Rmu_sc0003160.1_g000024

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003160.1
OG0000891
Physical Location & Seq
Forward (+)
77570 .. 85436
7867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003160.1_g000024.1.cds

Sequence Viewer

Length: 2370 bp
atggctcgccggactttctcatcggacgacgtcgttttgaagtctccgaatgatagacgactgtaccgattaatcgagctcgagaatggcctcactgctttgctagtccacgatcctgagattggagattcccaactctccaatggctctgaggaagctgagatggaagaagaagaagaagaaggaatggaggaggatgaggatgaggaagacgacgatgaagaagacgaagatagtgaaggagaggatgaagagatggatgaagatgatgagggagaagatgaagatggactgaagaagaaaaagggatgggattctcagactaagaaggcagcagcggcaatgtgtgtaggaataggcagcttctctgaccctcctgaggcaccggggcttgcacactttctagaacacatgctctttatggggagtacagaatttccagatgaaaatgagtatgacagttacttgtccaagcatggagggtgttcaaatgcatacacagaggtagagcatacttgctaccattttgaagtgaaacgagagtttctcaagggtgccttgaccagaggaccagaggttgatgttggagaacacaagcaagcattgtgggatactgggaacatggaatttagatttgcagaggagcagcctcaggatgattatgcctcagaacttgcaggaaatttactaatttatgcagcagaacatgttatttatgggtcctacgcatacaagatttgggatgaggaatcgatcaaatatgttcttgatttccttagaccagaaaacatgaggattgatgttgtatcaaagccctcatttaagtcagaagatttccagtgcgaaccgtggtttgggtcacattatactgaggaagatatatctccatctttgatagatttgtggaaggaccctccagaaattgatgtttcattgcatctcccagaaaagaatgagttcattcctactgatttttccattcgttctgaagatcttgatactacagatacagcttttccgagatgtatactggatgagccattggtgaagttctggtacaaacttgataatacttttaaacttccgcgggcaaatacttatttccgcgtcaatccgaagggtggatatgataatgtgaagagttgtgtcttgactgaactatatgtatccctcctcaaagatgagctgaatgagattgtttatcaggctagtgttgccaagctggaaacttcggtatctgtatcgactgacaagctggagctaaaggtctacggtttcaatgacaagcttccagctctgctgtcaaagattctgaaaacaaccaaaagtttcgtgccaacttctgatcgttttatggttatcaaagaagatatggagcgaaagttaaagaacaccaatatgaagcctctgagtcactctacatacttgagagtgcaagttttgttccagagattctatgatgttgatgagaagttgcatgttttaagtggactgtctatttctgatatgaagtcatttattccccaactttggtcccaggtatacattgaaggcctctgtcatggaaatttgtcagaaaaagaagcaatcagcctttcagatatatttaaaacaaatttttgtgtacaaccacttccaattgaactgaggcgcagtgaacagtgtatttgtcttcctccttctgctaacctcattagagatgtcagtgtgaagaatcagtctgaaaaaaattcagtgattgagctgtattttcaaattgagcgggaattgaggattgagtcccccagattgagagccctgatagatcttttcaatgaaattgtggaggaaccacttttcaatcagctaaggacgaaggagcagcttggttatactgttcattgtggcccacgggttacttgcaatatatttggattttatttttgcgttcagtcagctgagtacaacccaatctacttgcaagggagagttgagtactttataaatagtctggaggagttgttgcaaggactggatgatgactcttttgaggattacagagctgggctaattgcaaagctgttggagaaagatccatccctccattatgaaaccaatcgatattggttacagattaccgataaaatgtatatgtttgactatacaaaacaggaggcagaacgactcaagagcattcagaaggaggatgtcatcaactggtacaaaacatatttgcaacaatcatctcccaagtgtcggagacttgcaattcgtgtttggggatgcaacacagacttgaaagaggctgaagcacggccggagtctgtaaaagtcattgaagaccttgcagcctttaagatgtcatctgagttctatccaagcatttgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

