Rorug01G0119300

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
20846504 .. 20854392
7889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0119300.1

Sequence Viewer

Length: 5739 bp
ATGTCGACGACTGAGAAGCACTGGTTGCAGATCTTCGAGGGAAAGCAATGGATTATCAACAAGGCCAAGCAGCAGGCCTTCCTCTTCGACCAAGACCTCGCCTCCAAACTCATCATTGCCGGAATTGCCCCTCCTCCTTCTCTTTTCTCCTCCCACCCCGACGTGTTGAACCATCATGAGCTGATTTCAGAAGTTCCACTCCCTTGCACACACCGTGTGATCCCTTTTACTGGTAGTCGTTGCTGTGTGTTCAACAAGCCAGTTGCTACAGCCCACTACGGGCAGCTAACAAATGATTTGTGCACGGAACATTGTGGGGTAAAGAAAGGTTTTGATGTAGGAGGCAATGTATTGGATTTGCCACAGTGCCCAATCAGTAATGGTGGATGCGCCTCCAATGGTGTTCCTCAAGATCATCAAGAAGAGGATCCTAGTGTTACGTCTCCTGAAGATGAGAGGGATGCAAGAGTCTCAGATGCTTACCATGATTCAGCTTTACAACTGGCTAGAGGTGCAGGAGAGGAGGTATCAGCTTTGCCACAGAGCCACATTAGTAATGCTGGGTGTGCTTCTATTGGTGTTCTACAAGACCAGAAAGAAGAGAATTCTGGTGGTACATCTCCTGAAGATCAGAGGAATGCAAAAATGGTACGTATCCCGAAGATCAGTAATGGTGGATGCGCCTCCAATGGTGTTCCTCAAGATCATCAAGAAGAGGATCCTAGTGTTACGTCTCCTGAAGATGAGAGGGATGCAAGAGTCTCAGATGCTTACCATGATTCAGCTTTACAACTGGCTAGAGGTGCAGGAGAGGAGGTATCAGCTTTGCCACAGTGCCACATTAGTAATGCTGGGTGTGCTTCTATTGGTGTTCTACAAGACCAGAAAGAAGAGAATTCTGGTGGTACATCTCCTGAAGATCAGAGGAATGCAAAAATGGTACGTATCCCGAAGATCAGTAATGGTGGATGTGTCTCCAATGGTGTTACTCAAGATCATAGAGAAGAGGATCCTAGTGTTACGTCTCCTGAAGATGAGAGGGATGAAAGAGTCTCAGACGTTTACCATGACTCAGCTTTAACACCGGCTAGAGGTACAGGAGAACGGGTATCAATTTTGCCACAGGGCCACATTAGTGATGCTGGGTGTGCCTTTGATGGTGTTCTACAAGATCACAAAGAAGAAAATCCTGGTGTTACGTCTCCTGAAGATCAGGGGGATGCAAGAATGTTAGACATTTACCTCGACCCAGCTCTTTCACTGGCTAGAGTTCAAAGATCTAAGTCAAGACAAAAGGCTCTGGCAATTCGAAACAGTACACCAAAAAGCTTATCACACGATAAGGGCAATGTTGATGGTTATGCTGGTGAAACTATCAAGTGTCTGATATCTACCCCACAGTCTGAAAATGTCGATGAATTGAATGACAATCATTCTCAAGTGGAAAAACCAAAGATAGGAGAATTTCAAAGCAAGGAAAAAGGTTCTGATATCTACTCTGGTAGAATTACTAGATCTAGAAGCTCTGGCCAACAGGAGAACTCTTTAAATGTCAGTAGCTCTCTATGTATTCACAAAACAAGTGATGGTATAGCTGTTGATTCTATTGGTAAATCGACACGTCTGTCTGACCATGTAATTCACCCACTGGAATTGGTTAGTTACTCTCATGTAACTAATGACAGTTGTCGAGTGGGGGAATTAAAGCCGGGAGACTACTCAAGCAAGGAGAAGCAAACTGTTGAGAAAGATTCTATGTGTGCAAACTTGGAAAGAGAAGAACACTCTCCAAAGGCTTTACAAGAATTCGAAGGTCCTTCAATATCTAAGGATGTTGCTGGGAACTCAATTGTCTGTAGGAGTCCTGTTGAAGAAACACATCTAAATGAGGATCATCACATGATAGAGACGTCTGAATCTTCACCTGAGGCACAGAAGAAAGAGGGCGGAATGGGTTTGGAAGGGGTGGACAGTAGTCCAAATGCTCCGTTCACTTTTTTGCATGAAGAAAAAGAAGCATCAGTTTTCCCAATTTTGATCAGGCAGGCTGCTGGACATGCTCAAGATTCTTTGCTGGAGGAAACAGGAGTAGGACATCCAACTAGCACTAACATTGATGAAGGAAGCCGATGCATAAAAGAGAACCCAGTTGCTCTTCTTCAGGACAATTTAAGACTAGAAAATGCTGAAGATTCATCTTGTGCTAGAAAAACCATGCAGGCACAGAGATTTGATTTTGGAGGGCCCAGCAAATTTTTAGAATTGTCATGTGGTGCTCCACATGTTAAATCCTCACAGTCTGAAAATGTTGGTGAATTGAATGATAATGATTCTGAAGTGGAAAAACAAAAGAAAGGAGAATTTCAAATCAAGGAAGAAGGCACTGACATCTACTCTCGTAGAATTACTAGATCTAGAAGCTCTGGCCATCAGGAGAACTCTTTAAATGCCAGTGGCTTGCCCTGCATTGGCAGGACAAGTAGTGTTATAGCAGTTGATATTGATACTGTGGAACAGTCCTGTTTAAAAGGACTTTCTACTCCTGCTAGTAAGAAGGGGATCCAGGGCAGTTCATTAATAAAATTGCCTCTTTCCTTCATGCATGGGGAAAAGAAACTAGAAGAAGGAATGACCATCAATACCCATGAAAACTGTAACTCATCCCTGGAAATGGATTTTCTGGGCAATTGTGAAGTTTCAGCCAAAGATATGGAGGTCCAGAGCGGTTTAGTCAAAGCCCTTGAAGAGGAGTTCAGTAAATCTAGAAGAGTGTCACATGGCAATGTGATCTCATCAGTAAAAGAATCATTTGATACTTATAAGGATGCAGTTCGTAATACTTTCCTAGGAAGTGGGAAAACTCCGAAACAGAAATGTTCTATGATAGATGATCAAACTCCCTTGCGAGTAGACTGGGATGGTTTGATTCATAGCCCGGTAAAAGAAGTAAAGGGGTCTAATTTGTCTACTGCTAATGCTGCAATACAAACGGAGTTGGTGTCAGAAGACTGTGCAGTGGATTCTAATGCCCTTTGTGATCCTCATAAATCAACATCTGTTGATTTTACTATAGTGTCCGGGCCTGGTTCTCATAGAATCCTAGATGTAGAGATTCTTGAAGTTGAGAACCCTTATGCTGCTTTTAGGGATGAGCTGAGGAGTAACTTGGCTCAGTCGACTGTAAATGCACACATTTCTCCAGAATATGTACAAAGGAGTGCCAGTGATGACAGAGAGGTAGGTTGTTCAGAATCAACTGAATGCCAGATTGCAGAGAACTCCAAAGGAAGAAGTTTTTGGTATTCAATGGAGGGTACATCACCGAAGCTCAAACGAAGAAAGATTGACGATAAAAGAGTTCATGACCTGTCTGCTTCAGTAGCCTTGAGAGAAGAAGTTCTTCACGCTGTCAAAAAAGATCCTATGTGTGGAAACTTGGAAAGAGAAGAACACAGTCCAAAGGCTTTACAACAATTCCAAGGGCGTTCAATTTCTCAGGAGGATGCTGGGAAATTAACTGTCAGTAAGAGTCCTGTTGAAGAAACACATCTAAATGAGAATCACATGGTAGAGAGGTCTGAATCTATACCCGAGGCACAGAAGAAAGAGGGTGGAATGGGTTTGGAAGGGGTGGATGGTAGTCCAAATGCTCCATTCACTTTTTTGCATGAAGAAAAAGAAGCATCAGTTTTCTCAAGATTGATCGAGCAGGCTGCTGGACATCCTTTAGATTCTTTGCTGGATGGTACAGGAGTAGCACTTCCAACTAGCATTAACATTGATAGAGAAAACCAATGCTTAAAAGAGGACCCACTTTGTCTTCATCTTCAGGATGATTTAAGAGTAGAAAATGTTGAAGATTGGCCTTGTGCTGGAAGAACCATGCTTGCAGAAAGATTTGATTTTGGAGGAGCCAGCAACTTTAAAGAATTGTCAGGTGGTGTTCCACATGTTAAATCCTTGGATTTGACTAGTGCGGATGACGCAATGCCTGTACTTGAGAGGTTTGTTATAAAAACAGATGATGAACCATGTAGCATTGCTGAAGAGGGAATTAGCTTTGACGAGTGGAACCTTCCAAACACTGCAGTAGAACGTGCCAGTATTCTGGAGCAGCTTTGCAAATCTGCTTGCATGCAAACTCCCGTAGCCTATTCTTCAGCTTCCTATAAGTTGCATAAAGTTCAAAATCTACCGCAATCTGTTCCAACTGGAGTTTTGGAGCATGTAGATCTGAGGACCACCTTTCCTATAAATGACAATGTCAAGCAATTAAAGGATGGTAATGATTGTTGGAGTGAGGGAGTTGGCCCGGCCTTTTATGGAGGATCCTATTCTGATTGCCTACCAAATTTTAGTGGTCAACCTAGTTGGGATATTAAGAGACCTTATTCCTCTCCTGTTGGGAAACTTTGGGATAGAATTGCTTCAAGCTCTAGTAGTTCGGGGAAGCGAGTGAGCTCAATTCCAGAGCTTGCCTGTATTAGTGAAGAAAATGAGAATACAGATGAGGTAGCTGATACTTTTCAAGATGGCATTGTTTCAGAAGTGTTAGATTGTTCTCCAAAAAGGCCACCGCTTGCAGACATTACAGAAATCCCTAACCTTCCTGCTTCAGTTTCTAAAGCTGCGCCCTACACTGATAGATTTAGTCTAGATTCAGTAACCACCGAATTCAGTTTAACGGGGACTCATAAGAGCATAAAAAAGAAGCCTGGAATCCAAAACAGCAGTAAGAGAAGATATAACAATAAGGAGAACCAGAGTGTATCACGAAAGAGGGCCACCGGATCACTTCAGAATAGGTTCAGCAAGCCAAAGCTTTCTGGAAAAACCAGTTTGAGAAAAGGAGGCCCTAGTTTGTCAGAGCTGGAGCCCAAGCGTAACAATATTGTTTCCAATATTACTTCCTTTATTCCACTTGTGCAACAGAAACAAGCAGCTGCAGCCTTACCAGGGAAAAGGGACATCAAAGTGAAGGCCCTGGAGGCCGCTGAAGCTGCAAAGCGTCTTGCAGAAAGGAAAGACAATGAACGTAAGATGAAGAAAGAAGCTATGAAGGTTGAGCGAGCAAGAGTGGAGCAAGAGAATCTGAGGAAGTTGGAGCTGCAGAGGAAAAGGAAAGAAGAGGAGAGGAAGAAAAATGAGGCTTATATGGCAGCAAAGAAGAGAGAAAGGGAAGAGGAAGATAAAAAGGAGAAGCAAAGAAAAAGGATGCGTGTTGAAGAAGGGCGGAGGGAGCAGAGAGAACATGAAGACAAGTTACGTGTGGAAAAAGATGGAAGATGTGAGAGTAAGGACTTAAAATGCAATACCGTGCATAAGAAAATGGACAAAGTAAGGGAACATGACACTCTCAGGAGCATTTCAGAGAGTGATCCTAGGAGTTCCTGTGTTTCAGCAAATAATGCCAGAAGTGGAACAGCTGTCCATGAAGAGGACTATAAGGGCTTCAGTAATTTTGAGCATAAGGAAGAGAGTAATTTAGACAAAGCCACAGAAAATGAGAAATTGGTTGGGAAGATGAGTCGAGAACAGTCTTATGATATCTCTCCATACAAAGAATCAGATGATGAAAACGACGAAGATGACGATAGTATACCAAATAATAAATTTATTCCTTCGTGGGCAAGCAAAAATTGCCTGGCTCTGGTTGCTTCTCGCCAGAGTAGAACTGACCCAGAAGTGTTCTTCCCTCCCAAAAGCTTTCCCTGTGTATCTGAAGTTCTGTTGCTTTGA

Protein Analysis

1912

Amino Acids

210.36

Weight (kDa)

5.35

Isoelectric Point (pI)

56.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
INCENP_ARK-bind PF03941 1856 - 1905 4.1e-06 Inner centromere protein, ARK binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2820, 4013
AasI GACNNNNNNGTC 1 cut(s) 1624
AatII GACGTC 1 cut(s) 1913
AccBSI CCGCTC 1 cut(s) 2724
AccI GTMKAC 5 cut(s) 5, 2910, 2966, 3176, 5599
AciI CCGC 7 cut(s) 1947, 2724, 3977, 4196, 4577, 4992, 5233
AcoI YGGCCR 2 cut(s) 1528, 2425
