Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000798

Physical Location & Seq

Genomic Coordinates Forward (+)

73129133 .. 73132669

Gene Structure 3537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021228

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGTGGTACAACGCCGAAATTTCACCGCCGGGGACGGGAAATACCTCGATTCCAGCAGCGGTGGCTCAGCCCTGTCTTCCGTCACCGGCCGATCTTCAAGAGAAGCAGCTTTCCTCCCGCAAGTGGTCCAATCGCCATGGCGAACGGCGCATCGTCGATTCTTCACAAAAACAGGACATGCCTCCGGAGCATGTGAGGAAGATCATCAAAGAGCATGGCGACATGTCGTCTAAGAAGTACCGGCACGACAAGCGGGTCTACCTGGGAGCCCTCAAGTTCGTTCCTCACGCCGTGTACAAGCTCCTCGAGAATATGCCGATGCCGTGGGAGCAGGTTGTGGAGCCGATCTACATGGCCCAATGGGCCACAATATGGATCATGATGAGGAGGGAGAAGAGGGATCGCCGGCATTTCAAGAGGATGAGGTTTCCACCGTTCGATGATGAGGAGCCTGTGTTGGATTATGCAGATAATTTGTTGGATGTTGAGCCTCTTGAGCCGATTCAGCTGGAGCTTGATGCCGAAGAGGATTCGGCTGTGTATGACTGGTTTTATGACCATAAACCTCTTGTGAAGACAAGGCTGATCAACGGCCTGACCTACCGGAAGTGGCAGCTCTCGCTGCCGATTATGGAAGCTCTTTACCGGCTTTCAGGACAGGTAATTTCCGATTTGACTGATCGGAACTATTTCTATTTGTTTGATAAGGAGTCGTTTCTGACAGCCAAGGCATTGAATATGTGTATACCAGGTGGGCCGAAATTCGAGCCATTGTTTAGGGATATGGAGCAAGGGGAGGAGGATTGGAATGAGTTTAATGACATAAACAAGCTCATTATTCGGTCTCCGCTGAGATCAGAGTACAAAATTGCATTCCCTAATCTTTACAACAACAGGCCAAGGAAGGTAAAGCTCTCTGTTTATCACACACCAATGGTTATGCATATTAAAACTGAGGATCCTGACCTGCCTGCATTTTATTATGATCCATTGCTAAACCCAATACCCGGCACTAACAGGAGTAGTTATGATAATAGTCAGGAAGATGGTGATTTTGTTTTGCTTGAAGGGGTGGAACCTCTTTTGAGTCATACTCAGCTTTATACTGACACCACTGCTGCTGGGATTTCCCTGTTTTTTGCTCCACGACCTTTTAACTTGAGGTCTGGTCGGACTCGTCGGGCAGAAGATATACCTCTTATGTCCGAGTGGTTTAAGGAGCATTGTCCTCGGTCATATCCTGTTAAAGGTCATAACATGCTAAATCTGTTGATACATAGGAAAGGTCTGAACTACCTTCACCTTGATTATAATTTTAATCTCAAGCCTGTGAAAACCCTGACAACAAAAGAGCGTAAGAAATCTCGGTTTGGTAATTCTTTTCATCTGTTGCGTGAAATCTTGCGGTTGACAAAGCTTGTAGTTGATGCCCAGGTCCATTTCCGTTTGGGGAATATTGATGCCTTTCAATTGGCTGATGGTCTGCAGTACATATTTTCTCATGTTGGTCAGTTAACTGGAATGTACCGTTACAAGTATAGGTTGATGCGGCAGATTAGAATGAGCAAAGATTTGAAGCACTTGATTTACTACCGTTTCAATACTGGGCCGGTCGGGAAAGGGCCGGGATGTGGATTCTGGGCACCAATGTGGAGGGTGTGGTTGTCCTTCCTTCGTGGCATGGTCCCTCTTCTAGAACAGTGGTTGGGAAATTTACTTGCTAGACAATTTGAAGGGCGTCATTCTGTGGCAAAGACAGTAACTAAGCAGCGTGTTGAAAGCAATTTCGAGCAGATGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000244 