789

Amino Acids

91.29

Weight (kDa)

4.58

Isoelectric Point (pI)

50.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1982
AatII GACGTC 1 cut(s) 33
AccB1I GGYRCC 2 cut(s) 382, 554
AccBSI CCGCTC 1 cut(s) 1762
AccI GTMKAC 3 cut(s) 1027, 1269, 1542
AccII CGCG 2 cut(s) 1087, 1107
AciI CCGC 5 cut(s) 338, 1085, 1087, 1105, 1762
AclWI GGATC 2 cut(s) 107, 2066
AcoI YGGCCR 1 cut(s) 2294
AcsI RAATTY 6 cut(s) 434, 626, 682, 1567, 1615, 1729
AcuI CTGAAG 3 cut(s) 314, 1008, 2307
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 7 cut(s) 65, 430, 1058, 1626, 1943, 1976, 2201
AfiI CCNNNNNNNGG 6 cut(s) 122, 379, 854, 1121, 1530, 2235
AflIII ACRYGT 1 cut(s) 706
AjnI CCWGG 1 cut(s) 1536
AjuI GAANNNNNNNTTGG 2 cut(s) 837, 869
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 2 cut(s) 48, 2233
AlwI GGATC 2 cut(s) 107, 2066
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 4 cut(s) 88, 1552, 1885, 2294
ApeKI GCWGC 7 cut(s) 332, 335, 360, 646, 698, 1861, 2327
ApoI RAATTY 6 cut(s) 434, 626, 682, 1567, 1615, 1729
ArsI GACNNNNNNTTYG 2 cut(s) 2232, 2264
AseI ATTAAT 1 cut(s) 71
Asp700I GAANNNNTTC 1 cut(s) 956
AspLEI GCGC 1 cut(s) 1653
AspS9I GGNCC 5 cut(s) 569, 720, 910, 1533, 1886
AsuC2I CCSGG 1 cut(s) 387
AsuHPI GGTGA 1 cut(s) 1057
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 4 cut(s) 569, 720, 910, 1533
AxyI CCTNAGG 2 cut(s) 378, 651
BaeI ACNNNNGTAYC 4 cut(s) 47, 80, 1218, 1251
BanI GGYRCC 2 cut(s) 382, 554
BanII GRGCYC 2 cut(s) 81, 1798
BarI GAAGNNNNNNTAC 4 cut(s) 1040, 1072, 1617, 1649
BbsI GAAGAC 4 cut(s) 216, 231, 1664, 2325
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 7 cut(s) 344, 347, 372, 658, 710, 1873, 2339
BccI CCATC 6 cut(s) 157, 250, 281, 303, 895, 2083
BceAI ACGGC 1 cut(s) 2309
BciT130I CCWGG 1 cut(s) 1538
BciVI GTATCC 2 cut(s) 604, 1177
BcnI CCSGG 1 cut(s) 387
BcoDI GTCTC 2 cut(s) 48, 2233
BfaI CTAG 3 cut(s) 104, 404, 1209
BfmI CTRYAG 1 cut(s) 1002
BfuI GTATCC 2 cut(s) 604, 1177
BglII AGATCT 2 cut(s) 991, 1804
BisI GCNGC 8 cut(s) 333, 336, 339, 361, 647, 699, 1862, 2328
BlsI GCNGC 8 cut(s) 334, 337, 340, 362, 648, 700, 1863, 2329
BmcAI AGTACT 1 cut(s) 1976
Bme1390I CCNGG 2 cut(s) 387, 1538
Bme18I GGWCC 4 cut(s) 569, 720, 910, 1533
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 5 cut(s) 569, 720, 910, 1533, 1886
BmiI GGNNCC 6 cut(s) 384, 556, 721, 912, 1535, 1830
BmrFI CCNGG 2 cut(s) 387, 1538
BmrI ACTGGG 1 cut(s) 624
BmsI GCATC 2 cut(s) 946, 2252
BmuI ACTGGG 1 cut(s) 624
BpiI GAAGAC 4 cut(s) 216, 231, 1664, 2325
