Rorug02G0484600

pre-mRNA-processing-splicing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000798
Physical Location & Seq
Reverse (-)
61424011 .. 61426951
2941 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0484600.1

Sequence Viewer

Length: 2190 bp
ATGGTACCTGTTCTGTTTTTACTTCATGTGATTACTCTGTTCTTGTGGTCTATGAGTACTATTGCGGCGCAGCCGGTAGCATCAGAAGCCGTACCTATAGCAAAGCCTAATTGTACATCATATTGCGGAGACGTTCAAATCCCATATCCTTTTGGAATTGAAGCAGGTTGTTACATAGACGACTGGTTCAAAATTTTCTGTTACAAACCCACCGGCAAGTTAGCCGGCCAACCCACAGCTTACTTGAACCCCGCCAATCTGAACCTTGTGGTCATCAATATTTCTCTTGAAGCAGGAACAATGCAGGTAACAAATAACTTCACATTTTCTAGTCTTGGCTGCGTTGATCAGGCAACTGCCGTCCTACCAGCCAACTTGAGCGGAAGCCCGTTCCTCTACTCCGAGAAAAACAAATTCACTGTAATTGGATGCGGTGGAATCACCTGGATGATGCTCTCCAACGGTTCAAAAGTTGGTGGCTGCCTGGCCACTTGTGACGGCAGTGATCCTGCACAACGTGAATTTCTTGATGGCTGCACAGGTATCAACTCATGCTGTCAGACCAACATTCCTCCGAATCTTACTGCTTTCAACTACAGCTATCAAGCAATAGATACAACTTACCCTGGAAATGACTCTTGCAAGAAGGCATTTTTGGTAAACCCGGATTGGGTTGGGTACTCAAGCGGAGGAATGGTATCCATAAAGCAACTTGCCATCCCTATGTTGCTCGACTGGAGATTAAGTAATTACTCAACTCTTCAAATACGTGGAACAGCTGATTGGGCCAATAACTCGGGCACGACATGCACAAATGCTAGTTTGTGTTCCTGCTCATCCGGGTTTCAGGGAAACCCCTACCTTCCCAACGGATGTCAAGATATCAATGAATGTGAAGATTCAGACCCATGTCCTGGTGCCAGCATTTGTATCAACGTTCGTGGTTCGTTTAGGTGCCAATCTCCGGATCAAACGGTTAAACTGGCAATTATTGTTGTCGGCAGTGTTCTTGGAGCATTGCTTATACTCATTTGTGCATGGGGGTTACACAATGTCATAAAGAAAAGAAAAAACACTAAACTCAAGGAGAAGTTTTTTAAGCAGAATGGTGGTTTGCTGCTGGAGAAACAATCTTCTGGTGACGTTAATGTTGAGAAAATTAAATTGTTCAATTCCGAGGAGTTGGAGAAAGCCACAGATAATTATAATGCAAACAGAATTCTAGGTCAAGGAGGCCATGGAACTGTTTACAAAGGCATGCTCGCAGATGGAAGTATTGTGGCGATAAAGAAATCTAAAATAGTTGATGAAGGAGAAGTTGAACAATTCATTAATGAAATTGTTATTCTTTCACAAATAATTCATAGGAATGTGGTTAAATTAATGGGTTGTTGTTTAGAGACCGAAGTTCCCCTTCTAGTTTATGAATTCATACCAAATGGAACTCTTTCTCAGTATATTCATCACCAGAATGAGGAGTTTCCTCTTACATGGAGAGTGCGGTTGCGAGTTTCTATTGAAGTGGCAGGAGCTCTTTCCTACTTACACTCAGCAACTTCCTTTCCCATTTACCATCGAGATATCAAGACCTCCAACATACTCTTGGATGATAAATTTAGAGCTAAAGTTGCAGACTTTGGAACTTCCAGAACAGTTGCCATCGACAAAACACATCTTACCATGTCACAAGTTCAAGGAACATTTGGTTATTTAGACCCAGAGTACTTCCAGTCTAGCCAATTTACAGATAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGTTGAACTTCTAACTGGGCAAAAGCCAGTTTCTCAGACGAGGCCAGAAGAGTGGAGAAGCCTGACAAATTATTTCCTTCTTTCAATGGAGGAGAATTGTCTGCTTGACATTCTTGATGCTCGAGTTATGAATGAAGGTGGCAAGGAAGAAATTATGGCAGTTGCACAGCTTGCAAGGCGTTGCTTGAATATGAAGGGAAAGAAACGTCCTACTATGAAAGAAGTTGCAGTTCAATTGGAGGGAATATTTCAATTATCAGCAAAAGATTCTGACGTTCATACAAATTCAGCAGAGGTTGAATATGTCCTAAATGGATGGCATGTTGGTTCTACTTCAGCACGATATAACACAATCCATATTGGTAGTGGTTCTCCATCGGATGTAGAACCACTTATATATGTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000244 