Rmu_sc0002635.1_g000001

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002635.1
Physical Location & Seq
Reverse (-)
568 .. 4467
3900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002635.1_g000001.1.cds

Sequence Viewer

Length: 1782 bp
atgagttctaaggccattgccttcattttacttaaatttgctgtgcctcttcagttcttgcatgctctacttgcttatcttggtgattctgttagttatgaaagtgcatcatcaggtctcaagtcacctttggctaaatgccctgcttcattctatcctggaatcgatactccatctgaaggtcttgtaagatggcagttgcgactagagtattttgcttatgaaacattgcaagatttgagaatagcaaaattatttgagattattgtggattatcctgacagctctcctgcgattgaagatttgaaacagtgtcttgaatacactggacaacattctaagcttgtggagtcatttatttcagcactacagtaccggttgctcactgcaggtgcctcaacaaatgacattttgcatcaatatgtttcaacgattaaggcacttcggacaatagatccagcaggtgttttccttgaagcagtcggtgagccaataagggactatttaaggggaaggaaagacaccataaagtgcattgtgaccatgcttaccgatgggactggtgcaaattctaatgtatccggaaacactggcgatagccttcttgaagaattaaatagagatgaagaaagccaagagaacattgctcctgaggatgactttcatactgatgataagcaagcttggataaatgcttcacgctgggagcctgaccctgtagaagctgaccccttgaaaggtagcaggaaccgaaggaaggttgacatacttggaatgattgttggcataattggttcacaagaccaacttgttaatgaataccgtgttatgctggccgaaaagcttctcaacaaatctgattatgacattgattcagagatacgtactcttgaactcctcaagatacattttggagagaacagcatgcagaaatgtgaaattatgctcaatgatctgattggttctaagaggaccaacactaatattaaagcaaccatagctcagccatctcatacagatgcaggcggtgagctgggggataacagggtatccatggatattcttgatgctacaattatctcttcaaatttttggccttcaatccaggaggagtccctaaatgtaccttggcctgttgaccaactactctctgattatgcaaagagatttaatgaaatcaagacccctcgtaagctattgtggaagaagaatcttggaactgtcaagttggaattgcaatttgaagatagagaaatgcagttcatggttgctcctcttcatgcagcaatcgtaatgcaatttcaagatcagaaaagctggacctccaaagatcttgcagctgtagttggggttccaatagatatacttaatcggaggatcaatttttggataagcaagggaattcttgcagaatcacttggggaagacactgatgatcatgtgtttacgctaatggaagggatgattgacactggcaaaagcactgctaatgatgggaactgcgaggatcttatagttggtgatgaggaaggagagagctctgtagcctctgtagaggatcaactgcgcaaggaaatgactgtgtatgagaaatttattttggggatgctcacaaactttggaagcatggctttggatcgtattcataatactctcaagatgttctgcatagctgatcctacttatgacaaaaccctccaacagctgcaaagtttcttatcaggtctagtttctgaagagaaattagaactaagagatggcatgtactttttgaagaagtaa

Protein Analysis

593

Amino Acids

66.59

Weight (kDa)

