Rorug04G0108700

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000637
Physical Location & Seq
Reverse (-)
16896447 .. 16903926
7480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0108700.1

Sequence Viewer

Length: 2868 bp
ATGGGGGGCCCGGACAAGGCTATCAGCCTTGAGGAGATCAAGAACGAGACTGTTGATCTGGAAAGGATTCCCATTGAGGAAGTGTTTGAGCAGCTGAAATGTTCCAGAGAAGGTCTAAGCGGGGCGGAAGGAGCCCAGAGGCTCGAGATTTTTGGTCCCAACAAGCTAGAAGAGAAGAAGGAAAGCAAATTTCTCAAGTTCCTTGGGTTTATGTGGAATCCTCTATCATGGGTCATGGAAGCTGCAGCCATTATGGCTATTGCTTTGGCCAATGGTGGTGGGAAGCCCCCAGATTGGCAAGATTTTGTGGGTATTGTCTGCTTGTTGGTGATCAACTCCACTATCAGTTTCATTGAAGAAAACAATGCAGGAAATGCAGCTGCTGCACTTATGGCTGGTCTTGCTCCCAAGACTAAGGTGCTTAGAGATGGAAAATGGTCTGAGGAGGATGCTGCCATCCTGGTTCCAGGAGATATCATTAGCATCAAGTTGGGAGACATTGTCCCAGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTAAAGATTGATCAATCTGCCCTTACGGGAGAATCACTTCCAGTGACCAAGCATCCAGGAGATGAAGTTTTCTCTGGTTCAACTTGCAAACAAGGTGAAATCGAAGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCTCATCTTGTAGACAGCACCAACCAAGTTGGACATTTCCAGAAGGTTCTCACTGCTATTGGAAACTTCTGTATCTGCTCCATTGCAGTTGGAATGTTGGTTGAGATTGTAGTCATGTATCCCATTCAGCACAGAAAGTACAGGGACGGAATTGACAATCTCCTTGTACTCTTGATCGGAGGCATTCCCATTGCCATGCCTACCGTCTTGTCTGTGACAATGGCTATTGGATCTCACAGGCTCTCTCAGCAGGGTGCTATCACTAAGAGAATGACTGCCATTGAAGAAATGGCTGGTATGGATGTGCTTTGCAGTGACAAGACAGGAACACTAACTCTTAACAAGCTTAGTGTTGACAAAAACTTGATTGAGGTCTTTTCCAAGGGTACGGAGAAAGACCATGTGGTTCTTCTTGCTGCAAGGGCATCTAGAACCGAAAACCAGGACGCCATTGATGCTGCCATGGTTGGAATGCTTGCTGACCCAAAAGAGGCCCGTGCTGGAATTCGAGAAATTCACTTCTTGCCATTTAATCCTGTGGACAAGAGAACTGCTTTGACTTACATTGATTCTGATGGAAACTGGCACAGAGCAAGCAAAGGTGCACCTGAGCAGATTTTGGACCTCTGCAAGTGCAAAGAGGATTTCAAGAAGAAGGCTTTTGCCATTATTGATAAGTATGCTGAACGTGGTCTTCGGTCTTTGGCTGTTGCTAGACAGGAAGTGCCCGCAAAATCAAAAGAAAGTGAGGGTGGTCCATGGCAGTTGGTTGGGTTGTTGCCTCTTTTTGATCCACCAAGACACGATAGTGCAGAAACTATCCGCCAGGCTCTTAATCTCGGTGTGAATGTTAAGATGATTACTGGTGATCAACTTGCTATCGCAAAGGAAACTGGTCGCAGACTTGGAATGGGAACAAACATGTACCCATCTGCTTCCTTACTTGGTCAACACAAGGATGCAAGCATAGCTGCCCTCCCAATAGAAGAGTTAATCGAGAAGGCTGACGGGTTTGCTGGAGTGTTTCCAGAGCACAAATACGAGATTGTGAAGAAGTTGCAGGAGAGAAAGCACATTTGTGGAATGACAGGAGATGGTGTCAATGATGCCCCTGCATTGAAGAAGGCCGATATTGGAATTGCTGTCGCTGATGCTACAGATGCTGCACGAGGTGCTTCCGACATTGTTCTTACAGAACCCGGATTGAGTGTCATCATCAGTGCAGTGTTGACCAGTAGAGCTATTTTCCAGAGAATGAAGAACTACACAATCTATGCAGTTTCCATCACCATCCGTATTGTGTTTGGTTTCATGTTCATTGCACTCATTTGGAAGTTTGACTTCTCTCCTTTCATGGTTTTGATTATTGCCATATTAAACGATGGAACAATTATGACGATCTCAAAGGATAGAGTTGTGCCATCTCCCCTTCCTGATAGCTGGAAATTGAAAGAGATATTTGCTACTGGGATTGTGCTCGGAGGTTACTTGGCATTGATGACTGTTATATTCTTCTGGTTGATGAAAGAAACTAACTTCTTTTCGAATACATTTGGTGTCAGATCTATAAGAGAGAGTCCTGAGGATCAAATGGCTGCTTTGTACCTACAAGTCAGTATTGTGAGCCAGGCTCTCATTTTTGTCACTCGATCACGAAGCTGGTCCTTTTTGGAACTCCCTGGACTACTGTTGCTCAGTGCTTTTGCCGTCGCCCAGCTGATTGCAACTTTGATAGCAGTATATGCCAACTGGGGATTTGCAAGAATACATGGAGTCGGTTGGGGATGGGCCGGTGTCATCTGGATTTACAGCATTGTCTTCTATTTCCCACTAGACATTATGAAGTTTGCCATCCGTTACATCTTGAGTGGAAAGGCATGGCTCAACATGCTAGAGAACAAGACTGCCTTTACCACCAAGAAAGATTATGGAAAAGAGGAGAGGGAAGCTCAATGGGCTCATGCACAAAGGACCCTTCATGGACTGCAAGCACCAGAAAGTAGTACTCTGTTTAGTGACAAGAGCAGCTACAGAGAGCTGTCTGAGATTGCCGAGCAGGCTAAGAGACGAGCAGAGATGGCAAGACTTCGTGAGCTTACCACACTCAAGGGACATGTCGAGTCAGTGGCGAAGCTGAAGGGCCTGGACCTTGATTCAATCCAGCAGCATTATACAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

955

Amino Acids

104.8

Weight (kDa)

6.28

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 22 - 85 3.2e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 135 - 233 3.7e-31 P-type ATPase actuator domain
Hydrolase PF00702 329 - 606 2.2e-15 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000637)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13771 FvH4_4g13861 FvH4_4g13862 FvH4_4g13890 FvH4_4g13890 FvH4_4g13890 FvH4_4g13901
malus_domestica MD04G1010000.v1.1
prunus_persica Prupe.1G009600_v2.0.a1 Prupe.1G010100_v2.0.a1 Prupe.1G012400_v2.0.a1 Prupe.1G012700_v2.0.a1 Prupe.1G012700_v2.0.a1 Prupe.1G157400_v2.0.a1 Prupe.1G157500_v2.0.a1 Prupe.1G158200_v2.0.a1 Prupe.1G158200_v2.0.a1 Prupe.1G158200_v2.0.a1 Prupe.2G138900_v2.0.a1 Prupe.6G053000_v2.0.a1
pyrus_communis pycom04g00810
rosa_chinensis RchiOBHm_Chr4g0414621 RchiOBHm_Chr4g0414631 RchiOBHm_Chr4g0414641 RchiOBHm_Chr4g0415011 RchiOBHm_Chr4g0415031
rosa_laevigata RLG00000008101 RLG00000008104 RLG00000008138 RLG00000008139 RLG00000008140 RLG00000008354
