Rorug04G0119200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000944
Physical Location & Seq
Forward (+)
18881909 .. 18887032
5124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0119200.1

Sequence Viewer

Length: 1638 bp
ATGGAGAACAAACAAGACAGTCACGAATTCATTTTCCGTTCAAAGCTGCCGGACATTTACATCCCGAACCACCTCCCTCTCCACACCTACTGCTTCGAGAACATCTCCCAATTCCGTGACCGTCCCTGCATGATCAACGGCAACACCGGCGAGACCTTCACCTATGCCGACGTCGAGCTCACCTCCCGCAGAGTCGCCGCAGGTCTCGACAAGCTCGGCATTCATCAGGGCGACGTCGTCATGCTCCTCCTCCAAAACTGCCCCGAATTCGCCTTCGCATTCCTCGGCGCCTCTTACGTCGGAGGCATCATCACTACGGCGAACCCCTTCTACACTCCTGCCGAGGTCGCCAAGCAAGCCACTGCCTCCAACGCCAAGCTGATCATAACTCAAGCGGCCTACGTGGACAAGGTGAAGGACTTTGCCAAACTCAACAACGTTAAACTCATGTGCGTGGATGAGACTTCGTCGTTATCAGAGGATGTGTTGCATTTCTCCCAGCTGACGTCGGCTGACGAGAGCGAAACCCCGGCGGTGAAAATCAACCCGGACGACGTGGTGGCGCTGCCCTACTCGTCGGGAACGACGGGGCTACCGAAAGGAGTGATGCTGACGCACAAGGGGTTGGTGACGAGCGTGGCGCAGCAGGTCGACGGCGAAAACCCAAACCTCTACTTTCACAAGGAGGACGTGATCCTCTGCGTGCTGCCGTTGTTCCACATCTACTCCCTCAACTCGGTGTTCCTCTGCGGACTCCGAGTCGGAGCGACGATCCTGATCATGCAGAAGTTTGAGATCAACAAGTTGTTGGAGTTGGTGGAAAAGGAAAAGGTGACTATTGCGCCGTTTGTGCCTCCGATTGTTTTGAACATCGCCAAGAGTCCGGACCTGCACCGGTACGACTTGTCGTCGATTCGGATGGTGATGTCCGGGGCGGCTCCGATGGGGAAGGAGCTCGAGGACACTGTCAGGGCTAAACTGCCCAATGCCAAACTCGGACAGGGTTATGGGATGACTGAGGCTGGACCAGTTCTATCCATGTGCTTGGCATTTGCAAAAGAACCCTATGTGATAAAATCAGGTGCGTGCGGGACCGTCGTAAGAAATGCTGAGATGAAGATCATCGACCCCGACAGCAATGAATCCCTTCCCCGAAACCAATCCGGAGAGATTTGCATCCGAGGTAGCCAAATCATGAAAGGATACCTGAATGACCCTGAGGCGACTGAGAGGACCATAGACAAAGAAGGATGGTTGCACACAGGTGATATAGGGTACATCGATGACGACGATGAGCTCTTCATCGTTGACCGTTTAAAAGAACTCATTAAATACAAAGGTTTCCAAGTCGCACCGGCTGAGCTCGAAGCCATGTTGATCTCCCATCCCAACCTCTCCGATGCTGCTGTTGTGCCGATGAAGGATGAGGCTGCAGGAGAGGTTCCTATTGCATTTGTTGTAAGATCAAACGGTTCCAAGATATCTGAGGATGACATTAAGCAATACATATCAAAACAGGTGGTGTTCTACAAGAGAATAAGTAGGGTTTTCTTCACAGACAAAATCCCAAAAGCTCCGTCTGGCAAAATATTGAGGAAAGACTTGAGAGCACGGCTGGCTGCAGGTCTACCCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

545

Amino Acids

60.07

Weight (kDa)

5.68

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 33 - 403 1.3e-100 AMP-binding enzyme
AMP-binding_C PF13193 454 - 529 1.3e-16 AMP-binding enzyme C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 174, 237, 509
