pre-mRNA-processing-splicing factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PRP8_domainIV | PF12134 | 55 - 110 | 1.4e-15 | PRP8 domain IV core |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 188 |
| AgsI | TTSAA | 5 cut(s) | 7, 34, 214, 235, 262 |
| AjiI | CACGTC | 1 cut(s) | 130 |
| AluBI | AGCT | 4 cut(s) | 25, 80, 210, 336 |
| AluI | AGCT | 4 cut(s) | 25, 80, 210, 336 |
| ApeKI | GCWGC | 2 cut(s) | 74, 77 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 26 |
| AspLEI | GCGC | 1 cut(s) | 289 |
| BbvI | GCAGC | 2 cut(s) | 86, 89 |
| BciVI | GTATCC | 1 cut(s) | 256 |
| BclI | TGATCA | 1 cut(s) | 148 |
| BfuI | GTATCC | 1 cut(s) | 256 |
| BisI | GCNGC | 3 cut(s) | 75, 78, 188 |
| BlsI | GCNGC | 3 cut(s) | 76, 79, 189 |
| BmgBI | CACGTC | 1 cut(s) | 130 |
| BsaBI | GATNNNNATC | 1 cut(s) | 41 |
| BsaWI | WCCGGW | 1 cut(s) | 264 |
| Bse1I | ACTGG | 1 cut(s) | 95 |
| Bse8I | GATNNNNATC | 1 cut(s) | 41 |
| BseGI | GGATG | 3 cut(s) | 42, 106, 160 |
| BseJI | GATNNNNATC | 1 cut(s) | 41 |
| BseNI | ACTGG | 1 cut(s) | 95 |
| BseXI | GCAGC | 2 cut(s) | 86, 89 |
| BsiSI | CCGG | 1 cut(s) | 265 |
| BslFI | GGGAC | 1 cut(s) | 312 |
| BsmFI | GGGAC | 1 cut(s) | 312 |
| BsmI | GAATGC | 1 cut(s) | 147 |
| Bsp143I | GATC | 2 cut(s) | 36, 148 |
| BspACI | CCGC | 1 cut(s) | 188 |
| BsrI | ACTGG | 1 cut(s) | 95 |
| BssMI | GATC | 2 cut(s) | 36, 148 |
| Bst4CI | ACNGT | 1 cut(s) | 326 |
| Bst6I | CTCTTC | 1 cut(s) | 230 |
| BstF5I | GGATG | 3 cut(s) | 42, 106, 160 |
| BstHHI | GCGC | 1 cut(s) | 289 |
| BstKTI | GATC | 2 cut(s) | 39, 151 |
| BstMBI | GATC | 2 cut(s) | 36, 148 |
| BstV1I | GCAGC | 2 cut(s) | 86, 89 |
| BsuI | GTATCC | 1 cut(s) | 256 |
| BtrI | CACGTC | 1 cut(s) | 130 |
| BtsCI | GGATG | 3 cut(s) | 42, 106, 160 |
| BtsI | GCAGTG | 2 cut(s) | 48, 252 |
| BtsIMutI | CAGTG | 2 cut(s) | 48, 252 |
| CfoI | GCGC | 1 cut(s) | 289 |
| CviJI | RGCY | 5 cut(s) | 25, 80, 187, 210, 336 |
| CviKI_1 | RGCY | 5 cut(s) | 25, 80, 187, 210, 336 |
| DpnI | GATC | 2 cut(s) | 38, 150 |
| DpnII | GATC | 2 cut(s) | 36, 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 230 |
| EarI | CTCTTC | 1 cut(s) | 230 |
| FaiI | YATR | 4 cut(s) | 59, 165, 222, 322 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 14, 46, 104, 136 |
| FaqI | GGGAC | 1 cut(s) | 312 |
| FbaI | TGATCA | 1 cut(s) | 148 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 78, 188 |
| FokI | GGATG | 3 cut(s) | 29, 93, 167 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 78, 188 |
| GlaI | GCGC | 1 cut(s) | 288 |
| GluI | GCNGC | 3 cut(s) | 75, 78, 188 |
| HapII | CCGG | 1 cut(s) | 265 |
| HhaI | GCGC | 1 cut(s) | 289 |
| Hin6I | GCGC | 1 cut(s) | 287 |
| HinP1I | GCGC | 1 cut(s) | 287 |
| HinfI | GANTC | 1 cut(s) | 277 |
| HpaII | CCGG | 1 cut(s) | 265 |
| Hpy166II | GTNNAC | 2 cut(s) | 127, 298 |
| Hpy188I | TCNGA | 2 cut(s) | 12, 276 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 152 |
| Hpy8I | GTNNAC | 2 cut(s) | 127, 298 |
| HpyAV | CCTTC | 1 cut(s) | 301 |
| HpyCH4III | ACNGT | 1 cut(s) | 326 |
| HpyCH4IV | ACGT | 1 cut(s) | 129 |
| HpySE526I | ACGT | 1 cut(s) | 129 |
| HspAI | GCGC | 1 cut(s) | 287 |
| Ksp22I | TGATCA | 1 cut(s) | 148 |
| Kzo9I | GATC | 2 cut(s) | 36, 148 |
| LpnPI | CCDG | 4 cut(s) | 108, 137, 176, 278 |
| Lsp1109I | GCAGC | 2 cut(s) | 86, 89 |
| MaeII | ACGT | 1 cut(s) | 129 |
| MaeIII | GTNAC | 2 cut(s) | 90, 134 |
| MalI | GATC | 2 cut(s) | 38, 150 |
| MboI | GATC | 2 cut(s) | 36, 148 |
| MboII | GAAGA | 3 cut(s) | 46, 247, 272 |
| MluCI | AATT | 2 cut(s) | 199, 240 |
| MmeI | TCCRAC | 1 cut(s) | 79 |
| MnlI | CCTC | 3 cut(s) | 61, 171, 187 |
| MroXI | GAANNNNTTC | 1 cut(s) | 26 |
| MseI | TTAA | 1 cut(s) | 198 |
| MspI | CCGG | 1 cut(s) | 265 |
| Mva1269I | GAATGC | 1 cut(s) | 147 |
| NdeII | GATC | 2 cut(s) | 36, 148 |
| PctI | GAATGC | 1 cut(s) | 147 |
| PdmI | GAANNNNTTC | 1 cut(s) | 26 |
| PfeI | GAWTC | 1 cut(s) | 277 |
| PkrI | GCNGC | 3 cut(s) | 76, 79, 189 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| SatI | GCNGC | 3 cut(s) | 75, 78, 188 |
| Sau3AI | GATC | 2 cut(s) | 36, 148 |
| SetI | ASST | 7 cut(s) | 27, 72, 82, 132, 198, 212, 338 |
| Sse9I | AATT | 2 cut(s) | 199, 240 |
| SsiI | CCGC | 1 cut(s) | 188 |
| TaaI | ACNGT | 1 cut(s) | 326 |
| TaiI | ACGT | 1 cut(s) | 132 |
| TasI | AATT | 2 cut(s) | 199, 240 |
| TauI | GCSGC | 1 cut(s) | 190 |
| TfiI | GAWTC | 1 cut(s) | 277 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TscAI | CASTG | 2 cut(s) | 55, 259 |
| TseI | GCWGC | 2 cut(s) | 74, 77 |
| TspGWI | ACGGA | 1 cut(s) | 153 |
| TspRI | CASTG | 2 cut(s) | 55, 259 |
| XmnI | GAANNNNTTC | 1 cut(s) | 26 |