GO:0000375 GO:0000377 GO:0000380 GO:0000386 GO:0000387 GO:0000398 GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005684 GO:0005737 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0010467 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0030619 GO:0030620 GO:0030623 GO:0031593 GO:0032496 GO:0032991 GO:0033993 GO:0034097 GO:0034612 GO:0034622 GO:0034641 GO:0036002 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065003 GO:0070530 GO:0070887 GO:0071005 GO:0071007 GO:0071011 GO:0071013 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071345 GO:0071356 GO:0071396 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097157 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:0140030 GO:0140098 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902494 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
JAB PRO8NT PROCN PROCT PRP8_domainIV RRM_4 U5_2-snRNA_bdg U6-snRNA_bdg

Protein Analysis

729

Amino Acids

79.98

Weight (kDa)

5.74

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 38 - 104 3.3e-09 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 294 - 320 1e-05 Calcium-binding EGF domain
Pkinase PF00069 402 - 669 8.3e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 405 - 672 2.5e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1206
Acc36I ACCTGC 2 cut(s) 155, 295
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 3 cut(s) 4, 917, 954
AccB7I CCANNNNNTGG 1 cut(s) 914
AccBSI CCGCTC 1 cut(s) 381
AccIII TCCGGA 1 cut(s) 964
AciI CCGC 7 cut(s) 65, 126, 252, 381, 432, 687, 1501
AclI AACGTT 1 cut(s) 936
AclWI GGATC 2 cut(s) 500, 975
AcoI YGGCCR 2 cut(s) 226, 486
AcsI RAATTY 7 cut(s) 192, 413, 521, 1218, 1427, 1613, 2065
AcuI CTGAAG 1 cut(s) 2100
AdeI CACNNNGTG 1 cut(s) 518
AfaI GTAC 6 cut(s) 6, 58, 93, 115, 680, 1724
AfiI CCNNNNNNNGG 4 cut(s) 670, 914, 964, 1474
AjnI CCWGG 4 cut(s) 443, 483, 625, 913
AjuI GAANNNNNNNTTGG 4 cut(s) 638, 670, 766, 798
AluBI AGCT 7 cut(s) 239, 600, 779, 1532, 1622, 1767, 1951
AluI AGCT 7 cut(s) 239, 600, 779, 1532, 1622, 1767, 1951