4.78

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 380, 452
Acc16I TGCGCA 1 cut(s) 1568
Acc36I ACCTGC 2 cut(s) 380, 452
AccB1I GGYRCC 1 cut(s) 392
AccIII TCCGGA 1 cut(s) 581
AciI CCGC 1 cut(s) 1026
AclWI GGATC 6 cut(s) 449, 1385, 1515, 1566, 1644, 1670
AcoI YGGCCR 1 cut(s) 834
AcsI RAATTY 5 cut(s) 35, 568, 1087, 1401, 1592
AcuI CTGAAG 3 cut(s) 35, 198, 1755
AfaI GTAC 4 cut(s) 374, 886, 1125, 1766
AfiI CCNNNNNNNGG 3 cut(s) 179, 737, 757
AgeI ACCGGT 1 cut(s) 375
AjnI CCWGG 2 cut(s) 157, 1104
AjuI GAANNNNNNNTTGG 2 cut(s) 1583, 1615
Alw21I GWGCWC 1 cut(s) 1541
Alw26I GTCTC 1 cut(s) 122
AlwI GGATC 6 cut(s) 449, 1385, 1515, 1566, 1644, 1670
Aor13HI TCCGGA 1 cut(s) 581
AoxI GGCC 4 cut(s) 12, 834, 1094, 1130
ApeKI GCWGC 3 cut(s) 1283, 1337, 1705
ApoI RAATTY 5 cut(s) 35, 568, 1087, 1401, 1592
AsiGI ACCGGT 1 cut(s) 375
Asp700I GAANNNNTTC 1 cut(s) 843
AspLEI GCGC 1 cut(s) 1569
AspS9I GGNCC 2 cut(s) 972, 1320
AsuHPI GGTGA 5 cut(s) 95, 117, 497, 1040, 1532
AvaII GGWCC 2 cut(s) 972, 1320
AxyI CCTNAGG 1 cut(s) 651
BaeI ACNNNNGTAYC 2 cut(s) 356, 389
BanI GGYRCC 1 cut(s) 392
BanII GRGCYC 1 cut(s) 1541
BbsI GAAGAC 1 cut(s) 1431
Bbv12I GWGCWC 1 cut(s) 1541
BbvI GCAGC 3 cut(s) 1295, 1349, 1692
BccI CCATC 6 cut(s) 181, 186, 548, 1015, 1487, 1751
BciT130I CCWGG 2 cut(s) 159, 1106
BciVI GTATCC 2 cut(s) 589, 1060
BclI TGATCA 1 cut(s) 1435
BcoDI GTCTC 1 cut(s) 122
BfaI CTAG 2 cut(s) 206, 1727
BfmI CTRYAG 6 cut(s) 368, 387, 717, 1341, 1542, 1551
BfuAI ACCTGC 2 cut(s) 380, 452
BfuI GTATCC 2 cut(s) 589, 1060
BglII AGATCT 1 cut(s) 1330
BisI GCNGC 3 cut(s) 1284, 1338, 1706
BlpI GCTNAGC 1 cut(s) 1002
BlsI GCNGC 3 cut(s) 1285, 1339, 1707
Bme1390I CCNGG 2 cut(s) 159, 1106
Bme18I GGWCC 2 cut(s) 972, 1320
BmgT120I GGNCC 2 cut(s) 972, 1320
BmiI GGNNCC 4 cut(s) 394, 708, 749, 1353
BmrFI CCNGG 2 cut(s) 159, 1106
BmsI GCATC 5 cut(s) 116, 424, 1009, 1057, 1596
BpiI GAAGAC 1 cut(s) 1431
Bpu1102I GCTNAGC 1 cut(s) 1002
BpuEI CTTGAG 3 cut(s) 104, 884, 1640
Bsa29I ATCGAT 1 cut(s) 165
BsaAI YACGTR 1 cut(s) 884
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 2 cut(s) 1053, 1127
BsaWI WCCGGW 2 cut(s) 375, 581
Bsc4I CCNNNNNNNGG 3 cut(s) 179, 737, 757
Bse118I RCCGGY 1 cut(s) 375
Bse1I ACTGG 4 cut(s) 331, 565, 595, 1477
Bse21I CCTNAGG 1 cut(s) 651
Bse3DI GCAATG 3 cut(s) 15, 227, 642
BseAI TCCGGA 1 cut(s) 581
BseBI CCWGG 2 cut(s) 159, 1106
BseCI ATCGAT 1 cut(s) 165
BseDI CCNNGG 2 cut(s) 1053, 1127
BseGI GGATG 3 cut(s) 661, 1467, 1611
BseLI CCNNNNNNNGG 3 cut(s) 179, 737, 757
BseMI GCAATG 3 cut(s) 15, 227, 642
BseMII CTCAG 2 cut(s) 642, 1016
BseNI ACTGG 4 cut(s) 331, 565, 595, 1477
BseRI GAGGAG 3 cut(s) 887, 1124, 1263
