RLG00000021231

pre-mRNA-processing-splicing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000798
Physical Location & Seq
Forward (+)
73135510 .. 73137615
2106 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021231

Sequence Viewer

Length: 2106 bp
ATGTCGAAACCTAGTCTTGTGGCTGAGCCGAAGGATGAGTATGATAAAAAAACAAGGAACAAGTACTGGATAGACGTGCAGCTCCGTTGGGGGGATTATGATTCTCATGATATTGAACGTTACACCCGGGCAAAGTTTATGGACTATACAACTGATAACATGTCTATCTATCCTTCTCCGACGGGAGTGATGATTGGTATTGATTTAGCCTATAATGTGCATTCTGCATTTGGTAACTGGTTTCCCGGATCAAAACCACTGATTCAACAGGCAATGAACAAGATCATGAAGTCAAATCCGGCTTTATATGTGTTGAGGGAGCGCATAAGGAAAGGATTGCAGTTGTATTCCTCGGAGCCTACAGAGCCATATTTGTCTTCCCAAAACTATGGGGAGCTCTTCAGCAATCAAATTAAATGGTTTGTTGACGATACAAATGTGTATCGTGTTACAATGCACAAGACTTTTGACGGAAATCTTGTTACAAAACCCATCAATGGTGCTATCTTCATGTTCAATCCAGGGACCGGGCAGCTGTTCTTGAAGGTTATCCACACAAGTGTGTGGGCAGGACAGAAGCGACTTGGGCAGTTGGCTAAATGGAAAACTGCAGAAGAAGTTGCTGCTCTTGTGCGTTCTCTACCTGTTGAAGAACAGCTAAAGCAAATTATTGTGACTCGTAAGGGAATGCTAGACCCATTGGAGGTTCATTTGCTGGATTTTCCCAACATAGTCATAAAAGGAAGTGAGCTACAGCTTCCTTTTCAGGTTTGCTTGAAAATTGAGAAGTTGAATGATCTGGTACTAAAGGCTACTGAGCCACAGATGGTTCTTTTTAATGTTTACGATGATTGGTTGAAGAGTGTTTTATCATACACTGCATTCTCTCGGCTCATTCTGATTCTTCGGGCGCTACATGTGAACAGAGACAAGGCAAGTATGTTGTTGAAGCCTGACCGAACAGTCATTAGTGAGCCACACCACATTTGGCCTTCTCTTTCTGATGAGCAATGGATGAAGGTTGAGCGTGCTCTAACAGATCTTATACTGTCAGACTATGTGAAAAAGAATAATGTGAGTACTTCAGCCCTCACACAGTTTGAAATTCGTGATATAATACTTGGAGCAGAGATTACTCCACCTTCTCAACAGAGGCAAGAGATAGCAGAGATTGAGAAACAGGCTAAAGGAGTTAGTCAGCTGACAGCAGTCACCACGAGGACCACAAACGTGCATGGAGATGAGCTTATTTCCACCACTACGAGTCAATATGAGCAAGCTGCATTCAGGTCCAAAACTGATTGGCGTGTGAGAGCAATATCAGCTACAAATCTACATCTTCGTGTCAACCATATTTATGTGAGTTCAGAAGATACAAAGGAAACAGGCTACACTTACATCATGCCAATGAACATTTTGAAAAAGTTTATCTGTGTAGCTGATCTGAGGACACAAGTTGCTGGTTACTTGTATGGTATAAGCCCACCTGACAACCCTCAGGTTAAGGAAATTTGCTGCATTGTGGTACCACCACAGCGGGGCACCCACCAGCAAGTTCATCTTCCATCAGCTCTTCCTGAGCATGATTTCCTCAATTATTTGGAACCTCTGGGATGGATGCACACCCAGCCAAATGAGCTCCCTCAGCTTTCTCCTCAGGATCTCACCACTCATGCTAACATGTTGGAGAATGGCAAGCAATGGAATAGGGAGAAATGCATTATTATGACATGCACTTTTACTACAGGTTCCTGCTCGTTAACTGCATATAAACTTACTCCTTCTGGTTATGAGTGGGGATGTTGTTCTAATAAGAACAGCGGAAGAAACAATAATCCACTAGATGGATACCTTCCAACTCATTATGAGAAGGTCCAGATGCTTCTCAGTGATCGCTTCCTTGGTTTCTACATGGTTCCTGATAATTGTCCATGGAACTTCAATTTCATGGGAGTGAGGCATGCATGTGACATGAAGTATGGCATCAAGCTTGGACCACCCAAGGAGTACTATCACGAGGAACACCGACCAACCCATTTCATGGAGTTCAGCGAACTAGATAAGGATGACCCAATGGGGTTAGATCGAGATTATGCCTACGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000244 