Alw21I GWGCWC 1 cut(s) 1534
Alw26I GTCTC 2 cut(s) 123, 1394
AlwI GGATC 2 cut(s) 500, 975
Ama87I CYCGRG 2 cut(s) 796, 1902
Aor13HI TCCGGA 1 cut(s) 964
AoxI GGCC 5 cut(s) 226, 486, 786, 1234, 1823
ApeKI GCWGC 5 cut(s) 70, 339, 480, 534, 1117
ApoI RAATTY 7 cut(s) 192, 413, 521, 1218, 1427, 1613, 2065
AseI ATTAAT 2 cut(s) 1332, 1382
Asp700I GAANNNNTTC 1 cut(s) 1447
Asp718I GGTACC 1 cut(s) 4
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 2 cut(s) 786, 1777
AsuC2I CCSGG 2 cut(s) 665, 841
AsuHPI GGTGA 3 cut(s) 433, 1151, 1457
AvaI CYCGRG 2 cut(s) 796, 1902
AvaII GGWCC 1 cut(s) 1777
BaeGI GKGCMC 1 cut(s) 803
BalI TGGCCA 1 cut(s) 488
BanI GGYRCC 3 cut(s) 4, 917, 954
BanII GRGCYC 1 cut(s) 1534
Bbv12I GWGCWC 1 cut(s) 1534
BbvI GCAGC 5 cut(s) 82, 326, 467, 521, 1104
BccI CCATC 7 cut(s) 524, 725, 1262, 1581, 1667, 2091, 2164
BceAI ACGGC 3 cut(s) 74, 344, 514
BciT130I CCWGG 4 cut(s) 445, 485, 627, 915
BciVI GTATCC 1 cut(s) 709
BclI TGATCA 1 cut(s) 346
BcnI CCSGG 2 cut(s) 665, 841
BcoDI GTCTC 2 cut(s) 123, 1394
BfaI CTAG 5 cut(s) 330, 819, 1223, 1418, 1734
BfmI CTRYAG 2 cut(s) 96, 595
BfuAI ACCTGC 2 cut(s) 155, 295
BfuI GTATCC 1 cut(s) 709
BisI GCNGC 6 cut(s) 66, 71, 340, 481, 535, 1118
BlsI GCNGC 6 cut(s) 67, 72, 341, 482, 536, 1119
BmcAI AGTACT 2 cut(s) 58, 1724
Bme1390I CCNGG 6 cut(s) 445, 485, 627, 665, 841, 915
Bme18I GGWCC 1 cut(s) 1777
BmeT110I CYCGRG 2 cut(s) 796, 1902
BmgT120I GGNCC 2 cut(s) 786, 1777
BmiI GGNNCC 3 cut(s) 6, 919, 956
BmrFI CCNGG 6 cut(s) 445, 485, 627, 665, 841, 915
BmrI ACTGGG 1 cut(s) 1806
BmsI GCATC 4 cut(s) 89, 419, 441, 1888
BmuI ACTGGG 1 cut(s) 1806
BoxI GACNNNNGTC 1 cut(s) 909
BpmI CTGGAG 2 cut(s) 757, 1142
BpuEI CTTGAG 3 cut(s) 397, 667, 1067
BpuMI CCSGG 2 cut(s) 665, 841
BsaAI YACGTR 1 cut(s) 770
BsaI GGTCTC 1 cut(s) 1394
BsaJI CCNNGG 3 cut(s) 625, 1176, 1237
BsaWI WCCGGW 1 cut(s) 964
BsaXI ACNNNNNCTCC 4 cut(s) 681, 711, 730, 760
Bsc4I CCNNNNNNNGG 4 cut(s) 670, 914, 964, 1474
Bse118I RCCGGY 3 cut(s) 73, 212, 224
Bse1I ACTGG 6 cut(s) 188, 740, 987, 1729, 1801, 1808
Bse3DI GCAATG 1 cut(s) 1016
BseAI TCCGGA 1 cut(s) 964
BseBI CCWGG 4 cut(s) 445, 485, 627, 915
BseDI CCNNGG 3 cut(s) 625, 1176, 1237
BseGI GGATG 8 cut(s) 434, 453, 717, 836, 878, 1612, 2102, 2167
BseLI CCNNNNNNNGG 4 cut(s) 670, 914, 964, 1474
BseMI GCAATG 1 cut(s) 1016
