Rh7CG134100

Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
10799589 .. 10806264
6676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG134100.1

Sequence Viewer

Length: 1581 bp
ATGTCTACGCCCAGCCTACAAGTGAGGGACAACATTGAACTAGATGAAACTGAGGAGAGAATCTTCACATTGCTGCTCAAAATGATTCACCAATGTAACCTCAAGACGGAGCTTCGCGTCGCTGGTGGATGGGTCCGGGATAAGCTTCTGGGACAAGAGTGCAAGGACATTGACATTGCTTTGGAAAATATGACCGGCAAAGACTTTGCTGAGAATGTCCAAAAGTACATGACCTCTGTGGGTGAAAAAGCTCAAGAAATTGCTGTCATTCGAAGCAATCCAAAGCAATCAAAACACTTGGAAACGGCGAGGATGCGCATTTTTGGATTGTGGATTGATTTTGTGAACTTACGTTGTGAAGAGTATAGTGACAACAGTCGCATTCCTAGTGACCAAAAATTTGGCACACCGGAACAAGATGCAATGAGGAGGGATCTGACCATCAATAGCTTGTTCTACAATGTTAATACTAAATCAGTTGAGGATTGGACCAATAGAGGAATTGACGATTTGAAATCAGGGATAATTGTGACTCCTCTACCACCAATGGAGACCTTGTTGGAGGATCCCCTGAGAGGTCTACGAGCTATCCGGATTTGCGCAAAGCGTGATGGATTCATACTAGATGAAGGACTAAAGGAAGCTGCTGCGAGTGATGAAGTGAGAGCTGCATTTGCTACTAAAATCAGCAGAGAGCGAATCGGAGCTGAAATTGATCTCATGATCTGTGGCAGTCATCCTGCCCGAGCTATGAAGGATATGTGTTACTTGAAGTGGTTTTGGGATGTCTTCAGTCTTCAGCCTCAGTGTGAGCCGCCATCGGAAGGATGCGACAGGGCTTGTGTAGCTTACTTGGATTGTGTATGTAGCCTTGTTCCGGTAATTGGGCGCACTACTTTTGATGATGAACAGAGAAGGCTCTCTTATTATGCTGCTATGTTCCTCCCACTTAGGAAGAACATGTACAGGGATGAGAAAGGTAAAGTTTTTCCTGTGGTGAATTACATTTTCAGATACTCCCTTAAGCAAAAAGTCAGTGATGCTGAAAGTGTTATGAAGATACACTATGCATTTGAGAAGTTCTTACCAAGATATTTAAAACCTTGGTTCTTACCTTTGCTTCCTCACTTTGGATCCAATGGAGCTGATGTTCAACAGGCTGAAGATGATTTGGGAATTGGAGAATATGTGGATGATGTCTCTGTTACTTCAAAAGAATCAAAACTCCGAGTATTGACAGGATTTCTCTTGCGAGAAGTTAAAGATTTTTGGCGAGTTGCTTTGCTCATGTGTTGTGCGCAAGATCCTTTGGACAAGAACTTCACACTAAAAGATCGAAGAGCGTTGTTTAGACAAGTTGAAAGGGCCATAGTTGATGATCTAGGCCTTGACAAAGTCTGGGATGTAAAGCCATTACTAGATGGAAACGCTATCATAAAACATTTGCAGCTTAAATCTGGAGGACCAGTTGTCAGTAAATGGCAAAGGAAAGTACTTGCATGGCAGCTAGCTCATCCTTCCGGGACTGCAGGGGAATGCATAGAGTGGATGATGGAAACTCATTCTTCAAATTACAATTAA

Protein Analysis

526

Amino Acids

60.28

Weight (kDa)

6.03

Isoelectric Point (pI)

