pre-mRNA-processing-splicing factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PRO8NT | PF08082 | 68 - 219 | 4.3e-85 | PRO8NT (NUC069), PrP8 N-terminal domain |
| PROCN | PF08083 | 405 - 810 | 1.1e-235 | PROCN (NUC071) domain |
| RRM_4 | PF10598 | 995 - 1085 | 1.4e-46 | RNA recognition motif of the spliceosomal PrP8 |
| U5_2-snRNA_bdg | PF10597 | 1247 - 1382 | 4.1e-75 | U5-snRNA binding site 2 of PrP8 |
| U6-snRNA_bdg | PF10596 | 1452 - 1610 | 8.7e-89 | U6-snRNA interacting domain of PrP8 |
| PRP8_domainIV | PF12134 | 1770 - 1999 | 2.6e-129 | PRP8 domain IV core |
| JAB | PF01398 | 2110 - 2209 | 1.1e-11 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease |
| PROCT | PF08084 | 2222 - 2342 | 2.3e-48 | PROCT (NUC072) domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1530, 1587, 2886 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 3260, 5523 |
| Acc36I | ACCTGC | 3 cut(s) | 355, 1078, 6683 |
| Acc65I | GGTACC | 1 cut(s) | 2209 |
| AccB1I | GGYRCC | 4 cut(s) | 1918, 2013, 2209, 4233 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 35, 5441, 5471, 6645 |
| AccBSI | CCGCTC | 1 cut(s) | 5266 |
| AccI | GTMKAC | 2 cut(s) | 505, 3788 |
| AccII | CGCG | 2 cut(s) | 65, 288 |
| AclI | AACGTT | 1 cut(s) | 5062 |
| AcoI | YGGCCR | 6 cut(s) | 13, 1783, 3428, 4940, 5538, 6959 |
| AcuI | CTGAAG | 9 cut(s) | 1518, 1619, 1871, 2399, 2942, 3113, 5192, 5280, 5507 |
| AcyI | GRCGYC | 3 cut(s) | 1919, 2014, 4234 |
| AflII | CTTAAG | 1 cut(s) | 5720 |
| AflIII | ACRYGT | 4 cut(s) | 255, 286, 3721, 5103 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 808, 2340, 5104 |
| AhlI | ACTAGT | 2 cut(s) | 3892, 6206 |
| AjiI | CACGTC | 1 cut(s) | 1127 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1700, 1732, 4613, 4645 |
| AleI | CACNNNNGTG | 6 cut(s) | 4639, 4771, 5129, 5502, 6478, 7007 |
| Alw21I | GWGCWC | 6 cut(s) | 120, 304, 3315, 4768, 5655, 5857 |
| Alw26I | GTCTC | 7 cut(s) | 188, 237, 2584, 3260, 3512, 4535, 4844 |
| Alw44I | GTGCAC | 4 cut(s) | 3311, 4764, 5651, 5853 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 35, 1226 |
| Ama87I | CYCGRG | 6 cut(s) | 338, 3195, 3345, 5070, 6521, 6974 |
| ApaLI | GTGCAC | 4 cut(s) | 3311, 4764, 5651, 5853 |
| AseI | ATTAAT | 2 cut(s) | 4656, 5439 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 269, 1185, 4869, 6368 |
| Asp718I | GGTACC | 1 cut(s) | 2209 |
| AspLEI | GCGC | 5 cut(s) | 177, 1921, 2016, 2676, 4236 |
| AsuC2I | CCSGG | 3 cut(s) | 1642, 3271, 3854 |
| AvaI | CYCGRG | 6 cut(s) | 338, 3195, 3345, 5070, 6521, 6974 |
