Rh5AG470900

Cation H( ) antiporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
80734845 .. 80736717
1873 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG470900.1

Sequence Viewer

Length: 444 bp
ATGATTCTAACAAATAAAACCGAAACAAGAACTCTATGGGCTGACATCTTCCCTTCTGATGCTGGAGATGCAGATGGCTATGATTTTCATCACAACCTAAGTCCTCCATTTACTTTTGAAGAGACAGGCATAGTACTCTTCGGCGTGCTTTACCACTATTGGGGATTTGGTGAAACAGCATTTAATGTGAAAAGTCAAGGAGTTATTACTCTTTTGGGTGAGCTTGGGTACGCCCTCTTCCTGTCTGTACTCGGAACGACAATGGATTTGGGAATGATAAGAAGATCAGGATGTAAAACCATGCTCACCGGGGTTTTATGCATGTTGATCCCTTTGGCAAGTGGTGCGGTTGTAAATAACAACTTGCTAAAGAATCTGAATCTGATGAATTACTTCATCTTGGATCAGAGCATATATTCTTATAATGGACTTTCTATTTCTTGA

Protein Analysis

147

Amino Acids

16.22

Weight (kDa)

4.9

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AciI CCGC 1 cut(s) 347
AclWI GGATC 2 cut(s) 322, 411
AfaI GTAC 3 cut(s) 135, 230, 249
AfiI CCNNNNNNNGG 1 cut(s) 160
AgsI TTSAA 1 cut(s) 119
AluBI AGCT 1 cut(s) 223
AluI AGCT 1 cut(s) 223
Alw26I GTCTC 1 cut(s) 116
AlwI GGATC 2 cut(s) 322, 411
ArsI GACNNNNNNTTYG 2 cut(s) 250, 282
Asp700I GAANNNNTTC 1 cut(s) 392
AsuC2I CCSGG 1 cut(s) 310
AsuHPI GGTGA 3 cut(s) 182, 230, 298
BarI GAAGNNNNNNTAC 2 cut(s) 221, 253
BccI CCATC 1 cut(s) 68
BcnI CCSGG 1 cut(s) 310
BcoDI GTCTC 1 cut(s) 116
BmcAI AGTACT 1 cut(s) 135
Bme1390I CCNGG 1 cut(s) 310
BmrFI CCNGG 1 cut(s) 310
BmsI GCATC 2 cut(s) 49, 58
BpmI CTGGAG 1 cut(s) 84
BpuMI CCSGG 1 cut(s) 310
BsaBI GATNNNNATC 1 cut(s) 87
BsaJI CCNNGG 1 cut(s) 309
Bsc4I CCNNNNNNNGG 1 cut(s) 160
Bse8I GATNNNNATC 1 cut(s) 87
BseDI CCNNGG 1 cut(s) 309
BseGI GGATG 1 cut(s) 296
BseJI GATNNNNATC 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 160
BsiSI CCGG 1 cut(s) 309
BslI CCNNNNNNNGG 1 cut(s) 160
BsmAI GTCTC 1 cut(s) 116
Bsp143I GATC 3 cut(s) 284, 327, 403
BspACI CCGC 1 cut(s) 347
BspPI GGATC 2 cut(s) 322, 411
BssECI CCNNGG 1 cut(s) 309
BssMI GATC 3 cut(s) 284, 327, 403
Bst6I CTCTTC 3 cut(s) 114, 143, 242
BstAPI GCANNNNNTGC 1 cut(s) 344
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 1 cut(s) 98
BstF5I GGATG 1 cut(s) 296
BstKTI GATC 3 cut(s) 287, 330, 406
BstMAI GTCTC 1 cut(s) 116
BstMBI GATC 3 cut(s) 284, 327, 403
BstMWI GCNNNNNNNGC 2 cut(s) 68, 344
BstNSI RCATGY 1 cut(s) 325
BstSCI CCNGG 1 cut(s) 308
BtsCI GGATG 1 cut(s) 296