GO:0000375 GO:0000377 GO:0000380 GO:0000386 GO:0000387 GO:0000398 GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005684 GO:0005737 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0010467 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0030619 GO:0030620 GO:0030623 GO:0031593 GO:0032496 GO:0032991 GO:0033993 GO:0034097 GO:0034612 GO:0034622 GO:0034641 GO:0036002 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065003 GO:0070530 GO:0070887 GO:0071005 GO:0071007 GO:0071011 GO:0071013 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071345 GO:0071356 GO:0071396 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097157 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:0140030 GO:0140098 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902494 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
JAB PRO8NT PROCN PROCT PRP8_domainIV RRM_4 U5_2-snRNA_bdg U6-snRNA_bdg

Protein Analysis

702

Amino Acids

80.53

Weight (kDa)

6.73

Isoelectric Point (pI)

42.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PRP8_domainIV PF12134 122 - 351 7.8e-124 PRP8 domain IV core
JAB PF01398 464 - 560 1.4e-10 JAB1/Mov34/MPN/PAD-1 ubiquitin protease
PROCT PF08084 574 - 691 1.9e-42 PROCT (NUC072) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 962
Acc65I GGTACC 1 cut(s) 1525
AccB1I GGYRCC 2 cut(s) 1525, 1541
AccB7I CCANNNNNTGG 2 cut(s) 1844, 2041
AciI CCGC 2 cut(s) 1537, 1821
AclI AACGTT 1 cut(s) 118
AclWI GGATC 2 cut(s) 256, 1668
AcsI RAATTY 2 cut(s) 1104, 1509
AcuI CTGAAG 2 cut(s) 385, 1068
AfaI GTAC 5 cut(s) 65, 804, 1081, 1527, 2009
AfiI CCNNNNNNNGG 7 cut(s) 91, 497, 527, 703, 1538, 1844, 2041
AflIII ACRYGT 3 cut(s) 159, 916, 1680
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 1 cut(s) 520
AleI CACNNNNGTG 3 cut(s) 558, 560, 1229
Alw21I GWGCWC 3 cut(s) 399, 1033, 1641
Alw26I GTCTC 1 cut(s) 921
AlwI GGATC 2 cut(s) 256, 1668
Ama87I CYCGRG 1 cut(s) 126
AoxI GGCC 1 cut(s) 989
ApeKI GCWGC 5 cut(s) 79, 532, 623, 1280, 1515
ApoI RAATTY 2 cut(s) 1104, 1509
Asp718I GGTACC 1 cut(s) 1525
AspLEI GCGC 2 cut(s) 324, 913
AspS9I GGNCC 5 cut(s) 525, 1221, 1290, 1873, 1994
