pycom17g21770

pre-mRNA-processing-splicing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000798
Physical Location & Seq
Forward (+)
20219766 .. 20226742
6977 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g21770.4

Sequence Viewer

Length: 5226 bp
ATGGAGTCTTTTTTTACAGCCAAAGCACTCAATATGTGCATTCCAGGTGGACCTAAATTTGAACCATTGTATCGGGATATGGAGAAAGGGGATGAGGACTGGAATGAGTTTAATGACATCAACAAACTCATTATTCGGTCACCTCTCAGAACGGAGTATAGGATTGCATTCCCTCATCTCTACAACAATAGACCCAGGAAGGTCAAGCTTTGTGTGTATCACACACCCATGGTGATGTACATAAAAACCGAGGATCCTGATCTACCTGGGTTTTATTATGATCCATTGATACACCCAATACCCAGCACTAATAAGGATAGGCGTGAGAAGAAAACTTCTGATGAGGAGGAAGATGATATCTTTACATTGCCGGATGTGGTGGAACCATTTCTCAAAGATACTCAGCTTTATACTGACACCACAGCTGCCGGAATCTCTCTTTTGTTTGCCCCACGCCCTTTTAACATGAGATCTGGTCGGACCCGTCGCGCAGAAGATATACCCCTTGTGTCTGAGTGGTACAAGGAACATTGTCCTCCTTCATATCCAGTTAAAGTTCGGGTCAGCTATCAGAAATTGCTGAAGTGTTTTGTATTGAACGAGCTGCATCATAGACCACCCAAAGCTCAAAAGAAGAAACATTTGTTTCGATCTCTTCAAGCTACCAAGTTCTTCCAAACTACAGAACTTGATTGGGCTGAAGCGGGTCTTCAAGTCTGTAAGCAGGGTTATAACATGCTTAATCTGTTGATCCACAGGAAAAATTTGAATTACCTTCACCTTGATTATAATTTCAATCTGAAGCCTGTGAAGACTTTGACAACAAAAGAGCGTAAGAAATCCCGGTTTGGTAATGCTTTTCATCTGTGCCGTGAAATCTTGCGGTTGACAAAGCTTGTAGTTGATGCCAATATCCAGTTCCGTTTGGGTAATGTTGATGCCTTTCAATTGGCTGATGGCCTACAATACACGTTTTCTCATGTTGGTCAGTTGACTGGAATGTACCGTTACAAGTATAGGTTGATGAGGCAGATTAGAATGTGCAAAGATTTGAAGCACTTGATTTACTACCGGTTCAATACTGGGCCTGTGGGAAAAGGACCGGGATGTGGGTTCTGGGCACCAATGTGGAGGGTGTGGTTGTTCTTCCTTCGTGGCATAGTACCTCTTCTGGAACGGTGGCTGGGAAATTTACTTGCACGACAGTTTGAAGGGCGCCATTCAAAAGGAGTGGCAAAGACTGTTACTAAGCAGCGTGTTGAAAGCCATTTTGACTTGGAGCTTCGAGCTGCTGTGATGCATGATGTTCTTGATGCCATGCCAGAGGGTATCAAGCAAAATAAAGCCAGAACTATCTTGCAACATCTCAGTGAGGCATGGCGCTGCTGGAAAGCTAACATCCCTTGGAAGGTTCCTGGTTTGCCTGTTCCTATTGAAAATATGATTCTTCGTTATGTGAAGTCGAAGGCAGACTGGTGGACAAATGTTGCTCACTACAATCGTGAACGTATAAGAAGAGGTGCTACTGTAGATAAGACAGTTTGTCGGAAGAATCTAGGAAGATTAACTCGTCTCTGGCTAAAGGCAGAGCAGGAGCGTCAGCACAATTATTTGAAAGATGGTCCATATGTTACACCAGAAGAGGCAGTTGCAATTTACACCACAACCGTGCACTGGTTGGAATCAAGAAAGTTTACACCCATTCCGTTCCCTCCATTGTCATACAAACATGACACCAAGCTTCTGATCCTTGCTCTGGAGAGGTTAAAGGAGTCTTATAGTGTGGCTGTAAGATTGAACCAGCTTCAAAGAGAAGAGTTGGGTCTCATTGAACAAGCCTATGACAATCCTCACGAGGCATTGTCACGAATTAAGCGCCACTTGCTCACTCAGCGTGCATTCAAAGAAGTTGGTATAGAGTTCATGGATTTGTATAGCTATCTGATTCCAGTTTATGAGATAGAACCTCTTGAGAAGATTACAGATGCTTATCTTGATCAATATTTATGGTATGAGGGTGACAAACGTCATCTCTTTCCAAACTCGATCAAGCCTGCAGATTCAGAGCCACCTCCACTCTTGGTTTATAAATGGTGTCAGGGAATAAACAATTTACAGAGCATATGGGACACGAGTGAGGGGCAGTGTGTGGTGATGCTTCAAACGAAGTTTGAGAAGTTTTTTGAAAAGATTGACTTGACAATGCTAAATAGGCTCCTGCGTCTTGTTCTTGACCATAATATTGCTGATTATGTCACTGCAAAGAACAATGTGGTATTGTCTTACAAAGATATGAGTCATACAAATTCGTATGGTCTCATACGTGGTCTTCAGTTTGCATCTTTTGTAGTGCAATATTATGGGCTTGTGTTGGATCTGTTACTTCTTGGGTTGACTCGGGCCAGTGAAATTGCCGGTCCACCCCAGATGCCAAATGAATTCATCACCTATTGGGATACAAAGGTTGAGACACGGCATCCTATCAGGCTGTATTCTAGATACATAGACAGGGTGCATATCTTGTTCCGCTTCACCCACGAGGAGGCTCGTGATCTTATTCAGCGATATCTTACCGAGCATCCAGATCCCAATAATGAAAATATGGTTGGATACAATAATAAGAAATGCTGGCCAAGAGATGCTAGAATGAGGCTCATGAAACATGATGTCAATCTTGGGAGGAGTGTTTTCTGGGATATGAAGAACCGTCTCCCTCGAAGCATCACAACTTTGGAGTGGGAGAACAGCTTTGTTTCTGTTTATAGCAAGGATAATCCAAATTTGCTTTTCAGCATGTGTGGATTTGAAGTTCGGATACTTCCCAAGATAAGAATGAGTCAAGAAGCATTCAGCAACACTAGGGATGGGGTTTGGAATTTGCAGAATGAGCAAACAAAGGAGAGGACTGCAGTTGCTTTCTTACGTGTTGATGATGAACACATGAAGGTGTTTGAGAATCGTGTGAGGCAGATTCTTATGTCTTCAGGGTCTACAACATTTACAAAAATTGTCAACAAGTGGAATACAGCACTTATTGGTCTAATGACTTACTTCCGTGAAGCAACTGTTCATACACAAGAACTTTTGGATTTGCTTGTTAAATGTGAAAATAAGATTCAGACCCGTATTAAGATTGGGTTGAATTCAAAGATGCCTAGCAGGTTTCCACCTGTCATCTTTTACACGCCAAAGGAAATTGGAGGGCTTGGCATGTTATCTATGGGGCACATATTGATTCCACAAAGTGACCTCCGCTTCAGTCAGCAGACTGATGTTGGTGTGAGTCATTTTAGGAGTGGAATGAGTCATGAAGGGGACCAGCTGATTCCAAATCTTTACCGTTACATACAACCATGGGAGAGTGAATTTATAGATTCACAACGTGTTTGGGCAGAATATGCACTGAAAAGGCAGGAAGCTCAGGCACAAAATAGGCGTCTGACTCTTGAAGATTTGGAAGATTCATGGGATAGGGGAATACCACGCATAAATACTTTGTTCCAAAAGGACCGGCATACTTTAGCATATGACAAAGGTTGGAGAGTTCGGACAGATTTTAAGCAGTACCAAGTGTTGAAACAAAATCCTTTCTGGTGGACACACCAGAGGCATGATGGGAAATTGTGGAACTTAAACAACTACCGAACTGATGTGATTCAAGCCCTTGGAGGTGTTGAAGGAATCCTTGAGCATACGTTATTCAAAGGAACATACTTTCCTACCTGGGAGGGGCTCTTCTGGGAGAAAGCATCTGGTTTTGAGGAGTCGATGAAGTATAAAAAGCTGACAAATGCACAGAGATCTGGGCTCAATCAAATACCCAATCGTAGGTTTACTCTCTGGTGGTCACCTACCATAAATCGGGCCAATGTATATGTTGGTTTCCAAGTGCAGCTAGATTTAACTGGAATATTTATGCACGGGAAGATTCCAACCTTGAAGATATCACTGATTCAGATATTCCGTGCTCACTTGTGGCAGAAGATTCATGAAAGTGTTGTCATGGATCTCTGTCAGGTTTTGGATCAAGAGTTGGATGCTTTGGAAATTGAAACCGTGCAAAAGGAAACGATACATGCCAGGAAGAGTTACAAAATGAACAGCTCTTGTGCTGACATTCTTCTGTTTGCTGCCCATAGATGGCCAATGTCGAAACCTAGCCTTGTTGCTGAGCCAAAGGATGTGTTTGACCAGAAAGCGAGCAATAAGTACTGGATAGATGTACAACTCCGTTGGGGAGATTATGATTCTCACGATATTGAGCGTTACACCCGAGCTAAGTTTATGGACTACACCACTGACAACATGTCCATCTATCCATCTCCCACAGGGGTGATGATTGGTCTTGATTTGGCATATAATTTGCATTCTGCATTTGGTAACTGGTTTCCTGGTTCAAAACCGCTGCTTCAACAGGCAATGAACAAGATCATGAAATCAAATCCAGCCTTGTATGTCCTGAGGGAGCGAATAAGGAAAGGATTGCAGCTGTATTCTTCCGAGCCTACAGAGCCATATTTGTCATCCCAAAACTATGGGGAGATCTTCAGCAATCAAATCATTTGGTTTGTTGATGATACCAATGTGTATCGTGTTACAATCCATAAGACATTTGAAGGAAATCTCACTACAAAACCAATCAATGGTGCTATCTTCATATTCAATCCAAGGACGGGGCAGCTATTCCTGAAGGTTATCCACACAAGTGTGTGGGCGGGACAGAAGCGTCTTGGTCAGTTGGCTAAGTGGAAAACTGCAGAAGAAGTTGCTGCACTTGTGCGTTCTTTGCCAGTGGAAGAACAGCCAAAACAAATTATTGTGACTCGTAAGGGAATGTTGGATCCCTTAGAGGTTCATTTGCTCGATTTCCCCAACATAGTCATAAAAGGAAGTGAGCTGCAGCTTCCTTTCCAAGCTTGTTTGAAGATCGAGAAATTTGGTGATCTGATATTGAAGGCTACTGAACCACAGATGGTTCTTTTCAATATTTATGATGACTGGTTGAAGAGTATTTCATCATACACTGCATTCTCTCGGTTAATTTTGATTCTTCGTGCACTTCATGTGAACAATGAGAAGGCAAAGATGTTACTGAAGCCTGATAAAACGGTCATTACCGAGCCGCATCACATCTGGCCTTCTCTTTCTGATGATCAATGGATGAAGGTTGAGGTTGCTCTAAGGGATCGATCATATTGTCAGACTACGCAAAAAAGAACAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000244 GO:0000375 GO:0000377 GO:0000380 GO:0000386 GO:0000387 GO:0000398 GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005684 GO:0005737 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0010467 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0030619 GO:0030620 GO:0030623 GO:0031593 GO:0032496 GO:0032991 GO:0033993 GO:0034097 GO:0034612 GO:0034622 GO:0034641 GO:0036002 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065003 GO:0070530 GO:0070887 GO:0071005 GO:0071007 GO:0071011 GO:0071013 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071345 GO:0071356 GO:0071396 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097157 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:0140030 GO:0140098 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902494 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
JAB PRO8NT PROCN PROCT PRP8_domainIV RRM_4 U5_2-snRNA_bdg U6-snRNA_bdg

Protein Analysis

1742

Amino Acids

204.25

Weight (kDa)

9.29

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 732, 789, 2088
AasI GACNNNNNNGTC 1 cut(s) 4725
Acc36I ACCTGC 1 cut(s) 3150
AccB1I GGYRCC 2 cut(s) 1120, 1215
AccB7I CCANNNNNTGG 1 cut(s) 4643
AccI GTMKAC 1 cut(s) 2990
AccII CGCG 1 cut(s) 489
AciI CCGC 7 cut(s) 704, 883, 2527, 3253, 4403, 4715, 5123
AcoI YGGCCR 2 cut(s) 2630, 4142
AcuI CTGAAG 9 cut(s) 602, 720, 821, 2315, 2967, 3241, 4531, 4709, 5114
AcyI GRCGYC 2 cut(s) 1216, 3436
AdeI CACNNNGTG 2 cut(s) 3245, 3383
AfaI GTAC 7 cut(s) 239, 521, 1004, 1164, 3566, 4211, 4224
AflIII ACRYGT 4 cut(s) 969, 2923, 3382, 4305
AgeI ACCGGT 1 cut(s) 1071
AhdI GACNNNNNGTC 2 cut(s) 1542, 4306
AjnI CCWGG 7 cut(s) 43, 194, 265, 1414, 3722, 4079, 4390
AjuI GAANNNNNNNTTGG 4 cut(s) 902, 934, 2589, 2621
AleI CACNNNNGTG 5 cut(s) 1126, 1667, 4331, 4704, 4706
AloI GAACNNNNNNTCC 4 cut(s) 2793, 2825, 3700, 3732
Alw21I GWGCWC 3 cut(s) 1674, 3970, 5059
Alw26I GTCTC 5 cut(s) 1577, 1829, 2321, 2462, 2714
Alw44I GTGCAC 2 cut(s) 1670, 5055
Ama87I CYCGRG 2 cut(s) 2397, 4272
AoxI GGCC 7 cut(s) 958, 1085, 2400, 2630, 3864, 4142, 5135
ApaLI GTGCAC 2 cut(s) 1670, 5055
ArsI GACNNNNNNTTYG 2 cut(s) 3421, 3453