AcsI RAATTY 9 cut(s) 604, 895, 1463, 1805, 2252, 2360, 4351, 4673, 5612
AcyI GRCGYC 1 cut(s) 1910
AdeI CACNNNGTG 2 cut(s) 215, 217
AflIII ACRYGT 5 cut(s) 162, 1619, 2281, 3949, 5266
AhlI ACTAGT 1 cut(s) 3971
AjiI CACGTC 2 cut(s) 163, 1622
AjnI CCWGG 8 cut(s) 1189, 2562, 2664, 3082, 4714, 4954, 4983, 5643
AjuI GAANNNNNNNTTGG 2 cut(s) 3280, 3312
AleI CACNNNNGTG 1 cut(s) 1134
Alw21I GWGCWC 3 cut(s) 305, 2278, 4463
Alw44I GTGCAC 1 cut(s) 301
Ama87I CYCGRG 1 cut(s) 3590
ApaI GGGCCC 1 cut(s) 2247
ApaLI GTGCAC 1 cut(s) 301
ApoI RAATTY 9 cut(s) 604, 895, 1463, 1805, 2252, 2360, 4351, 4673, 5612
AseI ATTAAT 1 cut(s) 2576
Asp700I GAANNNNTTC 4 cut(s) 3396, 3399, 4426, 4805
AspA2I CCTAGG 2 cut(s) 2845, 5381
AspLEI GCGC 3 cut(s) 392, 683, 4633
AsuC2I CCSGG 4 cut(s) 1710, 2936, 3079, 4313
AsuHPI GGTGA 5 cut(s) 1379, 1634, 1914, 2324, 3312
AsuII TTCGAA 2 cut(s) 1309, 1809
AvaI CYCGRG 1 cut(s) 3590
AvaII GGWCC 4 cut(s) 1814, 2716, 3808, 4239
AvrII CCTAGG 2 cut(s) 2845, 5381
AxyI CCTNAGG 1 cut(s) 1926
BaeGI GKGCMC 3 cut(s) 305, 371, 2247
BaeI ACNNNNGTAYC 2 cut(s) 3738, 3771
BalI TGGCCA 2 cut(s) 1530, 2427
BamHI GGATCC 5 cut(s) 427, 718, 1009, 2559, 4328
BanII GRGCYC 3 cut(s) 2247, 4463, 4878
BarI GAAGNNNNNNTAC 2 cut(s) 5247, 5279
BbsI GAAGAC 3 cut(s) 3012, 3812, 5262
Bbv12I GWGCWC 3 cut(s) 305, 2278, 4463
BbvCI CCTCAGC 1 cut(s) 3155
BcgI CGANNNNNNTGC 2 cut(s) 3695, 3729
BciT130I CCWGG 8 cut(s) 1191, 2564, 2666, 3084, 4716, 4956, 4985, 5645
BciVI GTATCC 2 cut(s) 665, 956
BclI TGATCA 2 cut(s) 2037, 2890
BcnI CCSGG 4 cut(s) 1710, 2936, 3079, 4313
BcuI ACTAGT 1 cut(s) 3971
BfmI CTRYAG 6 cut(s) 267, 1855, 3069, 4086, 4944, 5108
BfuI GTATCC 2 cut(s) 665, 956
BglI GCCNNNNNGGC 1 cut(s) 4988
BglII AGATCT 5 cut(s) 30, 1277, 1514, 2411, 4231
BlnI CCTAGG 2 cut(s) 2845, 5381
Bme18I GGWCC 4 cut(s) 1814, 2716, 3808, 4239
BmeT110I CYCGRG 1 cut(s) 3590
BmgBI CACGTC 2 cut(s) 163, 1622
BmrI ACTGGG 2 cut(s) 2141, 2923
BmuI ACTGGG 2 cut(s) 2141, 2923
BoxI GACNNNNGTC 2 cut(s) 1686, 1974
BpiI GAAGAC 3 cut(s) 3012, 3812, 5262
BpmI CTGGAG 6 cut(s) 2096, 3183, 4130, 4233, 4892, 5006
Bpu10I CCTNAGC 1 cut(s) 3155
Bpu14I TTCGAA 2 cut(s) 1309, 1809
