Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0037339.1

Orthogroup ID

OG0000801

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 10141

Gene Structure 10141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0037339.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

tgttccaggtttaggcgtttagcaatggcggattcgatttcatcaacctgcaatctagggtttctcgacacgctcagcgaaacctccatccacgaaatcgtcgaaagctactcctccttctgcgccgccactgaaaccctcctcaacggcgccggagacctctccgtgggcccgcaactcgtctcccacgtccaccgcctctgcagccacggcctcgagtctctcgtccgcgaccacttcctgggcgcgctcgagagaaccttcgagaaaaacggcgcctccaaattctggcggcatttcgaggcacacgacgacgtttcgatcggagagcaagtgttctacaacgccttggaggaaatctcactggaaaagcagtaccaggagaagtgcttgctgatgctggttcatgctttacagacttatggaggaagaagaagccgtgattccgatgacgtcagcccggagctctttgctaagtatcaattatcagtgtcctcggttcttatggccactcttcctcggcaatttccagagatactcaactggtattttaagggaaggttggaggaactgagtactataatggccggagacgagcctcgtggcgatgaggatgaagctgacagagatgatatggagttggatgagaaatgcagagtgtcatacaggagtggacaaatggagattgatgaatgttatccccaggggaggttctttgataataataaattggtcaacaacatagggcgggttgtacatgatttgaggagtcttggatttacatctatgactgaagatgcatatgcatctgctatctttttgtttcttaaggacaaagttcatgaccttgctggtgatgattatcggatttctgttttggagtctattaagaggtggatacaggctgtgcctcttcagttcttgcatgctctacttgcttatcttggtgattctgttagttatgaaagtgcatcatcaggtctcaagtcacctttggctaaatgccctgcttcattctatcctggaatcgatactccatctgaaggtcttgtaagatggcagttgcgactagagtattttgcttatgaaacattgcaagatttgagaatagcaaaattatttgagattattgtggattatcctgacagctctcctgcgattgaagatttgaaacagtgtcttgaatacactggacaacattctaagcttgtggagtcatttatttcagcactacagtaccggttgctcactgcaggtgcctcaacaaatgacattttgcatcaatatgtttcaacgattaaggcacttcggacaatagatccagcaggtgttttccttgaagcagtcggtgagccaataagggactatttaaggggaaggaaagacaccataaagtgcattgtgaccatgcttaccgatgggactggtgcaaattctaatgtatccggaaacactggcgatagccttcttgaagaattaaatagagatgaagaaagccaagagaacattgctcctgaggatgactttcatactgatgataagcaagcttggataaatgcttcacgctgggagcctgaccctgtagaagctgaccccttgaaaggtagcaggaaccgaaggaaggttgacatacttggaatgattgttggcataattggttcacaagaccaacttgttaatgaataccgtgttatgctggccgaaaagcttctcaacaaatctgattatgacattgattcagagatacgtactcttgaactcctcaagatacattttggagagaacagcatgcagaaatgtgaaattatgctcaatgatctgattggttctaagaggaccaacactaatattaaagcaaccatagctcagccatctcatacaggcggtgagctgggggataacagggtatccatggatattcttgatgctacaattatctcttcaaatttttggccttcaatccaggttggcagtcattacctgtgtattttggatgtcaattcgattgttgaggattcgatttcgtcaaaggttttggggaagaacagtgattactatggtgttgggctttgggtacttgcttcatttatcaaccattcatgtattcccaatgcaaggcgtttgcatgttggggactatgtgattgttcatgcttcaagagatgtcaaggctggtgaggagctaacatttgcatattttgatgtgctgaacccgttggaaaagcgcaacgaaatgtcaaagacttgggggtttaggtgcaactgcaggaggtgtaagtttgaggctgaactatgttcgaggcaagaaggcattggagagattgagatgggtttcgaaagagggatggattctggtgctgcggtctataggctcgaggaaggcatgagaaaatggaaggtgaaggaaaaggaaaaagggtacttgagagcttcattttgggctgcatatggctcagagaagttgatgagaagttggggaagacggatcccaatgatggagtccgtggttgatagcattgtggaagctgtgggaagtgatgagagggtgttgaagatggtggtggagaagataaagaaaggtaatggtggcagttcagtggtggaaatagaaagagctttgaagttgggaagaggagtttatggaaaagtaatgaagaagcaagcaatgaagagtcttcttggccttggcattcttgaacccagctattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000152 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0005819 GO:0005856 GO:0007275 GO:0008150 GO:0009553 GO:0009561 GO:0015630 GO:0019899 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044389 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC2 Cullin

Protein Analysis

902

Amino Acids

101.49

Weight (kDa)

5.27

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04660
fragaria_vesca	FvH4_5g29350 FvH4_5g29350 FvH4_5g29350 FvH4_5g29350 FvH4_5g29350
malus_domestica	MD13G1068900.v1.1 MD16G1069200.v1.1
prunus_persica	Prupe.1G035400_v2.0.a1 Prupe.1G035400_v2.0.a1 Prupe.1G191200_v2.0.a1
pyrus_communis	pycom16g06020
rosa_chinensis	RchiOBHm_Chr1g0327871 RchiOBHm_Chr2g0121271 RchiOBHm_Chr4g0439421 RchiOBHm_Chr7g0200631
rosa_laevigata	RLG00000006274 RLG00000011822 RLG00000018454 RLG00000034065 RLG00000034779 RLG00000035517
rosa_multiflora	Rmu_sc0002635.1_g000001 Rmu_sc0006782.1_g000010 Rmu_sc0037339.1_g000001
rosa_roxburghii	Rroxscaffold_159G00433030 Rroxscaffold_3G00237290 Rroxscaffold_3G00259010 Rroxscaffold_4G00283810 Rroxscaffold_5G00380330 Rroxscaffold_6G00397040 Rroxscaffold_7G00199350 Rroxscaffold_7G00199460 Rroxscaffold_7G00212760 Rroxscaffold_7G00213330
rosa_rugosa	Rorug01G0198100 Rorug03G0008800 Rorug04G0030200 Rorug04G0317800 Rorug04G0317900 Rorug04G0318000 Rorug04G0443500 Rorug05G0260700 Rorug05G0260800 Rorug05G0536400 Rorug05G0536500
rosa_samantha	Rh1BG117800 Rh2AG412900 Rh2BG241400 Rh2CG278400 Rh2CG398900 Rh2CG490800 Rh4AG369300 Rh4BG017200 Rh4BG381100 Rh4CG395700 Rh4DG375700 Rh4DG375800 Rh5AG534500 Rh5BG490100 Rh5CG514100 Rh5DG386800 Rh6BG137000 Rh6CG037000 Rh6DG121500 Rh7CG205400
rosa_wichuraiana	Rw3G022720 Rw4G031480 Rw6G043670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1244, 1316
AatII	GACGTC	1 cut(s)	456
Acc36I	ACCTGC	3 cut(s)	56, 1244, 1316
AccB1I	GGYRCC	3 cut(s)	149, 275, 1256
AccB7I	CCANNNNNTGG	2 cut(s)	241, 288
AccII	CGCG	2 cut(s)	231, 248
AccIII	TCCGGA	1 cut(s)	1445