GO:0000375 GO:0000377 GO:0000386 GO:0000387 GO:0000398 GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0030619 GO:0030620 GO:0030623 GO:0031593 GO:0032496 GO:0032991 GO:0033993 GO:0034097 GO:0034612 GO:0034622 GO:0034641 GO:0036002 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065003 GO:0070530 GO:0070887 GO:0071005 GO:0071007 GO:0071011 GO:0071013 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071345 GO:0071356 GO:0071396 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097157 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:0140030 GO:0140098 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

JAB PRO8NT PROCN PROCT PRP8_domainIV RRM_4 U5_2-snRNA_bdg U6-snRNA_bdg

Protein Analysis

601

Amino Acids

70.55

Weight (kDa)

9.22

Isoelectric Point (pI)

49.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRO8NT	PF08082	57 - 112	2.2e-28	PRO8NT (NUC069), PrP8 N-terminal domain
PRO8NT	PF08082	111 - 186	3e-36	PRO8NT (NUC069), PrP8 N-terminal domain
PROCN	PF08083	370 - 416	5.4e-11	PROCN (NUC071) domain
PROCN	PF08083	416 - 597	4.7e-107	PROCN (NUC071) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80070 AT4G38780
fragaria_vesca	FvH4_6g29610 FvH4_6g43880
malus_domestica	MD00G1072300.v1.1 MD09G1102200.v1.1 MD09G1102300.v1.1 MD09G1102400.v1.1 MD09G1127100.v1.1 MD09G1127300.v1.1 MD17G1212800.v1.1
prunus_persica	Prupe.3G088200_v2.0.a1 Prupe.3G223400_v2.0.a1 Prupe.7G079800_v2.0.a1
pyrus_communis	pycom12419g00050 pycom12419g00060 pycom12419g00070 pycom12419g00080 pycom17g21760 pycom17g21770 pycom17g21780
rosa_chinensis	RchiOBHm_Chr2g0122691 RchiOBHm_Chr2g0135211 RchiOBHm_Chr2g0160631
rosa_laevigata	RLG00000019448 RLG00000021228 RLG00000021230 RLG00000021231 RLG00000028917 RLG00000028918
rosa_multiflora	Rmu_co8242217.1_g000001 Rmu_co8276149.1_g000001 Rmu_sc0000019.1_g000004 Rmu_sc0000674.1_g000029 Rmu_sc0006535.1_g000005 Rmu_sc0011943.1_g000004 Rmu_sc0018128.1_g000001 Rmu_sc0032732.1_g000001 Rmu_sc0040913.1_g000001 Rmu_sc0040914.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037020 Rroxscaffold_2G00089540 Rroxscaffold_2G00109400 Rroxscaffold_2G00121310 Rroxscaffold_4G00310000