Acc36I ACCTGC 4 cut(s) 191, 637, 897, 1613
AccB1I GGYRCC 1 cut(s) 287
AccI GTMKAC 2 cut(s) 651, 1627
AccIII TCCGGA 2 cut(s) 883, 1163
AciI CCGC 7 cut(s) 187, 198, 395, 533, 750, 935, 1089
AclI AACGTT 1 cut(s) 438
AclWI GGATC 2 cut(s) 688, 766
AcsI RAATTY 2 cut(s) 26, 266
AcyI GRCGYC 4 cut(s) 171, 234, 288, 506
AfaI GTAC 2 cut(s) 899, 1277
AfiI CCNNNNNNNGG 1 cut(s) 736
AgeI ACCGGT 1 cut(s) 894
AgsI TTSAA 2 cut(s) 42, 868
AhdI GACNNNNNGTC 2 cut(s) 758, 907
AjiI CACGTC 2 cut(s) 556, 691
AleI CACNNNNGTG 1 cut(s) 1263
AluBI AGCT 9 cut(s) 46, 178, 214, 379, 502, 955, 1297, 1363, 1574
AluI AGCT 9 cut(s) 46, 178, 214, 379, 502, 955, 1297, 1363, 1574
Alw21I GWGCWC 5 cut(s) 180, 957, 1299, 1365, 1612
Alw26I GTCTC 3 cut(s) 146, 209, 455
AlwI GGATC 2 cut(s) 688, 766
Ama87I CYCGRG 1 cut(s) 956
Aor13HI TCCGGA 2 cut(s) 883, 1163
AoxI GGCC 1 cut(s) 396
ApeKI GCWGC 7 cut(s) 46, 565, 643, 706, 1403, 1430, 1619
ApoI RAATTY 2 cut(s) 26, 266
ArsI GACNNNNNNTTYG 2 cut(s) 1562, 1594
AsiGI ACCGGT 1 cut(s) 894
Asp700I GAANNNNTTC 2 cut(s) 326, 1146
AspLEI GCGC 4 cut(s) 290, 565, 643, 844
AspS9I GGNCC 4 cut(s) 886, 1025, 1092, 1233
AsuC2I CCSGG 3 cut(s) 530, 548, 931
AsuHPI GGTGA 8 cut(s) 151, 172, 424, 547, 640, 844, 934, 1277
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 4 cut(s) 886, 1025, 1092, 1233
AxyI CCTNAGG 1 cut(s) 1218
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 4 cut(s) 180, 957, 1299, 1365
Bbv12I GWGCWC 5 cut(s) 180, 957, 1299, 1365, 1612
BbvI GCAGC 7 cut(s) 33, 552, 655, 693, 1390, 1417, 1606
BccI CCATC 4 cut(s) 913, 937, 1245, 1392
BceAI ACGGC 6 cut(s) 154, 333, 670, 694, 829, 1628
BciVI GTATCC 1 cut(s) 1196
BclI TGATCA 3 cut(s) 132, 381, 777
BcnI CCSGG 3 cut(s) 530, 548, 931
BcoDI GTCTC 3 cut(s) 146, 209, 455
BfaI CTAG 1 cut(s) 1636
BfmI CTRYAG 2 cut(s) 1431, 1620
BfoI RGCGCY 2 cut(s) 291, 566
BfuAI ACCTGC 4 cut(s) 191, 637, 897, 1613
BfuI GTATCC 1 cut(s) 1196
BlpI GCTNAGC 1 cut(s) 1359
Bme1390I CCNGG 3 cut(s) 530, 548, 931
Bme18I GGWCC 4 cut(s) 886, 1025, 1092, 1233
BmeRI GACNNNNNGTC 2 cut(s) 758, 907
BmeT110I CYCGRG 1 cut(s) 956
BmgBI CACGTC 2 cut(s) 556, 691
BmgT120I GGNCC 4 cut(s) 886, 1025, 1092, 1233
