCTATACTGTTATATCCCACCGACGTCTTAAACGAGAATTTCAAACCAGAAGATCGCAGAGCTTTGTTTGTAGAAGCTGAAAAGGCCATAAATAATCTAGGTCTAGATGGAGTCTGGGATGGAAAGCCATTACTTAATGGAAAGGAGATCATGGATGCTTTACAGCTTAAATCTGGTGGACCAGTTCAAAGGAAGCTACTGGCATGGCAGCTTGCTCATCCTTCGAGGACTGCAGAGGAATGCCGCGAATGGCTGAAGGAAACACACTCTTCAAGTACTAGATCTGCTGGATATGTGGAGGAATTGAATGGACCCAACAACAAGAAAAGTAAGACTGAAGATTGTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001680 GO:0003674 GO:0003824 GO:0004652 GO:0004810 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031974 GO:0034470 GO:0034641 GO:0034660 GO:0042780 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0052928 GO:0052929 GO:0070013 GO:0070566 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1990817

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

634

Amino Acids

72.67

Weight (kDa)

7.51

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	149 - 278	8.5e-27	Poly A polymerase head domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22660 AT1G22660 AT1G22660 AT1G22660 AT1G22660
fragaria_vesca	FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440
malus_domestica	MD05G1045700.v1.1 MD10G1052700.v1.1
prunus_persica	Prupe.6G147900_v2.0.a1 Prupe.6G147900_v2.0.a1
pyrus_communis	pycom05g03810 pycom10g03770
rosa_chinensis	RchiOBHm_Chr3g0457671 RchiOBHm_Chr4g0411681 RchiOBHm_Chr4g0411871 RchiOBHm_Chr4g0412011 RchiOBHm_Chr4g0442691 RchiOBHm_Chr5g0054011 RchiOBHm_Chr7g0192731 RchiOBHm_Chr7g0217301 RchiOBHm_Chr7g0217311
rosa_laevigata	RLG00000002496 RLG00000002497 RLG00000004333 RLG00000005141 RLG00000005991 RLG00000008329 RLG00000008334
rosa_multiflora	Rmu_co8052866.1_g000001 Rmu_sc0000124.1_g000041 Rmu_sc0000711.1_g000018 Rmu_sc0000711.1_g000026 Rmu_sc0000711.1_g000049 Rmu_sc0001260.1_g000024 Rmu_sc0002040.1_g000016 Rmu_sc0003311.1_g000009 Rmu_sc0003541.1_g000049 Rmu_sc0007633.1_g000011 Rmu_sc0007784.1_g000001 Rmu_sc0007843.1_g000002 Rmu_sc0018873.1_g000007 Rmu_sc0037239.1_g000001 Rmu_ssc0000204.1_g000025
rosa_roxburghii	Rroxscaffold_1G00010150 Rroxscaffold_2G00085070 Rroxscaffold_3G00237950 Rroxscaffold_3G00238000 Rroxscaffold_3G00238060 Rroxscaffold_3G00242460 Rroxscaffold_5G00356230 Rroxscaffold_5G00356320 Rroxscaffold_5G00357990 Rroxscaffold_5G00383500