37.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PolyA_pol PF01743 38 - 176 3.7e-31 Poly A polymerase head domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000288)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22660 AT1G22660 AT1G22660 AT1G22660 AT1G22660
fragaria_vesca FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440 FvH4_4g33440
malus_domestica MD05G1045700.v1.1 MD10G1052700.v1.1
prunus_persica Prupe.6G147900_v2.0.a1 Prupe.6G147900_v2.0.a1
pyrus_communis pycom05g03810 pycom10g03770
rosa_chinensis RchiOBHm_Chr3g0457671 RchiOBHm_Chr4g0411681 RchiOBHm_Chr4g0411871 RchiOBHm_Chr4g0412011 RchiOBHm_Chr4g0442691 RchiOBHm_Chr5g0054011 RchiOBHm_Chr7g0192731 RchiOBHm_Chr7g0217301 RchiOBHm_Chr7g0217311
rosa_laevigata RLG00000002496 RLG00000002497 RLG00000004333 RLG00000005141 RLG00000005991 RLG00000008329 RLG00000008334
rosa_multiflora Rmu_co8052866.1_g000001 Rmu_sc0000124.1_g000041 Rmu_sc0000711.1_g000018 Rmu_sc0000711.1_g000026 Rmu_sc0000711.1_g000049 Rmu_sc0001260.1_g000024 Rmu_sc0002040.1_g000016 Rmu_sc0003311.1_g000009 Rmu_sc0003541.1_g000049 Rmu_sc0007633.1_g000011 Rmu_sc0007784.1_g000001 Rmu_sc0007843.1_g000002 Rmu_sc0018873.1_g000007 Rmu_sc0037239.1_g000001 Rmu_ssc0000204.1_g000025
rosa_roxburghii Rroxscaffold_1G00010150 Rroxscaffold_2G00085070 Rroxscaffold_3G00237950 Rroxscaffold_3G00238000 Rroxscaffold_3G00238060 Rroxscaffold_3G00242460 Rroxscaffold_5G00356230 Rroxscaffold_5G00356320 Rroxscaffold_5G00357990 Rroxscaffold_5G00383500
rosa_rugosa Rorug04G0107400 Rorug04G0107400 Rorug04G0342400.1 Rorug04G0342500.1 Rorug04G0342600.1 Rorug06G0053100 Rorug06G0099700 Rorug07G0004300 Rorug07G0167800 Rorug07G0167900
rosa_samantha Rh2CG570300 Rh2DG609200 Rh4AG068500 Rh4AG169600 Rh4AG169900 Rh4AG170200 Rh4AG170600 Rh4AG202600 Rh4AG394800 Rh4BG066700 Rh4BG066800 Rh4BG166500 Rh4BG166600 Rh4BG166700 Rh4BG167000 Rh4BG167300 Rh4BG168500 Rh4BG169200 Rh4BG208600 Rh4BG407700 Rh4CG074000 Rh4CG181100 Rh4CG181200 Rh4CG181700 Rh4CG423100 Rh4DG163900 Rh4DG164400 Rh4DG165100 Rh4DG165200 Rh4DG200000 Rh4DG401800 Rh6BG194500 Rh6CG100200 Rh7AG129300 Rh7AG307100 Rh7BG130700 Rh7BG298000 Rh7CG134100 Rh7DG131500 Rh7DG306700
rosa_wichuraiana Rw0G007750 Rw4G014080 Rw4G014120 Rw4G014180 Rw4G017150 Rw4G034120 Rw7G011060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 3 cut(s) 317, 601, 1299
AccI GTMKAC 2 cut(s) 5, 580
AccII CGCG 1 cut(s) 117
AccIII TCCGGA 1 cut(s) 591
AciI CCGC 1 cut(s) 815
AclWI GGATC 6 cut(s) 441, 560, 573, 1128, 1141, 1298
AcsI RAATTY 1 cut(s) 398
AcuI CTGAAG 3 cut(s) 775, 782, 1182
AfaI GTAC 3 cut(s) 227, 965, 1494
AfiI CCNNNNNNNGG 6 cut(s) 106, 575, 824, 877, 884, 1130
AflII CTTAAG 1 cut(s) 1022