| AxyI | CCTNAGG | 3 cut(s) | 2121, 6441, 6600 |
| BaeGI | GKGCMC | 4 cut(s) | 3315, 4768, 5655, 5857 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 275, 308, 857, 890, 5367, 5400, 5892, 5925 |
| BalI | TGGCCA | 4 cut(s) | 1785, 3430, 4942, 5540 |
| BamHI | GGATCC | 1 cut(s) | 1057 |
| BanI | GGYRCC | 4 cut(s) | 1918, 2013, 2209, 4233 |
| BanII | GRGCYC | 1 cut(s) | 4608 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 371, 403, 2305, 2337, 3849, 3881 |
| BauI | CACGAG | 1 cut(s) | 2929 |
| BbsI | GAAGAC | 3 cut(s) | 627, 1499, 3119 |
| Bbv12I | GWGCWC | 6 cut(s) | 120, 304, 3315, 4768, 5655, 5857 |
| BbvCI | CCTCAGC | 1 cut(s) | 6588 |
| BceAI | ACGGC | 5 cut(s) | 28, 98, 1269, 1653, 2015 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 614, 648, 1427, 1461, 2449, 2483, 6157, 6191 |
| BciVI | GTATCC | 2 cut(s) | 3606, 5262 |
| BclI | TGATCA | 4 cut(s) | 2794, 3031, 4987, 5950 |
| BcnI | CCSGG | 3 cut(s) | 1642, 3271, 3854 |
| BcoDI | GTCTC | 7 cut(s) | 188, 237, 2584, 3260, 3512, 4535, 4844 |
| BcuI | ACTAGT | 2 cut(s) | 3892, 6206 |
| BfaI | CTAG | 9 cut(s) | 296, 593, 668, 3023, 3893, 3954, 4956, 6162, 6207 |
| BfmI | CTRYAG | 9 cut(s) | 1479, 1760, 2322, 2853, 3705, 4438, 5304, 5696, 6676 |
| BfoI | RGCGCY | 4 cut(s) | 1922, 2017, 2677, 4237 |
| BfrI | CTTAAG | 1 cut(s) | 5720 |
| BfuAI | ACCTGC | 3 cut(s) | 355, 1078, 6683 |
| BfuI | GTATCC | 2 cut(s) | 3606, 5262 |
| BglII | AGATCT | 7 cut(s) | 1268, 1674, 1846, 4598, 4696, 5983, 6624 |
| BlpI | GCTNAGC | 1 cut(s) | 69 |
| BmcAI | AGTACT | 2 cut(s) | 5009, 6941 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 808, 2340, 5104 |
| BmeT110I | CYCGRG | 6 cut(s) | 338, 3195, 3345, 5070, 6521, 6974 |
| BmgBI | CACGTC | 1 cut(s) | 1127 |
| BmrI | ACTGGG | 3 cut(s) | 408, 4713, 5481 |
| BmuI | ACTGGG | 3 cut(s) | 408, 4713, 5481 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2823 |
| BpiI | GAAGAC | 3 cut(s) | 627, 1499, 3119 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1183, 1215, 1221, 1253 |
| BpmI | CTGGAG | 4 cut(s) | 629, 1248, 2576, 5666 |
| Bpu10I | CCTNAGC | 2 cut(s) | 219, 6588 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 69 |
| BpuEI | CTTGAG | 2 cut(s) | 2789, 4203 |
| BpuMI | CCSGG | 3 cut(s) | 1642, 3271, 3854 |
| Bsa29I | ATCGAT | 1 cut(s) | 4565 |
| BsaAI | YACGTR | 1 cut(s) | 3722 |
| BsaBI | GATNNNNATC | 5 cut(s) | 585, 1062, 2787, 2799, 3468 |
| BsaHI | GRCGYC | 3 cut(s) | 1919, 2014, 4234 |
| BsaI | GGTCTC | 3 cut(s) | 237, 3260, 4535 |