BplI GAGNNNNNCTC 2 cut(s) 531, 563
BpmI CTGGAG 3 cut(s) 900, 1277, 2012
Bpu10I CCTNAGC 1 cut(s) 1847
BpuEI CTTGAG 3 cut(s) 533, 1447, 2150
BpuMI CCSGG 1 cut(s) 387
Bsa29I ATCGAT 2 cut(s) 752, 2098
BsaHI GRCGYC 1 cut(s) 30
BsaJI CCNNGG 5 cut(s) 386, 848, 1085, 1536, 1889
BsaXI ACNNNNNCTCC 4 cut(s) 1367, 1397, 1985, 2015
Bsc4I CCNNNNNNNGG 6 cut(s) 122, 379, 854, 1121, 1530, 2235
Bse1I ACTGG 5 cut(s) 619, 838, 1035, 2016, 2201
Bse21I CCTNAGG 2 cut(s) 378, 651
Bse3DI GCAATG 2 cut(s) 348, 932
BseBI CCWGG 1 cut(s) 1538
BseCI ATCGAT 2 cut(s) 752, 2098
BseDI CCNNGG 5 cut(s) 386, 848, 1085, 1536, 1889
BseLI CCNNNNNNNGG 6 cut(s) 122, 379, 854, 1121, 1530, 2235
BseMI GCAATG 2 cut(s) 348, 932
BseNI ACTGG 5 cut(s) 619, 838, 1035, 2016, 2201
BseRI GAGGAG 4 cut(s) 206, 656, 1163, 2009
BseX3I CGGCCG 1 cut(s) 2294
BseXI GCAGC 7 cut(s) 344, 347, 372, 658, 710, 1873, 2339
BseYI CCCAGC 1 cut(s) 2042
Bsh1236I CGCG 2 cut(s) 1087, 1107
Bsh1285I CGRYCG 1 cut(s) 2297
BshFI GGCC 4 cut(s) 90, 1554, 1887, 2296
BshNI GGYRCC 2 cut(s) 382, 554
BshVI ATCGAT 2 cut(s) 752, 2098
BsiEI CGRYCG 1 cut(s) 2297
BsiHKAI GWGCWC 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 3 cut(s) 10, 386, 2297
BslFI GGGAC 2 cut(s) 1519, 1765
BslI CCNNNNNNNGG 6 cut(s) 122, 379, 854, 1121, 1530, 2235
BsmAI GTCTC 2 cut(s) 48, 2233
BsmFI GGGAC 2 cut(s) 1519, 1765
BsmI GAATGC 1 cut(s) 2172
BsnI GGCC 4 cut(s) 90, 1554, 1887, 2296
BsoBI CYCGRG 1 cut(s) 80
Bsp1286I GDGCHC 2 cut(s) 81, 1798
Bsp1407I TGTACA 1 cut(s) 1624
Bsp143I GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
BspACI CCGC 5 cut(s) 338, 1085, 1087, 1105, 1762
BspANI GGCC 4 cut(s) 90, 1554, 1887, 2296
BspDI ATCGAT 2 cut(s) 752, 2098
BspFNI CGCG 2 cut(s) 1087, 1107
BspLI GGNNCC 6 cut(s) 384, 556, 721, 912, 1535, 1830
BspPI GGATC 2 cut(s) 107, 2066
BspT107I GGYRCC 2 cut(s) 382, 554
BsrBI CCGCTC 1 cut(s) 1762
BsrDI GCAATG 2 cut(s) 348, 932
BsrGI TGTACA 1 cut(s) 1624
BsrI ACTGG 5 cut(s) 619, 838, 1035, 2016, 2201
BssECI CCNNGG 5 cut(s) 386, 848, 1085, 1536, 1889
BssMI GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
BssNAI GTATAC 2 cut(s) 1028, 1543
BssNI GRCGYC 1 cut(s) 30
Bst1107I GTATAC 2 cut(s) 1028, 1543
Bst2UI CCWGG 1 cut(s) 1538
Bst4CI ACNGT 7 cut(s) 63, 461, 849, 1274, 1494, 1662, 1876
Bst6I CTCTTC 2 cut(s) 246, 1133
BstACI GRCGYC 1 cut(s) 30
BstAUI TGTACA 1 cut(s) 1624
BstC8I GCNNGC 4 cut(s) 7, 393, 600, 1089
BstDSI CCRYGG 3 cut(s) 848, 1085, 1889
BstFNI CGCG 2 cut(s) 1087, 1107
BstHHI GCGC 1 cut(s) 1653
BstKTI GATC 6 cut(s) 115, 756, 994, 1348, 1807, 2074
BstMAI GTCTC 2 cut(s) 48, 2233
BstMBI GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