BmiI GGNNCC 5 cut(s) 289, 939, 1093, 1443, 1474
BmrFI CCNGG 3 cut(s) 530, 548, 931
BmsI GCATC 4 cut(s) 315, 597, 1185, 1390
BplI GAGNNNNNCTC 4 cut(s) 89, 121, 167, 199
Bpu1102I GCTNAGC 1 cut(s) 1359
BpuEI CTTGAG 2 cut(s) 375, 1624
BpuMI CCSGG 3 cut(s) 530, 548, 931
Bsa29I ATCGAT 1 cut(s) 1281
BsaAI YACGTR 1 cut(s) 403
BsaBI GATNNNNATC 3 cut(s) 776, 1118, 1175
BsaHI GRCGYC 4 cut(s) 171, 234, 288, 506
BsaI GGTCTC 2 cut(s) 146, 209
BsaJI CCNNGG 5 cut(s) 283, 342, 528, 930, 1180
BsaWI WCCGGW 3 cut(s) 883, 894, 1163
BsaXI ACNNNNNCTCC 2 cut(s) 710, 740
Bsc4I CCNNNNNNNGG 1 cut(s) 736
Bse118I RCCGGY 3 cut(s) 146, 894, 1354
Bse1I ACTGG 1 cut(s) 1028
Bse21I CCTNAGG 1 cut(s) 1218
Bse3DI GCAATG 1 cut(s) 1144
Bse8I GATNNNNATC 3 cut(s) 776, 1118, 1175
BseAI TCCGGA 2 cut(s) 883, 1163
BseCI ATCGAT 1 cut(s) 1281
BseDI CCNNGG 5 cut(s) 283, 342, 528, 930, 1180
BseJI GATNNNNATC 3 cut(s) 776, 1118, 1175
BseLI CCNNNNNNNGG 1 cut(s) 736
BseMI GCAATG 1 cut(s) 1144
BseMII CTCAG 6 cut(s) 1008, 1101, 1209, 1218, 1350, 1476
BseNI ACTGG 1 cut(s) 1028
BseRI GAGGAG 2 cut(s) 236, 239
BseXI GCAGC 7 cut(s) 33, 552, 655, 693, 1390, 1417, 1606
BseYI CCCAGC 1 cut(s) 498
BsgI GTGCAG 1 cut(s) 875
BshFI GGCC 1 cut(s) 398
BshNI GGYRCC 1 cut(s) 287
BshTI ACCGGT 1 cut(s) 894
BshVI ATCGAT 1 cut(s) 1281
BsiHKAI GWGCWC 5 cut(s) 180, 957, 1299, 1365, 1612
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 9 cut(s) 50, 147, 530, 548, 884, 895, 930, 1164, 1355
BslFI GGGAC 2 cut(s) 108, 1105
BslI CCNNNNNNNGG 1 cut(s) 736
BsmAI GTCTC 3 cut(s) 146, 209, 455
BsmFI GGGAC 2 cut(s) 108, 1105
BsmI GAATGC 2 cut(s) 219, 278
BsnI GGCC 1 cut(s) 398
Bso31I GGTCTC 2 cut(s) 146, 209
BsoBI CYCGRG 1 cut(s) 956
Bsp1286I GDGCHC 5 cut(s) 180, 957, 1299, 1365, 1612
Bsp13I TCCGGA 2 cut(s) 883, 1163
Bsp143I GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
Bsp1720I GCTNAGC 1 cut(s) 1359
BspACI CCGC 7 cut(s) 187, 198, 395, 533, 750, 935, 1089
BspANI GGCC 1 cut(s) 398
BspCNI CTCAG 6 cut(s) 1009, 1102, 1210, 1219, 1351, 1477
BspDI ATCGAT 1 cut(s) 1281
BspEI TCCGGA 2 cut(s) 883, 1163
BspHI TCATGA 1 cut(s) 1194
BspLI GGNNCC 5 cut(s) 289, 939, 1093, 1443, 1474