AsuC2I CCSGG 4 cut(s) 127, 128, 246, 529
AsuHPI GGTGA 2 cut(s) 1204, 1657
AvaI CYCGRG 1 cut(s) 126
AvaII GGWCC 5 cut(s) 525, 1221, 1290, 1873, 1994
AxyI CCTNAGG 2 cut(s) 1497, 1656
BaeGI GKGCMC 1 cut(s) 1544
BaeI ACNNNNGTAYC 2 cut(s) 423, 456
BanI GGYRCC 2 cut(s) 1525, 1541
BanII GRGCYC 2 cut(s) 399, 1641
BauI CACGAG 2 cut(s) 1216, 2015
BbsI GAAGAC 1 cut(s) 369
Bbv12I GWGCWC 3 cut(s) 399, 1033, 1641
BbvCI CCTCAGC 1 cut(s) 1644
BbvI GCAGC 5 cut(s) 91, 544, 610, 1267, 1502
BccI CCATC 5 cut(s) 500, 820, 1573, 1608, 1838
BciT130I CCWGG 1 cut(s) 522
BciVI GTATCC 1 cut(s) 1841
BcnI CCSGG 4 cut(s) 127, 128, 246, 529
BcoDI GTCTC 1 cut(s) 921
BfaI CTAG 4 cut(s) 12, 692, 1841, 2057
BfmI CTRYAG 4 cut(s) 360, 609, 752, 1743
BfoI RGCGCY 1 cut(s) 914
BfuI GTATCC 1 cut(s) 1841
BglII AGATCT 1 cut(s) 1039
BisI GCNGC 5 cut(s) 80, 533, 624, 1281, 1516
BlpI GCTNAGC 1 cut(s) 24
BlsI GCNGC 5 cut(s) 81, 534, 625, 1282, 1517
BmcAI AGTACT 3 cut(s) 65, 1081, 2009
Bme1390I CCNGG 5 cut(s) 127, 128, 246, 522, 529
Bme18I GGWCC 5 cut(s) 525, 1221, 1290, 1873, 1994
BmeT110I CYCGRG 1 cut(s) 126
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 5 cut(s) 525, 1221, 1290, 1873, 1994
BmiI GGNNCC 7 cut(s) 357, 526, 1527, 1543, 1605, 1750, 1917
BmrFI CCNGG 5 cut(s) 127, 128, 246, 522, 529
BmsI GCATC 3 cut(s) 1608, 1869, 1992
BoxI GACNNNNGTC 1 cut(s) 1208
BpiI GAAGAC 1 cut(s) 369
Bpu10I CCTNAGC 2 cut(s) 1578, 1644
Bpu1102I GCTNAGC 1 cut(s) 24
BpuMI CCSGG 4 cut(s) 127, 128, 246, 529
BsaJI CCNNGG 6 cut(s) 126, 351, 521, 1900, 1931, 2001
Bsc4I CCNNNNNNNGG 7 cut(s) 91, 497, 527, 703, 1538, 1844, 2041
Bse1I ACTGG 2 cut(s) 71, 242
Bse21I CCTNAGG 2 cut(s) 1497, 1656
Bse3DI GCAATG 3 cut(s) 279, 1016, 1706
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 6 cut(s) 126, 351, 521, 1900, 1931, 2001
BseGI GGATG 6 cut(s) 40, 1020, 1619, 1623, 1805, 2071
BseLI CCNNNNNNNGG 7 cut(s) 91, 497, 527, 703, 1538, 1844, 2041
BseMI GCAATG 3 cut(s) 279, 1016, 1706
BseMII CTCAG 8 cut(s) 15, 807, 1436, 1511, 1569, 1658, 1670, 1900
BseNI ACTGG 2 cut(s) 71, 242
BseRI GAGGAG 1 cut(s) 1644
BseSI GKGCMC 1 cut(s) 1544
BseXI GCAGC 5 cut(s) 91, 544, 610, 1267, 1502
BseYI CCCAGC 1 cut(s) 1626
BsgI GTGCAG 1 cut(s) 98
BshFI GGCC 1 cut(s) 991
BshNI GGYRCC 2 cut(s) 1525, 1541