BstMCI CGRYCG 1 cut(s) 2297
BstMWI GCNNNNNNNGC 2 cut(s) 338, 1214
BstNI CCWGG 1 cut(s) 1538
BstNSI RCATGY 3 cut(s) 415, 710, 1481
BstSCI CCNGG 2 cut(s) 385, 1536
BstSFI CTRYAG 1 cut(s) 1002
BstUI CGCG 2 cut(s) 1087, 1107
BstV1I GCAGC 7 cut(s) 344, 347, 372, 658, 710, 1873, 2339
BstV2I GAAGAC 4 cut(s) 216, 231, 1664, 2325
BstX2I RGATCY 3 cut(s) 991, 1804, 2071
BstYI RGATCY 3 cut(s) 991, 1804, 2071
BstZ17I GTATAC 2 cut(s) 1028, 1543
BstZI CGGCCG 1 cut(s) 2294
Bsu15I ATCGAT 2 cut(s) 752, 2098
Bsu36I CCTNAGG 2 cut(s) 378, 651
BsuI GTATCC 2 cut(s) 604, 1177
BsuRI GGCC 4 cut(s) 90, 1554, 1887, 2296
BsuTUI ATCGAT 2 cut(s) 752, 2098
BtgI CCRYGG 3 cut(s) 848, 1085, 1889
BtsI GCAGTG 2 cut(s) 93, 1660
BtsIMutI CAGTG 6 cut(s) 93, 845, 1660, 1667, 1711, 1740
Cac8I GCNNGC 4 cut(s) 7, 393, 600, 1089
CfoI GCGC 1 cut(s) 1653
Cfr13I GGNCC 5 cut(s) 569, 720, 910, 1533, 1886
Cfr42I CCGCGG 1 cut(s) 1088
ClaI ATCGAT 2 cut(s) 752, 2098
CseI GACGC 1 cut(s) 1096
Csp6I GTAC 7 cut(s) 64, 429, 1057, 1625, 1942, 1975, 2200
CspCI CAANNNNNGTGG 2 cut(s) 587, 622
CviAII CATG 7 cut(s) 412, 476, 622, 707, 790, 1478, 1562
CviQI GTAC 7 cut(s) 64, 429, 1057, 1625, 1942, 1975, 2200
DpnI GATC 6 cut(s) 114, 755, 993, 1347, 1806, 2073
DpnII GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
DraI TTTAAA 2 cut(s) 1078, 1609
EaeI YGGCCR 1 cut(s) 2294
EagI CGGCCG 1 cut(s) 2294
Eam1104I CTCTTC 2 cut(s) 246, 1133
EarI CTCTTC 2 cut(s) 246, 1133
Ecl136II GAGCTC 1 cut(s) 79
EclXI CGGCCG 1 cut(s) 2294
Eco147I AGGCCT 1 cut(s) 1554
Eco24I GRGCYC 2 cut(s) 81, 1798
Eco47I GGWCC 4 cut(s) 569, 720, 910, 1533
Eco52I CGGCCG 1 cut(s) 2294
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 3 cut(s) 314, 1008, 2307
Eco81I CCTNAGG 2 cut(s) 378, 651
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 79
EcoO109I RGGNCCY 2 cut(s) 720, 910
EcoRII CCWGG 1 cut(s) 1536
EcoT22I ATGCAT 1 cut(s) 496
EcoT38I GRGCYC 2 cut(s) 81, 1798
FaeI CATG 7 cut(s) 415, 479, 625, 710, 793, 1481, 1565
FalI AAGNNNNNCTT 2 cut(s) 542, 574
FaqI GGGAC 2 cut(s) 1519, 1765
FatI CATG 7 cut(s) 411, 475, 621, 706, 789, 1477, 1561
FauI CCCGC 2 cut(s) 1080, 1755
FblI GTMKAC 3 cut(s) 1027, 1269, 1542
Fnu4HI GCNGC 8 cut(s) 333, 336, 339, 361, 647, 699, 1862, 2328
FriOI GRGCYC 2 cut(s) 81, 1798
Fsp4HI GCNGC 8 cut(s) 333, 336, 339, 361, 647, 699, 1862, 2328
FspBI CTAG 3 cut(s) 104, 404, 1209
GlaI GCGC 1 cut(s) 1652
GluI GCNGC 8 cut(s) 333, 336, 339, 361, 647, 699, 1862, 2328
GsaI CCCAGC 1 cut(s) 2046
GsuI CTGGAG 3 cut(s) 900, 1277, 2012
HaeIII GGCC 4 cut(s) 90, 1554, 1887, 2296
HapII CCGG 3 cut(s) 10, 386, 2297