BspMAI CTGCAG 2 cut(s) 1435, 1624
BspMI ACCTGC 4 cut(s) 191, 637, 897, 1613
BspPI GGATC 2 cut(s) 688, 766
BspQI GCTCTTC 1 cut(s) 1304
BspT107I GGYRCC 1 cut(s) 287
BspTNI GGTCTC 2 cut(s) 146, 209
BsrDI GCAATG 1 cut(s) 1144
BsrFI RCCGGY 3 cut(s) 146, 894, 1354
BsrI ACTGG 1 cut(s) 1028
BssAI RCCGGY 3 cut(s) 146, 894, 1354
BssECI CCNNGG 5 cut(s) 283, 342, 528, 930, 1180
BssMI GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
BssNI GRCGYC 4 cut(s) 171, 234, 288, 506
Bst4CI ACNGT 6 cut(s) 20, 122, 967, 1096, 1313, 1472
Bst6I CTCTTC 1 cut(s) 1304
BstACI GRCGYC 4 cut(s) 171, 234, 288, 506
BstBAI YACGTR 1 cut(s) 403
BstC8I GCNNGC 4 cut(s) 357, 704, 1087, 1617
BstDEI CTNAG 6 cut(s) 1017, 1110, 1218, 1227, 1359, 1485
BstH2I RGCGCY 2 cut(s) 291, 566
BstHHI GCGC 4 cut(s) 290, 565, 643, 844
BstKTI GATC 9 cut(s) 135, 384, 696, 774, 780, 798, 1122, 1380, 1466
BstMAI GTCTC 3 cut(s) 146, 209, 455
BstMBI GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
BstMWI GCNNNNNNNGC 6 cut(s) 147, 347, 356, 371, 850, 1616
BstSCI CCNGG 3 cut(s) 528, 546, 929
BstSFI CTRYAG 2 cut(s) 1431, 1620
BstV1I GCAGC 7 cut(s) 33, 552, 655, 693, 1390, 1417, 1606
BstXI CCANNNNNNTGG 1 cut(s) 1045
Bsu15I ATCGAT 1 cut(s) 1281
Bsu36I CCTNAGG 1 cut(s) 1218
BsuI GTATCC 1 cut(s) 1196
BsuRI GGCC 1 cut(s) 398
BsuTUI ATCGAT 1 cut(s) 1281
BtgZI GCGATG 1 cut(s) 856
BtrI CACGTC 2 cut(s) 556, 691
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 2 cut(s) 360, 963
BveI ACCTGC 4 cut(s) 191, 637, 897, 1613
Cac8I GCNNGC 4 cut(s) 357, 704, 1087, 1617
CciI TCATGA 1 cut(s) 1194
CfoI GCGC 4 cut(s) 290, 565, 643, 844
Cfr10I RCCGGY 3 cut(s) 146, 894, 1354
Cfr13I GGNCC 4 cut(s) 886, 1025, 1092, 1233
ClaI ATCGAT 1 cut(s) 1281
CseI GACGC 1 cut(s) 622
Csp6I GTAC 2 cut(s) 898, 1276
CspAI ACCGGT 1 cut(s) 894
CspCI CAANNNNNGTGG 2 cut(s) 1500, 1535
CviAII CATG 7 cut(s) 130, 241, 448, 781, 1039, 1195, 1372
CviQI GTAC 2 cut(s) 898, 1276
DdeI CTNAG 6 cut(s) 1017, 1110, 1218, 1227, 1359, 1485
DinI GGCGCC 1 cut(s) 289
DpnI GATC 9 cut(s) 134, 383, 695, 773, 779, 797, 1121, 1379, 1465
DpnII GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
DraI TTTAAA 1 cut(s) 1317
DriI GACNNNNNGTC 2 cut(s) 758, 907
