RLG00000030390

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
60732497 .. 60737407
4911 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030390

Sequence Viewer

Length: 873 bp
ATGACTCTTGGAGTTTACTTATCCAAGCACGGAGGGTGTTCAAATGCACACACGGAAGTAGAGCATACTTGCTACCATTTTGAAGTGAAACGAGAGTTTCTCAAGGGTGCCTTGACGAGATTTTCTCAGTTCTTTGTACTTTCACCCCTTGTAAAAAATGAAGCCATGGAGCGGGAGGCAGAAGGTCCAATTTGGAAAGCTGGAAAACTTTACAGGCTAGAGGCTGTTAAAGATGTTCACATATTCCACTTAAGATGGACATTGCCATGCCTTTGTCAAGACTCTTTGAAGAAATCAGAAGATTATTTATCTCATCTCCTTGGGCATGAGGGCAGGGGAAGTTTGCATTCCTATTTTACAGTTAAAGGGTGGGCAACATCTCTGGCTGCTGGTGTTGGGGATGACGGGATGCATCATTCTTCTGTGGCTTATGTCTTTCGCATGGACATTCATCTCACTGACTTTGGATTGGATAAGATTTTTGATATAATTGGCTTGGTCTACCAATACATAAAGTTATTGCATCAAGTGTCCCCACAAGAATGGATGTTTAAGGAACTGCAGGATACTGGGAACATGGAATTTAGATTTGCAGAGGAGCAATTTCCAGTGCGAACCTTGGTTTGGGTCACACATACTGAGGAATATATATCTCTATCTTTGATAGATTTATGGAAGGACCCTCCAGAAATTGATGTTTCATTGCATCTCCCAGAAAAGAATGAGTACATTCCTACTGATTTTTCTACTCGTTCTGATGGTCTTGATACTACACCTAGTTTTGCCAAGCTGGAAACTTCGGTATATGTATCGACTGACAAGCTGGAGCTAAAGGTCTACGGTTTCGATGACAAGCTTCCAGCTCTGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

291

Amino Acids

33.33

Weight (kDa)

5.57

Isoelectric Point (pI)

