RLG00000029524

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
39852168 .. 39853837
1670 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029524

Sequence Viewer

Length: 453 bp
ATGAAAAGCAAGAGACCCCTAGCGGCTCGAGACTCTTCAATCTTCATTTTCTCATCGGATGACATCGTTTTGAAGTCTCGGAATGACAGACGCCTGTACCGATTAATCAAGCTCGAGAATGGCCTCACTGCATTGCTAGTTCACGATCCTGAGATTGGAGAATCCCAACTCTTCGAGGGCTCTGAGGAAGACGACGATAGTGAAGGAGAGGATGAAGATGAACTGAATAAGAAAAAGGGAGGGGATTCTCGAACTAACAAGGGAGCAGCAGCAATGTGTGTAGGAATAGGCAGCTTCCTTGACCCTCCTGAGGCACAAGGGCTTGCACACTTTCTAGAACACATGCTTTTCATGGGGAGTACAGAATTTCCAGATGAAAATGAGTTACTTATCCAAGCACGGAGGGTGTTCAAATCCATATGCAAAAGTAGAGCATACTTGCTACCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

151

Amino Acids

16.82

Weight (kDa)

4.93

Isoelectric Point (pI)

43.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 84 - 129 4.3e-11 Insulinase (Peptidase family M16)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 23
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 1 cut(s) 365
AcyI GRCGYC 1 cut(s) 91
AfaI GTAC 2 cut(s) 98, 361
AfiI CCNNNNNNNGG 2 cut(s) 155, 310
AgsI TTSAA 3 cut(s) 39, 73, 412
AluBI AGCT 2 cut(s) 112, 294
AluI AGCT 2 cut(s) 112, 294
Alw26I GTCTC 3 cut(s) 7, 24, 81
AlwI GGATC 1 cut(s) 140
Ama87I CYCGRG 2 cut(s) 27, 113
AoxI GGCC 1 cut(s) 121
ApeKI GCWGC 3 cut(s) 266, 269, 291
ApoI RAATTY 1 cut(s) 365
AseI ATTAAT 1 cut(s) 104
AvaI CYCGRG 2 cut(s) 27, 113
AxyI CCTNAGG 1 cut(s) 309
BaeI ACNNNNGTAYC 2 cut(s) 80, 113
BanII GRGCYC 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 195
BbvI GCAGC 3 cut(s) 278, 281, 303
BcoDI GTCTC 3 cut(s) 7, 24, 81
BfaI CTAG 3 cut(s) 20, 137, 335
BisI GCNGC 4 cut(s) 24, 267, 270, 292
BlsI GCNGC 4 cut(s) 25, 268, 271, 293
BmeT110I CYCGRG 2 cut(s) 27, 113
BpiI GAAGAC 1 cut(s) 195
BsaHI GRCGYC 1 cut(s) 91
BsaI GGTCTC 1 cut(s) 7
Bsc4I CCNNNNNNNGG 2 cut(s) 155, 310
Bse21I CCTNAGG 1 cut(s) 309
Bse3DI GCAATG 2 cut(s) 131, 279
BseGI GGATG 2 cut(s) 64, 217
BseLI CCNNNNNNNGG 2 cut(s) 155, 310
BseMI GCAATG 2 cut(s) 131, 279
BseMII CTCAG 3 cut(s) 141, 174, 300
BseXI GCAGC 3 cut(s) 278, 281, 303
BshFI GGCC 1 cut(s) 123
BsiHKCI CYCGRG 2 cut(s) 27, 113
BslI CCNNNNNNNGG 2 cut(s) 155, 310
BsmAI GTCTC 3 cut(s) 7, 24, 81
BsnI GGCC 1 cut(s) 123
Bso31I GGTCTC 1 cut(s) 7
BsoBI CYCGRG 2 cut(s) 27, 113
Bsp1286I GDGCHC 1 cut(s) 182
Bsp143I GATC 1 cut(s) 145
BspACI CCGC 1 cut(s) 23
BspANI GGCC 1 cut(s) 123
BspCNI CTCAG 3 cut(s) 142, 175, 301
BspPI GGATC 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 7
BsrDI GCAATG 2 cut(s) 131, 279
BssMI GATC 1 cut(s) 145
BssNI GRCGYC 1 cut(s) 91
Bst6I CTCTTC 2 cut(s) 40, 176
BstACI GRCGYC 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 324
BstDEI CTNAG 3 cut(s) 150, 183, 309
BstF5I GGATG 2 cut(s) 64, 217
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 3 cut(s) 7, 24, 81
BstMBI GATC 1 cut(s) 145
BstNSI RCATGY 1 cut(s) 346
BstV1I GCAGC 3 cut(s) 278, 281, 303
BstV2I GAAGAC 1 cut(s) 195
Bsu36I CCTNAGG 1 cut(s) 309
BsuRI GGCC 1 cut(s) 123
BtsCI GGATG 2 cut(s) 64, 217
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 1 cut(s) 126
Cac8I GCNNGC 1 cut(s) 324