| BsaWI | WCCGGW | 1 cut(s) | 702 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 4330, 4360 |
| Bse118I | RCCGGY | 2 cut(s) | 744, 6957 |
| Bse21I | CCTNAGG | 3 cut(s) | 2121, 6441, 6600 |
| Bse3DI | GCAATG | 3 cut(s) | 5223, 6462, 6650 |
| Bse8I | GATNNNNATC | 5 cut(s) | 585, 1062, 2787, 2799, 3468 |
| BseCI | ATCGAT | 1 cut(s) | 4565 |
| BseJI | GATNNNNATC | 5 cut(s) | 585, 1062, 2787, 2799, 3468 |
| BseMI | GCAATG | 3 cut(s) | 5223, 6462, 6650 |
| BseRI | GAGGAG | 4 cut(s) | 2453, 6072, 6588, 7007 |
| BseSI | GKGCMC | 4 cut(s) | 3315, 4768, 5655, 5857 |
| BseYI | CCCAGC | 2 cut(s) | 1106, 4176 |
| BsgI | GTGCAG | 4 cut(s) | 1308, 4709, 4877, 5553 |
| Bsh1236I | CGCG | 2 cut(s) | 65, 288 |
| BshNI | GGYRCC | 4 cut(s) | 1918, 2013, 2209, 4233 |
| BshVI | ATCGAT | 1 cut(s) | 4565 |
| BsiHKAI | GWGCWC | 6 cut(s) | 120, 304, 3315, 4768, 5655, 5857 |
| BsiHKCI | CYCGRG | 6 cut(s) | 338, 3195, 3345, 5070, 6521, 6974 |
| BsiSI | CCGG | 7 cut(s) | 98, 703, 745, 1642, 3271, 3853, 6958 |
| BslFI | GGGAC | 7 cut(s) | 266, 1624, 1896, 2939, 3266, 6756, 6940 |
| BsmAI | GTCTC | 7 cut(s) | 188, 237, 2584, 3260, 3512, 4535, 4844 |
| BsmBI | CGTCTC | 2 cut(s) | 188, 3512 |
| BsmFI | GGGAC | 7 cut(s) | 266, 1624, 1896, 2939, 3266, 6756, 6940 |
| BsmI | GAATGC | 5 cut(s) | 525, 843, 3644, 5637, 5825 |
| Bso31I | GGTCTC | 3 cut(s) | 237, 3260, 4535 |
| BsoBI | CYCGRG | 6 cut(s) | 338, 3195, 3345, 5070, 6521, 6974 |
| Bsp1286I | GDGCHC | 7 cut(s) | 120, 304, 3315, 4608, 4768, 5655, 5857 |
| Bsp1407I | TGTACA | 5 cut(s) | 1041, 2730, 3148, 3865, 5020 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 69 |
| Bsp19I | CCATGG | 3 cut(s) | 247, 1032, 6863 |
| BspDI | ATCGAT | 1 cut(s) | 4565 |
| BspFNI | CGCG | 2 cut(s) | 65, 288 |
| BspHI | TCATGA | 4 cut(s) | 3334, 3453, 4105, 6946 |
| BspMAI | CTGCAG | 4 cut(s) | 2857, 3709, 5700, 6680 |
| BspMI | ACCTGC | 3 cut(s) | 355, 1078, 6683 |
| BspQI | GCTCTTC | 3 cut(s) | 2607, 5589, 6522 |
| BspT107I | GGYRCC | 4 cut(s) | 1918, 2013, 2209, 4233 |
| BspTI | CTTAAG | 1 cut(s) | 5720 |
| BspTNI | GGTCTC | 3 cut(s) | 237, 3260, 4535 |
| BsrBI | CCGCTC | 1 cut(s) | 5266 |
| BsrDI | GCAATG | 3 cut(s) | 5223, 6462, 6650 |
| BsrFI | RCCGGY | 2 cut(s) | 744, 6957 |
| BsrGI | TGTACA | 5 cut(s) | 1041, 2730, 3148, 3865, 5020 |
| BssAI | RCCGGY | 2 cut(s) | 744, 6957 |
| BssNI | GRCGYC | 3 cut(s) | 1919, 2014, 4234 |
| BssSI | CACGAG | 1 cut(s) | 2929 |
| BssT1I | CCWWGG | 9 cut(s) | 247, 428, 1032, 1419, 2201, 4151, 5465, 6832, 6863 |
| Bst2BI | CACGAG | 1 cut(s) | 2929 |
| BstACI | GRCGYC | 3 cut(s) | 1919, 2014, 4234 |