AsiGI ACCGGT 1 cut(s) 1071
Asp700I GAANNNNTTC 1 cut(s) 387
AspLEI GCGC 4 cut(s) 491, 1218, 1383, 1878
AsuC2I CCSGG 2 cut(s) 844, 1104
AvaI CYCGRG 2 cut(s) 2397, 4272
AvaII GGWCC 7 cut(s) 50, 480, 1100, 1622, 2417, 3316, 3508
AxyI CCTNAGG 1 cut(s) 4460
BaeGI GKGCMC 4 cut(s) 1123, 1674, 3228, 5059
BaeI ACNNNNGTAYC 6 cut(s) 53, 86, 2448, 2481, 4569, 4602
BalI TGGCCA 2 cut(s) 2632, 4144
BamHI GGATCC 2 cut(s) 253, 4840
BanI GGYRCC 2 cut(s) 1120, 1215
BanII GRGCYC 2 cut(s) 3735, 3810
BarI GAAGNNNNNNTAC 4 cut(s) 1507, 1539, 2799, 2831
BauI CACGAG 4 cut(s) 1853, 2131, 2537, 2547
BbsI GAAGAC 4 cut(s) 701, 818, 2321, 2973
Bbv12I GWGCWC 3 cut(s) 1674, 3970, 5059
BccI CCATC 8 cut(s) 950, 1613, 2858, 3608, 4134, 4319, 4327, 4966
BceAI ACGGC 2 cut(s) 855, 2489
BciT130I CCWGG 7 cut(s) 45, 196, 267, 1416, 3724, 4081, 4392
BciVI GTATCC 3 cut(s) 2449, 2603, 2808
BclI TGATCA 2 cut(s) 1996, 5152
BcnI CCSGG 2 cut(s) 844, 1104
BcoDI GTCTC 5 cut(s) 1577, 1829, 2321, 2462, 2714
BfaI CTAG 7 cut(s) 1556, 2496, 2643, 2859, 3156, 3896, 4158
BfmI CTRYAG 7 cut(s) 681, 1527, 2055, 2907, 4506, 4755, 4898
BfoI RGCGCY 3 cut(s) 1219, 1384, 1879
BfuAI ACCTGC 1 cut(s) 3150
BfuI GTATCC 3 cut(s) 2449, 2603, 2808
BglII AGATCT 3 cut(s) 470, 3800, 4542
BlpI GCTNAGC 1 cut(s) 4170
BmcAI AGTACT 1 cut(s) 4211
Bme1390I CCNGG 9 cut(s) 45, 196, 267, 844, 1104, 1416, 3724, 4081, 4392
Bme18I GGWCC 7 cut(s) 50, 480, 1100, 1622, 2417, 3316, 3508
BmeRI GACNNNNNGTC 2 cut(s) 1542, 4306
BmeT110I CYCGRG 2 cut(s) 2397, 4272
BmiI GGNNCC 9 cut(s) 255, 384, 482, 1122, 1217, 1413, 2216, 3317, 4842
BmrFI CCNGG 9 cut(s) 45, 196, 267, 844, 1104, 1416, 3724, 4081, 4392
BmrI ACTGGG 1 cut(s) 1092
BmuI ACTGGG 1 cut(s) 1092
BoxI GACNNNNGTC 1 cut(s) 2025
BpiI GAAGAC 4 cut(s) 701, 818, 2321, 2973
BpmI CTGGAG 1 cut(s) 1778
Bpu10I CCTNAGC 1 cut(s) 3420
Bpu1102I GCTNAGC 1 cut(s) 4170
BpuEI CTTGAG 2 cut(s) 1991, 3707
BpuMI CCSGG 2 cut(s) 844, 1104
Bsa29I ATCGAT 1 cut(s) 5188
BsaAI YACGTR 2 cut(s) 2324, 2924
BsaBI GATNNNNATC 3 cut(s) 258, 1989, 2670
BsaHI GRCGYC 2 cut(s) 1216, 3436
BsaI GGTCTC 2 cut(s) 1829, 2321
BsaJI CCNNGG 9 cut(s) 194, 228, 249, 266, 1403, 3353, 3664, 3723, 4667
BsaWI WCCGGW 1 cut(s) 1071
Bse118I RCCGGY 3 cut(s) 1071, 2414, 3510
Bse21I CCTNAGG 1 cut(s) 4460
Bse3DI GCAATG 2 cut(s) 365, 4425
Bse8I GATNNNNATC 3 cut(s) 258, 1989, 2670
BseBI CCWGG 7 cut(s) 45, 196, 267, 1416, 3724, 4081, 4392
BseCI ATCGAT 1 cut(s) 5188
BseDI CCNNGG 9 cut(s) 194, 228, 249, 266, 1403, 3353, 3664, 3723, 4667
BseJI GATNNNNATC 3 cut(s) 258, 1989, 2670
BseMI GCAATG 2 cut(s) 365, 4425