AciI	CCGC	9 cut(s)	29, 126, 173, 196, 229, 292, 748, 1884, 2360
AclWI	GGATC	3 cut(s)	1313, 2479, 2492
AcoI	YGGCCR	3 cut(s)	507, 585, 1698
AcsI	RAATTY	3 cut(s)	284, 1432, 1945
AcuI	CTGAAG	3 cut(s)	813, 899, 1062
AcyI	GRCGYC	3 cut(s)	150, 276, 453
AfaI	GTAC	7 cut(s)	377, 577, 756, 1238, 1750, 2076, 2420
AflII	CTTAAG	1 cut(s)	827
AgeI	ACCGGT	1 cut(s)	1239
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	6 cut(s)	5, 240, 378, 702, 1021, 1962
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	5 cut(s)	150, 187, 225, 585, 986
AlwI	GGATC	3 cut(s)	1313, 2479, 2492
Ama87I	CYCGRG	3 cut(s)	215, 251, 2372
Aor13HI	TCCGGA	1 cut(s)	1445
AoxI	GGCC	7 cut(s)	169, 211, 507, 585, 1698, 1952, 2680
ApaI	GGGCCC	1 cut(s)	173
ApeKI	GCWGC	3 cut(s)	204, 2357, 2441
ApoI	RAATTY	3 cut(s)	284, 1432, 1945
AsiGI	ACCGGT	1 cut(s)	1239
Asp700I	GAANNNNTTC	1 cut(s)	1707
AspLEI	GCGC	6 cut(s)	125, 152, 248, 250, 278, 2226
AspS9I	GGNCC	3 cut(s)	169, 170, 1836
AsuC2I	CCSGG	1 cut(s)	461
AsuHPI	GGTGA	7 cut(s)	866, 959, 981, 1361, 1898, 2186, 2410
AsuII	TTCGAA	1 cut(s)	2334
AvaI	CYCGRG	3 cut(s)	215, 251, 2372
AvaII	GGWCC	1 cut(s)	1836
AxyI	CCTNAGG	1 cut(s)	1515
BaeGI	GKGCMC	1 cut(s)	173
BaeI	ACNNNNGTAYC	2 cut(s)	1220, 1253
BalI	TGGCCA	1 cut(s)	509
BamHI	GGATCC	1 cut(s)	2484
BanI	GGYRCC	3 cut(s)	149, 275, 1256
BanII	GRGCYC	2 cut(s)	173, 468
BauI	CACGAG	1 cut(s)	600
BbsI	GAAGAC	2 cut(s)	2485, 2666
Bbv12I	GWGCWC	1 cut(s)	468
BbvI	GCAGC	3 cut(s)	216, 2344, 2428
BccI	CCATC	9 cut(s)	95, 1045, 1050, 1412, 1879, 2320, 2338, 2488, 2548
BceAI	ACGGC	4 cut(s)	163, 226, 289, 423
BciT130I	CCWGG	6 cut(s)	7, 242, 380, 704, 1023, 1964
BciVI	GTATCC	3 cut(s)	891, 1453, 1918
BcnI	CCSGG	1 cut(s)	461
BcoDI	GTCTC	5 cut(s)	150, 187, 225, 585, 986
BfaI	CTAG	2 cut(s)	56, 1070
BfmI	CTRYAG	6 cut(s)	202, 1232, 1251, 1581, 2263, 2365
BfoI	RGCGCY	2 cut(s)	153, 279
BfrI	CTTAAG	1 cut(s)	827
BfuAI	ACCTGC	3 cut(s)	56, 1244, 1316
BfuI	GTATCC	3 cut(s)	891, 1453, 1918
BisI	GCNGC	5 cut(s)	126, 205, 293, 2358, 2442
BlpI	GCTNAGC	2 cut(s)	74, 1866
BlsI	GCNGC	5 cut(s)	127, 206, 294, 2359, 2443
BmcAI	AGTACT	1 cut(s)	577
Bme1390I	CCNGG	7 cut(s)	7, 242, 380, 461, 704, 1023, 1964
Bme18I	GGWCC	1 cut(s)	1836
BmeT110I	CYCGRG	3 cut(s)	215, 251, 2372
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	3 cut(s)	169, 170, 1836
BmiI	GGNNCC	7 cut(s)	151, 171, 277, 1258, 1572, 1613, 2486
BmrFI	CCNGG	7 cut(s)	7, 242, 380, 461, 704, 1023, 1964
BmsI	GCATC	6 cut(s)	387, 787, 815, 980, 1288, 1915
BpiI	GAAGAC	2 cut(s)	2485, 2666
BplI	GAGNNNNNCTC	2 cut(s)	344, 376