| BstAFI | CTTAAG | 1 cut(s) | 5720 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4196 |
| BstAUI | TGTACA | 5 cut(s) | 1041, 2730, 3148, 3865, 5020 |
| BstBAI | YACGTR | 1 cut(s) | 3722 |
| BstDSI | CCRYGG | 4 cut(s) | 63, 247, 1032, 6863 |
| BstEII | GGTNACC | 2 cut(s) | 942, 6779 |
| BstFNI | CGCG | 2 cut(s) | 65, 288 |
| BstH2I | RGCGCY | 4 cut(s) | 1922, 2017, 2677, 4237 |
| BstHHI | GCGC | 5 cut(s) | 177, 1921, 2016, 2676, 4236 |
| BstMAI | GTCTC | 7 cut(s) | 188, 237, 2584, 3260, 3512, 4535, 4844 |
| BstNSI | RCATGY | 7 cut(s) | 214, 227, 259, 323, 1537, 3595, 5107 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2823 |
| BstPI | GGTNACC | 2 cut(s) | 942, 6779 |
| BstSFI | CTRYAG | 9 cut(s) | 1479, 1760, 2322, 2853, 3705, 4438, 5304, 5696, 6676 |
| BstSLI | GKGCMC | 4 cut(s) | 3315, 4768, 5655, 5857 |
| BstUI | CGCG | 2 cut(s) | 65, 288 |
| BstV2I | GAAGAC | 3 cut(s) | 627, 1499, 3119 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 357, 398, 1793, 5083, 5333, 6480 |
| Bsu15I | ATCGAT | 1 cut(s) | 4565 |
| Bsu36I | CCTNAGG | 3 cut(s) | 2121, 6441, 6600 |
| BsuI | GTATCC | 2 cut(s) | 3606, 5262 |
| BsuTUI | ATCGAT | 1 cut(s) | 4565 |
| BtgI | CCRYGG | 4 cut(s) | 63, 247, 1032, 6863 |
| BtgZI | GCGATG | 1 cut(s) | 2129 |
| BtrI | CACGTC | 1 cut(s) | 1127 |
| BtsI | GCAGTG | 4 cut(s) | 2948, 3054, 5201, 6485 |
| BveI | ACCTGC | 3 cut(s) | 355, 1078, 6683 |
| CaiI | CAGNNNCTG | 2 cut(s) | 35, 1226 |
| CciI | TCATGA | 4 cut(s) | 3334, 3453, 4105, 6946 |
| CfoI | GCGC | 5 cut(s) | 177, 1921, 2016, 2676, 4236 |
| Cfr10I | RCCGGY | 2 cut(s) | 744, 6957 |
| Cfr42I | CCGCGG | 1 cut(s) | 66 |
| ClaI | ATCGAT | 1 cut(s) | 4565 |
| CseI | GACGC | 3 cut(s) | 205, 1814, 5513 |
| CsiI | ACCWGGT | 2 cut(s) | 2212, 4365 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2010, 2045 |
| DinI | GGCGCC | 3 cut(s) | 1920, 2015, 4235 |
| DraI | TTTAAA | 2 cut(s) | 514, 4501 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 3260, 5523 |
| DriI | GACNNNNNGTC | 3 cut(s) | 808, 2340, 5104 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 3260, 5523 |
| EaeI | YGGCCR | 6 cut(s) | 13, 1783, 3428, 4940, 5538, 6959 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 808, 2340, 5104 |
| EciI | GGCGGA | 3 cut(s) | 42, 1291, 4982 |
| Eco130I | CCWWGG | 9 cut(s) | 247, 428, 1032, 1419, 2201, 4151, 5465, 6832, 6863 |
| Eco24I | GRGCYC | 1 cut(s) | 4608 |
| Eco31I | GGTCTC | 3 cut(s) | 237, 3260, 4535 |
| Eco32I | GATATC | 3 cut(s) | 3365, 4743, 6058 |