HgaI GACGC 1 cut(s) 1096
HhaI GCGC 1 cut(s) 1653
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 7 cut(s) 415, 479, 625, 710, 793, 1481, 1565
Hin6I GCGC 1 cut(s) 1651
HinP1I GCGC 1 cut(s) 1651
HindIII AAGCTT 1 cut(s) 1286
HpaII CCGG 3 cut(s) 10, 386, 2297
HphI GGTGA 1 cut(s) 1057
Hpy166II GTNNAC 7 cut(s) 109, 1028, 1270, 1490, 1543, 1625, 1658
Hpy8I GTNNAC 7 cut(s) 109, 1028, 1270, 1490, 1543, 1625, 1658
Hpy99I CGWCG 3 cut(s) 32, 35, 218
HpyAV CCTTC 9 cut(s) 176, 233, 322, 901, 1111, 1544, 1689, 1849, 2173
HpyCH4III ACNGT 7 cut(s) 63, 461, 849, 1274, 1494, 1662, 1876
HpyCH4IV ACGT 1 cut(s) 30
HpyF10VI GCNNNNNNNGC 2 cut(s) 338, 1214
HpySE526I ACGT 1 cut(s) 30
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 7 cut(s) 415, 479, 625, 710, 793, 1481, 1565
HspAI GCGC 1 cut(s) 1651
KspI CCGCGG 1 cut(s) 1088
Kzo9I GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
LmnI GCTCC 4 cut(s) 643, 1258, 1375, 1858
Lsp1109I GCAGC 7 cut(s) 344, 347, 372, 658, 710, 1873, 2339
LweI GCATC 2 cut(s) 946, 2252
MaeI CTAG 3 cut(s) 104, 404, 1209
MaeII ACGT 1 cut(s) 30
MaeIII GTNAC 5 cut(s) 461, 858, 1412, 1894, 2106
MalI GATC 6 cut(s) 114, 755, 993, 1347, 1806, 2073
MbiI CCGCTC 1 cut(s) 1762
MboI GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
MfeI CAATTG 1 cut(s) 1638
MflI RGATCY 3 cut(s) 991, 1804, 2071
MhlI GDGCHC 2 cut(s) 81, 1798
MlyI GAGTC 5 cut(s) 1420, 1787, 2015, 2157, 2309
MmeI TCCRAC 3 cut(s) 565, 2043, 2216
Mph1103I ATGCAT 1 cut(s) 496
MroXI GAANNNNTTC 1 cut(s) 956
MseI TTAA 7 cut(s) 71, 822, 1077, 1385, 1484, 1608, 2334
MslI CAYNNNNRTG 1 cut(s) 1397
MspA1I CMGCKG 3 cut(s) 338, 1087, 1937
MspI CCGG 3 cut(s) 10, 386, 2297
MspR9I CCNGG 2 cut(s) 387, 1538
MunI CAATTG 1 cut(s) 1638
Mva1269I GAATGC 1 cut(s) 2172
MvaI CCWGG 1 cut(s) 1538
MvnI CGCG 2 cut(s) 1087, 1107
MwoI GCNNNNNNNGC 2 cut(s) 338, 1214
NciI CCSGG 1 cut(s) 387
NdeII GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
NlaIII CATG 7 cut(s) 415, 479, 625, 710, 793, 1481, 1565
NlaIV GGNNCC 6 cut(s) 384, 556, 721, 912, 1535, 1830
NmuCI GTSAC 2 cut(s) 858, 1412
NsiI ATGCAT 1 cut(s) 496
NspI RCATGY 3 cut(s) 415, 710, 1481
PaeR7I CTCGAG 1 cut(s) 80
PceI AGGCCT 1 cut(s) 1554
PciI ACATGT 1 cut(s) 706
PcsI WCGNNNNNNNCGW 1 cut(s) 64
PctI GAATGC 1 cut(s) 2172
PdmI GAANNNNTTC 1 cut(s) 956
PfeI GAWTC 6 cut(s) 128, 314, 749, 1309, 1452, 1714
PflFI GACNNNGTC 1 cut(s) 29
PkrI GCNGC 8 cut(s) 334, 337, 340, 362, 648, 700, 1863, 2329
PleI GAGTC 5 cut(s) 1419, 1786, 2015, 2157, 2308
PpsI GAGTC 5 cut(s) 1419, 1786, 2015, 2157, 2308
PpuMI RGGWCCY 2 cut(s) 720, 910
PscI ACATGT 1 cut(s) 706