rosa_multiflora Rmu_co8247483.1_g000001 Rmu_sc0003611.1_g000009 Rmu_sc0003611.1_g000014 Rmu_sc0007034.1_g000033 Rmu_sc0007391.1_g000006 Rmu_sc0011778.1_g000017 Rmu_sc0016172.1_g000002
rosa_roxburghii Rroxscaffold_5G00358400 Rroxscaffold_5G00358430 Rroxscaffold_5G00358610 Rroxscaffold_5G00358740 Rroxscaffold_5G00358750 Rroxscaffold_5G00358770
rosa_rugosa Rorug04G0108700 Rorug04G0128400 Rorug04G0128500 Rorug04G0128900 Rorug04G0129000 Rorug04G0129100 Rorug04G0131400 Rorug04G0131500 Rorug04G0131600 Rorug04G0131800 Rorug04G0131900
rosa_samantha Rh4AG187100 Rh4AG187200 Rh4AG190700 Rh4AG191200 Rh4BG185800 Rh4BG186100 Rh4BG188700 Rh4BG188900 Rh4BG189300 Rh4CG199200 Rh4CG199700 Rh4CG201900 Rh4CG202100 Rh4DG185400 Rh4DG185700 Rh4DG189300 Rh4DG189700 Rh6CG237600
rosa_wichuraiana Rw4G015970 Rw4G016000 Rw4G016240 Rw4G016260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 699
AciI CCGC 4 cut(s) 120, 125, 1416, 1510
AclWI GGATC 4 cut(s) 527, 925, 1472, 2280
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 3 cut(s) 188, 1191, 1200
AcuI CTGAAG 1 cut(s) 2843
AcyI GRCGYC 1 cut(s) 1134
AdeI CACNNNGTG 1 cut(s) 1859
AfaI GTAC 6 cut(s) 827, 855, 1075, 1613, 2291, 2692
AfiI CCNNNNNNNGG 4 cut(s) 16, 294, 678, 1177
AflIII ACRYGT 2 cut(s) 1608, 2800
AgsI TTSAA 7 cut(s) 356, 618, 971, 1336, 1807, 2137, 2844
AjnI CCWGG 8 cut(s) 459, 466, 592, 1128, 1512, 2313, 2365, 2829
AleI CACNNNNGTG 2 cut(s) 1494, 1764
Alw21I GWGCWC 3 cut(s) 1294, 1722, 2166
Alw26I GTCTC 3 cut(s) 41, 489, 2746
Alw44I GTGCAC 1 cut(s) 1290
AlwI GGATC 4 cut(s) 527, 925, 1472, 2280
AlwNI CAGNNNCTG 2 cut(s) 383, 1850
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 6 cut(s) 7, 267, 1179, 1812, 2475, 2827
ApaI GGGCCC 1 cut(s) 11
ApaLI GTGCAC 1 cut(s) 1290
ApoI RAATTY 3 cut(s) 188, 1191, 1200
ArsI GACNNNNNNTTYG 2 cut(s) 633, 665
Asp700I GAANNNNTTC 2 cut(s) 66, 573
AsuC2I CCSGG 2 cut(s) 11, 1887
AsuHPI GGTGA 5 cut(s) 340, 542, 644, 1565, 1966
AsuII TTCGAA 1 cut(s) 2231
AvaI CYCGRG 1 cut(s) 143
AvaII GGWCC 6 cut(s) 155, 1309, 1442, 2349, 2658, 2833
AxyI CCTNAGG 1 cut(s) 2268
BaeGI GKGCMC 3 cut(s) 11, 1294, 1416