| Eco57I | CTGAAG | 9 cut(s) | 1518, 1619, 1871, 2399, 2942, 3113, 5192, 5280, 5507 |
| Eco81I | CCTNAGG | 3 cut(s) | 2121, 6441, 6600 |
| Eco88I | CYCGRG | 6 cut(s) | 338, 3195, 3345, 5070, 6521, 6974 |
| Eco91I | GGTNACC | 2 cut(s) | 942, 6779 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1898 |
| EcoO65I | GGTNACC | 2 cut(s) | 942, 6779 |
| EcoRI | GAATTC | 3 cut(s) | 4163, 4275, 6307 |
| EcoRV | GATATC | 3 cut(s) | 3365, 4743, 6058 |
| EcoT14I | CCWWGG | 9 cut(s) | 247, 428, 1032, 1419, 2201, 4151, 5465, 6832, 6863 |
| EcoT22I | ATGCAT | 3 cut(s) | 2100, 2788, 4719 |
| EcoT38I | GRGCYC | 1 cut(s) | 4608 |
| EgeI | GGCGCC | 3 cut(s) | 1920, 2015, 4235 |
| EheI | GGCGCC | 3 cut(s) | 1920, 2015, 4235 |
| ErhI | CCWWGG | 9 cut(s) | 247, 428, 1032, 1419, 2201, 4151, 5465, 6832, 6863 |
| Esp3I | CGTCTC | 2 cut(s) | 188, 3512 |
| FaqI | GGGAC | 7 cut(s) | 266, 1624, 1896, 2939, 3266, 6756, 6940 |
| FauI | CCCGC | 7 cut(s) | 70, 1350, 1495, 2655, 3929, 4173, 5253 |
| FauNDI | CATATG | 2 cut(s) | 2425, 4324 |
| FbaI | TGATCA | 4 cut(s) | 2794, 3031, 4987, 5950 |
| FblI | GTMKAC | 2 cut(s) | 505, 3788 |
| FriOI | GRGCYC | 1 cut(s) | 4608 |
| FspBI | CTAG | 9 cut(s) | 296, 593, 668, 3023, 3893, 3954, 4956, 6162, 6207 |
| GlaI | GCGC | 5 cut(s) | 176, 1920, 2015, 2675, 4235 |
| GsaI | CCCAGC | 2 cut(s) | 1110, 4180 |
| GsuI | CTGGAG | 4 cut(s) | 629, 1248, 2576, 5666 |
| HaeII | RGCGCY | 4 cut(s) | 1922, 2017, 2677, 4237 |
| HapII | CCGG | 7 cut(s) | 98, 703, 745, 1642, 3271, 3853, 6958 |
| HgaI | GACGC | 3 cut(s) | 205, 1814, 5513 |
| HhaI | GCGC | 5 cut(s) | 177, 1921, 2016, 2676, 4236 |
| Hin1I | GRCGYC | 3 cut(s) | 1919, 2014, 4234 |
| Hin6I | GCGC | 5 cut(s) | 175, 1919, 2014, 2674, 4234 |
| HinP1I | GCGC | 5 cut(s) | 175, 1919, 2014, 2674, 4234 |
| HincII | GTYRAC | 6 cut(s) | 506, 1686, 1791, 3811, 6705, 6751 |
| HindII | GTYRAC | 6 cut(s) | 506, 1686, 1791, 3811, 6705, 6751 |
| HindIII | AAGCTT | 2 cut(s) | 332, 6920 |
| HpaI | GTTAAC | 1 cut(s) | 6705 |
| HpaII | CCGG | 7 cut(s) | 98, 703, 745, 1642, 3271, 3853, 6958 |
| Hpy99I | CGWCG | 4 cut(s) | 49, 507, 1128, 6172 |
| HpyCH4IV | ACGT | 8 cut(s) | 1126, 2305, 2824, 3019, 3721, 5062, 5253, 6018 |
| HpySE526I | ACGT | 8 cut(s) | 1126, 2305, 2824, 3019, 3721, 5062, 5253, 6018 |
| Hsp92I | GRCGYC | 3 cut(s) | 1919, 2014, 4234 |
| HspAI | GCGC | 5 cut(s) | 175, 1919, 2014, 2674, 4234 |
| KasI | GGCGCC | 3 cut(s) | 1918, 2013, 4233 |
| KpnI | GGTACC | 1 cut(s) | 2213 |
| Ksp22I | TGATCA | 4 cut(s) | 2794, 3031, 4987, 5950 |
| KspAI | GTTAAC | 1 cut(s) | 6705 |