BseMII CTCAG 3 cut(s) 1466, 1563, 1829
BseNI ACTGG 6 cut(s) 188, 740, 987, 1729, 1801, 1808
BseRI GAGGAG 3 cut(s) 1193, 1490, 1886
BseSI GKGCMC 1 cut(s) 803
BseXI GCAGC 5 cut(s) 82, 326, 467, 521, 1104
BsgI GTGCAG 2 cut(s) 495, 520
BshFI GGCC 5 cut(s) 228, 488, 788, 1236, 1825
BshNI GGYRCC 3 cut(s) 4, 917, 954
BsiHKAI GWGCWC 1 cut(s) 1534
BsiHKCI CYCGRG 2 cut(s) 796, 1902
BsiSI CCGG 6 cut(s) 74, 213, 225, 665, 840, 965
BslI CCNNNNNNNGG 4 cut(s) 670, 914, 964, 1474
BsmAI GTCTC 2 cut(s) 123, 1394
BsmBI CGTCTC 1 cut(s) 123
BsnI GGCC 5 cut(s) 228, 488, 788, 1236, 1825
Bso31I GGTCTC 1 cut(s) 1394
BsoBI CYCGRG 2 cut(s) 796, 1902
Bsp1286I GDGCHC 2 cut(s) 803, 1534
Bsp13I TCCGGA 1 cut(s) 964
Bsp1407I TGTACA 1 cut(s) 113
Bsp143I GATC 3 cut(s) 346, 505, 967
Bsp19I CCATGG 1 cut(s) 1237
BspACI CCGC 7 cut(s) 65, 126, 252, 381, 432, 687, 1501
BspANI GGCC 5 cut(s) 228, 488, 788, 1236, 1825
BspCNI CTCAG 3 cut(s) 1465, 1562, 1828
BspEI TCCGGA 1 cut(s) 964
BspLI GGNNCC 3 cut(s) 6, 919, 956
BspMI ACCTGC 2 cut(s) 155, 295
BspPI GGATC 2 cut(s) 500, 975
BspT107I GGYRCC 3 cut(s) 4, 917, 954
BspTNI GGTCTC 1 cut(s) 1394
BsrBI CCGCTC 1 cut(s) 381
BsrDI GCAATG 1 cut(s) 1016
BsrFI RCCGGY 3 cut(s) 73, 212, 224
BsrGI TGTACA 1 cut(s) 113
BsrI ACTGG 6 cut(s) 188, 740, 987, 1729, 1801, 1808
BssAI RCCGGY 3 cut(s) 73, 212, 224
BssECI CCNNGG 3 cut(s) 625, 1176, 1237
BssMI GATC 3 cut(s) 346, 505, 967
BssT1I CCWWGG 1 cut(s) 1237
Bst2UI CCWGG 4 cut(s) 445, 485, 627, 915
Bst4CI ACNGT 5 cut(s) 421, 464, 976, 1246, 1654
Bst6I CTCTTC 2 cut(s) 765, 1824
BstAPI GCANNNNNTGC 2 cut(s) 807, 1952
BstAUI TGTACA 1 cut(s) 113
BstBAI YACGTR 1 cut(s) 770
BstC8I GCNNGC 5 cut(s) 226, 922, 1259, 1263, 1953
BstDEI CTNAG 3 cut(s) 1452, 1549, 1815
BstDSI CCRYGG 1 cut(s) 1237
BstF5I GGATG 8 cut(s) 434, 453, 717, 836, 878, 1612, 2102, 2167
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 3 cut(s) 349, 508, 970
BstMAI GTCTC 2 cut(s) 123, 1394
BstMBI GATC 3 cut(s) 346, 505, 967
BstMWI GCNNNNNNNGC 6 cut(s) 86, 785, 807, 1628, 1952, 1957
BstNI CCWGG 4 cut(s) 445, 485, 627, 915
BstNSI RCATGY 3 cut(s) 810, 1261, 2105
BstPAI GACNNNNGTC 1 cut(s) 909
BstSCI CCNGG 6 cut(s) 443, 483, 625, 663, 839, 913
BstSFI CTRYAG 2 cut(s) 96, 595
BstSLI GKGCMC 1 cut(s) 803
BstV1I GCAGC 5 cut(s) 82, 326, 467, 521, 1104