rosa_rugosa	Rorug04G0107400 Rorug04G0107400 Rorug04G0342400.1 Rorug04G0342500.1 Rorug04G0342600.1 Rorug06G0053100 Rorug06G0099700 Rorug07G0004300 Rorug07G0167800 Rorug07G0167900
rosa_samantha	Rh2CG570300 Rh2DG609200 Rh4AG068500 Rh4AG169600 Rh4AG169900 Rh4AG170200 Rh4AG170600 Rh4AG202600 Rh4AG394800 Rh4BG066700 Rh4BG066800 Rh4BG166500 Rh4BG166600 Rh4BG166700 Rh4BG167000 Rh4BG167300 Rh4BG168500 Rh4BG169200 Rh4BG208600 Rh4BG407700 Rh4CG074000 Rh4CG181100 Rh4CG181200 Rh4CG181700 Rh4CG423100 Rh4DG163900 Rh4DG164400 Rh4DG165100 Rh4DG165200 Rh4DG200000 Rh4DG401800 Rh6BG194500 Rh6CG100200 Rh7AG129300 Rh7AG307100 Rh7BG130700 Rh7BG298000 Rh7CG134100 Rh7DG131500 Rh7DG306700
rosa_wichuraiana	Rw0G007750 Rw4G014080 Rw4G014120 Rw4G014180 Rw4G017150 Rw4G034120 Rw7G011060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	446
AatII	GACGTC	1 cut(s)	1581
Acc16I	TGCGCA	1 cut(s)	623
Acc36I	ACCTGC	1 cut(s)	446
AccI	GTMKAC	2 cut(s)	144, 266
AccII	CGCG	1 cut(s)	1800
AciI	CCGC	7 cut(s)	136, 685, 875, 898, 906, 1106, 1798
AclWI	GGATC	3 cut(s)	747, 866, 879
AcsI	RAATTY	3 cut(s)	13, 536, 1591
AcuI	CTGAAG	4 cut(s)	405, 1078, 1452, 1829
AcyI	GRCGYC	1 cut(s)	1578
AfaI	GTAC	5 cut(s)	351, 671, 1162, 1407, 1831
AfiI	CCNNNNNNNGG	1 cut(s)	1124
AflII	CTTAAG	2 cut(s)	434, 1322
AflIII	ACRYGT	1 cut(s)	352
Alw26I	GTCTC	2 cut(s)	549, 1308
AlwI	GGATC	3 cut(s)	747, 866, 879
AoxI	GGCC	1 cut(s)	1638
ApeKI	GCWGC	8 cut(s)	206, 406, 531, 947, 950, 971, 1232, 1762
ApoI	RAATTY	3 cut(s)	13, 536, 1591
AspLEI	GCGC	1 cut(s)	624
AspS9I	GGNCC	4 cut(s)	297, 466, 1733, 1865
AsuHPI	GGTGA	2 cut(s)	343, 562
AsuII	TTCGAA	2 cut(s)	169, 1475
AvaII	GGWCC	4 cut(s)	297, 466, 1733, 1865
AxyI	CCTNAGG	1 cut(s)	159
BaeGI	GKGCMC	1 cut(s)	1191
BamHI	GGATCC	1 cut(s)	871
BanII	GRGCYC	1 cut(s)	109
BbsI	GAAGAC	3 cut(s)	1084, 1091, 1262
BbvI	GCAGC	8 cut(s)	218, 393, 543, 934, 937, 958, 1219, 1774
BccI	CCATC	5 cut(s)	456, 520, 1126, 1655, 1667
BceAI	ACGGC	1 cut(s)	627
BcgI	CGANNNNNNTGC	2 cut(s)	484, 518
BciVI	GTATCC	1 cut(s)	850
BclI	TGATCA	1 cut(s)	589
BcoDI	GTCTC	2 cut(s)	549, 1308
BfaI	CTAG	4 cut(s)	116, 1652, 1658, 1833
BfmI	CTRYAG	2 cut(s)	141, 1785
BfrI	CTTAAG	2 cut(s)	434, 1322
BfuAI	ACCTGC	1 cut(s)	446
BfuI	GTATCC	1 cut(s)	850
BglII	AGATCT	3 cut(s)	393, 814, 1835
BmcAI	AGTACT	1 cut(s)	1831
Bme18I	GGWCC	4 cut(s)	297, 466, 1733, 1865