| KspI | CCGCGG | 1 cut(s) | 66 |
| LguI | GCTCTTC | 3 cut(s) | 2607, 5589, 6522 |
| MabI | ACCWGGT | 2 cut(s) | 2212, 4365 |
| MaeI | CTAG | 9 cut(s) | 296, 593, 668, 3023, 3893, 3954, 4956, 6162, 6207 |
| MaeII | ACGT | 8 cut(s) | 1126, 2305, 2824, 3019, 3721, 5062, 5253, 6018 |
| MbiI | CCGCTC | 1 cut(s) | 5266 |
| MfeI | CAATTG | 1 cut(s) | 1745 |
| MhlI | GDGCHC | 7 cut(s) | 120, 304, 3315, 4608, 4768, 5655, 5857 |
| MlsI | TGGCCA | 4 cut(s) | 1785, 3430, 4942, 5540 |
| MluI | ACGCGT | 1 cut(s) | 286 |
| MluNI | TGGCCA | 4 cut(s) | 1785, 3430, 4942, 5540 |
| Mly113I | GGCGCC | 3 cut(s) | 1919, 2014, 4234 |
| MlyI | GAGTC | 7 cut(s) | 818, 1273, 2489, 3103, 3187, 4111, 5614 |
| MmeI | TCCRAC | 7 cut(s) | 594, 2324, 2457, 3150, 4754, 5640, 6533 |
| Mox20I | TGGCCA | 4 cut(s) | 1785, 3430, 4942, 5540 |
| Mph1103I | ATGCAT | 3 cut(s) | 2100, 2788, 4719 |
| MroXI | GAANNNNTTC | 4 cut(s) | 269, 1185, 4869, 6368 |
| MscI | TGGCCA | 4 cut(s) | 1785, 3430, 4942, 5540 |
| Msp20I | TGGCCA | 4 cut(s) | 1785, 3430, 4942, 5540 |
| MspA1I | CMGCKG | 7 cut(s) | 65, 1226, 4120, 4180, 5479, 5644, 6145 |
| MspCI | CTTAAG | 1 cut(s) | 5720 |
| MspI | CCGG | 7 cut(s) | 98, 703, 745, 1642, 3271, 3853, 6958 |
| MunI | CAATTG | 1 cut(s) | 1745 |
| Mva1269I | GAATGC | 5 cut(s) | 525, 843, 3644, 5637, 5825 |
| MvnI | CGCG | 2 cut(s) | 65, 288 |
| NarI | GGCGCC | 3 cut(s) | 1919, 2014, 4234 |
| NciI | CCSGG | 3 cut(s) | 1642, 3271, 3854 |
| NcoI | CCATGG | 3 cut(s) | 247, 1032, 6863 |
| NdeI | CATATG | 2 cut(s) | 2425, 4324 |
| NmeAIII | GCCGAG | 2 cut(s) | 133, 5812 |
| NsiI | ATGCAT | 3 cut(s) | 2100, 2788, 4719 |
| NspI | RCATGY | 7 cut(s) | 214, 227, 259, 323, 1537, 3595, 5107 |
| OliI | CACNNNNGTG | 6 cut(s) | 4639, 4771, 5129, 5502, 6478, 7007 |
| PaeI | GCATGC | 1 cut(s) | 323 |
| PaeR7I | CTCGAG | 3 cut(s) | 338, 3195, 6974 |
| PagI | TCATGA | 4 cut(s) | 3334, 3453, 4105, 6946 |
| PasI | CCCWGGG | 1 cut(s) | 357 |
| PciI | ACATGT | 2 cut(s) | 255, 5103 |
| PciSI | GCTCTTC | 3 cut(s) | 2607, 5589, 6522 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 285, 5068 |
| PctI | GAATGC | 5 cut(s) | 525, 843, 3644, 5637, 5825 |
| PdmI | GAANNNNTTC | 4 cut(s) | 269, 1185, 4869, 6368 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 35, 5441, 5471, 6645 |
| PfoI | TCCNGGA | 1 cut(s) | 3852 |
| PleI | GAGTC | 7 cut(s) | 817, 1273, 2488, 3102, 3187, 4110, 5614 |
| PluTI | GGCGCC | 3 cut(s) | 1922, 2017, 4237 |
| PpsI | GAGTC | 7 cut(s) | 817, 1273, 2488, 3102, 3187, 4110, 5614 |
| Ppu21I | YACGTR | 1 cut(s) | 3722 |