BseMII CTCAG 8 cut(s) 160, 416, 504, 1381, 1904, 3434, 4161, 4451
BseRI GAGGAG 4 cut(s) 359, 2555, 2695, 3776
BseSI GKGCMC 4 cut(s) 1123, 1674, 3228, 5059
BseYI CCCAGC 2 cut(s) 302, 1183
BsgI GTGCAG 2 cut(s) 3911, 4755
Bsh1236I CGCG 1 cut(s) 489
BshFI GGCC 7 cut(s) 960, 1087, 2402, 2632, 3866, 4144, 5137
BshNI GGYRCC 2 cut(s) 1120, 1215
BshTI ACCGGT 1 cut(s) 1071
BshVI ATCGAT 1 cut(s) 5188
BsiHKAI GWGCWC 3 cut(s) 1674, 3970, 5059
BsiHKCI CYCGRG 2 cut(s) 2397, 4272
BsiSI CCGG 7 cut(s) 371, 429, 844, 1072, 1103, 2415, 3511
BslFI GGGAC 3 cut(s) 2141, 3329, 4731
BsmAI GTCTC 5 cut(s) 1577, 1829, 2321, 2462, 2714
BsmBI CGTCTC 2 cut(s) 1577, 2714
BsmFI GGGAC 3 cut(s) 2141, 3329, 4731
BsmI GAATGC 6 cut(s) 39, 167, 1898, 2846, 4366, 5027
BsnI GGCC 7 cut(s) 960, 1087, 2402, 2632, 3866, 4144, 5137
Bso31I GGTCTC 2 cut(s) 1829, 2321
BsoBI CYCGRG 2 cut(s) 2397, 4272
Bsp1286I GDGCHC 7 cut(s) 1123, 1674, 3228, 3735, 3810, 3970, 5059
Bsp1407I TGTACA 2 cut(s) 237, 4222
Bsp1720I GCTNAGC 1 cut(s) 4170
Bsp19I CCATGG 2 cut(s) 228, 3353
BspACI CCGC 7 cut(s) 704, 883, 2527, 3253, 4403, 4715, 5123
BspANI GGCC 7 cut(s) 960, 1087, 2402, 2632, 3866, 4144, 5137
BspCNI CTCAG 8 cut(s) 159, 415, 505, 1380, 1903, 3433, 4162, 4452
BspDI ATCGAT 1 cut(s) 5188
BspFNI CGCG 1 cut(s) 489
BspHI TCATGA 4 cut(s) 2655, 3307, 3988, 4431
BspLI GGNNCC 9 cut(s) 255, 384, 482, 1122, 1217, 1413, 2216, 3317, 4842
BspMAI CTGCAG 4 cut(s) 2059, 2911, 4759, 4902
BspMI ACCTGC 1 cut(s) 3150
BspQI GCTCTTC 1 cut(s) 3740
BspT107I GGYRCC 2 cut(s) 1120, 1215
BspTNI GGTCTC 2 cut(s) 1829, 2321
BsrDI GCAATG 2 cut(s) 365, 4425
BsrFI RCCGGY 3 cut(s) 1071, 2414, 3510
BsrGI TGTACA 2 cut(s) 237, 4222
BssAI RCCGGY 3 cut(s) 1071, 2414, 3510
BssECI CCNNGG 9 cut(s) 194, 228, 249, 266, 1403, 3353, 3664, 3723, 4667
BssNI GRCGYC 2 cut(s) 1216, 3436
BssSI CACGAG 4 cut(s) 1853, 2131, 2537, 2547
BssT1I CCWWGG 5 cut(s) 228, 1403, 3353, 3664, 4667
Bst2BI CACGAG 4 cut(s) 1853, 2131, 2537, 2547
Bst2UI CCWGG 7 cut(s) 45, 196, 267, 1416, 3724, 4081, 4392
Bst6I CTCTTC 8 cut(s) 660, 1173, 1510, 1635, 1809, 3740, 4079, 5000
BstACI GRCGYC 2 cut(s) 1216, 3436
BstAPI GCANNNNNTGC 1 cut(s) 3398
BstAUI TGTACA 2 cut(s) 237, 4222
BstBAI YACGTR 2 cut(s) 2324, 2924
BstC8I GCNNGC 4 cut(s) 1896, 2055, 2630, 4201
BstDSI CCRYGG 2 cut(s) 228, 3353
BstEII GGTNACC 2 cut(s) 138, 3846
BstFNI CGCG 1 cut(s) 489
BstH2I RGCGCY 3 cut(s) 1219, 1384, 1879
BstHHI GCGC 4 cut(s) 491, 1218, 1383, 1878
BstMAI GTCTC 5 cut(s) 1577, 1829, 2321, 2462, 2714
BstMWI GCNNNNNNNGC 7 cut(s) 1882, 1891, 2212, 2887, 3398, 4510, 4786