BstXI CCANNNNNNTGG 1 cut(s) 1833
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 5 cut(s) 228, 488, 788, 1236, 1825
BtgI CCRYGG 1 cut(s) 1237
BtsCI GGATG 8 cut(s) 434, 453, 717, 836, 878, 1612, 2102, 2167
BtsI GCAGTG 2 cut(s) 508, 1009
BtsIMutI CAGTG 3 cut(s) 417, 508, 1009
BveI ACCTGC 2 cut(s) 155, 295
Cac8I GCNNGC 5 cut(s) 226, 922, 1259, 1263, 1953
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 3 cut(s) 73, 212, 224
Cfr13I GGNCC 2 cut(s) 786, 1777
Csp6I GTAC 6 cut(s) 5, 57, 92, 114, 679, 1723
CspCI CAANNNNNGTGG 2 cut(s) 922, 957
CviQI GTAC 6 cut(s) 5, 57, 92, 114, 679, 1723
DdeI CTNAG 3 cut(s) 1452, 1549, 1815
DpnI GATC 3 cut(s) 348, 507, 969
DpnII GATC 3 cut(s) 346, 505, 967
DraIII CACNNNGTG 1 cut(s) 518
EaeI YGGCCR 2 cut(s) 226, 486
Eam1104I CTCTTC 2 cut(s) 765, 1824
EarI CTCTTC 2 cut(s) 765, 1824
Ecl136II GAGCTC 1 cut(s) 1532
Eco130I CCWWGG 1 cut(s) 1237
Eco24I GRGCYC 1 cut(s) 1534
Eco31I GGTCTC 1 cut(s) 1394
Eco32I GATATC 2 cut(s) 883, 1582
Eco47I GGWCC 1 cut(s) 1777
Eco53kI GAGCTC 1 cut(s) 1532
Eco57I CTGAAG 1 cut(s) 2100
Eco88I CYCGRG 2 cut(s) 796, 1902
EcoICRI GAGCTC 1 cut(s) 1532
EcoRI GAATTC 2 cut(s) 1218, 1427
EcoRII CCWGG 4 cut(s) 443, 483, 625, 913
EcoRV GATATC 2 cut(s) 883, 1582
EcoT14I CCWWGG 1 cut(s) 1237
EcoT38I GRGCYC 1 cut(s) 1534
ErhI CCWWGG 1 cut(s) 1237
Esp3I CGTCTC 1 cut(s) 123
FalI AAGNNNNNCTT 2 cut(s) 1398, 1430
FauI CCCGC 1 cut(s) 259
FbaI TGATCA 1 cut(s) 346
Fnu4HI GCNGC 6 cut(s) 66, 71, 340, 481, 535, 1118
FokI GGATG 8 cut(s) 441, 460, 704, 823, 885, 1619, 2109, 2174
FriOI GRGCYC 1 cut(s) 1534
Fsp4HI GCNGC 6 cut(s) 66, 71, 340, 481, 535, 1118
FspBI CTAG 5 cut(s) 330, 819, 1223, 1418, 1734
GlaI GCGC 1 cut(s) 69
GluI GCNGC 6 cut(s) 66, 71, 340, 481, 535, 1118
GsuI CTGGAG 2 cut(s) 757, 1142
HaeIII GGCC 5 cut(s) 228, 488, 788, 1236, 1825
HapII CCGG 6 cut(s) 74, 213, 225, 665, 840, 965
HhaI GCGC 1 cut(s) 70
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HinfI GANTC 5 cut(s) 438, 577, 635, 899, 2048
HpaII CCGG 6 cut(s) 74, 213, 225, 665, 840, 965
HphI GGTGA 3 cut(s) 433, 1151, 1457
Hpy166II GTNNAC 2 cut(s) 661, 1249
Hpy188III TCNNGA 9 cut(s) 287, 527, 878, 965, 1577, 1585, 1647, 1895, 2187
Hpy8I GTNNAC 2 cut(s) 661, 1249
HpyAV CCTTC 7 cut(s) 640, 872, 1304, 1424, 1868, 1910, 1969
HpyCH4III ACNGT 5 cut(s) 421, 464, 976, 1246, 1654