Bpu1102I	GCTNAGC	2 cut(s)	74, 1866
Bpu14I	TTCGAA	1 cut(s)	2334
BpuEI	CTTGAG	3 cut(s)	968, 1748, 2443
BpuMI	CCSGG	1 cut(s)	461
Bsa29I	ATCGAT	1 cut(s)	1029
BsaAI	YACGTR	1 cut(s)	1748
BsaBI	GATNNNNATC	2 cut(s)	781, 861
BsaHI	GRCGYC	3 cut(s)	150, 276, 453
BsaI	GGTCTC	2 cut(s)	150, 986
BsaWI	WCCGGW	2 cut(s)	1239, 1445
BsaXI	ACNNNNNCTCC	4 cut(s)	263, 293, 318, 348
Bse118I	RCCGGY	1 cut(s)	1239
Bse1I	ACTGG	5 cut(s)	369, 548, 1195, 1429, 1459
Bse21I	CCTNAGG	1 cut(s)	1515
Bse3DI	GCAATG	4 cut(s)	30, 1091, 1506, 2670
Bse8I	GATNNNNATC	2 cut(s)	781, 861
BseAI	TCCGGA	1 cut(s)	1445
BseBI	CCWGG	6 cut(s)	7, 242, 380, 704, 1023, 1964
BseCI	ATCGAT	1 cut(s)	1029
BseGI	GGATG	6 cut(s)	87, 619, 649, 1525, 1999, 2349
BseJI	GATNNNNATC	2 cut(s)	781, 861
BseMI	GCAATG	4 cut(s)	30, 1091, 1506, 2670
BseMII	CTCAG	5 cut(s)	88, 563, 1506, 1880, 2466
BseNI	ACTGG	5 cut(s)	369, 548, 1195, 1429, 1459
BsePI	GCGCGC	1 cut(s)	246
BseRI	GAGGAG	6 cut(s)	103, 131, 781, 1751, 2192, 2646
BseSI	GKGCMC	1 cut(s)	173
BseXI	GCAGC	3 cut(s)	216, 2344, 2428
BseYI	CCCAGC	3 cut(s)	1566, 1891, 2699
Bsh1236I	CGCG	2 cut(s)	231, 248
Bsh1285I	CGRYCG	1 cut(s)	324
BshFI	GGCC	7 cut(s)	171, 213, 509, 587, 1700, 1954, 2682
BshNI	GGYRCC	3 cut(s)	149, 275, 1256
BshTI	ACCGGT	1 cut(s)	1239
BshVI	ATCGAT	1 cut(s)	1029
BsiEI	CGRYCG	1 cut(s)	324
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	3 cut(s)	215, 251, 2372
BsiSI	CCGG	5 cut(s)	153, 461, 588, 1240, 1446
BslFI	GGGAC	3 cut(s)	1376, 1435, 2147
BsmAI	GTCTC	5 cut(s)	150, 187, 225, 585, 986
BsmBI	CGTCTC	2 cut(s)	187, 585
BsmFI	GGGAC	3 cut(s)	1376, 1435, 2147
BsmI	GAATGC	1 cut(s)	2688
BsnI	GGCC	7 cut(s)	171, 213, 509, 587, 1700, 1954, 2682
Bso31I	GGTCTC	2 cut(s)	150, 986
BsoBI	CYCGRG	3 cut(s)	215, 251, 2372
Bsp119I	TTCGAA	1 cut(s)	2334
Bsp120I	GGGCCC	1 cut(s)	169
Bsp1286I	GDGCHC	2 cut(s)	173, 468
Bsp13I	TCCGGA	1 cut(s)	1445
Bsp1407I	TGTACA	1 cut(s)	754
Bsp143I	GATC	4 cut(s)	321, 1318, 1816, 2484
Bsp1720I	GCTNAGC	2 cut(s)	74, 1866
Bsp19I	CCATGG	1 cut(s)	1911
BspACI	CCGC	9 cut(s)	29, 126, 173, 196, 229, 292, 748, 1884, 2360
BspANI	GGCC	7 cut(s)	171, 213, 509, 587, 1700, 1954, 2682
BspCNI	CTCAG	5 cut(s)	87, 564, 1507, 1879, 2465
BspDI	ATCGAT	1 cut(s)	1029
BspEI	TCCGGA	1 cut(s)	1445
BspFNI	CGCG	2 cut(s)	231, 248
BspHI	TCATGA	1 cut(s)	841
BspLI	GGNNCC	7 cut(s)	151, 171, 277, 1258, 1572, 1613, 2486
BspMAI	CTGCAG	3 cut(s)	206, 1255, 2267
BspMI	ACCTGC	3 cut(s)	56, 1244, 1316
BspPI	GGATC	3 cut(s)	1313, 2479, 2492
BspT104I	TTCGAA	1 cut(s)	2334
BspT107I	GGYRCC	3 cut(s)	149, 275, 1256
BspTI	CTTAAG	1 cut(s)	827