Eam1104I CTCTTC 1 cut(s) 1304
Eam1105I GACNNNNNGTC 2 cut(s) 758, 907
EarI CTCTTC 1 cut(s) 1304
Ecl136II GAGCTC 4 cut(s) 178, 955, 1297, 1363
Eco24I GRGCYC 4 cut(s) 180, 957, 1299, 1365
Eco31I GGTCTC 2 cut(s) 146, 209
Eco32I GATATC 1 cut(s) 1482
Eco47I GGWCC 4 cut(s) 886, 1025, 1092, 1233
Eco53kI GAGCTC 4 cut(s) 178, 955, 1297, 1363
Eco81I CCTNAGG 1 cut(s) 1218
Eco88I CYCGRG 1 cut(s) 956
EcoICRI GAGCTC 4 cut(s) 178, 955, 1297, 1363
EcoRI GAATTC 2 cut(s) 26, 266
EcoRV GATATC 1 cut(s) 1482
EcoT38I GRGCYC 4 cut(s) 180, 957, 1299, 1365
EgeI GGCGCC 1 cut(s) 289
EheI GGCGCC 1 cut(s) 289
FaeI CATG 7 cut(s) 133, 244, 451, 784, 1042, 1198, 1375
FaqI GGGAC 2 cut(s) 108, 1105
FatI CATG 7 cut(s) 129, 240, 447, 780, 1038, 1194, 1371
FauI CCCGC 2 cut(s) 194, 1082
FbaI TGATCA 3 cut(s) 132, 381, 777
FblI GTMKAC 2 cut(s) 651, 1627
FriOI GRGCYC 4 cut(s) 180, 957, 1299, 1365
FspBI CTAG 1 cut(s) 1636
GlaI GCGC 4 cut(s) 289, 564, 642, 843
GsaI CCCAGC 1 cut(s) 502
HaeII RGCGCY 2 cut(s) 291, 566
HaeIII GGCC 1 cut(s) 398
HapII CCGG 9 cut(s) 50, 147, 530, 548, 884, 895, 930, 1164, 1355
HgaI GACGC 1 cut(s) 622
HhaI GCGC 4 cut(s) 290, 565, 643, 844
Hin1I GRCGYC 4 cut(s) 171, 234, 288, 506
Hin1II CATG 7 cut(s) 133, 244, 451, 784, 1042, 1198, 1375
Hin6I GCGC 4 cut(s) 288, 563, 641, 842
HinP1I GCGC 4 cut(s) 288, 563, 641, 842
HincII GTYRAC 2 cut(s) 652, 1309
HindII GTYRAC 2 cut(s) 652, 1309
HinfI GANTC 6 cut(s) 192, 753, 759, 880, 913, 1142
HpaII CCGG 9 cut(s) 50, 147, 530, 548, 884, 895, 930, 1164, 1355
HphI GGTGA 8 cut(s) 151, 172, 424, 547, 640, 844, 934, 1277
Hpy166II GTNNAC 4 cut(s) 406, 652, 1309, 1628
Hpy188III TCNNGA 9 cut(s) 23, 64, 97, 206, 579, 775, 884, 1164, 1195
Hpy8I GTNNAC 4 cut(s) 406, 652, 1309, 1628
HpyAV CCTTC 8 cut(s) 166, 283, 337, 409, 943, 1157, 1241, 1414
HpyCH4III ACNGT 6 cut(s) 20, 122, 967, 1096, 1313, 1472
HpyCH4IV ACGT 8 cut(s) 171, 234, 297, 402, 438, 506, 555, 690
HpyF10VI GCNNNNNNNGC 6 cut(s) 147, 347, 356, 371, 850, 1616
HpyF3I CTNAG 6 cut(s) 1017, 1110, 1218, 1227, 1359, 1485
HpySE526I ACGT 8 cut(s) 171, 234, 297, 402, 438, 506, 555, 690
Hsp92I GRCGYC 4 cut(s) 171, 234, 288, 506
Hsp92II CATG 7 cut(s) 133, 244, 451, 784, 1042, 1198, 1375
