Rh2AG412900

F-Box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
61275757 .. 61285042
9286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG412900.1

Sequence Viewer

Length: 216 bp
ATGACAGAGTCGTGGCTTGCATCATTTGGAAGTATGAGTAGAAAAGCATTTGTTGATCTAGCACTGTTACACCGGCACTTGCCGGATGAGTTGCTCTTTGAGGTCTCTAACCCAGTTCACTTGATTGCTTCAGAAGGACTCAAGCACAGAGTCTTTGACACATCACTTGCTGCCTTCAGGGAGATGAGGAGCATGCTTACAGAAAAATGCAGTTGA

Protein Analysis

71

Amino Acids

8.09

Weight (kDa)

6.39

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 2 cut(s) 114, 160
Alw26I GTCTC 1 cut(s) 109
ApeKI GCWGC 1 cut(s) 170
BbvI GCAGC 1 cut(s) 157
BcoDI GTCTC 1 cut(s) 109
BfaI CTAG 1 cut(s) 59
BisI GCNGC 1 cut(s) 171
BlsI GCNGC 1 cut(s) 172
BmrI ACTGGG 1 cut(s) 107
BmsI GCATC 1 cut(s) 29
BmuI ACTGGG 1 cut(s) 107
BpuEI CTTGAG 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 109
Bse118I RCCGGY 1 cut(s) 72
Bse1I ACTGG 1 cut(s) 113
BseGI GGATG 1 cut(s) 91
BseNI ACTGG 1 cut(s) 113
BseRI GAGGAG 1 cut(s) 202
BseXI GCAGC 1 cut(s) 157
BsiSI CCGG 2 cut(s) 73, 83
BsmAI GTCTC 1 cut(s) 109
Bso31I GGTCTC 1 cut(s) 109
Bsp143I GATC 1 cut(s) 55
BspTNI GGTCTC 1 cut(s) 109
BsrFI RCCGGY 1 cut(s) 72
BsrI ACTGG 1 cut(s) 113
BssAI RCCGGY 1 cut(s) 72
BssMI GATC 1 cut(s) 55
Bst4CI ACNGT 1 cut(s) 66
BstC8I GCNNGC 2 cut(s) 18, 194
BstF5I GGATG 1 cut(s) 91
BstKTI GATC 1 cut(s) 58
BstMAI GTCTC 1 cut(s) 109
BstMBI GATC 1 cut(s) 55
BstNSI RCATGY 1 cut(s) 196
BstV1I GCAGC 1 cut(s) 157
BtsCI GGATG 1 cut(s) 91
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 2 cut(s) 18, 194
Cfr10I RCCGGY 1 cut(s) 72
CviAII CATG 1 cut(s) 193
CviJI RGCY 1 cut(s) 16
CviKI_1 RGCY 1 cut(s) 16
DpnI GATC 1 cut(s) 57
DpnII GATC 1 cut(s) 55
Eco31I GGTCTC 1 cut(s) 109
Eco57I CTGAAG 2 cut(s) 114, 160
FaeI CATG 1 cut(s) 196
FaiI YATR 2 cut(s) 35, 194
FatI CATG 1 cut(s) 192
Fnu4HI GCNGC 1 cut(s) 171
FokI GGATG 1 cut(s) 98
Fsp4HI GCNGC 1 cut(s) 171
FspBI CTAG 1 cut(s) 59
GluI GCNGC 1 cut(s) 171
HapII CCGG 2 cut(s) 73, 83
Hin1II CATG 1 cut(s) 196
HinfI GANTC 3 cut(s) 8, 138, 150
HpaII CCGG 2 cut(s) 73, 83
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 1 cut(s) 133
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 2 cut(s) 128, 184
HpyCH4III ACNGT 1 cut(s) 66
HpyCH4V TGCA 2 cut(s) 20, 210
Hsp92II CATG 1 cut(s) 196
Kzo9I GATC 1 cut(s) 55
LmnI GCTCC 1 cut(s) 189
LpnPI CCDG 4 cut(s) 86, 96, 126, 163
Lsp1109I GCAGC 1 cut(s) 157
LweI GCATC 1 cut(s) 29
MaeI CTAG 1 cut(s) 59
MaeIII GTNAC 1 cut(s) 66
MalI GATC 1 cut(s) 57
MboI GATC 1 cut(s) 55
MlyI GAGTC 3 cut(s) 17, 132, 159
MnlI CCTC 2 cut(s) 94, 180
MspI CCGG 2 cut(s) 73, 83
NdeII GATC 1 cut(s) 55
NlaIII CATG 1 cut(s) 196
NspI RCATGY 1 cut(s) 196
PaeI GCATGC 1 cut(s) 196
PflFI GACNNNGTC 1 cut(s) 7
PkrI GCNGC 1 cut(s) 172
PleI GAGTC 3 cut(s) 16, 132, 158
PpsI GAGTC 3 cut(s) 16, 132, 158
PsyI GACNNNGTC 1 cut(s) 7
SatI GCNGC 1 cut(s) 171
Sau3AI GATC 1 cut(s) 55
SchI GAGTC 3 cut(s) 17, 132, 159
SetI ASST 1 cut(s) 105
SfaNI GCATC 1 cut(s) 29
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
SphI GCATGC 1 cut(s) 196
SspMI CTAG 1 cut(s) 59
TaaI ACNGT 1 cut(s) 66
TscAI CASTG 1 cut(s) 69
TseI GCWGC 1 cut(s) 170
TspRI CASTG 1 cut(s) 69
Tth111I GACNNNGTC 1 cut(s) 7
XceI RCATGY 1 cut(s) 196
XspI CTAG 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.