BseXI GCAGC 3 cut(s) 1295, 1349, 1692
BseYI CCCAGC 2 cut(s) 702, 1033
BshFI GGCC 4 cut(s) 14, 836, 1096, 1132
BshNI GGYRCC 1 cut(s) 392
BshTI ACCGGT 1 cut(s) 375
BshVI ATCGAT 1 cut(s) 165
BsiHKAI GWGCWC 1 cut(s) 1541
BsiSI CCGG 2 cut(s) 376, 582
BslFI GGGAC 3 cut(s) 512, 571, 1099
BslI CCNNNNNNNGG 3 cut(s) 179, 737, 757
BsmAI GTCTC 1 cut(s) 122
BsmFI GGGAC 3 cut(s) 512, 571, 1099
BsnI GGCC 4 cut(s) 14, 836, 1096, 1132
Bso31I GGTCTC 1 cut(s) 122
Bsp1286I GDGCHC 1 cut(s) 1541
Bsp13I TCCGGA 1 cut(s) 581
Bsp1720I GCTNAGC 1 cut(s) 1002
Bsp19I CCATGG 1 cut(s) 1053
BspACI CCGC 1 cut(s) 1026
BspANI GGCC 4 cut(s) 14, 836, 1096, 1132
BspCNI CTCAG 2 cut(s) 643, 1015
BspDI ATCGAT 1 cut(s) 165
BspEI TCCGGA 1 cut(s) 581
BspLI GGNNCC 4 cut(s) 394, 708, 749, 1353
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 2 cut(s) 380, 452
BspPI GGATC 6 cut(s) 449, 1385, 1515, 1566, 1644, 1670
BspT107I GGYRCC 1 cut(s) 392
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 3 cut(s) 15, 227, 642
BsrFI RCCGGY 1 cut(s) 375
BsrI ACTGG 4 cut(s) 331, 565, 595, 1477
BssAI RCCGGY 1 cut(s) 375
BssECI CCNNGG 2 cut(s) 1053, 1127
BssT1I CCWWGG 2 cut(s) 1053, 1127
Bst2UI CCWGG 2 cut(s) 159, 1106
Bst4CI ACNGT 5 cut(s) 312, 372, 824, 1222, 1582
Bst6I CTCTTC 4 cut(s) 54, 1087, 1281, 1731
BstBAI YACGTR 1 cut(s) 884
BstC8I GCNNGC 5 cut(s) 63, 681, 834, 926, 1024
BstDEI CTNAG 6 cut(s) 9, 339, 651, 966, 1002, 1751
BstDSI CCRYGG 1 cut(s) 1053
BstF5I GGATG 3 cut(s) 661, 1467, 1611
BstHHI GCGC 1 cut(s) 1569
BstMAI GTCTC 1 cut(s) 122
BstMWI GCNNNNNNNGC 2 cut(s) 71, 998
BstNI CCWGG 2 cut(s) 159, 1106
BstNSI RCATGY 3 cut(s) 65, 928, 1765
BstSCI CCNGG 2 cut(s) 157, 1104
BstSFI CTRYAG 6 cut(s) 368, 387, 717, 1341, 1542, 1551
BstSNI TACGTA 1 cut(s) 884
BstV1I GCAGC 3 cut(s) 1295, 1349, 1692
BstV2I GAAGAC 1 cut(s) 1431
BstX2I RGATCY 3 cut(s) 454, 1330, 1507
BstYI RGATCY 3 cut(s) 454, 1330, 1507
Bsu15I ATCGAT 1 cut(s) 165
Bsu36I CCTNAGG 1 cut(s) 651
BsuI GTATCC 2 cut(s) 589, 1060
BsuRI GGCC 4 cut(s) 14, 836, 1096, 1132
BsuTUI ATCGAT 1 cut(s) 165
BtgI CCRYGG 1 cut(s) 1053
BtsCI GGATG 3 cut(s) 661, 1467, 1611
BtsI GCAGTG 2 cut(s) 384, 1482
BtsIMutI CAGTG 7 cut(s) 317, 324, 384, 588, 1428, 1470, 1482
BveI ACCTGC 2 cut(s) 380, 452
Cac8I GCNNGC 5 cut(s) 63, 681, 834, 926, 1024
CfoI GCGC 1 cut(s) 1569
Cfr10I RCCGGY 1 cut(s) 375
Cfr13I GGNCC 2 cut(s) 972, 1320
ClaI ATCGAT 1 cut(s) 165
Csp6I GTAC 4 cut(s) 373, 885, 1124, 1765
CspAI ACCGGT 1 cut(s) 375
CviAII CATG 9 cut(s) 62, 544, 925, 1054, 1264, 1280, 1439, 1627, 1762
CviQI GTAC 4 cut(s) 373, 885, 1124, 1765
DdeI CTNAG 6 cut(s) 9, 339, 651, 966, 1002, 1751