PshBI ATTAAT 1 cut(s) 71
PsiI TTATAA 1 cut(s) 1982
Psp124BI GAGCTC 1 cut(s) 81
Psp5II RGGWCCY 2 cut(s) 720, 910
Psp6I CCWGG 1 cut(s) 1536
PspFI CCCAGC 1 cut(s) 2042
PspGI CCWGG 1 cut(s) 1536
PspN4I GGNNCC 6 cut(s) 384, 556, 721, 912, 1535, 1830
PspPI GGNCC 5 cut(s) 569, 720, 910, 1533, 1886
PspPPI RGGWCCY 2 cut(s) 720, 910
PsuI RGATCY 3 cut(s) 991, 1804, 2071
PsyI GACNNNGTC 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 1937
RsaI GTAC 7 cut(s) 65, 430, 1058, 1626, 1943, 1976, 2201
RsaNI GTAC 7 cut(s) 64, 429, 1057, 1625, 1942, 1975, 2200
RseI CAYNNNNRTG 1 cut(s) 1397
SacI GAGCTC 1 cut(s) 81
SacII CCGCGG 1 cut(s) 1088
SaqAI TTAA 7 cut(s) 71, 822, 1077, 1385, 1484, 1608, 2334
SatI GCNGC 8 cut(s) 333, 336, 339, 361, 647, 699, 1862, 2328
Sau3AI GATC 6 cut(s) 112, 753, 991, 1345, 1804, 2071
Sau96I GGNCC 5 cut(s) 569, 720, 910, 1533, 1886
ScaI AGTACT 1 cut(s) 1976
SchI GAGTC 5 cut(s) 1420, 1787, 2015, 2157, 2309
ScrFI CCNGG 2 cut(s) 387, 1538
SduI GDGCHC 2 cut(s) 81, 1798
SfaNI GCATC 2 cut(s) 946, 2252
SfcI CTRYAG 1 cut(s) 1002
Sfr274I CTCGAG 1 cut(s) 80
Sfr303I CCGCGG 1 cut(s) 1088
SgrBI CCGCGG 1 cut(s) 1088
SinI GGWCC 4 cut(s) 569, 720, 910, 1533
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 1 cut(s) 1397
SmlI CTYRAG 4 cut(s) 80, 548, 1426, 2165
SmoI CTYRAG 4 cut(s) 80, 548, 1426, 2165
SseBI AGGCCT 1 cut(s) 1554
SsiI CCGC 5 cut(s) 338, 1085, 1087, 1105, 1762
SspMI CTAG 3 cut(s) 104, 404, 1209
SstI GAGCTC 1 cut(s) 81
StuI AGGCCT 1 cut(s) 1554
StyD4I CCNGG 2 cut(s) 385, 1536
TaaI ACNGT 7 cut(s) 63, 461, 849, 1274, 1494, 1662, 1876
TaiI ACGT 1 cut(s) 33
TaqI TCGA 5 cut(s) 75, 81, 752, 1244, 2098
TatI WGTACW 4 cut(s) 428, 1624, 1941, 1974
TauI GCSGC 1 cut(s) 341
TfiI GAWTC 6 cut(s) 128, 314, 749, 1309, 1452, 1714
Tru1I TTAA 7 cut(s) 71, 822, 1077, 1385, 1484, 1608, 2334
Tru9I TTAA 7 cut(s) 71, 822, 1077, 1385, 1484, 1608, 2334
TscAI CASTG 6 cut(s) 100, 845, 1660, 1667, 1711, 1740
TseFI GTSAC 2 cut(s) 858, 1412
TseI GCWGC 7 cut(s) 332, 335, 360, 646, 698, 1861, 2327
Tsp45I GTSAC 2 cut(s) 858, 1412
TspRI CASTG 6 cut(s) 100, 845, 1660, 1667, 1711, 1740
Tth111I GACNNNGTC 1 cut(s) 29
VpaK11BI GGWCC 4 cut(s) 569, 720, 910, 1533
VspI ATTAAT 1 cut(s) 71
XapI RAATTY 6 cut(s) 434, 626, 682, 1567, 1615, 1729
XbaI TCTAGA 1 cut(s) 403
XceI RCATGY 3 cut(s) 415, 710, 1481
XcmI CCANNNNNNNNNTGG 1 cut(s) 140
XhoI CTCGAG 1 cut(s) 80
XmiI GTMKAC 3 cut(s) 1027, 1269, 1542
XmnI GAANNNNTTC 1 cut(s) 956
XspI CTAG 3 cut(s) 104, 404, 1209
ZraI GACGTC 1 cut(s) 31
ZrmI AGTACT 1 cut(s) 1976
Zsp2I ATGCAT 1 cut(s) 496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.