HspAI GCGC 4 cut(s) 288, 563, 641, 842
KasI GGCGCC 1 cut(s) 287
Kpn2I TCCGGA 2 cut(s) 883, 1163
Ksp22I TGATCA 3 cut(s) 132, 381, 777
Kzo9I GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
LguI GCTCTTC 1 cut(s) 1304
LmnI GCTCC 5 cut(s) 249, 764, 943, 952, 1579
Lsp1109I GCAGC 7 cut(s) 33, 552, 655, 693, 1390, 1417, 1606
LweI GCATC 4 cut(s) 315, 597, 1185, 1390
MaeI CTAG 1 cut(s) 1636
MaeII ACGT 8 cut(s) 171, 234, 297, 402, 438, 506, 555, 690
MaeIII GTNAC 4 cut(s) 20, 116, 628, 832
MalI GATC 9 cut(s) 134, 383, 695, 773, 779, 797, 1121, 1379, 1465
MboI GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
MboII GAAGA 3 cut(s) 1129, 1291, 1543
MhlI GDGCHC 5 cut(s) 180, 957, 1299, 1365, 1612
MluCI AATT 3 cut(s) 26, 110, 266
Mly113I GGCGCC 1 cut(s) 288
MlyI GAGTC 4 cut(s) 201, 747, 768, 889
MmeI TCCRAC 4 cut(s) 280, 393, 742, 789
MroI TCCGGA 2 cut(s) 883, 1163
MroXI GAANNNNTTC 2 cut(s) 326, 1146
MseI TTAA 4 cut(s) 441, 1316, 1329, 1497
MslI CAYNNNNRTG 2 cut(s) 452, 1263
MspA1I CMGCKG 1 cut(s) 502
MspI CCGG 9 cut(s) 50, 147, 530, 548, 884, 895, 930, 1164, 1355
MspR9I CCNGG 3 cut(s) 530, 548, 931
Mva1269I GAATGC 2 cut(s) 219, 278
MwoI GCNNNNNNNGC 6 cut(s) 147, 347, 356, 371, 850, 1616
NarI GGCGCC 1 cut(s) 288
NciI CCSGG 3 cut(s) 530, 548, 931
NdeII GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
NlaIII CATG 7 cut(s) 133, 244, 451, 784, 1042, 1198, 1375
NlaIV GGNNCC 5 cut(s) 289, 939, 1093, 1443, 1474
NmeAIII GCCGAG 3 cut(s) 195, 264, 367
NmuCI GTSAC 4 cut(s) 20, 116, 628, 832
OliI CACNNNNGTG 1 cut(s) 1263
PaeR7I CTCGAG 1 cut(s) 956
PagI TCATGA 1 cut(s) 1194
PciSI GCTCTTC 1 cut(s) 1304
PcsI WCGNNNNNNNCGW 3 cut(s) 581, 593, 1287
PctI GAATGC 2 cut(s) 219, 278
PdmI GAANNNNTTC 2 cut(s) 326, 1146
PfeI GAWTC 2 cut(s) 913, 1142
PflFI GACNNNGTC 3 cut(s) 236, 466, 965
PinAI ACCGGT 1 cut(s) 894
PleI GAGTC 4 cut(s) 200, 747, 767, 888
PluTI GGCGCC 1 cut(s) 291
PpsI GAGTC 4 cut(s) 200, 747, 767, 888
Ppu21I YACGTR 1 cut(s) 403
Psp124BI GAGCTC 4 cut(s) 180, 957, 1299, 1365
Psp1406I AACGTT 1 cut(s) 438
PspFI CCCAGC 1 cut(s) 498
PspN4I GGNNCC 5 cut(s) 289, 939, 1093, 1443, 1474
PspPI GGNCC 4 cut(s) 886, 1025, 1092, 1233