BspTNI	GGTCTC	2 cut(s)	150, 986
BsrDI	GCAATG	4 cut(s)	30, 1091, 1506, 2670
BsrFI	RCCGGY	1 cut(s)	1239
BsrGI	TGTACA	1 cut(s)	754
BsrI	ACTGG	5 cut(s)	369, 548, 1195, 1429, 1459
BssAI	RCCGGY	1 cut(s)	1239
BssHII	GCGCGC	1 cut(s)	246
BssMI	GATC	4 cut(s)	321, 1318, 1816, 2484
BssNI	GRCGYC	3 cut(s)	150, 276, 453
BssSI	CACGAG	1 cut(s)	600
BssT1I	CCWWGG	3 cut(s)	348, 1911, 2683
Bst2BI	CACGAG	1 cut(s)	600
Bst2UI	CCWGG	6 cut(s)	7, 242, 380, 704, 1023, 1964
Bst4CI	ACNGT	4 cut(s)	1176, 1236, 1688, 2048
Bst6I	CTCTTC	5 cut(s)	519, 918, 1945, 2623, 2663
BstACI	GRCGYC	3 cut(s)	150, 276, 453
BstAFI	CTTAAG	1 cut(s)	827
BstAUI	TGTACA	1 cut(s)	754
BstBAI	YACGTR	1 cut(s)	1748
BstBI	TTCGAA	1 cut(s)	2334
BstC8I	GCNNGC	8 cut(s)	173, 248, 392, 927, 1545, 1698, 1790, 2661
BstDEI	CTNAG	8 cut(s)	74, 474, 572, 1203, 1515, 1830, 1866, 2452
BstDSI	CCRYGG	4 cut(s)	165, 208, 1911, 2502
BstF5I	GGATG	6 cut(s)	87, 619, 649, 1525, 1999, 2349
BstFNI	CGCG	2 cut(s)	231, 248
BstH2I	RGCGCY	2 cut(s)	153, 279
BstHHI	GCGC	6 cut(s)	125, 152, 248, 250, 278, 2226
BstKTI	GATC	4 cut(s)	324, 1321, 1819, 2487
BstMAI	GTCTC	5 cut(s)	150, 187, 225, 585, 986
BstMBI	GATC	4 cut(s)	321, 1318, 1816, 2484
BstMCI	CGRYCG	1 cut(s)	324
BstMWI	GCNNNNNNNGC	4 cut(s)	204, 210, 935, 1862
BstNI	CCWGG	6 cut(s)	7, 242, 380, 704, 1023, 1964
BstNSI	RCATGY	3 cut(s)	929, 1792, 2129
BstSCI	CCNGG	7 cut(s)	5, 240, 378, 459, 702, 1021, 1962
BstSFI	CTRYAG	6 cut(s)	202, 1232, 1251, 1581, 2263, 2365
BstSLI	GKGCMC	1 cut(s)	173
BstSNI	TACGTA	1 cut(s)	1748
BstUI	CGCG	2 cut(s)	231, 248
BstV1I	GCAGC	3 cut(s)	216, 2344, 2428
BstV2I	GAAGAC	2 cut(s)	2485, 2666
BstX2I	RGATCY	2 cut(s)	1318, 2484
BstYI	RGATCY	2 cut(s)	1318, 2484
Bsu15I	ATCGAT	1 cut(s)	1029
Bsu36I	CCTNAGG	1 cut(s)	1515
BsuI	GTATCC	3 cut(s)	891, 1453, 1918
BsuRI	GGCC	7 cut(s)	171, 213, 509, 587, 1700, 1954, 2682
BsuTUI	ATCGAT	1 cut(s)	1029
BtgI	CCRYGG	4 cut(s)	165, 208, 1911, 2502
BtgZI	GCGATG	1 cut(s)	621
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	6 cut(s)	87, 619, 649, 1525, 1999, 2349
BtsI	GCAGTG	1 cut(s)	1248
BtsIMutI	CAGTG	9 cut(s)	129, 362, 495, 1181, 1188, 1248, 1452, 2053, 2601
BveI	ACCTGC	3 cut(s)	56, 1244, 1316
Cac8I	GCNNGC	8 cut(s)	173, 248, 392, 927, 1545, 1698, 1790, 2661
CciI	TCATGA	1 cut(s)	841
CfoI	GCGC	6 cut(s)	125, 152, 248, 250, 278, 2226
Cfr10I	RCCGGY	1 cut(s)	1239
Cfr13I	GGNCC	3 cut(s)	169, 170, 1836
ClaI	ATCGAT	1 cut(s)	1029
Csp6I	GTAC	7 cut(s)	376, 576, 755, 1237, 1749, 2075, 2419
CspAI	ACCGGT	1 cut(s)	1239
CviQI	GTAC	7 cut(s)	376, 576, 755, 1237, 1749, 2075, 2419