HpyCH4IV ACGT 7 cut(s) 132, 517, 769, 936, 1143, 1987, 2055
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 785, 807, 1628, 1952, 1957
HpyF3I CTNAG 3 cut(s) 1452, 1549, 1815
HpySE526I ACGT 7 cut(s) 132, 517, 769, 936, 1143, 1987, 2055
HspAI GCGC 1 cut(s) 68
Kpn2I TCCGGA 1 cut(s) 964
KpnI GGTACC 1 cut(s) 8
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 346
Kzo9I GATC 3 cut(s) 346, 505, 967
LmnI GCTCC 2 cut(s) 1013, 1529
Lsp1109I GCAGC 5 cut(s) 82, 326, 467, 521, 1104
LweI GCATC 4 cut(s) 89, 419, 441, 1888
MaeI CTAG 5 cut(s) 330, 819, 1223, 1418, 1734
MaeII ACGT 7 cut(s) 132, 517, 769, 936, 1143, 1987, 2055
MaeIII GTNAC 7 cut(s) 170, 200, 307, 494, 1044, 1139, 1683
MalI GATC 3 cut(s) 348, 507, 969
MbiI CCGCTC 1 cut(s) 381
MboI GATC 3 cut(s) 346, 505, 967
MboII GAAGA 5 cut(s) 752, 908, 1125, 1841, 1940
MfeI CAATTG 1 cut(s) 2015
MhlI GDGCHC 2 cut(s) 803, 1534
MlsI TGGCCA 1 cut(s) 488
MluNI TGGCCA 1 cut(s) 488
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 3 cut(s) 483, 1164, 1617
Mox20I TGGCCA 1 cut(s) 488
MroI TCCGGA 1 cut(s) 964
MroNI GCCGGC 1 cut(s) 224
MroXI GAANNNNTTC 1 cut(s) 1447
MscI TGGCCA 1 cut(s) 488
MseI TTAA 8 cut(s) 743, 978, 1098, 1146, 1161, 1332, 1377, 1382
MslI CAYNNNNRTG 4 cut(s) 446, 722, 1368, 1470
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 1 cut(s) 779
MspI CCGG 6 cut(s) 74, 213, 225, 665, 840, 965
MspR9I CCNGG 6 cut(s) 445, 485, 627, 665, 841, 915
MunI CAATTG 1 cut(s) 2015
MvaI CCWGG 4 cut(s) 445, 485, 627, 915
MwoI GCNNNNNNNGC 6 cut(s) 86, 785, 807, 1628, 1952, 1957
NaeI GCCGGC 1 cut(s) 226
NciI CCSGG 2 cut(s) 665, 841
NcoI CCATGG 1 cut(s) 1237
NdeII GATC 3 cut(s) 346, 505, 967
NgoMIV GCCGGC 1 cut(s) 224
NlaIV GGNNCC 3 cut(s) 6, 919, 956
NmuCI GTSAC 3 cut(s) 494, 1139, 1683
NspI RCATGY 3 cut(s) 810, 1261, 2105
PaeI GCATGC 1 cut(s) 1261
PaeR7I CTCGAG 1 cut(s) 1902
PdiI GCCGGC 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 1447
PfeI GAWTC 4 cut(s) 438, 577, 899, 2048
PflMI CCANNNNNTGG 1 cut(s) 914
PkrI GCNGC 6 cut(s) 67, 72, 341, 482, 536, 1119
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
Ppu21I YACGTR 1 cut(s) 770
PshAI GACNNNNGTC 1 cut(s) 909
PshBI ATTAAT 2 cut(s) 1332, 1382
PsiI TTATAA 1 cut(s) 1206
Psp124BI GAGCTC 1 cut(s) 1534
Psp1406I AACGTT 1 cut(s) 936