EaeI YGGCCR 1 cut(s) 834
Eam1104I CTCTTC 4 cut(s) 54, 1087, 1281, 1731
EarI CTCTTC 4 cut(s) 54, 1087, 1281, 1731
Ecl136II GAGCTC 1 cut(s) 1539
Eco105I TACGTA 1 cut(s) 884
Eco130I CCWWGG 2 cut(s) 1053, 1127
Eco24I GRGCYC 1 cut(s) 1541
Eco31I GGTCTC 1 cut(s) 122
Eco47I GGWCC 2 cut(s) 972, 1320
Eco53kI GAGCTC 1 cut(s) 1539
Eco57I CTGAAG 3 cut(s) 35, 198, 1755
Eco81I CCTNAGG 1 cut(s) 651
EcoICRI GAGCTC 1 cut(s) 1539
EcoRI GAATTC 1 cut(s) 1401
EcoRII CCWGG 2 cut(s) 157, 1104
EcoT14I CCWWGG 2 cut(s) 1053, 1127
EcoT38I GRGCYC 1 cut(s) 1541
ErhI CCWWGG 2 cut(s) 1053, 1127
FaeI CATG 9 cut(s) 65, 547, 928, 1057, 1267, 1283, 1442, 1630, 1765
FalI AAGNNNNNCTT 4 cut(s) 792, 824, 1615, 1647
FaqI GGGAC 3 cut(s) 512, 571, 1099
FatI CATG 9 cut(s) 61, 543, 924, 1053, 1263, 1279, 1438, 1626, 1761
FbaI TGATCA 1 cut(s) 1435
Fnu4HI GCNGC 3 cut(s) 1284, 1338, 1706
FokI GGATG 3 cut(s) 668, 1474, 1618
FriOI GRGCYC 1 cut(s) 1541
Fsp4HI GCNGC 3 cut(s) 1284, 1338, 1706
FspBI CTAG 2 cut(s) 206, 1727
FspI TGCGCA 1 cut(s) 1568
GlaI GCGC 1 cut(s) 1568
GluI GCNGC 3 cut(s) 1284, 1338, 1706
GsaI CCCAGC 2 cut(s) 706, 1037
HaeIII GGCC 4 cut(s) 14, 836, 1096, 1132
HapII CCGG 2 cut(s) 376, 582
HhaI GCGC 1 cut(s) 1569
Hin1II CATG 9 cut(s) 65, 547, 928, 1057, 1267, 1283, 1442, 1630, 1765
Hin6I GCGC 1 cut(s) 1567
HinP1I GCGC 1 cut(s) 1567
HincII GTYRAC 2 cut(s) 763, 1138
HindII GTYRAC 2 cut(s) 763, 1138
HindIII AAGCTT 3 cut(s) 341, 681, 842
HinfI GANTC 7 cut(s) 86, 162, 350, 872, 1112, 1210, 1412
HpaII CCGG 2 cut(s) 376, 582
HphI GGTGA 5 cut(s) 95, 117, 497, 1040, 1532
Hpy166II GTNNAC 4 cut(s) 763, 797, 1138, 1446
Hpy188I TCNGA 9 cut(s) 178, 447, 859, 877, 957, 1153, 1311, 1374, 1735
Hpy8I GTNNAC 4 cut(s) 763, 797, 1138, 1446
HpyAV CCTTC 9 cut(s) 31, 173, 507, 611, 747, 751, 1107, 1451, 1523
HpyCH4III ACNGT 5 cut(s) 312, 372, 824, 1222, 1582
HpyCH4IV ACGT 1 cut(s) 883
HpyF10VI GCNNNNNNNGC 2 cut(s) 71, 998
HpyF3I CTNAG 6 cut(s) 9, 339, 651, 966, 1002, 1751
HpySE526I ACGT 1 cut(s) 883
Hsp92II CATG 9 cut(s) 65, 547, 928, 1057, 1267, 1283, 1442, 1630, 1765
HspAI GCGC 1 cut(s) 1567
Kpn2I TCCGGA 1 cut(s) 581
Ksp22I TGATCA 1 cut(s) 1435
LmnI GCTCC 3 cut(s) 652, 706, 1276
Lsp1109I GCAGC 3 cut(s) 1295, 1349, 1692
LweI GCATC 5 cut(s) 116, 424, 1009, 1057, 1596
MaeI CTAG 2 cut(s) 206, 1727
MaeII ACGT 1 cut(s) 883
MaeIII GTNAC 2 cut(s) 123, 538
MflI RGATCY 3 cut(s) 454, 1330, 1507
MhlI GDGCHC 1 cut(s) 1541
MlyI GAGTC 2 cut(s) 359, 1121
MmeI TCCRAC 2 cut(s) 1209, 1723
MroI TCCGGA 1 cut(s) 581
MroXI GAANNNNTTC 1 cut(s) 843
MseI TTAA 8 cut(s) 33, 435, 506, 614, 813, 987, 1170, 1368
MslI CAYNNNNRTG 3 cut(s) 420, 669, 1017