BaeI ACNNNNGTAYC 2 cut(s) 742, 775
BalI TGGCCA 1 cut(s) 269
BanII GRGCYC 3 cut(s) 11, 136, 2647
BauI CACGAG 1 cut(s) 1854
BbsI GAAGAC 3 cut(s) 512, 1373, 2497
Bbv12I GWGCWC 3 cut(s) 1294, 1722, 2166
BceAI ACGGC 1 cut(s) 2378
BciT130I CCWGG 8 cut(s) 461, 468, 594, 1130, 1514, 2315, 2367, 2831
BciVI GTATCC 1 cut(s) 816
BclI TGATCA 3 cut(s) 330, 547, 1555
BcnI CCSGG 2 cut(s) 11, 1887
BcoDI GTCTC 3 cut(s) 41, 489, 2746
BfaI CTAG 5 cut(s) 167, 1116, 1401, 2519, 2579
BfmI CTRYAG 3 cut(s) 243, 1842, 2716
BfuI GTATCC 1 cut(s) 816
BglI GCCNNNNNGGC 2 cut(s) 254, 2744
BglII AGATCT 1 cut(s) 2249
BmcAI AGTACT 1 cut(s) 2692
Bme18I GGWCC 6 cut(s) 155, 1309, 1442, 2349, 2658, 2833
BmeT110I CYCGRG 1 cut(s) 143
BmiI GGNNCC 6 cut(s) 8, 9, 133, 157, 465, 2660
BmrI ACTGGG 2 cut(s) 2163, 2446
BmuI ACTGGG 2 cut(s) 2163, 2446
BpiI GAAGAC 3 cut(s) 512, 1373, 2497
BplI GAGNNNNNCTC 4 cut(s) 2302, 2334, 2620, 2652
BpmI CTGGAG 1 cut(s) 1725
Bpu10I CCTNAGC 1 cut(s) 1296
Bpu14I TTCGAA 1 cut(s) 2231
BpuEI CTTGAG 5 cut(s) 50, 179, 545, 2572, 2777
BpuMI CCSGG 2 cut(s) 11, 1887
BsaHI GRCGYC 1 cut(s) 1134
BsaJI CCNNGG 5 cut(s) 202, 1068, 1149, 1445, 2365
BsaXI ACNNNNNCTCC 6 cut(s) 486, 516, 588, 618, 1770, 1800
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 294, 678, 1177
Bse118I RCCGGY 1 cut(s) 2477
Bse1I ACTGG 8 cut(s) 578, 664, 1274, 1555, 1585, 1920, 2158, 2441
Bse21I CCTNAGG 1 cut(s) 2268
Bse3DI GCAATG 4 cut(s) 651, 768, 876, 2004
BseBI CCWGG 8 cut(s) 461, 468, 594, 1130, 1514, 2315, 2367, 2831
BseDI CCNNGG 5 cut(s) 202, 1068, 1149, 1445, 2365
BseGI GGATG 8 cut(s) 454, 456, 589, 994, 1651, 1977, 2477, 2538
BseLI CCNNNNNNNGG 4 cut(s) 16, 294, 678, 1177
BseMI GCAATG 4 cut(s) 651, 768, 876, 2004
BseMII CTCAG 6 cut(s) 432, 947, 1287, 2259, 2395, 2721
BseNI ACTGG 8 cut(s) 578, 664, 1274, 1555, 1585, 1920, 2158, 2441
BseRI GAGGAG 3 cut(s) 47, 458, 2639
BseSI GKGCMC 3 cut(s) 11, 1294, 1416
BseYI CCCAGC 2 cut(s) 505, 2400
BsgI GTGCAG 4 cut(s) 369, 1518, 1836, 1929
BshFI GGCC 6 cut(s) 9, 269, 1181, 1814, 2477, 2829
BsiHKAI GWGCWC 3 cut(s) 1294, 1722, 2166
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 3 cut(s) 11, 1887, 2478