rosa_rugosa	Rorug01G0172000 Rorug02G0323800 Rorug02G0484400 Rorug02G0484500 Rorug02G0484600
rosa_samantha	Rh1AG188300 Rh1BG154600 Rh1CG174100 Rh1DG068500 Rh2AG309100 Rh2AG371100 Rh2AG549500 Rh2AG549600 Rh2BG307900 Rh2BG380400 Rh2BG563900 Rh2CG286100 Rh2CG359700 Rh2CG534200 Rh2DG397000 Rh2DG572900 Rh2DG573000
rosa_wichuraiana	Rw2G030580 Rw2G045520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1311
AasI	GACNNNNNNGTC	1 cut(s)	254
Acc36I	ACCTGC	2 cut(s)	322, 975
AccB1I	GGYRCC	1 cut(s)	1642
AccB7I	CCANNNNNTGG	1 cut(s)	372
AccI	GTMKAC	2 cut(s)	258, 745
AccIII	TCCGGA	1 cut(s)	184
AciI	CCGC	7 cut(s)	26, 59, 118, 253, 848, 1405, 1549
AclWI	GGATC	5 cut(s)	383, 408, 953, 966, 980
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	3 cut(s)	18, 761, 1711
AcyI	GRCGYC	1 cut(s)	1738
AdeI	CACNNNGTG	1 cut(s)	292
AfaI	GTAC	6 cut(s)	8, 239, 296, 863, 1490, 1526
AfiI	CCNNNNNNNGG	6 cut(s)	35, 123, 372, 1007, 1247, 1631
AflIII	ACRYGT	1 cut(s)	222
AgsI	TTSAA	9 cut(s)	98, 415, 736, 1067, 1469, 1576, 1600, 1733, 1778
AhdI	GACNNNNNGTC	1 cut(s)	226
AjnI	CCWGG	3 cut(s)	261, 748, 1431
AleI	CACNNNNGTG	1 cut(s)	1648
Alw26I	GTCTC	1 cut(s)	849
AlwI	GGATC	5 cut(s)	383, 408, 953, 966, 980
Ama87I	CYCGRG	1 cut(s)	305
Aor13HI	TCCGGA	1 cut(s)	184
AoxI	GGCC	8 cut(s)	87, 354, 363, 592, 755, 896, 1607, 1622
ApeKI	GCWGC	6 cut(s)	56, 106, 613, 622, 1118, 1768
ApoI	RAATTY	3 cut(s)	18, 761, 1711
Asp700I	GAANNNNTTC	1 cut(s)	689
AspLEI	GCGC	1 cut(s)	150
AspS9I	GGNCC	8 cut(s)	126, 355, 363, 755, 1435, 1607, 1622, 1684
AsuC2I	CCSGG	3 cut(s)	30, 1008, 1626
AsuHPI	GGTGA	4 cut(s)	15, 75, 1061, 1292
AvaI	CYCGRG	1 cut(s)	305
AvaII	GGWCC	3 cut(s)	126, 1435, 1684
BaeGI	GKGCMC	1 cut(s)	1645
BamHI	GGATCC	1 cut(s)	958
BanI	GGYRCC	1 cut(s)	1642
BanII	GRGCYC	1 cut(s)	271
BbsI	GAAGAC	2 cut(s)	68, 581
BbvI	GCAGC	6 cut(s)	68, 118, 609, 625, 1105, 1780
BccI	CCATC	2 cut(s)	1040, 1472
BceAI	ACGGC	4 cut(s)	161, 275, 307, 607
BcgI	CGANNNNNNTGC	2 cut(s)	1211, 1245
BciT130I	CCWGG	3 cut(s)	263, 750, 1433
BclI	TGATCA	1 cut(s)	585
BcnI	CCSGG	3 cut(s)	30, 1008, 1626