BpuEI CTTGAG 9 cut(s) 393, 684, 975, 1422, 1705, 2046, 3406, 3679, 4019
BpuMI CCSGG 4 cut(s) 1710, 2936, 3079, 4313
BsaAI YACGTR 3 cut(s) 653, 944, 5267
BsaHI GRCGYC 1 cut(s) 1910
BsaI GGTCTC 1 cut(s) 4378
BsaJI CCNNGG 9 cut(s) 2563, 2664, 2845, 3478, 3591, 3960, 4955, 4983, 5381
BsaWI WCCGGW 1 cut(s) 4787
Bse118I RCCGGY 1 cut(s) 1084
Bse21I CCTNAGG 1 cut(s) 1926
Bse3DI GCAATG 7 cut(s) 53, 114, 352, 1354, 2788, 3993, 4038
BseBI CCWGG 8 cut(s) 1191, 2564, 2666, 3084, 4716, 4956, 4985, 5645
BseDI CCNNGG 9 cut(s) 2563, 2664, 2845, 3478, 3591, 3960, 4955, 4983, 5381
BseMI GCAATG 7 cut(s) 53, 114, 352, 1354, 2788, 3993, 4038
BseRI GAGGAG 8 cut(s) 123, 139, 536, 827, 2762, 3172, 3924, 5144
BseSI GKGCMC 3 cut(s) 305, 371, 2247
BseYI CCCAGC 7 cut(s) 560, 851, 1142, 1249, 1838, 2246, 3506
BsgI GTGCAG 3 cut(s) 534, 825, 3033
BsiHKAI GWGCWC 3 cut(s) 305, 2278, 4463
BsiHKCI CYCGRG 1 cut(s) 3590
BsiSI CCGG 7 cut(s) 120, 1085, 1709, 2936, 3078, 4313, 4788
BslFI GGGAC 2 cut(s) 4702, 4979
BsmBI CGTCTC 5 cut(s) 447, 738, 1029, 1206, 1901
BsmFI GGGAC 2 cut(s) 4702, 4979
BsmI GAATGC 3 cut(s) 643, 934, 3266
Bso31I GGTCTC 1 cut(s) 4378
BsoBI CYCGRG 1 cut(s) 3590
Bsp119I TTCGAA 2 cut(s) 1309, 1809
Bsp120I GGGCCC 1 cut(s) 2243
Bsp1286I GDGCHC 6 cut(s) 305, 371, 2247, 2278, 4463, 4878
Bsp1407I TGTACA 1 cut(s) 3208
BspACI CCGC 7 cut(s) 1947, 2724, 3977, 4196, 4577, 4992, 5233
BspHI TCATGA 2 cut(s) 175, 3361
BspMAI CTGCAG 3 cut(s) 4090, 4948, 5112
BspQI GCTCTTC 1 cut(s) 2160
BspT104I TTCGAA 2 cut(s) 1309, 1809
BspTNI GGTCTC 1 cut(s) 4378
BsrBI CCGCTC 1 cut(s) 2724
BsrDI GCAATG 7 cut(s) 53, 114, 352, 1354, 2788, 3993, 4038
BsrFI RCCGGY 1 cut(s) 1084
BsrGI TGTACA 1 cut(s) 3208
BssAI RCCGGY 1 cut(s) 1084
BssECI CCNNGG 9 cut(s) 2563, 2664, 2845, 3478, 3591, 3960, 4955, 4983, 5381
BssNAI GTATAC 1 cut(s) 5600
BssNI GRCGYC 1 cut(s) 1910
BssT1I CCWWGG 4 cut(s) 2845, 3478, 3960, 5381
Bst1107I GTATAC 1 cut(s) 5600
Bst2UI CCWGG 8 cut(s) 1191, 2564, 2666, 3084, 4716, 4956, 4985, 5645
BstACI GRCGYC 1 cut(s) 1910
BstAPI GCANNNNNTGC 3 cut(s) 25, 5408, 5640
BstAUI TGTACA 1 cut(s) 3208
BstBAI YACGTR 3 cut(s) 653, 944, 5267
BstBI TTCGAA 2 cut(s) 1309, 1809