BsiHKAI GWGCWC 3 cut(s) 399, 1033, 1641
BsiHKCI CYCGRG 1 cut(s) 126
BsiSI CCGG 4 cut(s) 127, 246, 299, 528
BslFI GGGAC 1 cut(s) 538
BslI CCNNNNNNNGG 7 cut(s) 91, 497, 527, 703, 1538, 1844, 2041
BsmAI GTCTC 1 cut(s) 921
BsmFI GGGAC 1 cut(s) 538
BsmI GAATGC 4 cut(s) 220, 693, 881, 1283
BsnI GGCC 1 cut(s) 991
BsoBI CYCGRG 1 cut(s) 126
Bsp1286I GDGCHC 4 cut(s) 399, 1033, 1544, 1641
Bsp143I GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
Bsp1720I GCTNAGC 1 cut(s) 24
Bsp19I CCATGG 1 cut(s) 1931
BspACI CCGC 2 cut(s) 1537, 1821
BspANI GGCC 1 cut(s) 991
BspCNI CTCAG 8 cut(s) 16, 808, 1437, 1510, 1570, 1657, 1669, 1899
BspHI TCATGA 2 cut(s) 106, 285
BspLI GGNNCC 7 cut(s) 357, 526, 1527, 1543, 1605, 1750, 1917
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 2 cut(s) 256, 1668
BspQI GCTCTTC 2 cut(s) 404, 1578
BspT107I GGYRCC 2 cut(s) 1525, 1541
BsrDI GCAATG 3 cut(s) 279, 1016, 1706
BsrI ACTGG 2 cut(s) 71, 242
BssECI CCNNGG 6 cut(s) 126, 351, 521, 1900, 1931, 2001
BssMI GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
BssSI CACGAG 2 cut(s) 1216, 2015
BssT1I CCWWGG 3 cut(s) 1900, 1931, 2001
Bst2BI CACGAG 2 cut(s) 1216, 2015
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 3 cut(s) 964, 1050, 1098
Bst6I CTCTTC 3 cut(s) 404, 854, 1578
BstC8I GCNNGC 4 cut(s) 1029, 1278, 1697, 1962
BstDEI CTNAG 8 cut(s) 24, 816, 1445, 1497, 1578, 1644, 1656, 1886
BstDSI CCRYGG 1 cut(s) 1931
BstF5I GGATG 6 cut(s) 40, 1020, 1619, 1623, 1805, 2071
BstH2I RGCGCY 1 cut(s) 914
BstHHI GCGC 2 cut(s) 324, 913
BstKTI GATC 8 cut(s) 251, 285, 799, 1042, 1444, 1663, 1894, 2086
BstMAI GTCTC 1 cut(s) 921
BstMBI GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
BstMWI GCNNNNNNNGC 6 cut(s) 364, 586, 1322, 1627, 1636, 1645
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 6 cut(s) 163, 920, 1684, 1734, 1964, 1968
BstPAI GACNNNNGTC 1 cut(s) 1208
BstSCI CCNGG 5 cut(s) 125, 126, 244, 520, 527
BstSFI CTRYAG 4 cut(s) 360, 609, 752, 1743
BstSLI GKGCMC 1 cut(s) 1544
BstV1I GCAGC 5 cut(s) 91, 544, 610, 1267, 1502
BstV2I GAAGAC 1 cut(s) 369
BstX2I RGATCY 2 cut(s) 1039, 1660
BstXI CCANNNNNNTGG 1 cut(s) 389
BstYI RGATCY 2 cut(s) 1039, 1660
Bsu36I CCTNAGG 2 cut(s) 1497, 1656
BsuI GTATCC 1 cut(s) 1841
BsuRI GGCC 1 cut(s) 991
BtgI CCRYGG 1 cut(s) 1931