DdeI	CTNAG	8 cut(s)	74, 474, 572, 1203, 1515, 1830, 1866, 2452
DinI	GGCGCC	2 cut(s)	151, 277
DpnI	GATC	4 cut(s)	323, 1320, 1818, 2486
DpnII	GATC	4 cut(s)	321, 1318, 1816, 2484
EaeI	YGGCCR	3 cut(s)	507, 585, 1698
Eam1104I	CTCTTC	5 cut(s)	519, 918, 1945, 2623, 2663
EarI	CTCTTC	5 cut(s)	519, 918, 1945, 2623, 2663
EciI	GGCGGA	1 cut(s)	44
Ecl136II	GAGCTC	1 cut(s)	466
Eco105I	TACGTA	1 cut(s)	1748
Eco130I	CCWWGG	3 cut(s)	348, 1911, 2683
Eco24I	GRGCYC	2 cut(s)	173, 468
Eco31I	GGTCTC	2 cut(s)	150, 986
Eco47I	GGWCC	1 cut(s)	1836
Eco53kI	GAGCTC	1 cut(s)	466
Eco57I	CTGAAG	3 cut(s)	813, 899, 1062
Eco81I	CCTNAGG	1 cut(s)	1515
Eco88I	CYCGRG	3 cut(s)	215, 251, 2372
EcoICRI	GAGCTC	1 cut(s)	466
EcoRII	CCWGG	6 cut(s)	5, 240, 378, 702, 1021, 1962
EcoT14I	CCWWGG	3 cut(s)	348, 1911, 2683
EcoT22I	ATGCAT	2 cut(s)	802, 808
EcoT38I	GRGCYC	2 cut(s)	173, 468
EgeI	GGCGCC	2 cut(s)	151, 277
EheI	GGCGCC	2 cut(s)	151, 277
ErhI	CCWWGG	3 cut(s)	348, 1911, 2683
Esp3I	CGTCTC	2 cut(s)	187, 585
FalI	AAGNNNNNCTT	2 cut(s)	1656, 1688
FaqI	GGGAC	3 cut(s)	1376, 1435, 2147
FauI	CCCGC	2 cut(s)	180, 741
FauNDI	CATATG	2 cut(s)	802, 2446
Fnu4HI	GCNGC	5 cut(s)	126, 205, 293, 2358, 2442
FokI	GGATG	6 cut(s)	74, 626, 656, 1532, 2006, 2356
FriOI	GRGCYC	2 cut(s)	173, 468
Fsp4HI	GCNGC	5 cut(s)	126, 205, 293, 2358, 2442
FspBI	CTAG	2 cut(s)	56, 1070
GlaI	GCGC	6 cut(s)	124, 151, 247, 249, 277, 2225
GluI	GCNGC	5 cut(s)	126, 205, 293, 2358, 2442
GsaI	CCCAGC	3 cut(s)	1570, 1895, 2703
HaeII	RGCGCY	2 cut(s)	153, 279
HaeIII	GGCC	7 cut(s)	171, 213, 509, 587, 1700, 1954, 2682
HapII	CCGG	5 cut(s)	153, 461, 588, 1240, 1446
HhaI	GCGC	6 cut(s)	125, 152, 248, 250, 278, 2226
Hin1I	GRCGYC	3 cut(s)	150, 276, 453
Hin6I	GCGC	6 cut(s)	123, 150, 246, 248, 276, 2224
HinP1I	GCGC	6 cut(s)	123, 150, 246, 248, 276, 2224
HincII	GTYRAC	2 cut(s)	736, 1627
HindII	GTYRAC	2 cut(s)	736, 1627
HindIII	AAGCTT	3 cut(s)	1205, 1545, 1706
HpaII	CCGG	5 cut(s)	153, 461, 588, 1240, 1446
HphI	GGTGA	7 cut(s)	866, 959, 981, 1361, 1898, 2186, 2410
Hpy166II	GTNNAC	5 cut(s)	193, 674, 736, 1627, 1661
Hpy188I	TCNGA	9 cut(s)	326, 448, 867, 1042, 1311, 1723, 1741, 1821, 2455
Hpy8I	GTNNAC	5 cut(s)	193, 674, 736, 1627, 1661
Hpy99I	CGWCG	3 cut(s)	104, 314, 317
HpyCH4III	ACNGT	4 cut(s)	1176, 1236, 1688, 2048
HpyCH4IV	ACGT	4 cut(s)	189, 315, 453, 1747
HpyF10VI	GCNNNNNNNGC	4 cut(s)	204, 210, 935, 1862
HpyF3I	CTNAG	8 cut(s)	74, 474, 572, 1203, 1515, 1830, 1866, 2452
HpySE526I	ACGT	4 cut(s)	189, 315, 453, 1747
Hsp92I	GRCGYC	3 cut(s)	150, 276, 453