BstENI CCTNNNNNAGG 1 cut(s) 2744
BstHHI GCGC 3 cut(s) 392, 683, 4633
BstNI CCWGG 8 cut(s) 1191, 2564, 2666, 3084, 4716, 4956, 4985, 5645
BstNSI RCATGY 5 cut(s) 2060, 2285, 3953, 4138, 4229
BstPAI GACNNNNGTC 2 cut(s) 1686, 1974
BstSFI CTRYAG 6 cut(s) 267, 1855, 3069, 4086, 4944, 5108
BstSLI GKGCMC 3 cut(s) 305, 371, 2247
BstSNI TACGTA 2 cut(s) 653, 944
BstV2I GAAGAC 3 cut(s) 3012, 3812, 5262
BstXI CCANNNNNNTGG 2 cut(s) 2710, 4108
BstZ17I GTATAC 1 cut(s) 5600
Bsu36I CCTNAGG 1 cut(s) 1926
BsuI GTATCC 2 cut(s) 665, 956
BtrI CACGTC 2 cut(s) 163, 1622
BtsI GCAGTG 2 cut(s) 3021, 4083
CciI TCATGA 2 cut(s) 175, 3361
CfoI GCGC 3 cut(s) 392, 683, 4633
Cfr10I RCCGGY 1 cut(s) 1084
CseI GACGC 2 cut(s) 3992, 4997
CspCI CAANNNNNGTGG 2 cut(s) 1635, 1670
DraI TTTAAA 4 cut(s) 1548, 2445, 2526, 3925
DraIII CACNNNGTG 2 cut(s) 215, 217
DrdI GACNNNNNNGTC 1 cut(s) 1624
DseDI GACNNNNNNGTC 1 cut(s) 1624
EaeI YGGCCR 2 cut(s) 1528, 2425
EciI GGCGGA 2 cut(s) 1962, 5248
Ecl136II GAGCTC 1 cut(s) 4461
Eco105I TACGTA 2 cut(s) 653, 944
Eco130I CCWWGG 4 cut(s) 2845, 3478, 3960, 5381
Eco147I AGGCCT 1 cut(s) 77
Eco24I GRGCYC 3 cut(s) 2247, 4463, 4878
Eco31I GGTCTC 1 cut(s) 4378
Eco32I GATATC 3 cut(s) 1389, 1492, 5548
Eco47I GGWCC 4 cut(s) 1814, 2716, 3808, 4239
Eco53kI GAGCTC 1 cut(s) 4461
Eco81I CCTNAGG 1 cut(s) 1926
Eco88I CYCGRG 1 cut(s) 3590
EcoICRI GAGCTC 1 cut(s) 4461
EcoNI CCTNNNNNAGG 1 cut(s) 2744
EcoO109I RGGNCCY 5 cut(s) 1814, 2243, 3808, 4853, 4981
EcoRI GAATTC 4 cut(s) 604, 895, 1805, 4673
EcoRII CCWGG 8 cut(s) 1189, 2562, 2664, 3082, 4714, 4954, 4983, 5643
EcoRV GATATC 3 cut(s) 1389, 1492, 5548
EcoT14I CCWWGG 4 cut(s) 2845, 3478, 3960, 5381
EcoT22I ATGCAT 2 cut(s) 2135, 2604
EcoT38I GRGCYC 3 cut(s) 2247, 4463, 4878
ErhI CCWWGG 4 cut(s) 2845, 3478, 3960, 5381
Esp3I CGTCTC 5 cut(s) 447, 738, 1029, 1206, 1901
FalI AAGNNNNNCTT 2 cut(s) 3384, 3416
FaqI GGGAC 2 cut(s) 4702, 4979
FbaI TGATCA 2 cut(s) 2037, 2890
FblI GTMKAC 5 cut(s) 5, 2910, 2966, 3176, 5599
FriOI GRGCYC 3 cut(s) 2247, 4463, 4878
GlaI GCGC 3 cut(s) 391, 682, 4632
GsaI CCCAGC 7 cut(s) 564, 855, 1146, 1253, 1842, 2250, 3510
GsuI CTGGAG 6 cut(s) 2096, 3183, 4130, 4233, 4892, 5006