BcoDI	GTCTC	1 cut(s)	849
BfaI	CTAG	2 cut(s)	1694, 1722
BfmI	CTRYAG	1 cut(s)	1484
BfuAI	ACCTGC	2 cut(s)	322, 975
BglI	GCCNNNNNGGC	1 cut(s)	362
BisI	GCNGC	7 cut(s)	57, 107, 614, 623, 1119, 1550, 1769
BlpI	GCTNAGC	1 cut(s)	66
BlsI	GCNGC	7 cut(s)	58, 108, 615, 624, 1120, 1551, 1770
Bme1390I	CCNGG	6 cut(s)	30, 263, 750, 1008, 1433, 1626
Bme18I	GGWCC	3 cut(s)	126, 1435, 1684
BmeRI	GACNNNNNGTC	1 cut(s)	226
BmeT110I	CYCGRG	1 cut(s)	305
BmgT120I	GGNCC	8 cut(s)	126, 355, 363, 755, 1435, 1607, 1622, 1684
BmiI	GGNNCC	7 cut(s)	268, 342, 450, 960, 1077, 1644, 1686
BmrFI	CCNGG	6 cut(s)	30, 263, 750, 1008, 1433, 1626
BmrI	ACTGGG	1 cut(s)	1614
BmsI	GCATC	6 cut(s)	159, 309, 508, 1417, 1450, 1536
BmuI	ACTGGG	1 cut(s)	1614
BpiI	GAAGAC	2 cut(s)	68, 581
BplI	GAGNNNNNCTC	2 cut(s)	1078, 1110
BpmI	CTGGAG	1 cut(s)	530
Bpu1102I	GCTNAGC	1 cut(s)	66
BpuEI	CTTGAG	4 cut(s)	257, 515, 1180, 1307
BpuMI	CCSGG	3 cut(s)	30, 1008, 1626
BsaHI	GRCGYC	1 cut(s)	1738
BsaI	GGTCTC	1 cut(s)	849
BsaJI	CCNNGG	8 cut(s)	29, 136, 262, 323, 726, 899, 1229, 1431
BsaWI	WCCGGW	2 cut(s)	184, 603
BsaXI	ACNNNNNCTCC	2 cut(s)	440, 470
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 123, 372, 1007, 1247, 1631
Bse118I	RCCGGY	5 cut(s)	85, 240, 405, 645, 1609
Bse1I	ACTGG	3 cut(s)	551, 1522, 1609
Bse3DI	GCAATG	1 cut(s)	989
BseAI	TCCGGA	1 cut(s)	184
BseBI	CCWGG	3 cut(s)	263, 750, 1433
BseDI	CCNNGG	8 cut(s)	29, 136, 262, 323, 726, 899, 1229, 1431
BseGI	GGATG	3 cut(s)	426, 487, 1634
BseLI	CCNNNNNNNGG	6 cut(s)	35, 123, 372, 1007, 1247, 1631
BseMI	GCAATG	1 cut(s)	989
BseMII	CTCAG	4 cut(s)	80, 842, 945, 1109
BseNI	ACTGG	3 cut(s)	551, 1522, 1609
BseRI	GAGGAG	4 cut(s)	293, 400, 461, 812
BseSI	GKGCMC	1 cut(s)	1645
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	6 cut(s)	68, 118, 609, 625, 1105, 1780
BseYI	CCCAGC	1 cut(s)	1121
Bsh1285I	CGRYCG	2 cut(s)	90, 1614
BshFI	GGCC	8 cut(s)	89, 356, 365, 594, 757, 898, 1609, 1624
BshNI	GGYRCC	1 cut(s)	1642
BsiEI	CGRYCG	2 cut(s)	90, 1614
BsiHKCI	CYCGRG	1 cut(s)	305
BslFI	GGGAC	2 cut(s)	46, 1670
BslI	CCNNNNNNNGG	6 cut(s)	35, 123, 372, 1007, 1247, 1631
BsmAI	GTCTC	1 cut(s)	849