BmgT120I	GGNCC	4 cut(s)	297, 466, 1733, 1865
BmiI	GGNNCC	4 cut(s)	299, 467, 873, 1867
BmsI	GCATC	7 cut(s)	609, 633, 715, 1118, 1330, 1408, 1699
BpiI	GAAGAC	3 cut(s)	1084, 1091, 1262
Bpu14I	TTCGAA	2 cut(s)	169, 1475
BpuEI	CTTGAG	1 cut(s)	39
BsaBI	GATNNNNATC	1 cut(s)	623
BsaHI	GRCGYC	1 cut(s)	1578
BsaJI	CCNNGG	1 cut(s)	201
BsaXI	ACNNNNNCTCC	2 cut(s)	312, 342
Bsc4I	CCNNNNNNNGG	1 cut(s)	1124
Bse1I	ACTGG	2 cut(s)	1736, 1758
Bse21I	CCTNAGG	1 cut(s)	159
Bse3DI	GCAATG	2 cut(s)	507, 1242
Bse8I	GATNNNNATC	1 cut(s)	623
BseDI	CCNNGG	1 cut(s)	201
BseGI	GGATG	9 cut(s)	467, 624, 730, 1102, 1133, 1423, 1678, 1714, 1771
BseJI	GATNNNNATC	1 cut(s)	623
BseLI	CCNNNNNNNGG	1 cut(s)	1124
BseMI	GCAATG	2 cut(s)	507, 1242
BseMII	CTCAG	3 cut(s)	173, 432, 722
BseNI	ACTGG	2 cut(s)	1736, 1758
BseRI	GAGGAG	1 cut(s)	122
BseSI	GKGCMC	1 cut(s)	1191
BseXI	GCAGC	8 cut(s)	218, 393, 543, 934, 937, 958, 1219, 1774
Bsh1236I	CGCG	1 cut(s)	1800
BshFI	GGCC	1 cut(s)	1640
BslFI	GGGAC	3 cut(s)	206, 298, 1448
BslI	CCNNNNNNNGG	1 cut(s)	1124
BsmAI	GTCTC	2 cut(s)	549, 1308
BsmFI	GGGAC	3 cut(s)	206, 298, 1448
BsmI	GAATGC	2 cut(s)	687, 1799
BsnI	GGCC	1 cut(s)	1640
Bsp119I	TTCGAA	2 cut(s)	169, 1475
Bsp1286I	GDGCHC	2 cut(s)	109, 1191
Bsp1407I	TGTACA	2 cut(s)	349, 1160
Bsp143I	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
BspACI	CCGC	7 cut(s)	136, 685, 875, 898, 906, 1106, 1798
BspANI	GGCC	1 cut(s)	1640
BspCNI	CTCAG	3 cut(s)	172, 433, 723
BspFNI	CGCG	1 cut(s)	1800
BspLI	GGNNCC	4 cut(s)	299, 467, 873, 1867
BspMAI	CTGCAG	1 cut(s)	1789
BspMI	ACCTGC	1 cut(s)	446
BspPI	GGATC	3 cut(s)	747, 866, 879
BspQI	GCTCTTC	1 cut(s)	572
BspT104I	TTCGAA	2 cut(s)	169, 1475
BspTI	CTTAAG	2 cut(s)	434, 1322
BsrDI	GCAATG	2 cut(s)	507, 1242
BsrGI	TGTACA	2 cut(s)	349, 1160
BsrI	ACTGG	2 cut(s)	1736, 1758
BssECI	CCNNGG	1 cut(s)	201
BssMI	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
BssNAI	GTATAC	1 cut(s)	267
BssNI	GRCGYC	1 cut(s)	1578
BssT1I	CCWWGG	1 cut(s)	201
Bst1107I	GTATAC	1 cut(s)	267
Bst4CI	ACNGT	6 cut(s)	142, 328, 349, 674, 1351, 1563
Bst6I	CTCTTC	6 cut(s)	28, 381, 572, 660, 1441, 1828
BstACI	GRCGYC	1 cut(s)	1578
BstAFI	CTTAAG	2 cut(s)	434, 1322
BstAUI	TGTACA	2 cut(s)	349, 1160
BstBI	TTCGAA	2 cut(s)	169, 1475
BstC8I	GCNNGC	2 cut(s)	189, 1767