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 6 cut(s) 40, 1020, 1619, 1623, 1805, 2071
BtsI GCAGTG 1 cut(s) 876
BtsIMutI CAGTG 3 cut(s) 257, 876, 1894
Cac8I GCNNGC 4 cut(s) 1029, 1278, 1697, 1962
CciI TCATGA 2 cut(s) 106, 285
CfoI GCGC 2 cut(s) 324, 913
Cfr13I GGNCC 5 cut(s) 525, 1221, 1290, 1873, 1994
Cfr9I CCCGGG 1 cut(s) 126
Csp6I GTAC 5 cut(s) 64, 803, 1080, 1526, 2008
CviQI GTAC 5 cut(s) 64, 803, 1080, 1526, 2008
DdeI CTNAG 8 cut(s) 24, 816, 1445, 1497, 1578, 1644, 1656, 1886
DpnI GATC 8 cut(s) 250, 284, 798, 1041, 1443, 1662, 1893, 2085
DpnII GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
DrdI GACNNNNNNGTC 1 cut(s) 962
DseDI GACNNNNNNGTC 1 cut(s) 962
Eam1104I CTCTTC 3 cut(s) 404, 854, 1578
EarI CTCTTC 3 cut(s) 404, 854, 1578
Ecl136II GAGCTC 2 cut(s) 397, 1639
Eco130I CCWWGG 3 cut(s) 1900, 1931, 2001
Eco24I GRGCYC 2 cut(s) 399, 1641
Eco47I GGWCC 5 cut(s) 525, 1221, 1290, 1873, 1994
Eco53kI GAGCTC 2 cut(s) 397, 1639
Eco57I CTGAAG 2 cut(s) 385, 1068
Eco81I CCTNAGG 2 cut(s) 1497, 1656
Eco88I CYCGRG 1 cut(s) 126
EcoICRI GAGCTC 2 cut(s) 397, 1639
EcoRII CCWGG 1 cut(s) 520
EcoT14I CCWWGG 3 cut(s) 1900, 1931, 2001
EcoT22I ATGCAT 2 cut(s) 1721, 1966
EcoT38I GRGCYC 2 cut(s) 399, 1641
ErhI CCWWGG 3 cut(s) 1900, 1931, 2001
FalI AAGNNNNNCTT 2 cut(s) 1545, 1577
FaqI GGGAC 1 cut(s) 538
FauI CCCGC 1 cut(s) 1530
Fnu4HI GCNGC 5 cut(s) 80, 533, 624, 1281, 1516
FokI GGATG 6 cut(s) 47, 1027, 1626, 1630, 1812, 2078
FriOI GRGCYC 2 cut(s) 399, 1641
Fsp4HI GCNGC 5 cut(s) 80, 533, 624, 1281, 1516
FspBI CTAG 4 cut(s) 12, 692, 1841, 2057
GlaI GCGC 2 cut(s) 323, 912
GluI GCNGC 5 cut(s) 80, 533, 624, 1281, 1516
GsaI CCCAGC 1 cut(s) 1630
HaeII RGCGCY 1 cut(s) 914
HaeIII GGCC 1 cut(s) 991
HapII CCGG 4 cut(s) 127, 246, 299, 528
HhaI GCGC 2 cut(s) 324, 913
Hin6I GCGC 2 cut(s) 322, 911
HinP1I GCGC 2 cut(s) 322, 911
HincII GTYRAC 3 cut(s) 427, 1348, 1761
HindII GTYRAC 3 cut(s) 427, 1348, 1761
HindIII AAGCTT 1 cut(s) 1988
HinfI GANTC 5 cut(s) 101, 262, 676, 901, 1264
HpaI GTTAAC 1 cut(s) 1761
HpaII CCGG 4 cut(s) 127, 246, 299, 528
HphI GGTGA 2 cut(s) 1204, 1657
Hpy166II GTNNAC 5 cut(s) 427, 844, 922, 1348, 1761
Hpy188I TCNGA 7 cut(s) 180, 355, 900, 1003, 1054, 1369, 1446
Hpy8I GTNNAC 5 cut(s) 427, 844, 922, 1348, 1761
Hpy99I CGWCG 1 cut(s) 184