BsmFI	GGGAC	2 cut(s)	46, 1670
BsmI	GAATGC	1 cut(s)	872
BsnI	GGCC	8 cut(s)	89, 356, 365, 594, 757, 898, 1609, 1624
Bso31I	GGTCTC	1 cut(s)	849
BsoBI	CYCGRG	1 cut(s)	305
Bsp1286I	GDGCHC	2 cut(s)	271, 1645
Bsp13I	TCCGGA	1 cut(s)	184
Bsp1407I	TGTACA	1 cut(s)	294
Bsp1720I	GCTNAGC	1 cut(s)	66
Bsp19I	CCATGG	1 cut(s)	136
BspACI	CCGC	7 cut(s)	26, 59, 118, 253, 848, 1405, 1549
BspANI	GGCC	8 cut(s)	89, 356, 365, 594, 757, 898, 1609, 1624
BspCNI	CTCAG	4 cut(s)	79, 843, 946, 1108
BspEI	TCCGGA	1 cut(s)	184
BspHI	TCATGA	1 cut(s)	378
BspLI	GGNNCC	7 cut(s)	268, 342, 450, 960, 1077, 1644, 1686
BspMAI	CTGCAG	1 cut(s)	1488
BspMI	ACCTGC	2 cut(s)	322, 975
BspPI	GGATC	5 cut(s)	383, 408, 953, 966, 980
BspT107I	GGYRCC	1 cut(s)	1642
BspTNI	GGTCTC	1 cut(s)	849
BsrDI	GCAATG	1 cut(s)	989
BsrFI	RCCGGY	5 cut(s)	85, 240, 405, 645, 1609
BsrGI	TGTACA	1 cut(s)	294
BsrI	ACTGG	3 cut(s)	551, 1522, 1609
BssAI	RCCGGY	5 cut(s)	85, 240, 405, 645, 1609
BssECI	CCNNGG	8 cut(s)	29, 136, 262, 323, 726, 899, 1229, 1431
BssNAI	GTATAC	1 cut(s)	746
BssNI	GRCGYC	1 cut(s)	1738
BssT1I	CCWWGG	3 cut(s)	136, 726, 899
Bst1107I	GTATAC	1 cut(s)	746
Bst2UI	CCWGG	3 cut(s)	263, 750, 1433
Bst4CI	ACNGT	5 cut(s)	435, 1529, 1595, 1701, 1759
Bst6I	CTCTTC	3 cut(s)	389, 519, 1695
BstACI	GRCGYC	1 cut(s)	1738
BstAUI	TGTACA	1 cut(s)	294
BstC8I	GCNNGC	2 cut(s)	407, 972
BstDEI	CTNAG	6 cut(s)	66, 231, 851, 954, 1095, 1764
BstDSI	CCRYGG	2 cut(s)	136, 323
BstENI	CCTNNNNNAGG	1 cut(s)	1245
BstF5I	GGATG	3 cut(s)	426, 487, 1634
BstHHI	GCGC	1 cut(s)	150
BstMAI	GTCTC	1 cut(s)	849
BstMCI	CGRYCG	2 cut(s)	90, 1614
BstNI	CCWGG	3 cut(s)	263, 750, 1433
BstNSI	RCATGY	4 cut(s)	181, 194, 226, 1261
BstSCI	CCNGG	6 cut(s)	28, 261, 748, 1006, 1431, 1624
BstSFI	CTRYAG	1 cut(s)	1484
BstSLI	GKGCMC	1 cut(s)	1645
BstV1I	GCAGC	6 cut(s)	68, 118, 609, 625, 1105, 1780
BstV2I	GAAGAC	2 cut(s)	68, 581
BstX2I	RGATCY	1 cut(s)	958
BstYI	RGATCY	1 cut(s)	958
BstZ17I	GTATAC	1 cut(s)	746
BstZI	CGGCCG	1 cut(s)	87
BsuRI	GGCC	8 cut(s)	89, 356, 365, 594, 757, 898, 1609, 1624
BtgI	CCRYGG	2 cut(s)	136, 323
BtsCI	GGATG	3 cut(s)	426, 487, 1634
BtsI	GCAGTG	1 cut(s)	1113