BstDEI	CTNAG	4 cut(s)	159, 441, 731, 1250
BstF5I	GGATG	9 cut(s)	467, 624, 730, 1102, 1133, 1423, 1678, 1714, 1771
BstFNI	CGCG	1 cut(s)	1800
BstHHI	GCGC	1 cut(s)	624
BstKTI	GATC	9 cut(s)	396, 592, 742, 817, 874, 1021, 1609, 1704, 1838
BstMAI	GTCTC	2 cut(s)	549, 1308
BstMBI	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
BstMWI	GCNNNNNNNGC	5 cut(s)	415, 980, 1114, 1427, 1637
BstNSI	RCATGY	1 cut(s)	356
BstSFI	CTRYAG	2 cut(s)	141, 1785
BstSLI	GKGCMC	1 cut(s)	1191
BstUI	CGCG	1 cut(s)	1800
BstV1I	GCAGC	8 cut(s)	218, 393, 543, 934, 937, 958, 1219, 1774
BstV2I	GAAGAC	3 cut(s)	1084, 1091, 1262
BstX2I	RGATCY	5 cut(s)	393, 739, 814, 871, 1835
BstYI	RGATCY	5 cut(s)	393, 739, 814, 871, 1835
BstZ17I	GTATAC	1 cut(s)	267
Bsu36I	CCTNAGG	1 cut(s)	159
BsuI	GTATCC	1 cut(s)	850
BsuRI	GGCC	1 cut(s)	1640
BtgZI	GCGATG	1 cut(s)	1353
BtsCI	GGATG	9 cut(s)	467, 624, 730, 1102, 1133, 1423, 1678, 1714, 1771
BtsI	GCAGTG	1 cut(s)	1115
BtsIMutI	CAGTG	5 cut(s)	138, 333, 679, 728, 1115
BveI	ACCTGC	1 cut(s)	446
Cac8I	GCNNGC	2 cut(s)	189, 1767
CfoI	GCGC	1 cut(s)	624
Cfr13I	GGNCC	4 cut(s)	297, 466, 1733, 1865
Csp6I	GTAC	5 cut(s)	350, 670, 1161, 1406, 1830
CviAII	CATG	6 cut(s)	82, 353, 1164, 1261, 1705, 1758
CviQI	GTAC	5 cut(s)	350, 670, 1161, 1406, 1830
DdeI	CTNAG	4 cut(s)	159, 441, 731, 1250
DpnI	GATC	9 cut(s)	395, 591, 741, 816, 873, 1020, 1608, 1703, 1837
DpnII	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
Eam1104I	CTCTTC	6 cut(s)	28, 381, 572, 660, 1441, 1828
EarI	CTCTTC	6 cut(s)	28, 381, 572, 660, 1441, 1828
Eco130I	CCWWGG	1 cut(s)	201
Eco24I	GRGCYC	1 cut(s)	109
Eco47I	GGWCC	4 cut(s)	297, 466, 1733, 1865
Eco57I	CTGAAG	4 cut(s)	405, 1078, 1452, 1829
Eco81I	CCTNAGG	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	297
EcoT14I	CCWWGG	1 cut(s)	201
EcoT22I	ATGCAT	1 cut(s)	1372
EcoT38I	GRGCYC	1 cut(s)	109
ErhI	CCWWGG	1 cut(s)	201
FaeI	CATG	6 cut(s)	85, 356, 1167, 1264, 1708, 1761
FaqI	GGGAC	3 cut(s)	206, 298, 1448
FatI	CATG	6 cut(s)	81, 352, 1163, 1260, 1704, 1757
FbaI	TGATCA	1 cut(s)	589
FblI	GTMKAC	2 cut(s)	144, 266
FokI	GGATG	9 cut(s)	474, 631, 737, 1089, 1140, 1430, 1685, 1721, 1758
FriOI	GRGCYC	1 cut(s)	109
FspAI	RTGCGCAY	1 cut(s)	623
FspBI	CTAG	4 cut(s)	116, 1652, 1658, 1833
FspI	TGCGCA	1 cut(s)	623
GlaI	GCGC	1 cut(s)	623
HaeIII	GGCC	1 cut(s)	1640