Psp6I CCWGG 4 cut(s) 443, 483, 625, 913
PspGI CCWGG 4 cut(s) 443, 483, 625, 913
PspN4I GGNNCC 3 cut(s) 6, 919, 956
PspPI GGNCC 2 cut(s) 786, 1777
PspXI VCTCGAGB 1 cut(s) 1902
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 6 cut(s) 6, 58, 93, 115, 680, 1724
RsaNI GTAC 6 cut(s) 5, 57, 92, 114, 679, 1723
RseI CAYNNNNRTG 4 cut(s) 446, 722, 1368, 1470
SacI GAGCTC 1 cut(s) 1534
SaqAI TTAA 8 cut(s) 743, 978, 1098, 1146, 1161, 1332, 1377, 1382
SatI GCNGC 6 cut(s) 66, 71, 340, 481, 535, 1118
Sau3AI GATC 3 cut(s) 346, 505, 967
Sau96I GGNCC 2 cut(s) 786, 1777
ScaI AGTACT 2 cut(s) 58, 1724
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 6 cut(s) 445, 485, 627, 665, 841, 915
SduI GDGCHC 2 cut(s) 803, 1534
SfaNI GCATC 4 cut(s) 89, 419, 441, 1888
SfcI CTRYAG 2 cut(s) 96, 595
Sfr274I CTCGAG 1 cut(s) 1902
SinI GGWCC 1 cut(s) 1777
SlaI CTCGAG 1 cut(s) 1902
SmiMI CAYNNNNRTG 4 cut(s) 446, 722, 1368, 1470
SmlI CTYRAG 4 cut(s) 376, 682, 1082, 1902
SmoI CTYRAG 4 cut(s) 376, 682, 1082, 1902
SphI GCATGC 1 cut(s) 1261
SsiI CCGC 7 cut(s) 65, 126, 252, 381, 432, 687, 1501
SspI AATATT 2 cut(s) 280, 2028
SspMI CTAG 5 cut(s) 330, 819, 1223, 1418, 1734
SstI GAGCTC 1 cut(s) 1534
StyD4I CCNGG 6 cut(s) 443, 483, 625, 663, 839, 913
StyI CCWWGG 1 cut(s) 1237
TaaI ACNGT 5 cut(s) 421, 464, 976, 1246, 1654
TaiI ACGT 7 cut(s) 135, 520, 772, 939, 1146, 1990, 2058
TaqI TCGA 4 cut(s) 732, 1576, 1662, 1903
TaqII GACCGA 1 cut(s) 1418
TatI WGTACW 3 cut(s) 56, 113, 1722
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 4 cut(s) 438, 577, 899, 2048
Tru1I TTAA 8 cut(s) 743, 978, 1098, 1146, 1161, 1332, 1377, 1382
Tru9I TTAA 8 cut(s) 743, 978, 1098, 1146, 1161, 1332, 1377, 1382
TscAI CASTG 3 cut(s) 424, 508, 1009
TseFI GTSAC 3 cut(s) 494, 1139, 1683
TseI GCWGC 5 cut(s) 70, 339, 480, 534, 1117
Tsp45I GTSAC 3 cut(s) 494, 1139, 1683
TspGWI ACGGA 1 cut(s) 885
TspRI CASTG 3 cut(s) 424, 508, 1009
Van91I CCANNNNNTGG 1 cut(s) 914
VpaK11BI GGWCC 1 cut(s) 1777
VspI ATTAAT 2 cut(s) 1332, 1382
XapI RAATTY 7 cut(s) 192, 413, 521, 1218, 1427, 1613, 2065
XceI RCATGY 3 cut(s) 810, 1261, 2105
XcmI CCANNNNNNNNNTGG 2 cut(s) 1600, 2144
XhoI CTCGAG 1 cut(s) 1902
XmnI GAANNNNTTC 1 cut(s) 1447
XspI CTAG 5 cut(s) 330, 819, 1223, 1418, 1734
ZrmI AGTACT 2 cut(s) 58, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.