BtsIMutI	CAGTG	2 cut(s)	1113, 1706
BveI	ACCTGC	2 cut(s)	322, 975
Cac8I	GCNNGC	2 cut(s)	407, 972
CciI	TCATGA	1 cut(s)	378
CfoI	GCGC	1 cut(s)	150
Cfr10I	RCCGGY	5 cut(s)	85, 240, 405, 645, 1609
Cfr13I	GGNCC	8 cut(s)	126, 355, 363, 755, 1435, 1607, 1622, 1684
CseI	GACGC	1 cut(s)	1727
CsiI	ACCWGGT	1 cut(s)	748
Csp6I	GTAC	6 cut(s)	7, 238, 295, 862, 1489, 1525
CviQI	GTAC	6 cut(s)	7, 238, 295, 862, 1489, 1525
DdeI	CTNAG	6 cut(s)	66, 231, 851, 954, 1095, 1764
DraIII	CACNNNGTG	1 cut(s)	292
DrdI	GACNNNNNNGTC	1 cut(s)	254
DriI	GACNNNNNGTC	1 cut(s)	226
DseDI	GACNNNNNNGTC	1 cut(s)	254
EaeI	YGGCCR	1 cut(s)	87
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	3 cut(s)	389, 519, 1695
Eam1105I	GACNNNNNGTC	1 cut(s)	226
EarI	CTCTTC	3 cut(s)	389, 519, 1695
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	3 cut(s)	136, 726, 899
Eco24I	GRGCYC	1 cut(s)	271
Eco31I	GGTCTC	1 cut(s)	849
Eco47I	GGWCC	3 cut(s)	126, 1435, 1684
Eco52I	CGGCCG	1 cut(s)	87
Eco88I	CYCGRG	1 cut(s)	305
EcoNI	CCTNNNNNAGG	1 cut(s)	1245
EcoRII	CCWGG	3 cut(s)	261, 748, 1431
EcoT14I	CCWWGG	3 cut(s)	136, 726, 899
EcoT22I	ATGCAT	1 cut(s)	945
EcoT38I	GRGCYC	1 cut(s)	271
ErhI	CCWWGG	3 cut(s)	136, 726, 899
FaqI	GGGAC	2 cut(s)	46, 1670
FauI	CCCGC	2 cut(s)	125, 246
FbaI	TGATCA	1 cut(s)	585
FblI	GTMKAC	2 cut(s)	258, 745
Fnu4HI	GCNGC	7 cut(s)	57, 107, 614, 623, 1119, 1550, 1769
FokI	GGATG	3 cut(s)	433, 494, 1641
FriOI	GRGCYC	1 cut(s)	271
Fsp4HI	GCNGC	7 cut(s)	57, 107, 614, 623, 1119, 1550, 1769
FspBI	CTAG	2 cut(s)	1694, 1722
GlaI	GCGC	1 cut(s)	149
GluI	GCNGC	7 cut(s)	57, 107, 614, 623, 1119, 1550, 1769
GsaI	CCCAGC	1 cut(s)	1125
GsuI	CTGGAG	1 cut(s)	530
HaeIII	GGCC	8 cut(s)	89, 356, 365, 594, 757, 898, 1609, 1624
HgaI	GACGC	1 cut(s)	1727
HhaI	GCGC	1 cut(s)	150
Hin1I	GRCGYC	1 cut(s)	1738
Hin6I	GCGC	1 cut(s)	148
HinP1I	GCGC	1 cut(s)	148
HincII	GTYRAC	2 cut(s)	1410, 1515
HindII	GTYRAC	2 cut(s)	1410, 1515
HindIII	AAGCTT	1 cut(s)	1415
HinfI	GANTC	8 cut(s)	49, 158, 502, 530, 710, 1087, 1174, 1635
HpaI	GTTAAC	1 cut(s)	1515
HphI	GGTGA	4 cut(s)	15, 75, 1061, 1292
Hpy166II	GTNNAC	5 cut(s)	259, 295, 746, 1410, 1515