HpyAV CCTTC 9 cut(s) 25, 183, 538, 1002, 1012, 1152, 1791, 1862, 1864
HpyCH4III ACNGT 3 cut(s) 964, 1050, 1098
HpyCH4IV ACGT 3 cut(s) 75, 118, 1230
HpyF10VI GCNNNNNNNGC 6 cut(s) 364, 586, 1322, 1627, 1636, 1645
HpyF3I CTNAG 8 cut(s) 24, 816, 1445, 1497, 1578, 1644, 1656, 1886
HpySE526I ACGT 3 cut(s) 75, 118, 1230
HspAI GCGC 2 cut(s) 322, 911
KpnI GGTACC 1 cut(s) 1529
KspAI GTTAAC 1 cut(s) 1761
Kzo9I GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
LguI GCTCTTC 2 cut(s) 404, 1578
LmnI GCTCC 6 cut(s) 87, 319, 355, 394, 1124, 1644
Lsp1109I GCAGC 5 cut(s) 91, 544, 610, 1267, 1502
LweI GCATC 3 cut(s) 1608, 1869, 1992
MaeI CTAG 4 cut(s) 12, 692, 1841, 2057
MaeII ACGT 3 cut(s) 75, 118, 1230
MaeIII GTNAC 8 cut(s) 119, 233, 448, 481, 673, 1210, 1463, 1967
MalI GATC 8 cut(s) 250, 284, 798, 1041, 1443, 1662, 1893, 2085
MboI GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
MflI RGATCY 2 cut(s) 1039, 1660
MhlI GDGCHC 4 cut(s) 399, 1033, 1544, 1641
MluCI AATT 8 cut(s) 411, 666, 780, 1104, 1509, 1594, 1924, 1942
MlyI GAGTC 2 cut(s) 670, 1273
MmeI TCCRAC 3 cut(s) 203, 1665, 1880
Mph1103I ATGCAT 2 cut(s) 1721, 1966
MseI TTAA 4 cut(s) 414, 837, 1503, 1760
MspA1I CMGCKG 4 cut(s) 535, 1201, 1537, 1821
MspI CCGG 4 cut(s) 127, 246, 299, 528
MspR9I CCNGG 5 cut(s) 127, 128, 246, 522, 529
Mva1269I GAATGC 4 cut(s) 220, 693, 881, 1283
MvaI CCWGG 1 cut(s) 522
MwoI GCNNNNNNNGC 6 cut(s) 364, 586, 1322, 1627, 1636, 1645
NciI CCSGG 4 cut(s) 127, 128, 246, 529
NcoI CCATGG 1 cut(s) 1931
NdeII GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
NlaIV GGNNCC 7 cut(s) 357, 526, 1527, 1543, 1605, 1750, 1917
NmeAIII GCCGAG 1 cut(s) 868
NmuCI GTSAC 3 cut(s) 673, 1210, 1967
NsiI ATGCAT 2 cut(s) 1721, 1966
NspI RCATGY 6 cut(s) 163, 920, 1684, 1734, 1964, 1968
OliI CACNNNNGTG 3 cut(s) 558, 560, 1229
PaeI GCATGC 1 cut(s) 1964
PagI TCATGA 2 cut(s) 106, 285
PciI ACATGT 3 cut(s) 159, 916, 1680
PciSI GCTCTTC 2 cut(s) 404, 1578
PctI GAATGC 4 cut(s) 220, 693, 881, 1283
PfeI GAWTC 3 cut(s) 101, 262, 901
PflMI CCANNNNNTGG 2 cut(s) 1844, 2041
PfoI TCCNGGA 1 cut(s) 244
PkrI GCNGC 5 cut(s) 81, 534, 625, 1282, 1517
PleI GAGTC 2 cut(s) 670, 1272
PpsI GAGTC 2 cut(s) 670, 1272
PscI ACATGT 3 cut(s) 159, 916, 1680
PshAI GACNNNNGTC 1 cut(s) 1208