AflIII ACRYGT 1 cut(s) 960
AgsI TTSAA 7 cut(s) 38, 514, 772, 1154, 1212, 1361, 1569
AhdI GACNNNNNGTC 1 cut(s) 1469
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
Alw26I GTCTC 2 cut(s) 545, 1204
AlwI GGATC 6 cut(s) 441, 560, 573, 1128, 1141, 1298
Ama87I CYCGRG 1 cut(s) 744
Aor13HI TCCGGA 1 cut(s) 591
AoxI GGCC 2 cut(s) 1365, 1384
ApeKI GCWGC 7 cut(s) 73, 644, 647, 668, 932, 1447, 1504
ApoI RAATTY 1 cut(s) 398
ArsI GACNNNNNNTTYG 2 cut(s) 383, 415
AspLEI GCGC 4 cut(s) 318, 602, 891, 1300
AspS9I GGNCC 4 cut(s) 133, 489, 1365, 1463
AsuC2I CCSGG 2 cut(s) 137, 1522
AsuHPI GGTGA 3 cut(s) 80, 254, 1009
AsuII TTCGAA 1 cut(s) 271
AsuNHI GCTAGC 1 cut(s) 1507
AvaI CYCGRG 1 cut(s) 744
AvaII GGWCC 3 cut(s) 133, 489, 1463
BamHI GGATCC 2 cut(s) 565, 1133
BarI GAAGNNNNNNTAC 2 cut(s) 947, 979
BbsI GAAGAC 2 cut(s) 781, 788
BbvI GCAGC 7 cut(s) 60, 631, 634, 655, 919, 1459, 1516
BccI CCATC 6 cut(s) 123, 449, 605, 826, 1415, 1546
BceAI ACGGC 1 cut(s) 321
BcnI CCSGG 2 cut(s) 137, 1522
BcoDI GTCTC 2 cut(s) 545, 1204
BfaI CTAG 6 cut(s) 41, 387, 623, 1382, 1418, 1508
BfmI CTRYAG 1 cut(s) 1527
BfrI CTTAAG 1 cut(s) 1022
BisI GCNGC 8 cut(s) 74, 645, 648, 669, 815, 933, 1448, 1505
BlsI GCNGC 8 cut(s) 75, 646, 649, 670, 816, 934, 1449, 1506
BmcAI AGTACT 1 cut(s) 1494
Bme1390I CCNGG 2 cut(s) 137, 1522
Bme18I GGWCC 3 cut(s) 133, 489, 1463
BmeRI GACNNNNNGTC 1 cut(s) 1469
BmeT110I CYCGRG 1 cut(s) 744
BmgT120I GGNCC 4 cut(s) 133, 489, 1365, 1463
BmiI GGNNCC 3 cut(s) 134, 567, 1135
BmrFI CCNGG 2 cut(s) 137, 1522
BmsI GCATC 4 cut(s) 303, 409, 818, 1030
BmtI GCTAGC 1 cut(s) 1511
BoxI GACNNNNGTC 1 cut(s) 375
BpiI GAAGAC 2 cut(s) 781, 788
BpmI CTGGAG 1 cut(s) 1479
Bpu14I TTCGAA 1 cut(s) 271
BpuEI CTTGAG 2 cut(s) 86, 237
BpuMI CCSGG 2 cut(s) 137, 1522
BsaI GGTCTC 1 cut(s) 545
BsaJI CCNNGG 1 cut(s) 1103
BsaWI WCCGGW 3 cut(s) 409, 591, 877
BsaXI ACNNNNNCTCC 8 cut(s) 542, 572, 1134, 1164, 1173, 1203, 1452, 1482
Bsc4I CCNNNNNNNGG 6 cut(s) 106, 575, 824, 877, 884, 1130
Bse118I RCCGGY 1 cut(s) 194
Bse1I ACTGG 1 cut(s) 1466
Bse3DI GCAATG 3 cut(s) 68, 174, 429
BseAI TCCGGA 1 cut(s) 591
BseDI CCNNGG 1 cut(s) 1103
BseLI CCNNNNNNNGG 6 cut(s) 106, 575, 824, 877, 884, 1130
BseMI GCAATG 3 cut(s) 68, 174, 429
BseMII CTCAG 4 cut(s) 42, 201, 563, 818
BseNI ACTGG 1 cut(s) 1466
BseRI GAGGAG 3 cut(s) 68, 442, 525
BseXI GCAGC 7 cut(s) 60, 631, 634, 655, 919, 1459, 1516
BseYI CCCAGC 1 cut(s) 11
Bsh1236I CGCG 1 cut(s) 117
BshFI GGCC 2 cut(s) 1367, 1386
BsiHKCI CYCGRG 1 cut(s) 744
BsiSI CCGG 6 cut(s) 136, 195, 410, 592, 878, 1521
BslFI GGGAC 3 cut(s) 41, 165, 1537
BslI CCNNNNNNNGG 6 cut(s) 106, 575, 824, 877, 884, 1130
BsmAI GTCTC 2 cut(s) 545, 1204
BsmFI GGGAC 3 cut(s) 41, 165, 1537