HapII CCGG 7 cut(s) 120, 1085, 1709, 2936, 3078, 4313, 4788
HgaI GACGC 2 cut(s) 3992, 4997
HhaI GCGC 3 cut(s) 392, 683, 4633
Hin1I GRCGYC 1 cut(s) 1910
Hin6I GCGC 3 cut(s) 390, 681, 4631
HinP1I GCGC 3 cut(s) 390, 681, 4631
HincII GTYRAC 3 cut(s) 6, 3177, 4364
HindII GTYRAC 3 cut(s) 6, 3177, 4364
HindIII AAGCTT 3 cut(s) 1327, 4820, 5704
HpaII CCGG 7 cut(s) 120, 1085, 1709, 2936, 3078, 4313, 4788
HphI GGTGA 5 cut(s) 1379, 1634, 1914, 2324, 3312
Hpy99I CGWCG 3 cut(s) 10, 164, 5585
Hsp92I GRCGYC 1 cut(s) 1910
HspAI GCGC 3 cut(s) 390, 681, 4631
Ksp22I TGATCA 2 cut(s) 2037, 2890
LguI GCTCTTC 1 cut(s) 2160
MbiI CCGCTC 1 cut(s) 2724
MfeI CAATTG 2 cut(s) 1848, 2686
MhlI GDGCHC 6 cut(s) 305, 371, 2247, 2278, 4463, 4878
MlsI TGGCCA 2 cut(s) 1530, 2427
MluNI TGGCCA 2 cut(s) 1530, 2427
MlyI GAGTC 8 cut(s) 477, 768, 1059, 1064, 1870, 3538, 4684, 5536
MmeI TCCRAC 5 cut(s) 2123, 3788, 4232, 4274, 5082
Mox20I TGGCCA 2 cut(s) 1530, 2427
Mph1103I ATGCAT 2 cut(s) 2135, 2604
MroXI GAANNNNTTC 4 cut(s) 3396, 3399, 4426, 4805
MscI TGGCCA 2 cut(s) 1530, 2427
MslI CAYNNNNRTG 5 cut(s) 1134, 1884, 2781, 3552, 4973
Msp20I TGGCCA 2 cut(s) 1530, 2427
MspA1I CMGCKG 3 cut(s) 4943, 4994, 5426
MspI CCGG 7 cut(s) 120, 1085, 1709, 2936, 3078, 4313, 4788
MunI CAATTG 2 cut(s) 1848, 2686
Mva1269I GAATGC 3 cut(s) 643, 934, 3266
MvaI CCWGG 8 cut(s) 1191, 2564, 2666, 3084, 4716, 4956, 4985, 5645
NciI CCSGG 4 cut(s) 1710, 2936, 3079, 4313
NmuCI GTSAC 1 cut(s) 2772
NsiI ATGCAT 2 cut(s) 2135, 2604
NspI RCATGY 5 cut(s) 2060, 2285, 3953, 4138, 4229
NspV TTCGAA 2 cut(s) 1309, 1809
OliI CACNNNNGTG 1 cut(s) 1134
PaeI GCATGC 1 cut(s) 4138
PagI TCATGA 2 cut(s) 175, 3361
PceI AGGCCT 1 cut(s) 77
PciI ACATGT 2 cut(s) 2281, 3949
PciSI GCTCTTC 1 cut(s) 2160
PcsI WCGNNNNNNNCGW 1 cut(s) 5589
PctI GAATGC 3 cut(s) 643, 934, 3266
PdmI GAANNNNTTC 4 cut(s) 3396, 3399, 4426, 4805
PflFI GACNNNGTC 1 cut(s) 4262
PleI GAGTC 8 cut(s) 476, 767, 1058, 1064, 1869, 3537, 4684, 5535
PpsI GAGTC 8 cut(s) 476, 767, 1058, 1064, 1869, 3537, 4684, 5535
Ppu21I YACGTR 3 cut(s) 653, 944, 5267
PpuMI RGGWCCY 2 cut(s) 1814, 3808
PscI ACATGT 2 cut(s) 2281, 3949
PshAI GACNNNNGTC 2 cut(s) 1686, 1974