HhaI	GCGC	1 cut(s)	624
Hin1I	GRCGYC	1 cut(s)	1578
Hin1II	CATG	6 cut(s)	85, 356, 1167, 1264, 1708, 1761
Hin6I	GCGC	1 cut(s)	622
HinP1I	GCGC	1 cut(s)	622
HindIII	AAGCTT	1 cut(s)	476
HinfI	GANTC	9 cut(s)	219, 286, 838, 918, 1168, 1316, 1332, 1481, 1665
HphI	GGTGA	2 cut(s)	343, 562
Hpy166II	GTNNAC	6 cut(s)	96, 145, 267, 339, 652, 1733
Hpy188I	TCNGA	7 cut(s)	258, 316, 917, 1023, 1123, 1313, 1493
Hpy188III	TCNNGA	6 cut(s)	116, 290, 587, 1032, 1297, 1658
Hpy8I	GTNNAC	6 cut(s)	96, 145, 267, 339, 652, 1733
Hpy99I	CGWCG	1 cut(s)	1580
HpyCH4III	ACNGT	6 cut(s)	142, 328, 349, 674, 1351, 1563
HpyCH4IV	ACGT	2 cut(s)	658, 1578
HpyCH4V	TGCA	7 cut(s)	495, 700, 728, 1235, 1370, 1421, 1787
HpyF10VI	GCNNNNNNNGC	5 cut(s)	415, 980, 1114, 1427, 1637
HpyF3I	CTNAG	4 cut(s)	159, 441, 731, 1250
HpySE526I	ACGT	2 cut(s)	658, 1578
Hsp92I	GRCGYC	1 cut(s)	1578
Hsp92II	CATG	6 cut(s)	85, 356, 1167, 1264, 1708, 1761
HspAI	GCGC	1 cut(s)	622
Ksp22I	TGATCA	1 cut(s)	589
Kzo9I	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
LguI	GCTCTTC	1 cut(s)	572
LmnI	GCTCC	2 cut(s)	320, 1007
Lsp1109I	GCAGC	8 cut(s)	218, 393, 543, 934, 937, 958, 1219, 1774
LweI	GCATC	7 cut(s)	609, 633, 715, 1118, 1330, 1408, 1699
MaeI	CTAG	4 cut(s)	116, 1652, 1658, 1833
MaeII	ACGT	2 cut(s)	658, 1578
MaeIII	GTNAC	5 cut(s)	178, 835, 1067, 1144, 1898
MalI	GATC	9 cut(s)	395, 591, 741, 816, 873, 1020, 1608, 1703, 1837
MboI	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
MflI	RGATCY	5 cut(s)	393, 739, 814, 871, 1835
MhlI	GDGCHC	2 cut(s)	109, 1191
MlyI	GAGTC	6 cut(s)	228, 280, 832, 1310, 1341, 1674
Mph1103I	ATGCAT	1 cut(s)	1372
MseI	TTAA	9 cut(s)	435, 630, 1323, 1356, 1499, 1524, 1583, 1689, 1722
MspCI	CTTAAG	2 cut(s)	434, 1322
Mva1269I	GAATGC	2 cut(s)	687, 1799
MvnI	CGCG	1 cut(s)	1800
MwoI	GCNNNNNNNGC	5 cut(s)	415, 980, 1114, 1427, 1637
NdeII	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
NlaIII	CATG	6 cut(s)	85, 356, 1167, 1264, 1708, 1761
NlaIV	GGNNCC	4 cut(s)	299, 467, 873, 1867
NmuCI	GTSAC	3 cut(s)	835, 1067, 1144
NsbI	TGCGCA	1 cut(s)	623
NsiI	ATGCAT	1 cut(s)	1372
NspI	RCATGY	1 cut(s)	356
NspV	TTCGAA	2 cut(s)	169, 1475
PaqCI	CACCTGC	1 cut(s)	446
PciI	ACATGT	1 cut(s)	352
PciSI	GCTCTTC	1 cut(s)	572
PcsI	WCGNNNNNNNCGW	2 cut(s)	886, 1584
PctI	GAATGC	2 cut(s)	687, 1799