BsmI GAATGC 2 cut(s) 381, 1541
BsnI GGCC 2 cut(s) 1367, 1386
Bso31I GGTCTC 1 cut(s) 545
BsoBI CYCGRG 1 cut(s) 744
Bsp119I TTCGAA 1 cut(s) 271
Bsp13I TCCGGA 1 cut(s) 591
Bsp1407I TGTACA 1 cut(s) 963
Bsp143I GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
BspACI CCGC 1 cut(s) 815
BspANI GGCC 2 cut(s) 1367, 1386
BspCNI CTCAG 4 cut(s) 43, 202, 564, 817
BspEI TCCGGA 1 cut(s) 591
BspFNI CGCG 1 cut(s) 117
BspHI TCATGA 1 cut(s) 720
BspLI GGNNCC 3 cut(s) 134, 567, 1135
BspMAI CTGCAG 1 cut(s) 1531
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 6 cut(s) 441, 560, 573, 1128, 1141, 1298
BspQI GCTCTTC 1 cut(s) 1333
BspT104I TTCGAA 1 cut(s) 271
BspTI CTTAAG 1 cut(s) 1022
BspTNI GGTCTC 1 cut(s) 545
BsrDI GCAATG 3 cut(s) 68, 174, 429
BsrFI RCCGGY 1 cut(s) 194
BsrGI TGTACA 1 cut(s) 963
BsrI ACTGG 1 cut(s) 1466
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 1 cut(s) 1103
BssMI GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
BssT1I CCWWGG 1 cut(s) 1103
Bst4CI ACNGT 1 cut(s) 377
Bst6I CTCTTC 2 cut(s) 354, 1333
BstAFI CTTAAG 1 cut(s) 1022
BstAUI TGTACA 1 cut(s) 963
BstBI TTCGAA 1 cut(s) 271
BstC8I GCNNGC 1 cut(s) 1509
BstDEI CTNAG 5 cut(s) 51, 210, 572, 804, 950
BstFNI CGCG 1 cut(s) 117
BstHHI GCGC 4 cut(s) 318, 602, 891, 1300
BstKTI GATC 8 cut(s) 436, 568, 718, 726, 1136, 1306, 1336, 1381
BstMAI GTCTC 2 cut(s) 545, 1204
BstMBI GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
BstMWI GCNNNNNNNGC 2 cut(s) 674, 845
BstNSI RCATGY 1 cut(s) 964
BstPAI GACNNNNGTC 1 cut(s) 375
BstSCI CCNGG 2 cut(s) 135, 1520
BstSFI CTRYAG 1 cut(s) 1527
BstUI CGCG 1 cut(s) 117
BstV1I GCAGC 7 cut(s) 60, 631, 634, 655, 919, 1459, 1516
BstV2I GAAGAC 2 cut(s) 781, 788
BstX2I RGATCY 4 cut(s) 433, 565, 1133, 1303
BstXI CCANNNNNNTGG 1 cut(s) 401
BstYI RGATCY 4 cut(s) 433, 565, 1133, 1303
BsuRI GGCC 2 cut(s) 1367, 1386
BtsIMutI CAGTG 2 cut(s) 812, 1042
Cac8I GCNNGC 1 cut(s) 1509
CciI TCATGA 1 cut(s) 720
CfoI GCGC 4 cut(s) 318, 602, 891, 1300
Cfr10I RCCGGY 1 cut(s) 194
Cfr13I GGNCC 4 cut(s) 133, 489, 1365, 1463
CseI GACGC 1 cut(s) 106
Csp6I GTAC 3 cut(s) 226, 964, 1493
CviAII CATG 5 cut(s) 229, 721, 961, 1288, 1500
CviQI GTAC 3 cut(s) 226, 964, 1493
DdeI CTNAG 5 cut(s) 51, 210, 572, 804, 950
DpnI GATC 8 cut(s) 435, 567, 717, 725, 1135, 1305, 1335, 1380
DpnII GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
DraI TTTAAA 1 cut(s) 1098
DriI GACNNNNNGTC 1 cut(s) 1469
Eam1104I CTCTTC 2 cut(s) 354, 1333
Eam1105I GACNNNNNGTC 1 cut(s) 1469
EarI CTCTTC 2 cut(s) 354, 1333
Eco130I CCWWGG 1 cut(s) 1103
Eco147I AGGCCT 1 cut(s) 1386
Eco31I GGTCTC 1 cut(s) 545
Eco47I GGWCC 3 cut(s) 133, 489, 1463
Eco57I CTGAAG 3 cut(s) 775, 782, 1182
Eco88I CYCGRG 1 cut(s) 744