Hpy188I	TCNGA	7 cut(s)	670, 684, 720, 859, 1173, 1207, 1290
Hpy8I	GTNNAC	5 cut(s)	259, 295, 746, 1410, 1515
Hpy99I	CGWCG	2 cut(s)	158, 1182
HpyAV	CCTTC	6 cut(s)	898, 1061, 1307, 1678, 1682, 1727
HpyCH4III	ACNGT	5 cut(s)	435, 1529, 1595, 1701, 1759
HpyCH4V	TGCA	5 cut(s)	467, 872, 943, 974, 1486
HpyF3I	CTNAG	6 cut(s)	66, 231, 851, 954, 1095, 1764
Hsp92I	GRCGYC	1 cut(s)	1738
HspAI	GCGC	1 cut(s)	148
Kpn2I	TCCGGA	1 cut(s)	184
KroI	GCCGGC	1 cut(s)	405
KroNI	GCCGGC	1 cut(s)	407
Ksp22I	TGATCA	1 cut(s)	585
KspAI	GTTAAC	1 cut(s)	1515
Lsp1109I	GCAGC	6 cut(s)	68, 118, 609, 625, 1105, 1780
LweI	GCATC	6 cut(s)	159, 309, 508, 1417, 1450, 1536
MabI	ACCWGGT	1 cut(s)	748
MaeI	CTAG	2 cut(s)	1694, 1722
MaeIII	GTNAC	3 cut(s)	81, 1529, 1759
MfeI	CAATTG	1 cut(s)	1469
MflI	RGATCY	1 cut(s)	958
MhlI	GDGCHC	2 cut(s)	271, 1645
MlyI	GAGTC	3 cut(s)	719, 1096, 1168
MmeI	TCCRAC	3 cut(s)	438, 459, 1151
Mph1103I	ATGCAT	1 cut(s)	945
MroI	TCCGGA	1 cut(s)	184
MroNI	GCCGGC	1 cut(s)	405
MroXI	GAANNNNTTC	1 cut(s)	689
MseI	TTAA	7 cut(s)	816, 948, 1155, 1215, 1245, 1317, 1514
MslI	CAYNNNNRTG	2 cut(s)	932, 1648
MspA1I	CMGCKG	3 cut(s)	59, 508, 850
MspR9I	CCNGG	6 cut(s)	30, 263, 750, 1008, 1433, 1626
MunI	CAATTG	1 cut(s)	1469
Mva1269I	GAATGC	1 cut(s)	872
MvaI	CCWGG	3 cut(s)	263, 750, 1433
NaeI	GCCGGC	1 cut(s)	407
NciI	CCSGG	3 cut(s)	30, 1008, 1626
NcoI	CCATGG	1 cut(s)	136
NgoMIV	GCCGGC	1 cut(s)	405
NlaIV	GGNNCC	7 cut(s)	268, 342, 450, 960, 1077, 1644, 1686
NmuCI	GTSAC	1 cut(s)	81
NsiI	ATGCAT	1 cut(s)	945
NspI	RCATGY	4 cut(s)	181, 194, 226, 1261
OliI	CACNNNNGTG	1 cut(s)	1648
PaeR7I	CTCGAG	1 cut(s)	305
PagI	TCATGA	1 cut(s)	378
PciI	ACATGT	1 cut(s)	222
PctI	GAATGC	1 cut(s)	872
PdiI	GCCGGC	1 cut(s)	407
PdmI	GAANNNNTTC	1 cut(s)	689
PfeI	GAWTC	5 cut(s)	49, 158, 502, 530, 1635
PflMI	CCANNNNNTGG	1 cut(s)	372
PkrI	GCNGC	7 cut(s)	58, 108, 615, 624, 1120, 1551, 1770
PleI	GAGTC	3 cut(s)	718, 1095, 1168
PpsI	GAGTC	3 cut(s)	718, 1095, 1168
PscI	ACATGT	1 cut(s)	222
PsiI	TTATAA	1 cut(s)	1311
Psp6I	CCWGG	3 cut(s)	261, 748, 1431
PspFI	CCCAGC	1 cut(s)	1121
PspGI	CCWGG	3 cut(s)	261, 748, 1431
PspN4I	GGNNCC	7 cut(s)	268, 342, 450, 960, 1077, 1644, 1686