CseI GACGC 1 cut(s) 99
Csp6I GTAC 2 cut(s) 97, 360
CviAII CATG 2 cut(s) 343, 352
CviJI RGCY 6 cut(s) 26, 112, 123, 180, 294, 322
CviKI_1 RGCY 6 cut(s) 26, 112, 123, 180, 294, 322
CviQI GTAC 2 cut(s) 97, 360
DdeI CTNAG 3 cut(s) 150, 183, 309
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eam1104I CTCTTC 2 cut(s) 40, 176
EarI CTCTTC 2 cut(s) 40, 176
Eco24I GRGCYC 1 cut(s) 182
Eco31I GGTCTC 1 cut(s) 7
Eco81I CCTNAGG 1 cut(s) 309
Eco88I CYCGRG 2 cut(s) 27, 113
EcoT38I GRGCYC 1 cut(s) 182
FaeI CATG 2 cut(s) 346, 355
FaiI YATR 5 cut(s) 344, 353, 419, 421, 436
FatI CATG 2 cut(s) 342, 351
FauNDI CATATG 1 cut(s) 419
Fnu4HI GCNGC 4 cut(s) 24, 267, 270, 292
FokI GGATG 2 cut(s) 71, 224
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 4 cut(s) 24, 267, 270, 292
FspBI CTAG 3 cut(s) 20, 137, 335
GluI GCNGC 4 cut(s) 24, 267, 270, 292
HaeIII GGCC 1 cut(s) 123
HgaI GACGC 1 cut(s) 99
Hin1I GRCGYC 1 cut(s) 91
Hin1II CATG 2 cut(s) 346, 355
HinfI GANTC 3 cut(s) 32, 161, 245
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 3 cut(s) 58, 81, 184
Hpy188III TCNNGA 8 cut(s) 29, 115, 143, 149, 249, 308, 335, 371
Hpy8I GTNNAC 1 cut(s) 142
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 1 cut(s) 197
HpyCH4V TGCA 3 cut(s) 131, 326, 423
HpyF3I CTNAG 3 cut(s) 150, 183, 309
Hsp92I GRCGYC 1 cut(s) 91
Hsp92II CATG 2 cut(s) 346, 355
Kzo9I GATC 1 cut(s) 145
LmnI GCTCC 1 cut(s) 263
LpnPI CCDG 4 cut(s) 107, 162, 321, 384
Lsp1109I GCAGC 3 cut(s) 278, 281, 303
MaeI CTAG 3 cut(s) 20, 137, 335
MaeIII GTNAC 1 cut(s) 384
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 5 cut(s) 27, 34, 163, 200, 227
MhlI GDGCHC 1 cut(s) 182
MluCI AATT 1 cut(s) 365
MlyI GAGTC 1 cut(s) 26
MnlI CCTC 8 cut(s) 134, 169, 178, 202, 233, 304, 315, 396
MseI TTAA 1 cut(s) 104
NdeI CATATG 1 cut(s) 419
NdeII GATC 1 cut(s) 145
NlaIII CATG 2 cut(s) 346, 355
NspI RCATGY 1 cut(s) 346
PaeR7I CTCGAG 2 cut(s) 27, 113
PcsI WCGNNNNNNNCGW 1 cut(s) 97
PfeI GAWTC 2 cut(s) 161, 245
PkrI GCNGC 4 cut(s) 25, 268, 271, 293
PleI GAGTC 1 cut(s) 26
PpsI GAGTC 1 cut(s) 26
PshBI ATTAAT 1 cut(s) 104
RsaI GTAC 2 cut(s) 98, 361
RsaNI GTAC 2 cut(s) 97, 360
SaqAI TTAA 1 cut(s) 104
SatI GCNGC 4 cut(s) 24, 267, 270, 292
Sau3AI GATC 1 cut(s) 145
SchI GAGTC 1 cut(s) 26
SduI GDGCHC 1 cut(s) 182
SetI ASST 2 cut(s) 114, 296
Sfr274I CTCGAG 2 cut(s) 27, 113
SlaI CTCGAG 2 cut(s) 27, 113
SmlI CTYRAG 2 cut(s) 27, 113
SmoI CTYRAG 2 cut(s) 27, 113
Sse9I AATT 1 cut(s) 365
SsiI CCGC 1 cut(s) 23
SspMI CTAG 3 cut(s) 20, 137, 335
TaqI TCGA 4 cut(s) 28, 114, 174, 250
TasI AATT 1 cut(s) 365
TatI WGTACW 1 cut(s) 359
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 2 cut(s) 161, 245
Tru1I TTAA 1 cut(s) 104
Tru9I TTAA 1 cut(s) 104
TscAI CASTG 1 cut(s) 133
TseI GCWGC 3 cut(s) 266, 269, 291
TspDTI ATGAA 6 cut(s) 17, 34, 228, 234, 340, 390
TspGWI ACGGA 1 cut(s) 415
TspRI CASTG 1 cut(s) 133
VspI ATTAAT 1 cut(s) 104
XapI RAATTY 1 cut(s) 365
XbaI TCTAGA 1 cut(s) 334
XceI RCATGY 1 cut(s) 346
XhoI CTCGAG 2 cut(s) 27, 113
XspI CTAG 3 cut(s) 20, 137, 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.