| PscI | ACATGT | 2 cut(s) | 255, 5103 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2823 |
| PshBI | ATTAAT | 2 cut(s) | 4656, 5439 |
| PsiI | TTATAA | 3 cut(s) | 1530, 1587, 2886 |
| Psp1406I | AACGTT | 1 cut(s) | 5062 |
| PspEI | GGTNACC | 2 cut(s) | 942, 6779 |
| PspFI | CCCAGC | 2 cut(s) | 1106, 4176 |
| PspXI | VCTCGAGB | 2 cut(s) | 3195, 6974 |
| PstI | CTGCAG | 4 cut(s) | 2857, 3709, 5700, 6680 |
| PstNI | CAGNNNCTG | 2 cut(s) | 35, 1226 |
| PvuII | CAGCTG | 4 cut(s) | 1226, 4120, 5479, 6145 |
| SacII | CCGCGG | 1 cut(s) | 66 |
| SalI | GTCGAC | 1 cut(s) | 504 |
| SapI | GCTCTTC | 3 cut(s) | 2607, 5589, 6522 |
| ScaI | AGTACT | 2 cut(s) | 5009, 6941 |
| SchI | GAGTC | 7 cut(s) | 818, 1273, 2489, 3103, 3187, 4111, 5614 |
| SduI | GDGCHC | 7 cut(s) | 120, 304, 3315, 4608, 4768, 5655, 5857 |
| SexAI | ACCWGGT | 2 cut(s) | 2212, 4365 |
| SfcI | CTRYAG | 9 cut(s) | 1479, 1760, 2322, 2853, 3705, 4438, 5304, 5696, 6676 |
| SfoI | GGCGCC | 3 cut(s) | 1920, 2015, 4235 |
| Sfr274I | CTCGAG | 3 cut(s) | 338, 3195, 6974 |
| Sfr303I | CCGCGG | 1 cut(s) | 66 |
| SgrBI | CCGCGG | 1 cut(s) | 66 |
| SlaI | CTCGAG | 3 cut(s) | 338, 3195, 6974 |
| SmlI | CTYRAG | 6 cut(s) | 338, 2768, 3195, 4218, 5720, 6974 |
| SmoI | CTYRAG | 6 cut(s) | 338, 2768, 3195, 4218, 5720, 6974 |
| SpeI | ACTAGT | 2 cut(s) | 3892, 6206 |
| SphI | GCATGC | 1 cut(s) | 323 |
| SspDI | GGCGCC | 3 cut(s) | 1918, 2013, 4233 |
| SspI | AATATT | 2 cut(s) | 2197, 4758 |
| SspMI | CTAG | 9 cut(s) | 296, 593, 668, 3023, 3893, 3954, 4956, 6162, 6207 |
| StyI | CCWWGG | 9 cut(s) | 247, 428, 1032, 1419, 2201, 4151, 5465, 6832, 6863 |
| TaiI | ACGT | 8 cut(s) | 1129, 2308, 2827, 3022, 3724, 5065, 5256, 6021 |
| TaqII | GACCGA | 2 cut(s) | 930, 6257 |
| TauI | GCSGC | 3 cut(s) | 28, 68, 94 |
| TspGWI | ACGGA | 8 cut(s) | 263, 359, 1326, 1709, 2502, 4428, 4751, 5287 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 35, 5441, 5471, 6645 |
| Vha464I | CTTAAG | 1 cut(s) | 5720 |
| VneI | GTGCAC | 4 cut(s) | 3311, 4764, 5651, 5853 |
| VspI | ATTAAT | 2 cut(s) | 4656, 5439 |
| XbaI | TCTAGA | 1 cut(s) | 592 |
| XceI | RCATGY | 7 cut(s) | 214, 227, 259, 323, 1537, 3595, 5107 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5928 |
| XhoI | CTCGAG | 3 cut(s) | 338, 3195, 6974 |
| XmiI | GTMKAC | 2 cut(s) | 505, 3788 |
| XmnI | GAANNNNTTC | 4 cut(s) | 269, 1185, 4869, 6368 |
| XspI | CTAG | 9 cut(s) | 296, 593, 668, 3023, 3893, 3954, 4956, 6162, 6207 |
| ZrmI | AGTACT | 2 cut(s) | 5009, 6941 |
| Zsp2I | ATGCAT | 3 cut(s) | 2100, 2788, 4719 |