BslFI GGGAC 4 cut(s) 141, 488, 845, 2811
BslI CCNNNNNNNGG 4 cut(s) 16, 294, 678, 1177
BsmAI GTCTC 3 cut(s) 41, 489, 2746
BsmBI CGTCTC 1 cut(s) 2746
BsmFI GGGAC 4 cut(s) 141, 488, 845, 2811
BsmI GAATGC 2 cut(s) 870, 1164
BsnI GGCC 6 cut(s) 9, 269, 1181, 1814, 2477, 2829
BsoBI CYCGRG 1 cut(s) 143
Bsp119I TTCGAA 1 cut(s) 2231
Bsp120I GGGCCC 1 cut(s) 7
Bsp1286I GDGCHC 7 cut(s) 11, 136, 1294, 1416, 1722, 2166, 2647
Bsp19I CCATGG 2 cut(s) 1149, 1445
BspACI CCGC 4 cut(s) 120, 125, 1416, 1510
BspANI GGCC 6 cut(s) 9, 269, 1181, 1814, 2477, 2829
BspCNI CTCAG 6 cut(s) 433, 946, 1288, 2260, 2394, 2722
BspLI GGNNCC 6 cut(s) 8, 9, 133, 157, 465, 2660
BspMAI CTGCAG 1 cut(s) 247
BspPI GGATC 4 cut(s) 527, 925, 1472, 2280
BspT104I TTCGAA 1 cut(s) 2231
BsrDI GCAATG 4 cut(s) 651, 768, 876, 2004
BsrFI RCCGGY 1 cut(s) 2477
BsrI ACTGG 8 cut(s) 578, 664, 1274, 1555, 1585, 1920, 2158, 2441
BssAI RCCGGY 1 cut(s) 2477
BssECI CCNNGG 5 cut(s) 202, 1068, 1149, 1445, 2365
BssNI GRCGYC 1 cut(s) 1134
BssSI CACGAG 1 cut(s) 1854
BssT1I CCWWGG 4 cut(s) 202, 1068, 1149, 1445
Bst2BI CACGAG 1 cut(s) 1854
Bst2UI CCWGG 8 cut(s) 461, 468, 594, 1130, 1514, 2315, 2367, 2831
Bst4CI ACNGT 5 cut(s) 52, 892, 2191, 2376, 2863
Bst6I CTCTTC 2 cut(s) 165, 1668
BstACI GRCGYC 1 cut(s) 1134
BstAPI GCANNNNNTGC 4 cut(s) 374, 383, 1859, 2429
BstBI TTCGAA 1 cut(s) 2231
BstC8I GCNNGC 6 cut(s) 1164, 1282, 1416, 1651, 2676, 2745
BstDSI CCRYGG 2 cut(s) 1149, 1445
BstF5I GGATG 8 cut(s) 454, 456, 589, 994, 1651, 1977, 2477, 2538
BstMAI GTCTC 3 cut(s) 41, 489, 2746
BstNI CCWGG 8 cut(s) 461, 468, 594, 1130, 1514, 2315, 2367, 2831
BstNSI RCATGY 3 cut(s) 1612, 2578, 2804
BstSFI CTRYAG 3 cut(s) 243, 1842, 2716
BstSLI GKGCMC 3 cut(s) 11, 1294, 1416
BstV2I GAAGAC 3 cut(s) 512, 1373, 2497
BstX2I RGATCY 2 cut(s) 917, 2249
BstYI RGATCY 2 cut(s) 917, 2249
Bsu36I CCTNAGG 1 cut(s) 2268
BsuI GTATCC 1 cut(s) 816
BsuRI GGCC 6 cut(s) 9, 269, 1181, 1814, 2477, 2829
BtgI CCRYGG 2 cut(s) 1149, 1445
BtsCI GGATG 8 cut(s) 454, 456, 589, 994, 1651, 1977, 2477, 2538
BtsI GCAGTG 3 cut(s) 738, 1006, 1917