Cac8I GCNNGC 1 cut(s) 146
Csp6I GTAC 3 cut(s) 134, 229, 248
CviAII CATG 2 cut(s) 301, 322
CviJI RGCY 3 cut(s) 41, 78, 223
CviKI_1 RGCY 3 cut(s) 41, 78, 223
CviQI GTAC 3 cut(s) 134, 229, 248
DdeI CTNAG 1 cut(s) 98
DpnI GATC 3 cut(s) 286, 329, 405
DpnII GATC 3 cut(s) 284, 327, 403
Eam1104I CTCTTC 3 cut(s) 114, 143, 242
EarI CTCTTC 3 cut(s) 114, 143, 242
EcoT22I ATGCAT 1 cut(s) 323
FaeI CATG 2 cut(s) 304, 325
FaiI YATR 9 cut(s) 37, 81, 131, 302, 319, 323, 413, 415, 423
FatI CATG 2 cut(s) 300, 321
FokI GGATG 1 cut(s) 303
GsuI CTGGAG 1 cut(s) 84
HapII CCGG 1 cut(s) 309
Hin1II CATG 2 cut(s) 304, 325
HinfI GANTC 3 cut(s) 4, 373, 379
HpaII CCGG 1 cut(s) 309
HphI GGTGA 3 cut(s) 182, 230, 298
Hpy188I TCNGA 5 cut(s) 58, 254, 378, 384, 408
Hpy188III TCNNGA 2 cut(s) 288, 441
HpyAV CCTTC 1 cut(s) 63
HpyCH4V TGCA 2 cut(s) 71, 321
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 344
HpyF3I CTNAG 1 cut(s) 98
Hsp92II CATG 2 cut(s) 304, 325
Kzo9I GATC 3 cut(s) 284, 327, 403
LpnPI CCDG 5 cut(s) 48, 111, 254, 273, 322
LweI GCATC 2 cut(s) 49, 58
MalI GATC 3 cut(s) 286, 329, 405
MboI GATC 3 cut(s) 284, 327, 403
MboII GAAGA 5 cut(s) 40, 130, 131, 229, 294
MluCI AATT 1 cut(s) 388
MnlI CCTC 2 cut(s) 114, 245
Mph1103I ATGCAT 1 cut(s) 323
MroXI GAANNNNTTC 1 cut(s) 392
MseI TTAA 1 cut(s) 183
MspI CCGG 1 cut(s) 309
MspR9I CCNGG 1 cut(s) 310
MwoI GCNNNNNNNGC 2 cut(s) 68, 344
NciI CCSGG 1 cut(s) 310
NdeII GATC 3 cut(s) 284, 327, 403
NlaIII CATG 2 cut(s) 304, 325
NsiI ATGCAT 1 cut(s) 323
NspI RCATGY 1 cut(s) 325
PdmI GAANNNNTTC 1 cut(s) 392
PfeI GAWTC 3 cut(s) 4, 373, 379
PsiI TTATAA 1 cut(s) 423
RsaI GTAC 3 cut(s) 135, 230, 249
RsaNI GTAC 3 cut(s) 134, 229, 248
SaqAI TTAA 1 cut(s) 183
Sau3AI GATC 3 cut(s) 284, 327, 403
ScaI AGTACT 1 cut(s) 135
ScrFI CCNGG 1 cut(s) 310
SetI ASST 2 cut(s) 99, 225
SfaNI GCATC 2 cut(s) 49, 58
Sse9I AATT 1 cut(s) 388
SsiI CCGC 1 cut(s) 347
StyD4I CCNGG 1 cut(s) 308
TasI AATT 1 cut(s) 388
TatI WGTACW 2 cut(s) 133, 247
TfiI GAWTC 3 cut(s) 4, 373, 379
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TspDTI ATGAA 3 cut(s) 77, 385, 401
XceI RCATGY 1 cut(s) 325
XmnI GAANNNNTTC 1 cut(s) 392
ZrmI AGTACT 1 cut(s) 135
Zsp2I ATGCAT 1 cut(s) 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.