28.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 6 - 59 5.4e-08 Insulinase (Peptidase family M16)
Peptidase_M16_M PF16187 213 - 252 1.1e-06 Middle or third domain of peptidase_M16
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 107
AccBSI CCGCTC 1 cut(s) 172
AccI GTMKAC 2 cut(s) 501, 837
AciI CCGC 1 cut(s) 172
AcsI RAATTY 1 cut(s) 581
AfaI GTAC 2 cut(s) 138, 728
AfiI CCNNNNNNNGG 2 cut(s) 171, 624
AflII CTTAAG 1 cut(s) 250
AgsI TTSAA 3 cut(s) 42, 83, 289
AjuI GAANNNNNNNTTGG 2 cut(s) 607, 639
AluBI AGCT 6 cut(s) 200, 790, 823, 829, 856, 863
AluI AGCT 6 cut(s) 200, 790, 823, 829, 856, 863
ApeKI GCWGC 1 cut(s) 386
ApoI RAATTY 1 cut(s) 581
AspS9I GGNCC 2 cut(s) 185, 679
AsuHPI GGTGA 1 cut(s) 135
AvaII GGWCC 2 cut(s) 185, 679
BanI GGYRCC 1 cut(s) 107
BbvI GCAGC 1 cut(s) 373
BccI CCATC 2 cut(s) 249, 752
BciVI GTATCC 1 cut(s) 559
BfaI CTAG 2 cut(s) 218, 777
BfmI CTRYAG 1 cut(s) 560
BfrI CTTAAG 1 cut(s) 250
BfuI GTATCC 1 cut(s) 559
BisI GCNGC 1 cut(s) 387
BlsI GCNGC 1 cut(s) 388
Bme18I GGWCC 2 cut(s) 185, 679
BmgT120I GGNCC 2 cut(s) 185, 679
BmiI GGNNCC 2 cut(s) 109, 681
BmrI ACTGGG 1 cut(s) 579
BmsI GCATC 4 cut(s) 399, 421, 532, 715
BmuI ACTGGG 1 cut(s) 579
BplI GAGNNNNNCTC 4 cut(s) 84, 116, 109, 141
BpmI CTGGAG 2 cut(s) 669, 845
BpuEI CTTGAG 1 cut(s) 86
BsaJI CCNNGG 3 cut(s) 165, 319, 618
Bsc4I CCNNNNNNNGG 2 cut(s) 171, 624
Bse1I ACTGG 2 cut(s) 574, 608
Bse3DI GCAATG 2 cut(s) 260, 701
BseDI CCNNGG 3 cut(s) 165, 319, 618
BseGI GGATG 3 cut(s) 406, 414, 552
BseLI CCNNNNNNNGG 2 cut(s) 171, 624
BseMI GCAATG 2 cut(s) 260, 701
BseMII CTCAG 2 cut(s) 140, 630
BseNI ACTGG 2 cut(s) 574, 608
BseRI GAGGAG 1 cut(s) 611
BseXI GCAGC 1 cut(s) 373
BshNI GGYRCC 1 cut(s) 107
BslFI GGGAC 1 cut(s) 517
BslI CCNNNNNNNGG 2 cut(s) 171, 624
BsmFI GGGAC 1 cut(s) 517
BsmI GAATGC 1 cut(s) 346
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 1 cut(s) 172
BspCNI CTCAG 2 cut(s) 139, 631
BspLI GGNNCC 2 cut(s) 109, 681
BspMAI CTGCAG 1 cut(s) 564
BspT107I GGYRCC 1 cut(s) 107
BspTI CTTAAG 1 cut(s) 250
BsrBI CCGCTC 1 cut(s) 172
BsrDI GCAATG 2 cut(s) 260, 701
BsrI ACTGG 2 cut(s) 574, 608
BssECI CCNNGG 3 cut(s) 165, 319, 618
BssT1I CCWWGG 3 cut(s) 165, 319, 618
Bst4CI ACNGT 2 cut(s) 361, 842
BstAFI CTTAAG 1 cut(s) 250
BstDEI CTNAG 2 cut(s) 126, 639
BstDSI CCRYGG 1 cut(s) 165
BstF5I GGATG 3 cut(s) 406, 414, 552
BstSFI CTRYAG 1 cut(s) 560
BstV1I GCAGC 1 cut(s) 373
BstXI CCANNNNNNTGG 1 cut(s) 543
BsuI GTATCC 1 cut(s) 559
BtgI CCRYGG 1 cut(s) 165
BtsCI GGATG 3 cut(s) 406, 414, 552
BtsIMutI CAGTG 2 cut(s) 456, 615
Cfr13I GGNCC 2 cut(s) 185, 679
Csp6I GTAC 2 cut(s) 137, 727
CviAII CATG 5 cut(s) 166, 267, 326, 442, 577
CviQI GTAC 2 cut(s) 137, 727
DdeI CTNAG 2 cut(s) 126, 639
Eco130I CCWWGG 3 cut(s) 165, 319, 618
Eco47I GGWCC 2 cut(s) 185, 679
EcoO109I RGGNCCY 1 cut(s) 679
EcoT14I CCWWGG 3 cut(s) 165, 319, 618
EcoT22I ATGCAT 1 cut(s) 414
ErhI CCWWGG 3 cut(s) 165, 319, 618