BtsIMutI CAGTG 9 cut(s) 585, 657, 738, 1006, 1912, 1917, 2389, 2817, 2868
Cac8I GCNNGC 6 cut(s) 1164, 1282, 1416, 1651, 2676, 2745
CaiI CAGNNNCTG 2 cut(s) 383, 1850
Cfr10I RCCGGY 1 cut(s) 2477
CseI GACGC 1 cut(s) 1142
Csp6I GTAC 6 cut(s) 826, 854, 1074, 1612, 2290, 2691
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviQI GTAC 6 cut(s) 826, 854, 1074, 1612, 2290, 2691
DraI TTTAAA 1 cut(s) 540
DraIII CACNNNGTG 1 cut(s) 1859
EaeI YGGCCR 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 165, 1668
EarI CTCTTC 2 cut(s) 165, 1668
EciI GGCGGA 2 cut(s) 140, 1499
Eco130I CCWWGG 4 cut(s) 202, 1068, 1149, 1445
Eco24I GRGCYC 3 cut(s) 11, 136, 2647
Eco32I GATATC 1 cut(s) 475
Eco47I GGWCC 6 cut(s) 155, 1309, 1442, 2349, 2658, 2833
Eco57I CTGAAG 1 cut(s) 2843
Eco81I CCTNAGG 1 cut(s) 2268
Eco88I CYCGRG 1 cut(s) 143
EcoO109I RGGNCCY 3 cut(s) 7, 2658, 2827
EcoRI GAATTC 1 cut(s) 1191
EcoRII CCWGG 8 cut(s) 459, 466, 592, 1128, 1512, 2313, 2365, 2829
EcoRV GATATC 1 cut(s) 475
EcoT14I CCWWGG 4 cut(s) 202, 1068, 1149, 1445
EcoT38I GRGCYC 3 cut(s) 11, 136, 2647
ErhI CCWWGG 4 cut(s) 202, 1068, 1149, 1445
Esp3I CGTCTC 1 cut(s) 2746
FalI AAGNNNNNCTT 4 cut(s) 2012, 2044, 2579, 2611
FaqI GGGAC 4 cut(s) 141, 488, 845, 2811
FauI CCCGC 2 cut(s) 113, 1423
FbaI TGATCA 3 cut(s) 330, 547, 1555
FblI GTMKAC 1 cut(s) 699
FokI GGATG 8 cut(s) 443, 461, 576, 1001, 1658, 1964, 2484, 2525
FriOI GRGCYC 3 cut(s) 11, 136, 2647
FspBI CTAG 5 cut(s) 167, 1116, 1401, 2519, 2579
GsaI CCCAGC 2 cut(s) 509, 2404
GsuI CTGGAG 1 cut(s) 1725
HaeIII GGCC 6 cut(s) 9, 269, 1181, 1814, 2477, 2829
HapII CCGG 3 cut(s) 11, 1887, 2478
HgaI GACGC 1 cut(s) 1142
Hin1I GRCGYC 1 cut(s) 1134
HincII GTYRAC 3 cut(s) 1042, 1637, 1917
HindII GTYRAC 3 cut(s) 1042, 1637, 1917
HindIII AAGCTT 1 cut(s) 1031
HinfI GANTC 8 cut(s) 67, 217, 569, 1256, 2263, 2460, 2807, 2840
HpaII CCGG 3 cut(s) 11, 1887, 2478
HphI GGTGA 5 cut(s) 340, 542, 644, 1565, 1966
Hpy166II GTNNAC 7 cut(s) 667, 700, 1042, 1228, 1292, 1637, 1917
Hpy188I TCNGA 7 cut(s) 442, 866, 1261, 1867, 2168, 2249, 2731
Hpy8I GTNNAC 7 cut(s) 667, 700, 1042, 1228, 1292, 1637, 1917
Hpy99I CGWCG 1 cut(s) 2399