HspAI	GCGC	6 cut(s)	123, 150, 246, 248, 276, 2224
KasI	GGCGCC	2 cut(s)	149, 275
Kpn2I	TCCGGA	1 cut(s)	1445
Kzo9I	GATC	4 cut(s)	321, 1318, 1816, 2484
LmnI	GCTCC	4 cut(s)	463, 1516, 1570, 2179
Lsp1109I	GCAGC	3 cut(s)	216, 2344, 2428
LweI	GCATC	6 cut(s)	387, 787, 815, 980, 1288, 1915
MaeI	CTAG	2 cut(s)	56, 1070
MaeII	ACGT	4 cut(s)	189, 315, 453, 1747
MaeIII	GTNAC	2 cut(s)	987, 1402
MalI	GATC	4 cut(s)	323, 1320, 1818, 2486
MboI	GATC	4 cut(s)	321, 1318, 1816, 2484
MflI	RGATCY	2 cut(s)	1318, 2484
MhlI	GDGCHC	2 cut(s)	173, 468
MlsI	TGGCCA	1 cut(s)	509
MluNI	TGGCCA	1 cut(s)	509
Mly113I	GGCGCC	2 cut(s)	150, 276
MlyI	GAGTC	6 cut(s)	227, 778, 890, 1223, 2507, 2680
MmeI	TCCRAC	3 cut(s)	543, 621, 2196
Mox20I	TGGCCA	1 cut(s)	509
Mph1103I	ATGCAT	2 cut(s)	802, 808
MroI	TCCGGA	1 cut(s)	1445
MroXI	GAANNNNTTC	1 cut(s)	1707
MscI	TGGCCA	1 cut(s)	509
MseI	TTAA	8 cut(s)	552, 828, 888, 1299, 1370, 1478, 1677, 1851
MslI	CAYNNNNRTG	2 cut(s)	1284, 1533
Msp20I	TGGCCA	1 cut(s)	509
MspCI	CTTAAG	1 cut(s)	827
MspI	CCGG	5 cut(s)	153, 461, 588, 1240, 1446
MspR9I	CCNGG	7 cut(s)	7, 242, 380, 461, 704, 1023, 1964
Mva1269I	GAATGC	1 cut(s)	2688
MvaI	CCWGG	6 cut(s)	7, 242, 380, 704, 1023, 1964
MvnI	CGCG	2 cut(s)	231, 248
MwoI	GCNNNNNNNGC	4 cut(s)	204, 210, 935, 1862
NarI	GGCGCC	2 cut(s)	150, 276
NciI	CCSGG	1 cut(s)	461
NcoI	CCATGG	1 cut(s)	1911
NdeI	CATATG	2 cut(s)	802, 2446
NdeII	GATC	4 cut(s)	321, 1318, 1816, 2484
NlaIV	GGNNCC	7 cut(s)	151, 171, 277, 1258, 1572, 1613, 2486
NmeAIII	GCCGAG	1 cut(s)	499
NmuCI	GTSAC	2 cut(s)	987, 1402
NsiI	ATGCAT	2 cut(s)	802, 808
NspI	RCATGY	3 cut(s)	929, 1792, 2129
NspV	TTCGAA	1 cut(s)	2334
PaeI	GCATGC	2 cut(s)	929, 1792
PaeR7I	CTCGAG	3 cut(s)	215, 251, 2372
PagI	TCATGA	1 cut(s)	841
PaqCI	CACCTGC	2 cut(s)	1244, 1316
PasI	CCCWGGG	1 cut(s)	703
PauI	GCGCGC	1 cut(s)	246
PcsI	WCGNNNNNNNCGW	4 cut(s)	99, 186, 222, 306
PctI	GAATGC	1 cut(s)	2688
PdmI	GAANNNNTTC	1 cut(s)	1707
PfeI	GAWTC	7 cut(s)	32, 443, 950, 1026, 1736, 2015, 2348
PflMI	CCANNNNNTGG	2 cut(s)	241, 288
PfoI	TCCNGGA	1 cut(s)	1021
PinAI	ACCGGT	1 cut(s)	1239
PkrI	GCNGC	5 cut(s)	127, 206, 294, 2359, 2443
Ple19I	CGATCG	1 cut(s)	324
PleI	GAGTC	6 cut(s)	226, 777, 889, 1222, 2506, 2679
PluTI	GGCGCC	2 cut(s)	153, 279
PpsI	GAGTC	6 cut(s)	226, 777, 889, 1222, 2506, 2679
Ppu21I	YACGTR	1 cut(s)	1748
Psp124BI	GAGCTC	1 cut(s)	468
Psp6I	CCWGG	6 cut(s)	5, 240, 378, 702, 1021, 1962
PspFI	CCCAGC	3 cut(s)	1566, 1891, 2699
PspGI	CCWGG	6 cut(s)	5, 240, 378, 702, 1021, 1962
PspN4I	GGNNCC	7 cut(s)	151, 171, 277, 1258, 1572, 1613, 2486
PspOMI	GGGCCC	1 cut(s)	169
