Rw6G043670

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
66908441 .. 66909238
798 bp
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UTR
Exon/CDS
Intron
Rw6G043670.1

Sequence Viewer

Length: 333 bp
ATGATTGTTGGCATAATTGGTTCACAAGACCAACTTGTTAAAGAATTATGTGTTATGCTGGCCGAAAAGCTTCTCAACAAATCTGATTATGACATTGATTCAGAGATACGTACTCTTGAACTCCACAAGTTTGAAGATACAGAAATGCAGTTCATGGTTGCTCCTCTTCATGCAGCAATTATAATGCAATTTCAAGATCAGAAAAGCTGGACCTCCAAAGATCTTGCATCTGCAGTTGGAGAAGATACTGATGACCATGTGTTTACACTAATGGAAGGGATGATTGGTTCTTGCCTCTGTTTTCTATTCTGCTTCGTCATTTTCTATTTGTAG

Protein Analysis

110

Amino Acids

12.55

Weight (kDa)

4.34

Isoelectric Point (pI)

29.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 182
AcoI YGGCCR 1 cut(s) 60
AfaI GTAC 1 cut(s) 112
AgsI TTSAA 3 cut(s) 119, 134, 194
AjuI GAANNNNNNNTTGG 2 cut(s) 267, 299
AloI GAACNNNNNNTCC 2 cut(s) 271, 303
AluBI AGCT 2 cut(s) 70, 207
AluI AGCT 2 cut(s) 70, 207
AoxI GGCC 1 cut(s) 60
ApeKI GCWGC 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 69
AspS9I GGNCC 1 cut(s) 210
AvaII GGWCC 1 cut(s) 210
BbvI GCAGC 1 cut(s) 185
BfmI CTRYAG 1 cut(s) 231
BglII AGATCT 1 cut(s) 220
BisI GCNGC 1 cut(s) 174
BlsI GCNGC 1 cut(s) 175
Bme18I GGWCC 1 cut(s) 210
BmgT120I GGNCC 1 cut(s) 210
BmsI GCATC 1 cut(s) 236
BsaAI YACGTR 1 cut(s) 110
BseGI GGATG 1 cut(s) 285
BseRI GAGGAG 1 cut(s) 153
BseXI GCAGC 1 cut(s) 185
BshFI GGCC 1 cut(s) 62
BsnI GGCC 1 cut(s) 62
Bsp143I GATC 2 cut(s) 196, 220
BspANI GGCC 1 cut(s) 62
BspMAI CTGCAG 1 cut(s) 235
BssMI GATC 2 cut(s) 196, 220
Bst6I CTCTTC 1 cut(s) 171
BstBAI YACGTR 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 60
BstF5I GGATG 1 cut(s) 285
BstKTI GATC 2 cut(s) 199, 223
BstMBI GATC 2 cut(s) 196, 220
BstSFI CTRYAG 1 cut(s) 231
BstSNI TACGTA 1 cut(s) 110
BstV1I GCAGC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 220
BstYI RGATCY 1 cut(s) 220
BsuRI GGCC 1 cut(s) 62
BtsCI GGATG 1 cut(s) 285
Cac8I GCNNGC 1 cut(s) 60
Cfr13I GGNCC 1 cut(s) 210
Csp6I GTAC 1 cut(s) 111
CviAII CATG 3 cut(s) 154, 170, 257
CviJI RGCY 3 cut(s) 62, 70, 207
CviKI_1 RGCY 3 cut(s) 62, 70, 207
CviQI GTAC 1 cut(s) 111
DpnI GATC 2 cut(s) 198, 222
DpnII GATC 2 cut(s) 196, 220
EaeI YGGCCR 1 cut(s) 60
Eam1104I CTCTTC 1 cut(s) 171
EarI CTCTTC 1 cut(s) 171
Eco105I TACGTA 1 cut(s) 110
Eco47I GGWCC 1 cut(s) 210
FaeI CATG 3 cut(s) 157, 173, 260
FaiI YATR 8 cut(s) 14, 49, 56, 90, 155, 171, 182, 258
FalI AAGNNNNNCTT 2 cut(s) 18, 50
FatI CATG 3 cut(s) 153, 169, 256
Fnu4HI GCNGC 1 cut(s) 174
FokI GGATG 1 cut(s) 292
Fsp4HI GCNGC 1 cut(s) 174
GluI GCNGC 1 cut(s) 174
HaeIII GGCC 1 cut(s) 62
Hin1II CATG 3 cut(s) 157, 173, 260
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 1 cut(s) 98
Hpy166II GTNNAC 2 cut(s) 23, 264
Hpy188I TCNGA 3 cut(s) 85, 103, 201
Hpy188III TCNNGA 2 cut(s) 116, 194
Hpy8I GTNNAC 2 cut(s) 23, 264
HpyAV CCTTC 1 cut(s) 269
HpyCH4IV ACGT 1 cut(s) 109
HpyCH4V TGCA 5 cut(s) 148, 173, 187, 227, 233
HpySE526I ACGT 1 cut(s) 109
Hsp92II CATG 3 cut(s) 157, 173, 260
Kzo9I GATC 2 cut(s) 196, 220
LmnI GCTCC 1 cut(s) 166
LpnPI CCDG 2 cut(s) 44, 193
Lsp1109I GCAGC 1 cut(s) 185
LweI GCATC 1 cut(s) 236
MaeII ACGT 1 cut(s) 109
MalI GATC 2 cut(s) 198, 222
MboI GATC 2 cut(s) 196, 220
MboII GAAGA 3 cut(s) 146, 158, 254
MflI RGATCY 1 cut(s) 220
MluCI AATT 4 cut(s) 15, 44, 177, 188
MmeI TCCRAC 1 cut(s) 217
MnlI CCTC 3 cut(s) 174, 223, 305
MroXI GAANNNNTTC 1 cut(s) 69
MseI TTAA 1 cut(s) 39
NdeII GATC 2 cut(s) 196, 220
NlaIII CATG 3 cut(s) 157, 173, 260
PdmI GAANNNNTTC 1 cut(s) 69
PfeI GAWTC 1 cut(s) 98
PkrI GCNGC 1 cut(s) 175
Ppu21I YACGTR 1 cut(s) 110
PsiI TTATAA 1 cut(s) 182
PspPI GGNCC 1 cut(s) 210
PstI CTGCAG 1 cut(s) 235
PsuI RGATCY 1 cut(s) 220
RsaI GTAC 1 cut(s) 112
RsaNI GTAC 1 cut(s) 111
SaqAI TTAA 1 cut(s) 39
SatI GCNGC 1 cut(s) 174
Sau3AI GATC 2 cut(s) 196, 220
Sau96I GGNCC 1 cut(s) 210
SetI ASST 4 cut(s) 72, 112, 209, 215
SfaNI GCATC 1 cut(s) 236
SfcI CTRYAG 1 cut(s) 231
SinI GGWCC 1 cut(s) 210
SnaBI TACGTA 1 cut(s) 110
Sse9I AATT 4 cut(s) 15, 44, 177, 188
TaiI ACGT 1 cut(s) 112
TasI AATT 4 cut(s) 15, 44, 177, 188
TfiI GAWTC 1 cut(s) 98
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
TseI GCWGC 1 cut(s) 173
TspDTI ATGAA 2 cut(s) 142, 158
VpaK11BI GGWCC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.