MspA1I CMGCKG 2 cut(s) 1340, 1705
MspI CCGG 2 cut(s) 376, 582
MspR9I CCNGG 2 cut(s) 159, 1106
MvaI CCWGG 2 cut(s) 159, 1106
MwoI GCNNNNNNNGC 2 cut(s) 71, 998
NcoI CCATGG 1 cut(s) 1053
NlaIII CATG 9 cut(s) 65, 547, 928, 1057, 1267, 1283, 1442, 1630, 1765
NlaIV GGNNCC 4 cut(s) 394, 708, 749, 1353
NmuCI GTSAC 2 cut(s) 123, 538
NsbI TGCGCA 1 cut(s) 1568
NspI RCATGY 3 cut(s) 65, 928, 1765
PaeI GCATGC 2 cut(s) 65, 928
PaqCI CACCTGC 2 cut(s) 380, 452
PdmI GAANNNNTTC 1 cut(s) 843
PfeI GAWTC 5 cut(s) 86, 162, 872, 1210, 1412
PfoI TCCNGGA 2 cut(s) 157, 1104
PinAI ACCGGT 1 cut(s) 375
PkrI GCNGC 3 cut(s) 1285, 1339, 1707
PleI GAGTC 2 cut(s) 358, 1120
PpsI GAGTC 2 cut(s) 358, 1120
Ppu21I YACGTR 1 cut(s) 884
Psp124BI GAGCTC 1 cut(s) 1541
Psp6I CCWGG 2 cut(s) 157, 1104
PspFI CCCAGC 2 cut(s) 702, 1033
PspGI CCWGG 2 cut(s) 157, 1104
PspN4I GGNNCC 4 cut(s) 394, 708, 749, 1353
PspPI GGNCC 2 cut(s) 972, 1320
PsrI GAACNNNNNNTAC 2 cut(s) 1335, 1367
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 3 cut(s) 454, 1330, 1507
PvuII CAGCTG 2 cut(s) 1340, 1705
RsaI GTAC 4 cut(s) 374, 886, 1125, 1766
RsaNI GTAC 4 cut(s) 373, 885, 1124, 1765
RseI CAYNNNNRTG 3 cut(s) 420, 669, 1017
SacI GAGCTC 1 cut(s) 1541
SaqAI TTAA 8 cut(s) 33, 435, 506, 614, 813, 987, 1170, 1368
SatI GCNGC 3 cut(s) 1284, 1338, 1706
Sau96I GGNCC 2 cut(s) 972, 1320
SchI GAGTC 2 cut(s) 359, 1121
ScrFI CCNGG 2 cut(s) 159, 1106
SduI GDGCHC 1 cut(s) 1541
SfaNI GCATC 5 cut(s) 116, 424, 1009, 1057, 1596
SfcI CTRYAG 6 cut(s) 368, 387, 717, 1341, 1542, 1551
SinI GGWCC 2 cut(s) 972, 1320
SmiMI CAYNNNNRTG 3 cut(s) 420, 669, 1017
SmlI CTYRAG 3 cut(s) 119, 899, 1655
SmoI CTYRAG 3 cut(s) 119, 899, 1655
SnaBI TACGTA 1 cut(s) 884
SphI GCATGC 2 cut(s) 65, 928
SsiI CCGC 1 cut(s) 1026
SspI AATATT 1 cut(s) 985
SspMI CTAG 2 cut(s) 206, 1727
SstI GAGCTC 1 cut(s) 1541
StyD4I CCNGG 2 cut(s) 157, 1104
StyI CCWWGG 2 cut(s) 1053, 1127
TaaI ACNGT 5 cut(s) 312, 372, 824, 1222, 1582
TaiI ACGT 1 cut(s) 886
TaqI TCGA 1 cut(s) 165
TatI WGTACW 1 cut(s) 1764
TfiI GAWTC 5 cut(s) 86, 162, 872, 1210, 1412
Tru1I TTAA 8 cut(s) 33, 435, 506, 614, 813, 987, 1170, 1368
Tru9I TTAA 8 cut(s) 33, 435, 506, 614, 813, 987, 1170, 1368
TscAI CASTG 7 cut(s) 317, 331, 391, 595, 1435, 1477, 1489
TseFI GTSAC 2 cut(s) 123, 538
TseI GCWGC 3 cut(s) 1283, 1337, 1705
Tsp45I GTSAC 2 cut(s) 123, 538
TspRI CASTG 7 cut(s) 317, 331, 391, 595, 1435, 1477, 1489
VpaK11BI GGWCC 2 cut(s) 972, 1320
XapI RAATTY 5 cut(s) 35, 568, 1087, 1401, 1592
XceI RCATGY 3 cut(s) 65, 928, 1765
XmnI GAANNNNTTC 1 cut(s) 843
XspI CTAG 2 cut(s) 206, 1727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.