BstNI CCWGG 7 cut(s) 45, 196, 267, 1416, 3724, 4081, 4392
BstNSI RCATGY 5 cut(s) 739, 2797, 3214, 4079, 4309
BstPAI GACNNNNGTC 1 cut(s) 2025
BstPI GGTNACC 2 cut(s) 138, 3846
BstSCI CCNGG 9 cut(s) 43, 194, 265, 842, 1102, 1414, 3722, 4079, 4390
BstSFI CTRYAG 7 cut(s) 681, 1527, 2055, 2907, 4506, 4755, 4898
BstSLI GKGCMC 4 cut(s) 1123, 1674, 3228, 5059
BstUI CGCG 1 cut(s) 489
BstV2I GAAGAC 4 cut(s) 701, 818, 2321, 2973
BstX2I RGATCY 8 cut(s) 253, 470, 2374, 2584, 3800, 4006, 4542, 4840
BstXI CCANNNNNNTGG 1 cut(s) 4535
BstYI RGATCY 8 cut(s) 253, 470, 2374, 2584, 3800, 4006, 4542, 4840
Bsu15I ATCGAT 1 cut(s) 5188
Bsu36I CCTNAGG 1 cut(s) 4460
BsuI GTATCC 3 cut(s) 2449, 2603, 2808
BsuRI GGCC 7 cut(s) 960, 1087, 2402, 2632, 3866, 4144, 5137
BsuTUI ATCGAT 1 cut(s) 5188
BtgI CCRYGG 2 cut(s) 228, 3353
BtsI GCAGTG 3 cut(s) 2150, 2256, 5022
BveI ACCTGC 1 cut(s) 3150
Cac8I GCNNGC 4 cut(s) 1896, 2055, 2630, 4201
CciI TCATGA 4 cut(s) 2655, 3307, 3988, 4431
CfoI GCGC 4 cut(s) 491, 1218, 1383, 1878
Cfr10I RCCGGY 3 cut(s) 1071, 2414, 3510
ClaI ATCGAT 1 cut(s) 5188
CseI GACGC 4 cut(s) 1586, 2210, 3425, 4715
Csp6I GTAC 7 cut(s) 238, 520, 1003, 1163, 3565, 4210, 4223
CspAI ACCGGT 1 cut(s) 1071
CspCI CAANNNNNGTGG 2 cut(s) 1212, 1247
CviQI GTAC 7 cut(s) 238, 520, 1003, 1163, 3565, 4210, 4223
DinI GGCGCC 1 cut(s) 1217
DraIII CACNNNGTG 2 cut(s) 3245, 3383
DrdI GACNNNNNNGTC 1 cut(s) 4725
DriI GACNNNNNGTC 2 cut(s) 1542, 4306
DseDI GACNNNNNNGTC 1 cut(s) 4725
EaeI YGGCCR 2 cut(s) 2630, 4142
Eam1104I CTCTTC 8 cut(s) 660, 1173, 1510, 1635, 1809, 3740, 4079, 5000
Eam1105I GACNNNNNGTC 2 cut(s) 1542, 4306
EarI CTCTTC 8 cut(s) 660, 1173, 1510, 1635, 1809, 3740, 4079, 5000
Eco130I CCWWGG 5 cut(s) 228, 1403, 3353, 3664, 4667
Eco24I GRGCYC 2 cut(s) 3735, 3810
Eco31I GGTCTC 2 cut(s) 1829, 2321
Eco32I GATATC 3 cut(s) 358, 2567, 3945
Eco47I GGWCC 7 cut(s) 50, 480, 1100, 1622, 2417, 3316, 3508
Eco57I CTGAAG 9 cut(s) 602, 720, 821, 2315, 2967, 3241, 4531, 4709, 5114
Eco81I CCTNAGG 1 cut(s) 4460
Eco88I CYCGRG 2 cut(s) 2397, 4272
Eco91I GGTNACC 2 cut(s) 138, 3846
EcoO65I GGTNACC 2 cut(s) 138, 3846
EcoRI GAATTC 2 cut(s) 2438, 3142
EcoRII CCWGG 7 cut(s) 43, 194, 265, 1414, 3722, 4079, 4390
EcoRV GATATC 3 cut(s) 358, 2567, 3945
EcoT14I CCWWGG 5 cut(s) 228, 1403, 3353, 3664, 4667
EcoT22I ATGCAT 1 cut(s) 1302
EcoT38I GRGCYC 2 cut(s) 3735, 3810
EgeI GGCGCC 1 cut(s) 1217
EheI GGCGCC 1 cut(s) 1217
ErhI CCWWGG 5 cut(s) 228, 1403, 3353, 3664, 4667
Esp3I CGTCTC 2 cut(s) 1577, 2714
FalI AAGNNNNNCTT 8 cut(s) 693, 725, 1865, 1897, 2180, 2212, 3669, 3701
FaqI GGGAC 3 cut(s) 2141, 3329, 4731