PspPI	GGNCC	8 cut(s)	126, 355, 363, 755, 1435, 1607, 1622, 1684
PstI	CTGCAG	1 cut(s)	1488
PsuI	RGATCY	1 cut(s)	958
PvuII	CAGCTG	1 cut(s)	508
RsaI	GTAC	6 cut(s)	8, 239, 296, 863, 1490, 1526
RsaNI	GTAC	6 cut(s)	7, 238, 295, 862, 1489, 1525
RseI	CAYNNNNRTG	2 cut(s)	932, 1648
SaqAI	TTAA	7 cut(s)	816, 948, 1155, 1215, 1245, 1317, 1514
SatI	GCNGC	7 cut(s)	57, 107, 614, 623, 1119, 1550, 1769
Sau96I	GGNCC	8 cut(s)	126, 355, 363, 755, 1435, 1607, 1622, 1684
SchI	GAGTC	3 cut(s)	719, 1096, 1168
ScrFI	CCNGG	6 cut(s)	30, 263, 750, 1008, 1433, 1626
SduI	GDGCHC	2 cut(s)	271, 1645
SexAI	ACCWGGT	1 cut(s)	748
SfaNI	GCATC	6 cut(s)	159, 309, 508, 1417, 1450, 1536
SfcI	CTRYAG	1 cut(s)	1484
SfiI	GGCCNNNNNGGCC	1 cut(s)	362
Sfr274I	CTCGAG	1 cut(s)	305
SinI	GGWCC	3 cut(s)	126, 1435, 1684
SlaI	CTCGAG	1 cut(s)	305
SmiMI	CAYNNNNRTG	2 cut(s)	932, 1648
SmlI	CTYRAG	5 cut(s)	272, 305, 494, 1159, 1322
SmoI	CTYRAG	5 cut(s)	272, 305, 494, 1159, 1322
SsiI	CCGC	7 cut(s)	26, 59, 118, 253, 848, 1405, 1549
SspI	AATATT	1 cut(s)	1456
SspMI	CTAG	2 cut(s)	1694, 1722
StyD4I	CCNGG	6 cut(s)	28, 261, 748, 1006, 1431, 1624
StyI	CCWWGG	3 cut(s)	136, 726, 899
TaaI	ACNGT	5 cut(s)	435, 1529, 1595, 1701, 1759
TaqI	TCGA	6 cut(s)	47, 156, 306, 438, 765, 1788
TaqII	GACCGA	2 cut(s)	831, 1221
TatI	WGTACW	3 cut(s)	294, 861, 1488
TauI	GCSGC	1 cut(s)	1552
TfiI	GAWTC	5 cut(s)	49, 158, 502, 530, 1635
Tru1I	TTAA	7 cut(s)	816, 948, 1155, 1215, 1245, 1317, 1514
Tru9I	TTAA	7 cut(s)	816, 948, 1155, 1215, 1245, 1317, 1514
TscAI	CASTG	2 cut(s)	1120, 1706
TseFI	GTSAC	1 cut(s)	81
TseI	GCWGC	6 cut(s)	56, 106, 613, 622, 1118, 1768
Tsp45I	GTSAC	1 cut(s)	81
TspDTI	ATGAA	1 cut(s)	1373
TspGWI	ACGGA	2 cut(s)	69, 1433
TspRI	CASTG	2 cut(s)	1120, 1706
Van91I	CCANNNNNTGG	1 cut(s)	372
VpaK11BI	GGWCC	3 cut(s)	126, 1435, 1684
XagI	CCTNNNNNAGG	1 cut(s)	1245
XapI	RAATTY	3 cut(s)	18, 761, 1711
XbaI	TCTAGA	1 cut(s)	1693
XceI	RCATGY	4 cut(s)	181, 194, 226, 1261
XhoI	CTCGAG	1 cut(s)	305
XmiI	GTMKAC	2 cut(s)	258, 745
XmnI	GAANNNNTTC	1 cut(s)	689
XspI	CTAG	2 cut(s)	1694, 1722
Zsp2I	ATGCAT	1 cut(s)	945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.