HpyCH4III ACNGT 5 cut(s) 52, 892, 2191, 2376, 2863
HpyCH4IV ACGT 1 cut(s) 1375
HpySE526I ACGT 1 cut(s) 1375
Hsp92I GRCGYC 1 cut(s) 1134
Ksp22I TGATCA 3 cut(s) 330, 547, 1555
LmnI GCTCC 3 cut(s) 131, 409, 770
MaeI CTAG 5 cut(s) 167, 1116, 1401, 2519, 2579
MaeII ACGT 1 cut(s) 1375
MaeIII GTNAC 7 cut(s) 580, 901, 1001, 2171, 2329, 2543, 2702
MflI RGATCY 2 cut(s) 917, 2249
MhlI GDGCHC 7 cut(s) 11, 136, 1294, 1416, 1722, 2166, 2647
MlsI TGGCCA 1 cut(s) 269
MluCI AATT 7 cut(s) 188, 837, 1191, 1200, 1824, 2076, 2132
MluNI TGGCCA 1 cut(s) 269
MlyI GAGTC 3 cut(s) 2272, 2469, 2816
MmeI TCCRAC 4 cut(s) 697, 757, 1135, 1890
Mox20I TGGCCA 1 cut(s) 269
MroXI GAANNNNTTC 2 cut(s) 66, 573
MscI TGGCCA 1 cut(s) 269
MseI TTAA 7 cut(s) 539, 1026, 1218, 1521, 1539, 1679, 2063
MslI CAYNNNNRTG 4 cut(s) 881, 1494, 1644, 1764
Msp20I TGGCCA 1 cut(s) 269
MspA1I CMGCKG 4 cut(s) 94, 380, 509, 2404
MspI CCGG 3 cut(s) 11, 1887, 2478
Mva1269I GAATGC 2 cut(s) 870, 1164
MvaI CCWGG 8 cut(s) 461, 468, 594, 1130, 1514, 2315, 2367, 2831
NciI CCSGG 2 cut(s) 11, 1887
NcoI CCATGG 2 cut(s) 1149, 1445
NlaIV GGNNCC 6 cut(s) 8, 9, 133, 157, 465, 2660
NmeAIII GCCGAG 1 cut(s) 2764
NmuCI GTSAC 5 cut(s) 580, 901, 1001, 2329, 2702
NspI RCATGY 3 cut(s) 1612, 2578, 2804
NspV TTCGAA 1 cut(s) 2231
OliI CACNNNNGTG 2 cut(s) 1494, 1764
PaeR7I CTCGAG 1 cut(s) 143
PciI ACATGT 2 cut(s) 1608, 2800
PctI GAATGC 2 cut(s) 870, 1164
PdmI GAANNNNTTC 2 cut(s) 66, 573
PfeI GAWTC 5 cut(s) 67, 217, 569, 1256, 2840
PflFI GACNNNGTC 1 cut(s) 500
PfoI TCCNGGA 2 cut(s) 466, 592
PleI GAGTC 3 cut(s) 2271, 2468, 2815
PpsI GAGTC 3 cut(s) 2271, 2468, 2815
PpuMI RGGWCCY 1 cut(s) 2658
PscI ACATGT 2 cut(s) 1608, 2800
Psp5II RGGWCCY 1 cut(s) 2658
Psp6I CCWGG 8 cut(s) 459, 466, 592, 1128, 1512, 2313, 2365, 2829
PspFI CCCAGC 2 cut(s) 505, 2400
PspGI CCWGG 8 cut(s) 459, 466, 592, 1128, 1512, 2313, 2365, 2829
PspN4I GGNNCC 6 cut(s) 8, 9, 133, 157, 465, 2660
PspOMI GGGCCC 1 cut(s) 7
PspPPI RGGWCCY 1 cut(s) 2658
PstI CTGCAG 1 cut(s) 247
PstNI CAGNNNCTG 2 cut(s) 383, 1850
PsuI RGATCY 2 cut(s) 917, 2249
PsyI GACNNNGTC 1 cut(s) 500