FauI CCCGC 2 cut(s) 697, 4708
FauNDI CATATG 3 cut(s) 1627, 2123, 3526
FbaI TGATCA 2 cut(s) 1996, 5152
FblI GTMKAC 1 cut(s) 2990
FriOI GRGCYC 2 cut(s) 3735, 3810
FspBI CTAG 7 cut(s) 1556, 2496, 2643, 2859, 3156, 3896, 4158
GlaI GCGC 4 cut(s) 490, 1217, 1382, 1877
GsaI CCCAGC 2 cut(s) 306, 1187
GsuI CTGGAG 1 cut(s) 1778
HaeII RGCGCY 3 cut(s) 1219, 1384, 1879
HaeIII GGCC 7 cut(s) 960, 1087, 2402, 2632, 3866, 4144, 5137
HapII CCGG 7 cut(s) 371, 429, 844, 1072, 1103, 2415, 3511
HgaI GACGC 4 cut(s) 1586, 2210, 3425, 4715
HhaI GCGC 4 cut(s) 491, 1218, 1383, 1878
Hin1I GRCGYC 2 cut(s) 1216, 3436
Hin6I GCGC 4 cut(s) 489, 1216, 1381, 1876
HinP1I GCGC 4 cut(s) 489, 1216, 1381, 1876
HincII GTYRAC 4 cut(s) 888, 993, 2394, 3013
HindII GTYRAC 4 cut(s) 888, 993, 2394, 3013
HindIII AAGCTT 4 cut(s) 206, 893, 1739, 4914
HpaII CCGG 7 cut(s) 371, 429, 844, 1072, 1103, 2415, 3511
Hpy99I CGWCG 1 cut(s) 489
HpyCH4IV ACGT 7 cut(s) 971, 1507, 2026, 2323, 2923, 3382, 3695
HpyF10VI GCNNNNNNNGC 7 cut(s) 1882, 1891, 2212, 2887, 3398, 4510, 4786
HpySE526I ACGT 7 cut(s) 971, 1507, 2026, 2323, 2923, 3382, 3695
Hsp92I GRCGYC 2 cut(s) 1216, 3436
HspAI GCGC 4 cut(s) 489, 1216, 1381, 1876
KasI GGCGCC 1 cut(s) 1215
Ksp22I TGATCA 2 cut(s) 1996, 5152
LguI GCTCTTC 1 cut(s) 3740
LmnI GCTCC 4 cut(s) 1279, 1594, 2220, 4465
MaeI CTAG 7 cut(s) 1556, 2496, 2643, 2859, 3156, 3896, 4158
MaeII ACGT 7 cut(s) 971, 1507, 2026, 2323, 2923, 3382, 3695
MfeI CAATTG 1 cut(s) 947
MflI RGATCY 8 cut(s) 253, 470, 2374, 2584, 3800, 4006, 4542, 4840
MhlI GDGCHC 7 cut(s) 1123, 1674, 3228, 3735, 3810, 3970, 5059
MlsI TGGCCA 2 cut(s) 2632, 4144
MluNI TGGCCA 2 cut(s) 2632, 4144
Mly113I GGCGCC 1 cut(s) 1216
MmeI TCCRAC 9 cut(s) 458, 1526, 1659, 2352, 2587, 3518, 3956, 4014, 4818
Mox20I TGGCCA 2 cut(s) 2632, 4144
Mph1103I ATGCAT 1 cut(s) 1302
MroXI GAANNNNTTC 1 cut(s) 387
MscI TGGCCA 2 cut(s) 2632, 4144
Msp20I TGGCCA 2 cut(s) 2632, 4144
MspA1I CMGCKG 4 cut(s) 425, 3322, 4405, 4489
MspI CCGG 7 cut(s) 371, 429, 844, 1072, 1103, 2415, 3511
MspR9I CCNGG 9 cut(s) 45, 196, 267, 844, 1104, 1416, 3724, 4081, 4392
MunI CAATTG 1 cut(s) 947
Mva1269I GAATGC 6 cut(s) 39, 167, 1898, 2846, 4366, 5027
MvaI CCWGG 7 cut(s) 45, 196, 267, 1416, 3724, 4081, 4392
MvnI CGCG 1 cut(s) 489
MwoI GCNNNNNNNGC 7 cut(s) 1882, 1891, 2212, 2887, 3398, 4510, 4786
NarI GGCGCC 1 cut(s) 1216
NciI CCSGG 2 cut(s) 844, 1104
NcoI CCATGG 2 cut(s) 228, 3353
NdeI CATATG 3 cut(s) 1627, 2123, 3526
NlaIV GGNNCC 9 cut(s) 255, 384, 482, 1122, 1217, 1413, 2216, 3317, 4842
NmuCI GTSAC 7 cut(s) 138, 1863, 2018, 2254, 3245, 3846, 4819