EcoT14I CCWWGG 1 cut(s) 1103
EcoT22I ATGCAT 2 cut(s) 1072, 1541
ErhI CCWWGG 1 cut(s) 1103
FaeI CATG 5 cut(s) 232, 724, 964, 1291, 1503
FalI AAGNNNNNCTT 2 cut(s) 907, 939
FaqI GGGAC 3 cut(s) 41, 165, 1537
FatI CATG 5 cut(s) 228, 720, 960, 1287, 1499
FblI GTMKAC 2 cut(s) 5, 580
Fnu4HI GCNGC 8 cut(s) 74, 645, 648, 669, 815, 933, 1448, 1505
Fsp4HI GCNGC 8 cut(s) 74, 645, 648, 669, 815, 933, 1448, 1505
FspAI RTGCGCAY 1 cut(s) 317
FspBI CTAG 6 cut(s) 41, 387, 623, 1382, 1418, 1508
FspI TGCGCA 3 cut(s) 317, 601, 1299
GlaI GCGC 4 cut(s) 317, 601, 890, 1299
GluI GCNGC 8 cut(s) 74, 645, 648, 669, 815, 933, 1448, 1505
GsaI CCCAGC 1 cut(s) 15
GsuI CTGGAG 1 cut(s) 1479
HaeIII GGCC 2 cut(s) 1367, 1386
HapII CCGG 6 cut(s) 136, 195, 410, 592, 878, 1521
HgaI GACGC 1 cut(s) 106
HhaI GCGC 4 cut(s) 318, 602, 891, 1300
Hin1II CATG 5 cut(s) 232, 724, 964, 1291, 1503
Hin6I GCGC 4 cut(s) 316, 600, 889, 1298
HinP1I GCGC 4 cut(s) 316, 600, 889, 1298
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 6 cut(s) 60, 85, 532, 615, 699, 1217
HpaII CCGG 6 cut(s) 136, 195, 410, 592, 878, 1521
HphI GGTGA 3 cut(s) 80, 254, 1009
Hpy166II GTNNAC 3 cut(s) 6, 346, 581
Hpy188I TCNGA 5 cut(s) 438, 704, 823, 1013, 1229
Hpy188III TCNNGA 5 cut(s) 103, 254, 592, 721, 1458
Hpy8I GTNNAC 3 cut(s) 6, 346, 581
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 5 cut(s) 623, 748, 818, 909, 1527
HpyCH4III ACNGT 1 cut(s) 377
HpyCH4IV ACGT 1 cut(s) 352
HpyCH4V TGCA 8 cut(s) 162, 422, 671, 1070, 1447, 1499, 1529, 1539
HpyF10VI GCNNNNNNNGC 2 cut(s) 674, 845
HpyF3I CTNAG 5 cut(s) 51, 210, 572, 804, 950
HpySE526I ACGT 1 cut(s) 352
Hsp92II CATG 5 cut(s) 232, 724, 964, 1291, 1503
HspAI GCGC 4 cut(s) 316, 600, 889, 1298
Kpn2I TCCGGA 1 cut(s) 591
Kzo9I GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
LguI GCTCTTC 1 cut(s) 1333
LmnI GCTCC 3 cut(s) 109, 704, 1142
Lsp1109I GCAGC 7 cut(s) 60, 631, 634, 655, 919, 1459, 1516
LweI GCATC 4 cut(s) 303, 409, 818, 1030
MaeI CTAG 6 cut(s) 41, 387, 623, 1382, 1418, 1508
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 6 cut(s) 95, 368, 389, 529, 764, 1204
MalI GATC 8 cut(s) 435, 567, 717, 725, 1135, 1305, 1335, 1380
MboI GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
MboII GAAGA 9 cut(s) 55, 371, 781, 788, 967, 1069, 1175, 1350, 1557
MflI RGATCY 4 cut(s) 433, 565, 1133, 1303
MlyI GAGTC 1 cut(s) 526
MmeI TCCRAC 1 cut(s) 540
Mph1103I ATGCAT 2 cut(s) 1072, 1541
MroI TCCGGA 1 cut(s) 591
MseI TTAA 6 cut(s) 465, 1023, 1097, 1260, 1452, 1579
MspCI CTTAAG 1 cut(s) 1022
MspI CCGG 6 cut(s) 136, 195, 410, 592, 878, 1521
MspR9I CCNGG 2 cut(s) 137, 1522
Mva1269I GAATGC 2 cut(s) 381, 1541
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 2 cut(s) 674, 845