FaeI CATG 5 cut(s) 169, 270, 329, 445, 580
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FaqI GGGAC 1 cut(s) 517
FatI CATG 5 cut(s) 165, 266, 325, 441, 576
FauI CCCGC 1 cut(s) 165
FblI GTMKAC 2 cut(s) 501, 837
Fnu4HI GCNGC 1 cut(s) 387
FokI GGATG 3 cut(s) 413, 421, 559
Fsp4HI GCNGC 1 cut(s) 387
FspBI CTAG 2 cut(s) 218, 777
GluI GCNGC 1 cut(s) 387
GsuI CTGGAG 2 cut(s) 669, 845
Hin1II CATG 5 cut(s) 169, 270, 329, 445, 580
HindIII AAGCTT 1 cut(s) 854
HinfI GANTC 2 cut(s) 4, 281
HphI GGTGA 1 cut(s) 135
Hpy166II GTNNAC 4 cut(s) 16, 238, 502, 838
Hpy188I TCNGA 2 cut(s) 298, 757
Hpy188III TCNNGA 3 cut(s) 278, 686, 764
Hpy8I GTNNAC 4 cut(s) 16, 238, 502, 838
HpyAV CCTTC 2 cut(s) 176, 670
HpyCH4III ACNGT 2 cut(s) 361, 842
HpyCH4V TGCA 7 cut(s) 47, 346, 412, 523, 562, 593, 706
HpyF3I CTNAG 2 cut(s) 126, 639
Hsp92II CATG 5 cut(s) 169, 270, 329, 445, 580
LmnI GCTCC 3 cut(s) 169, 598, 826
Lsp1109I GCAGC 1 cut(s) 373
LweI GCATC 4 cut(s) 399, 421, 532, 715
MaeI CTAG 2 cut(s) 218, 777
MaeIII GTNAC 1 cut(s) 628
MbiI CCGCTC 1 cut(s) 172
MboII GAAGA 3 cut(s) 301, 311, 411
MluCI AATT 5 cut(s) 189, 489, 581, 602, 690
MlyI GAGTC 1 cut(s) 275
MnlI CCTC 7 cut(s) 26, 169, 214, 322, 589, 634, 693
Mph1103I ATGCAT 1 cut(s) 414
MseI TTAA 4 cut(s) 228, 251, 363, 552
MslI CAYNNNNRTG 2 cut(s) 265, 541
MspCI CTTAAG 1 cut(s) 250
Mva1269I GAATGC 1 cut(s) 346
NcoI CCATGG 1 cut(s) 165
NlaIII CATG 5 cut(s) 169, 270, 329, 445, 580
NlaIV GGNNCC 2 cut(s) 109, 681
NmuCI GTSAC 1 cut(s) 628
NsiI ATGCAT 1 cut(s) 414
PctI GAATGC 1 cut(s) 346
PkrI GCNGC 1 cut(s) 388
PleI GAGTC 1 cut(s) 275
PpsI GAGTC 1 cut(s) 275
PpuMI RGGWCCY 1 cut(s) 679
Psp5II RGGWCCY 1 cut(s) 679
PspN4I GGNNCC 2 cut(s) 109, 681
PspPI GGNCC 2 cut(s) 185, 679
PspPPI RGGWCCY 1 cut(s) 679
PstI CTGCAG 1 cut(s) 564
RsaI GTAC 2 cut(s) 138, 728
RsaNI GTAC 2 cut(s) 137, 727
RseI CAYNNNNRTG 2 cut(s) 265, 541
SaqAI TTAA 4 cut(s) 228, 251, 363, 552
SatI GCNGC 1 cut(s) 387
Sau96I GGNCC 2 cut(s) 185, 679
SchI GAGTC 1 cut(s) 275
SfaNI GCATC 4 cut(s) 399, 421, 532, 715
SfcI CTRYAG 1 cut(s) 560
SinI GGWCC 2 cut(s) 185, 679
SmiMI CAYNNNNRTG 2 cut(s) 265, 541
SmlI CTYRAG 2 cut(s) 101, 250
SmoI CTYRAG 2 cut(s) 101, 250
Sse9I AATT 5 cut(s) 189, 489, 581, 602, 690
SsiI CCGC 1 cut(s) 172
SspMI CTAG 2 cut(s) 218, 777
StyI CCWWGG 3 cut(s) 165, 319, 618
TaaI ACNGT 2 cut(s) 361, 842
TaqI TCGA 2 cut(s) 812, 846
TasI AATT 5 cut(s) 189, 489, 581, 602, 690
TatI WGTACW 2 cut(s) 136, 726
Tru1I TTAA 4 cut(s) 228, 251, 363, 552
Tru9I TTAA 4 cut(s) 228, 251, 363, 552
TscAI CASTG 2 cut(s) 463, 615
TseFI GTSAC 1 cut(s) 628
TseI GCWGC 1 cut(s) 386
Tsp45I GTSAC 1 cut(s) 628
TspDTI ATGAA 3 cut(s) 174, 440, 690
TspGWI ACGGA 2 cut(s) 45, 68
TspRI CASTG 2 cut(s) 463, 615
Vha464I CTTAAG 1 cut(s) 250
VpaK11BI GGWCC 2 cut(s) 185, 679
XapI RAATTY 1 cut(s) 581
XmiI GTMKAC 2 cut(s) 501, 837
XspI CTAG 2 cut(s) 218, 777
Zsp2I ATGCAT 1 cut(s) 414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.