NsiI ATGCAT 1 cut(s) 1302
NspI RCATGY 5 cut(s) 739, 2797, 3214, 4079, 4309
OliI CACNNNNGTG 5 cut(s) 1126, 1667, 4331, 4704, 4706
PagI TCATGA 4 cut(s) 2655, 3307, 3988, 4431
PciI ACATGT 1 cut(s) 4305
PciSI GCTCTTC 1 cut(s) 3740
PctI GAATGC 6 cut(s) 39, 167, 1898, 2846, 4366, 5027
PdmI GAANNNNTTC 1 cut(s) 387
PflMI CCANNNNNTGG 1 cut(s) 4643
PinAI ACCGGT 1 cut(s) 1071
PluTI GGCGCC 1 cut(s) 1219
Ppu21I YACGTR 2 cut(s) 2324, 2924
PscI ACATGT 1 cut(s) 4305
PshAI GACNNNNGTC 1 cut(s) 2025
PsiI TTATAA 3 cut(s) 732, 789, 2088
Psp6I CCWGG 7 cut(s) 43, 194, 265, 1414, 3722, 4079, 4390
PspEI GGTNACC 2 cut(s) 138, 3846
PspFI CCCAGC 2 cut(s) 302, 1183
PspGI CCWGG 7 cut(s) 43, 194, 265, 1414, 3722, 4079, 4390
PspN4I GGNNCC 9 cut(s) 255, 384, 482, 1122, 1217, 1413, 2216, 3317, 4842
PstI CTGCAG 4 cut(s) 2059, 2911, 4759, 4902
PsuI RGATCY 8 cut(s) 253, 470, 2374, 2584, 3800, 4006, 4542, 4840
PvuII CAGCTG 3 cut(s) 425, 3322, 4489
RsaI GTAC 7 cut(s) 239, 521, 1004, 1164, 3566, 4211, 4224
RsaNI GTAC 7 cut(s) 238, 520, 1003, 1163, 3565, 4210, 4223
SapI GCTCTTC 1 cut(s) 3740
ScaI AGTACT 1 cut(s) 4211
ScrFI CCNGG 9 cut(s) 45, 196, 267, 844, 1104, 1416, 3724, 4081, 4392
SduI GDGCHC 7 cut(s) 1123, 1674, 3228, 3735, 3810, 3970, 5059
SfcI CTRYAG 7 cut(s) 681, 1527, 2055, 2907, 4506, 4755, 4898
SfoI GGCGCC 1 cut(s) 1217
SinI GGWCC 7 cut(s) 50, 480, 1100, 1622, 2417, 3316, 3508
SmlI CTYRAG 2 cut(s) 1970, 3686
SmoI CTYRAG 2 cut(s) 1970, 3686
SsiI CCGC 7 cut(s) 704, 883, 2527, 3253, 4403, 4715, 5123
SspDI GGCGCC 1 cut(s) 1215
SspI AATATT 5 cut(s) 2003, 2242, 2357, 3912, 4987
SspMI CTAG 7 cut(s) 1556, 2496, 2643, 2859, 3156, 3896, 4158
StyD4I CCNGG 9 cut(s) 43, 194, 265, 842, 1102, 1414, 3722, 4079, 4390
StyI CCWWGG 5 cut(s) 228, 1403, 3353, 3664, 4667
TaiI ACGT 7 cut(s) 974, 1510, 2029, 2326, 2926, 3385, 3698
TaqII GACCGA 1 cut(s) 126
TatI WGTACW 3 cut(s) 237, 4209, 4222
TauI GCSGC 1 cut(s) 5125
TseFI GTSAC 7 cut(s) 138, 1863, 2018, 2254, 3245, 3846, 4819
Tsp45I GTSAC 7 cut(s) 138, 1863, 2018, 2254, 3245, 3846, 4819
TspGWI ACGGA 6 cut(s) 167, 911, 1695, 3044, 3953, 4220
Van91I CCANNNNNTGG 1 cut(s) 4643
VneI GTGCAC 2 cut(s) 1670, 5055
VpaK11BI GGWCC 7 cut(s) 50, 480, 1100, 1622, 2417, 3316, 3508
XbaI TCTAGA 1 cut(s) 2495
XceI RCATGY 5 cut(s) 739, 2797, 3214, 4079, 4309
XcmI CCANNNNNNNNNTGG 1 cut(s) 3611
XmiI GTMKAC 1 cut(s) 2990
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 7 cut(s) 1556, 2496, 2643, 2859, 3156, 3896, 4158
ZrmI AGTACT 1 cut(s) 4211
Zsp2I ATGCAT 1 cut(s) 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.