NciI CCSGG 2 cut(s) 137, 1522
NdeII GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
NheI GCTAGC 1 cut(s) 1507
NlaIII CATG 5 cut(s) 232, 724, 964, 1291, 1503
NlaIV GGNNCC 3 cut(s) 134, 567, 1135
NmuCI GTSAC 3 cut(s) 368, 389, 529
NsbI TGCGCA 3 cut(s) 317, 601, 1299
NsiI ATGCAT 2 cut(s) 1072, 1541
NspI RCATGY 1 cut(s) 964
NspV TTCGAA 1 cut(s) 271
PagI TCATGA 1 cut(s) 720
PceI AGGCCT 1 cut(s) 1386
PciI ACATGT 1 cut(s) 960
PciSI GCTCTTC 1 cut(s) 1333
PctI GAATGC 2 cut(s) 381, 1541
PfeI GAWTC 5 cut(s) 60, 85, 615, 699, 1217
PflFI GACNNNGTC 1 cut(s) 1394
PfoI TCCNGGA 2 cut(s) 135, 1520
PkrI GCNGC 8 cut(s) 75, 646, 649, 670, 816, 934, 1449, 1506
PleI GAGTC 1 cut(s) 526
PpsI GAGTC 1 cut(s) 526
PscI ACATGT 1 cut(s) 960
PshAI GACNNNNGTC 1 cut(s) 375
PspFI CCCAGC 1 cut(s) 11
PspN4I GGNNCC 3 cut(s) 134, 567, 1135
PspPI GGNCC 4 cut(s) 133, 489, 1365, 1463
PstI CTGCAG 1 cut(s) 1531
PsuI RGATCY 4 cut(s) 433, 565, 1133, 1303
PsyI GACNNNGTC 1 cut(s) 1394
RsaI GTAC 3 cut(s) 227, 965, 1494
RsaNI GTAC 3 cut(s) 226, 964, 1493
SapI GCTCTTC 1 cut(s) 1333
SaqAI TTAA 6 cut(s) 465, 1023, 1097, 1260, 1452, 1579
SatI GCNGC 8 cut(s) 74, 645, 648, 669, 815, 933, 1448, 1505
Sau3AI GATC 8 cut(s) 433, 565, 715, 723, 1133, 1303, 1333, 1378
Sau96I GGNCC 4 cut(s) 133, 489, 1365, 1463
ScaI AGTACT 1 cut(s) 1494
SchI GAGTC 1 cut(s) 526
ScrFI CCNGG 2 cut(s) 137, 1522
SfaNI GCATC 4 cut(s) 303, 409, 818, 1030
SfcI CTRYAG 1 cut(s) 1527
SfuI TTCGAA 1 cut(s) 271
SinI GGWCC 3 cut(s) 133, 489, 1463
SmlI CTYRAG 3 cut(s) 101, 252, 1022
SmoI CTYRAG 3 cut(s) 101, 252, 1022
SseBI AGGCCT 1 cut(s) 1386
SsiI CCGC 1 cut(s) 815
SspMI CTAG 6 cut(s) 41, 387, 623, 1382, 1418, 1508
StuI AGGCCT 1 cut(s) 1386
StyD4I CCNGG 2 cut(s) 135, 1520
StyI CCWWGG 1 cut(s) 1103
TaaI ACNGT 1 cut(s) 377
TaiI ACGT 1 cut(s) 355
TaqI TCGA 2 cut(s) 271, 1336
TatI WGTACW 3 cut(s) 225, 963, 1492
TauI GCSGC 1 cut(s) 817
TfiI GAWTC 5 cut(s) 60, 85, 615, 699, 1217
Tru1I TTAA 6 cut(s) 465, 1023, 1097, 1260, 1452, 1579
Tru9I TTAA 6 cut(s) 465, 1023, 1097, 1260, 1452, 1579
TscAI CASTG 2 cut(s) 812, 1042
TseFI GTSAC 3 cut(s) 368, 389, 529
TseI GCWGC 7 cut(s) 73, 644, 647, 668, 932, 1447, 1504
Tsp45I GTSAC 3 cut(s) 368, 389, 529
TspDTI ATGAA 7 cut(s) 60, 607, 642, 672, 767, 921, 1070
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 2 cut(s) 812, 1042
Tth111I GACNNNGTC 1 cut(s) 1394
Vha464I CTTAAG 1 cut(s) 1022
VpaK11BI GGWCC 3 cut(s) 133, 489, 1463
XapI RAATTY 1 cut(s) 398
XceI RCATGY 1 cut(s) 964
XmiI GTMKAC 2 cut(s) 5, 580
XspI CTAG 6 cut(s) 41, 387, 623, 1382, 1418, 1508
ZrmI AGTACT 1 cut(s) 1494
Zsp2I ATGCAT 2 cut(s) 1072, 1541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.