Rh5DG509800

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000891
Physical Location & Seq
Reverse (-)
79645364 .. 79648662
3299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG509800.1

Sequence Viewer

Length: 222 bp
ATGATGCGCAGCAGCAGCTCAAGAGCAGCTAAAGGTGGAGATGGTGCCTCTGAGACTAAGAAGGCAGCAGCAGCAATTTGCGTTGGAATAGGCAGCTTTTCTGACCCTATGGAAGCACAAGGGCTTGCACACTTTCTTGAACATATGCTCTTCATGGGGAGTACAAAGTTTCCAGTTGAAAATGAGATATGCTTTCATCGAGTACATGTGCTTTTCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

73

Amino Acids

7.82

Weight (kDa)

6.89

Isoelectric Point (pI)

26.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 18 - 63 1.1e-12 Insulinase (Peptidase family M16)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 8
AccB1I GGYRCC 1 cut(s) 44
AfaI GTAC 2 cut(s) 163, 204
AflIII ACRYGT 1 cut(s) 205
AgsI TTSAA 2 cut(s) 140, 179
AluBI AGCT 3 cut(s) 18, 29, 96
AluI AGCT 3 cut(s) 18, 29, 96
Alw26I GTCTC 1 cut(s) 47
ApeKI GCWGC 8 cut(s) 9, 12, 15, 26, 65, 68, 71, 93
AspLEI GCGC 1 cut(s) 9
BanI GGYRCC 1 cut(s) 44
BbvI GCAGC 8 cut(s) 21, 24, 27, 38, 77, 80, 83, 105
BccI CCATC 1 cut(s) 35
BcoDI GTCTC 1 cut(s) 47
BisI GCNGC 8 cut(s) 10, 13, 16, 27, 66, 69, 72, 94
BlsI GCNGC 8 cut(s) 11, 14, 17, 28, 67, 70, 73, 95
BmiI GGNNCC 1 cut(s) 46
BpuEI CTTGAG 1 cut(s) 4
Bse1I ACTGG 1 cut(s) 173
BseMII CTCAG 1 cut(s) 42
BseNI ACTGG 1 cut(s) 173
BseXI GCAGC 8 cut(s) 21, 24, 27, 38, 77, 80, 83, 105
BshNI GGYRCC 1 cut(s) 44
BsmAI GTCTC 1 cut(s) 47
BspCNI CTCAG 1 cut(s) 43
BspLI GGNNCC 1 cut(s) 46
BspQI GCTCTTC 1 cut(s) 155
BspT107I GGYRCC 1 cut(s) 44
BsrI ACTGG 1 cut(s) 173
Bst6I CTCTTC 1 cut(s) 155
BstC8I GCNNGC 1 cut(s) 126
BstDEI CTNAG 2 cut(s) 51, 57
BstHHI GCGC 1 cut(s) 9
BstMAI GTCTC 1 cut(s) 47
BstMWI GCNNNNNNNGC 2 cut(s) 15, 71
BstNSI RCATGY 1 cut(s) 209
BstV1I GCAGC 8 cut(s) 21, 24, 27, 38, 77, 80, 83, 105
Cac8I GCNNGC 1 cut(s) 126
CfoI GCGC 1 cut(s) 9
Csp6I GTAC 2 cut(s) 162, 203
CviAII CATG 2 cut(s) 154, 206
CviJI RGCY 4 cut(s) 18, 29, 96, 124
CviKI_1 RGCY 4 cut(s) 18, 29, 96, 124
CviQI GTAC 2 cut(s) 162, 203
DdeI CTNAG 2 cut(s) 51, 57
Eam1104I CTCTTC 1 cut(s) 155
EarI CTCTTC 1 cut(s) 155
FaeI CATG 2 cut(s) 157, 209
FaiI YATR 6 cut(s) 110, 144, 146, 155, 190, 207
FatI CATG 2 cut(s) 153, 205
FauNDI CATATG 1 cut(s) 144
Fnu4HI GCNGC 8 cut(s) 10, 13, 16, 27, 66, 69, 72, 94
Fsp4HI GCNGC 8 cut(s) 10, 13, 16, 27, 66, 69, 72, 94
FspI TGCGCA 1 cut(s) 8
GlaI GCGC 1 cut(s) 8
GluI GCNGC 8 cut(s) 10, 13, 16, 27, 66, 69, 72, 94
HhaI GCGC 1 cut(s) 9
Hin1II CATG 2 cut(s) 157, 209
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
Hpy188I TCNGA 2 cut(s) 52, 103
Hpy188III TCNNGA 3 cut(s) 21, 137, 219
HpyAV CCTTC 1 cut(s) 55
HpyCH4V TGCA 1 cut(s) 128
HpyF10VI GCNNNNNNNGC 2 cut(s) 15, 71
HpyF3I CTNAG 2 cut(s) 51, 57
Hsp92II CATG 2 cut(s) 157, 209
HspAI GCGC 1 cut(s) 7
LguI GCTCTTC 1 cut(s) 155
LpnPI CCDG 1 cut(s) 186
Lsp1109I GCAGC 8 cut(s) 21, 24, 27, 38, 77, 80, 83, 105
MboII GAAGA 1 cut(s) 142
MluCI AATT 1 cut(s) 75
MmeI TCCRAC 1 cut(s) 64
MnlI CCTC 1 cut(s) 58
MwoI GCNNNNNNNGC 2 cut(s) 15, 71
NdeI CATATG 1 cut(s) 144
NlaIII CATG 2 cut(s) 157, 209
NlaIV GGNNCC 1 cut(s) 46
NsbI TGCGCA 1 cut(s) 8
NspI RCATGY 1 cut(s) 209
PciI ACATGT 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 155
PkrI GCNGC 8 cut(s) 11, 14, 17, 28, 67, 70, 73, 95
PscI ACATGT 1 cut(s) 205
PspN4I GGNNCC 1 cut(s) 46
RsaI GTAC 2 cut(s) 163, 204
RsaNI GTAC 2 cut(s) 162, 203
SapI GCTCTTC 1 cut(s) 155
SatI GCNGC 8 cut(s) 10, 13, 16, 27, 66, 69, 72, 94
SetI ASST 4 cut(s) 20, 31, 37, 98
SgeI CNNG 8 cut(s) 33, 131, 137, 149, 166, 185, 212, 218
SmlI CTYRAG 1 cut(s) 19
SmoI CTYRAG 1 cut(s) 19
Sse9I AATT 1 cut(s) 75
TaqI TCGA 1 cut(s) 199
TasI AATT 1 cut(s) 75
TatI WGTACW 2 cut(s) 161, 202
TseI GCWGC 8 cut(s) 9, 12, 15, 26, 65, 68, 71, 93
TspDTI ATGAA 2 cut(s) 142, 185
XceI RCATGY 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.