PshBI ATTAAT 1 cut(s) 2576
PsiI TTATAA 2 cut(s) 2820, 4013
Psp124BI GAGCTC 1 cut(s) 4463
Psp5II RGGWCCY 2 cut(s) 1814, 3808
Psp6I CCWGG 8 cut(s) 1189, 2562, 2664, 3082, 4714, 4954, 4983, 5643
PspFI CCCAGC 7 cut(s) 560, 851, 1142, 1249, 1838, 2246, 3506
PspGI CCWGG 8 cut(s) 1189, 2562, 2664, 3082, 4714, 4954, 4983, 5643
PspOMI GGGCCC 1 cut(s) 2243
PspPPI RGGWCCY 2 cut(s) 1814, 3808
PsrI GAACNNNNNNTAC 1 cut(s) 5709
PstI CTGCAG 3 cut(s) 4090, 4948, 5112
PsyI GACNNNGTC 1 cut(s) 4262
PvuII CAGCTG 2 cut(s) 4943, 5426
RseI CAYNNNNRTG 5 cut(s) 1134, 1884, 2781, 3552, 4973
SacI GAGCTC 1 cut(s) 4463
SalI GTCGAC 2 cut(s) 4, 3175
SapI GCTCTTC 1 cut(s) 2160
SchI GAGTC 8 cut(s) 477, 768, 1059, 1064, 1870, 3538, 4684, 5536
SduI GDGCHC 6 cut(s) 305, 371, 2247, 2278, 4463, 4878
SfcI CTRYAG 6 cut(s) 267, 1855, 3069, 4086, 4944, 5108
SfiI GGCCNNNNNGGCC 1 cut(s) 4988
SfuI TTCGAA 2 cut(s) 1309, 1809
SinI GGWCC 4 cut(s) 1814, 2716, 3808, 4239
SmiMI CAYNNNNRTG 5 cut(s) 1134, 1884, 2781, 3552, 4973
SmlI CTYRAG 9 cut(s) 408, 699, 990, 1437, 1720, 2061, 3385, 3694, 3998
SmoI CTYRAG 9 cut(s) 408, 699, 990, 1437, 1720, 2061, 3385, 3694, 3998
SnaBI TACGTA 2 cut(s) 653, 944
SpeI ACTAGT 1 cut(s) 3971
SphI GCATGC 1 cut(s) 4138
SseBI AGGCCT 1 cut(s) 77
SsiI CCGC 7 cut(s) 1947, 2724, 3977, 4196, 4577, 4992, 5233
SspI AATATT 2 cut(s) 4891, 4903
SstI GAGCTC 1 cut(s) 4463
StuI AGGCCT 1 cut(s) 77
StyI CCWWGG 4 cut(s) 2845, 3478, 3960, 5381
TatI WGTACW 3 cut(s) 1316, 3208, 3994
TauI GCSGC 1 cut(s) 4994
TseFI GTSAC 1 cut(s) 2772
Tsp45I GTSAC 1 cut(s) 2772
TspGWI ACGGA 3 cut(s) 320, 1977, 3005
Tth111I GACNNNGTC 1 cut(s) 4262
VneI GTGCAC 1 cut(s) 301
VpaK11BI GGWCC 4 cut(s) 1814, 2716, 3808, 4239
VspI ATTAAT 1 cut(s) 2576
XagI CCTNNNNNAGG 1 cut(s) 2744
XapI RAATTY 9 cut(s) 604, 895, 1463, 1805, 2252, 2360, 4351, 4673, 5612
XbaI TCTAGA 4 cut(s) 1517, 2414, 2762, 4654
XceI RCATGY 5 cut(s) 2060, 2285, 3953, 4138, 4229
XmaJI CCTAGG 2 cut(s) 2845, 5381
XmiI GTMKAC 5 cut(s) 5, 2910, 2966, 3176, 5599
XmnI GAANNNNTTC 4 cut(s) 3396, 3399, 4426, 4805
ZraI GACGTC 1 cut(s) 1911
Zsp2I ATGCAT 2 cut(s) 2135, 2604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.