PfeI	GAWTC	3 cut(s)	918, 1168, 1481
PleI	GAGTC	6 cut(s)	227, 280, 832, 1310, 1340, 1673
PpsI	GAGTC	6 cut(s)	227, 280, 832, 1310, 1340, 1673
PpuMI	RGGWCCY	1 cut(s)	297
PscI	ACATGT	1 cut(s)	352
Psp5II	RGGWCCY	1 cut(s)	297
PspN4I	GGNNCC	4 cut(s)	299, 467, 873, 1867
PspPI	GGNCC	4 cut(s)	297, 466, 1733, 1865
PspPPI	RGGWCCY	1 cut(s)	297
PstI	CTGCAG	1 cut(s)	1789
PsuI	RGATCY	5 cut(s)	393, 739, 814, 871, 1835
RsaI	GTAC	5 cut(s)	351, 671, 1162, 1407, 1831
RsaNI	GTAC	5 cut(s)	350, 670, 1161, 1406, 1830
SapI	GCTCTTC	1 cut(s)	572
SaqAI	TTAA	9 cut(s)	435, 630, 1323, 1356, 1499, 1524, 1583, 1689, 1722
Sau3AI	GATC	9 cut(s)	393, 589, 739, 814, 871, 1018, 1606, 1701, 1835
Sau96I	GGNCC	4 cut(s)	297, 466, 1733, 1865
ScaI	AGTACT	1 cut(s)	1831
SchI	GAGTC	6 cut(s)	228, 280, 832, 1310, 1341, 1674
SduI	GDGCHC	2 cut(s)	109, 1191
SfaNI	GCATC	7 cut(s)	609, 633, 715, 1118, 1330, 1408, 1699
SfcI	CTRYAG	2 cut(s)	141, 1785
SfuI	TTCGAA	2 cut(s)	169, 1475
SinI	GGWCC	4 cut(s)	297, 466, 1733, 1865
SmlI	CTYRAG	3 cut(s)	54, 434, 1322
SmoI	CTYRAG	3 cut(s)	54, 434, 1322
SsiI	CCGC	7 cut(s)	136, 685, 875, 898, 906, 1106, 1798
SspMI	CTAG	4 cut(s)	116, 1652, 1658, 1833
StyI	CCWWGG	1 cut(s)	201
TaaI	ACNGT	6 cut(s)	142, 328, 349, 674, 1351, 1563
TaiI	ACGT	2 cut(s)	661, 1581
TaqI	TCGA	7 cut(s)	169, 420, 504, 889, 927, 1475, 1778
TatI	WGTACW	4 cut(s)	349, 669, 1160, 1829
TauI	GCSGC	3 cut(s)	687, 908, 1800
TfiI	GAWTC	3 cut(s)	918, 1168, 1481
Tru1I	TTAA	9 cut(s)	435, 630, 1323, 1356, 1499, 1524, 1583, 1689, 1722
Tru9I	TTAA	9 cut(s)	435, 630, 1323, 1356, 1499, 1524, 1583, 1689, 1722
TscAI	CASTG	5 cut(s)	145, 333, 679, 735, 1115
TseFI	GTSAC	3 cut(s)	835, 1067, 1144
TseI	GCWGC	8 cut(s)	206, 406, 531, 947, 950, 971, 1232, 1762
Tsp45I	GTSAC	3 cut(s)	835, 1067, 1144
TspDTI	ATGAA	5 cut(s)	393, 910, 945, 975, 1091
TspGWI	ACGGA	2 cut(s)	458, 772
TspRI	CASTG	5 cut(s)	145, 333, 679, 735, 1115
Vha464I	CTTAAG	2 cut(s)	434, 1322
VpaK11BI	GGWCC	4 cut(s)	297, 466, 1733, 1865
XapI	RAATTY	3 cut(s)	13, 536, 1591
XbaI	TCTAGA	2 cut(s)	115, 1657
XceI	RCATGY	1 cut(s)	356
XmiI	GTMKAC	2 cut(s)	144, 266
XspI	CTAG	4 cut(s)	116, 1652, 1658, 1833
ZraI	GACGTC	1 cut(s)	1579
ZrmI	AGTACT	1 cut(s)	1831
Zsp2I	ATGCAT	1 cut(s)	1372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.