PvuII CAGCTG 4 cut(s) 94, 380, 509, 2404
RsaI GTAC 6 cut(s) 827, 855, 1075, 1613, 2291, 2692
RsaNI GTAC 6 cut(s) 826, 854, 1074, 1612, 2290, 2691
RseI CAYNNNNRTG 4 cut(s) 881, 1494, 1644, 1764
SaqAI TTAA 7 cut(s) 539, 1026, 1218, 1521, 1539, 1679, 2063
ScaI AGTACT 1 cut(s) 2692
SchI GAGTC 3 cut(s) 2272, 2469, 2816
SduI GDGCHC 7 cut(s) 11, 136, 1294, 1416, 1722, 2166, 2647
SfcI CTRYAG 3 cut(s) 243, 1842, 2716
Sfr274I CTCGAG 1 cut(s) 143
SfuI TTCGAA 1 cut(s) 2231
SinI GGWCC 6 cut(s) 155, 1309, 1442, 2349, 2658, 2833
SlaI CTCGAG 1 cut(s) 143
SmiMI CAYNNNNRTG 4 cut(s) 881, 1494, 1644, 1764
SmlI CTYRAG 6 cut(s) 29, 143, 194, 524, 2551, 2792
SmoI CTYRAG 6 cut(s) 29, 143, 194, 524, 2551, 2792
Sse9I AATT 7 cut(s) 188, 837, 1191, 1200, 1824, 2076, 2132
SsiI CCGC 4 cut(s) 120, 125, 1416, 1510
SspMI CTAG 5 cut(s) 167, 1116, 1401, 2519, 2579
StyI CCWWGG 4 cut(s) 202, 1068, 1149, 1445
TaaI ACNGT 5 cut(s) 52, 892, 2191, 2376, 2863
TaiI ACGT 1 cut(s) 1378
TaqI TCGA 7 cut(s) 144, 639, 1195, 1683, 2231, 2335, 2805
TaqII GACCGA 1 cut(s) 1374
TasI AATT 7 cut(s) 188, 837, 1191, 1200, 1824, 2076, 2132
TatI WGTACW 3 cut(s) 825, 853, 2690
TfiI GAWTC 5 cut(s) 67, 217, 569, 1256, 2840
Tru1I TTAA 7 cut(s) 539, 1026, 1218, 1521, 1539, 1679, 2063
Tru9I TTAA 7 cut(s) 539, 1026, 1218, 1521, 1539, 1679, 2063
TscAI CASTG 9 cut(s) 585, 664, 745, 1006, 1912, 1917, 2389, 2817, 2868
TseFI GTSAC 5 cut(s) 580, 901, 1001, 2329, 2702
Tsp45I GTSAC 5 cut(s) 580, 901, 1001, 2329, 2702
TspDTI ATGAA 9 cut(s) 340, 615, 1958, 1987, 1993, 2029, 2225, 2543, 2654
TspGWI ACGGA 4 cut(s) 849, 1091, 1970, 2531
TspRI CASTG 9 cut(s) 585, 664, 745, 1006, 1912, 1917, 2389, 2817, 2868
Tth111I GACNNNGTC 1 cut(s) 500
VneI GTGCAC 1 cut(s) 1290
VpaK11BI GGWCC 6 cut(s) 155, 1309, 1442, 2349, 2658, 2833
XapI RAATTY 3 cut(s) 188, 1191, 1200
XbaI TCTAGA 1 cut(s) 1115
XceI RCATGY 3 cut(s) 1612, 2578, 2804
XcmI CCANNNNNNNNNTGG 2 cut(s) 674, 973
XhoI CTCGAG 1 cut(s) 143
XmiI GTMKAC 1 cut(s) 699
XmnI GAANNNNTTC 2 cut(s) 66, 573
XspI CTAG 5 cut(s) 167, 1116, 1401, 2519, 2579
ZrmI AGTACT 1 cut(s) 2692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.