PspXI VCTCGAGB 1 cut(s) 956
PsrI GAACNNNNNNTAC 2 cut(s) 314, 346
PstI CTGCAG 2 cut(s) 1435, 1624
PsyI GACNNNGTC 3 cut(s) 236, 466, 965
PvuII CAGCTG 1 cut(s) 502
RsaI GTAC 2 cut(s) 899, 1277
RsaNI GTAC 2 cut(s) 898, 1276
RseI CAYNNNNRTG 2 cut(s) 452, 1263
SacI GAGCTC 4 cut(s) 180, 957, 1299, 1365
SalI GTCGAC 1 cut(s) 650
SapI GCTCTTC 1 cut(s) 1304
SaqAI TTAA 4 cut(s) 441, 1316, 1329, 1497
Sau3AI GATC 9 cut(s) 132, 381, 693, 771, 777, 795, 1119, 1377, 1463
Sau96I GGNCC 4 cut(s) 886, 1025, 1092, 1233
SchI GAGTC 4 cut(s) 201, 747, 768, 889
ScrFI CCNGG 3 cut(s) 530, 548, 931
SduI GDGCHC 5 cut(s) 180, 957, 1299, 1365, 1612
SfaNI GCATC 4 cut(s) 315, 597, 1185, 1390
SfcI CTRYAG 2 cut(s) 1431, 1620
SfoI GGCGCC 1 cut(s) 289
Sfr274I CTCGAG 1 cut(s) 956
SgrAI CRCCGGYG 1 cut(s) 146
SinI GGWCC 4 cut(s) 886, 1025, 1092, 1233
SlaI CTCGAG 1 cut(s) 956
SmiMI CAYNNNNRTG 2 cut(s) 452, 1263
SmlI CTYRAG 3 cut(s) 390, 956, 1603
SmoI CTYRAG 3 cut(s) 390, 956, 1603
Sse9I AATT 3 cut(s) 26, 110, 266
SsiI CCGC 7 cut(s) 187, 198, 395, 533, 750, 935, 1089
SspDI GGCGCC 1 cut(s) 287
SspI AATATT 1 cut(s) 1590
SspMI CTAG 1 cut(s) 1636
SstI GAGCTC 4 cut(s) 180, 957, 1299, 1365
StyD4I CCNGG 3 cut(s) 528, 546, 929
TaaI ACNGT 6 cut(s) 20, 122, 967, 1096, 1313, 1472
TaiI ACGT 8 cut(s) 174, 237, 300, 405, 441, 509, 558, 693
TaqI TCGA 9 cut(s) 96, 174, 207, 651, 911, 957, 1125, 1281, 1365
TasI AATT 3 cut(s) 26, 110, 266
TauI GCSGC 3 cut(s) 200, 398, 938
TfiI GAWTC 2 cut(s) 913, 1142
Tru1I TTAA 4 cut(s) 441, 1316, 1329, 1497
Tru9I TTAA 4 cut(s) 441, 1316, 1329, 1497
TscAI CASTG 2 cut(s) 367, 970
TseFI GTSAC 4 cut(s) 20, 116, 628, 832
TseI GCWGC 7 cut(s) 46, 565, 643, 706, 1403, 1430, 1619
Tsp45I GTSAC 4 cut(s) 20, 116, 628, 832
TspDTI ATGAA 7 cut(s) 19, 212, 1130, 1155, 1211, 1291, 1433
TspGWI ACGGA 3 cut(s) 26, 104, 1566
TspRI CASTG 2 cut(s) 367, 970
Tth111I GACNNNGTC 3 cut(s) 236, 466, 965
VpaK11BI GGWCC 4 cut(s) 886, 1025, 1092, 1233
XapI RAATTY 2 cut(s) 26, 266
XhoI CTCGAG 1 cut(s) 956
XmiI GTMKAC 2 cut(s) 651, 1627
XmnI GAANNNNTTC 2 cut(s) 326, 1146
XspI CTAG 1 cut(s) 1636
ZraI GACGTC 3 cut(s) 172, 235, 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.