PspPI	GGNCC	3 cut(s)	169, 170, 1836
PspXI	VCTCGAGB	2 cut(s)	215, 2372
PsrI	GAACNNNNNNTAC	2 cut(s)	2036, 2068
PstI	CTGCAG	3 cut(s)	206, 1255, 2267
PsuI	RGATCY	2 cut(s)	1318, 2484
PteI	GCGCGC	1 cut(s)	246
PvuI	CGATCG	1 cut(s)	324
RsaI	GTAC	7 cut(s)	377, 577, 756, 1238, 1750, 2076, 2420
RsaNI	GTAC	7 cut(s)	376, 576, 755, 1237, 1749, 2075, 2419
RseI	CAYNNNNRTG	2 cut(s)	1284, 1533
SacI	GAGCTC	1 cut(s)	468
SaqAI	TTAA	8 cut(s)	552, 828, 888, 1299, 1370, 1478, 1677, 1851
SatI	GCNGC	5 cut(s)	126, 205, 293, 2358, 2442
Sau3AI	GATC	4 cut(s)	321, 1318, 1816, 2484
Sau96I	GGNCC	3 cut(s)	169, 170, 1836
ScaI	AGTACT	1 cut(s)	577
SchI	GAGTC	6 cut(s)	227, 778, 890, 1223, 2507, 2680
ScrFI	CCNGG	7 cut(s)	7, 242, 380, 461, 704, 1023, 1964
SduI	GDGCHC	2 cut(s)	173, 468
SfaNI	GCATC	6 cut(s)	387, 787, 815, 980, 1288, 1915
SfcI	CTRYAG	6 cut(s)	202, 1232, 1251, 1581, 2263, 2365
SfoI	GGCGCC	2 cut(s)	151, 277
Sfr274I	CTCGAG	3 cut(s)	215, 251, 2372
SfuI	TTCGAA	1 cut(s)	2334
SinI	GGWCC	1 cut(s)	1836
SlaI	CTCGAG	3 cut(s)	215, 251, 2372
SmiMI	CAYNNNNRTG	2 cut(s)	1284, 1533
SmlI	CTYRAG	7 cut(s)	215, 251, 827, 983, 1763, 2372, 2422
SmoI	CTYRAG	7 cut(s)	215, 251, 827, 983, 1763, 2372, 2422
SnaBI	TACGTA	1 cut(s)	1748
SphI	GCATGC	2 cut(s)	929, 1792
SsiI	CCGC	9 cut(s)	29, 126, 173, 196, 229, 292, 748, 1884, 2360
SspDI	GGCGCC	2 cut(s)	149, 275
SspI	AATATT	1 cut(s)	1849
SspMI	CTAG	2 cut(s)	56, 1070
SstI	GAGCTC	1 cut(s)	468
StyD4I	CCNGG	7 cut(s)	5, 240, 378, 459, 702, 1021, 1962
StyI	CCWWGG	3 cut(s)	348, 1911, 2683
TaaI	ACNGT	4 cut(s)	1176, 1236, 1688, 2048
TaiI	ACGT	4 cut(s)	192, 318, 456, 1750
TatI	WGTACW	2 cut(s)	575, 754
TauI	GCSGC	2 cut(s)	128, 295
TfiI	GAWTC	7 cut(s)	32, 443, 950, 1026, 1736, 2015, 2348
Tru1I	TTAA	8 cut(s)	552, 828, 888, 1299, 1370, 1478, 1677, 1851
Tru9I	TTAA	8 cut(s)	552, 828, 888, 1299, 1370, 1478, 1677, 1851
TscAI	CASTG	9 cut(s)	136, 369, 495, 1181, 1195, 1255, 1459, 2053, 2601
TseFI	GTSAC	2 cut(s)	987, 1402
TseI	GCWGC	3 cut(s)	204, 2357, 2441
Tsp45I	GTSAC	2 cut(s)	987, 1402
TspGWI	ACGGA	3 cut(s)	154, 2491, 2497
TspRI	CASTG	9 cut(s)	136, 369, 495, 1181, 1195, 1255, 1459, 2053, 2601
Van91I	CCANNNNNTGG	2 cut(s)	241, 288
Vha464I	CTTAAG	1 cut(s)	827
VpaK11BI	GGWCC	1 cut(s)	1836
XapI	RAATTY	3 cut(s)	284, 1432, 1945
XceI	RCATGY	3 cut(s)	929, 1792, 2129
XhoI	CTCGAG	3 cut(s)	215, 251, 2372
XmnI	GAANNNNTTC	1 cut(s)	1707
XspI	CTAG	2 cut(s)	56, 1070
ZraI	GACGTC	1 cut(s)	454
ZrmI	AGTACT	1 cut(s)	577
Zsp2I	ATGCAT	2 cut(s)	802, 808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.