Psp124BI GAGCTC 2 cut(s) 399, 1641
Psp1406I AACGTT 1 cut(s) 118
Psp6I CCWGG 1 cut(s) 520
PspFI CCCAGC 1 cut(s) 1626
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 7 cut(s) 357, 526, 1527, 1543, 1605, 1750, 1917
PspPI GGNCC 5 cut(s) 525, 1221, 1290, 1873, 1994
PstI CTGCAG 1 cut(s) 613
PsuI RGATCY 2 cut(s) 1039, 1660
PvuII CAGCTG 2 cut(s) 535, 1201
RsaI GTAC 5 cut(s) 65, 804, 1081, 1527, 2009
RsaNI GTAC 5 cut(s) 64, 803, 1080, 1526, 2008
SacI GAGCTC 2 cut(s) 399, 1641
SapI GCTCTTC 2 cut(s) 404, 1578
SaqAI TTAA 4 cut(s) 414, 837, 1503, 1760
SatI GCNGC 5 cut(s) 80, 533, 624, 1281, 1516
Sau3AI GATC 8 cut(s) 248, 282, 796, 1039, 1441, 1660, 1891, 2083
Sau96I GGNCC 5 cut(s) 525, 1221, 1290, 1873, 1994
ScaI AGTACT 3 cut(s) 65, 1081, 2009
SchI GAGTC 2 cut(s) 670, 1273
ScrFI CCNGG 5 cut(s) 127, 128, 246, 522, 529
SduI GDGCHC 4 cut(s) 399, 1033, 1544, 1641
SfaNI GCATC 3 cut(s) 1608, 1869, 1992
SfcI CTRYAG 4 cut(s) 360, 609, 752, 1743
SinI GGWCC 5 cut(s) 525, 1221, 1290, 1873, 1994
SmaI CCCGGG 1 cut(s) 128
SphI GCATGC 1 cut(s) 1964
Sse9I AATT 8 cut(s) 411, 666, 780, 1104, 1509, 1594, 1924, 1942
SsiI CCGC 2 cut(s) 1537, 1821
SspMI CTAG 4 cut(s) 12, 692, 1841, 2057
SstI GAGCTC 2 cut(s) 399, 1641
StyD4I CCNGG 5 cut(s) 125, 126, 244, 520, 527
StyI CCWWGG 3 cut(s) 1900, 1931, 2001
TaaI ACNGT 3 cut(s) 964, 1050, 1098
TaiI ACGT 3 cut(s) 78, 121, 1233
TaqI TCGA 2 cut(s) 5, 2086
TaqII GACCGA 1 cut(s) 972
TasI AATT 8 cut(s) 411, 666, 780, 1104, 1509, 1594, 1924, 1942
TatI WGTACW 3 cut(s) 63, 1079, 2007
TfiI GAWTC 3 cut(s) 101, 262, 901
Tru1I TTAA 4 cut(s) 414, 837, 1503, 1760
Tru9I TTAA 4 cut(s) 414, 837, 1503, 1760
TscAI CASTG 3 cut(s) 264, 883, 1894
TseFI GTSAC 3 cut(s) 673, 1210, 1967
TseI GCWGC 5 cut(s) 79, 532, 623, 1280, 1515
Tsp45I GTSAC 3 cut(s) 673, 1210, 1967
TspGWI ACGGA 2 cut(s) 74, 486
TspMI CCCGGG 1 cut(s) 126
TspRI CASTG 3 cut(s) 264, 883, 1894
Van91I CCANNNNNTGG 2 cut(s) 1844, 2041
VpaK11BI GGWCC 5 cut(s) 525, 1221, 1290, 1873, 1994
XapI RAATTY 2 cut(s) 1104, 1509
XceI RCATGY 6 cut(s) 163, 920, 1684, 1734, 1964, 1968
XcmI CCANNNNNNNNNTGG 1 cut(s) 984
XmaI CCCGGG 1 cut(s) 126
XspI CTAG 4 cut(s) 12, 692, 1841, 2057
ZrmI AGTACT 3 cut(s) 65, 1081, 2009
Zsp2I ATGCAT 2 cut(s) 1721, 1966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.