Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000766

Physical Location & Seq

Genomic Coordinates Reverse (-)

13851667 .. 13853343

Gene Structure 1677 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G32645.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 570 bp

ATGAGGAACGAGAATGGCTACAATCCGAAGCTGATCTCAACGAGGGAATTGTTTAAGTCTGATCTCGATAAAGGTAAAGCACGTCTCCAAGTCCCTTTTAACCAAGTGAAAACTCCGGACTTTTTGACAGAGGACGAGACAAGAATCATACATGAAAATGCCATGAAGATTCGTGACGATGGTGTGCCTGTGAATTTGGTGGATCCTCGGATGAATAAGCATGCGCTTGAGTTGAGGAAGTGGAAGATGAAGGGAAACTGGAATTATGTCTTTGTTAAAGGTTGGAACGATGTGCTTGATGCTAACAAGTCGAATTCGTTTAAGGAAAAAGACGTCTTTCCTCTCTGGTCTTTCCGATCTGGAACAGGCAAACTCTGTTTTGCTCTCACCCCAAAAATTCCAGCAACGGCTCTACTTCAGGAGAATCTGGCAGTGGCGGCGATGGTGCTTCTACTTGAGGTGAATCTGGTCAGAACAAAGGAGAGAGAACTTGTTTTCTTATATTATCACAAAAAGATCCATCAGGCTACAACAACACACAACAAGTGTAAAGTTTCTTGGCTCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF313

Protein Analysis

189

Amino Acids

22.02

Weight (kDa)

9.6

Isoelectric Point (pI)

26.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
At2g31720-like	PF03754	1 - 100	5.8e-39	B3 domain-containing protein At2g31720-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05920 AT1G05930 AT1G32030 AT2G27410 AT2G31420 AT2G31460 AT2G32645 AT3G24850 AT3G49610 AT5G24050 AT5G38490 AT5G38500
fragaria_vesca	FvH4_6g01440 FvH4_7g12330 FvH4_7g31340 FvH4_7g31730
malus_domestica	MD01G1220100.v1.1 MD07G1290000.v1.1
prunus_persica	Prupe.2G159700_v2.0.a1 Prupe.2G278500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0380921 RchiOBHm_Chr1g0380951
rosa_laevigata	RLG00000026257 RLG00000026259 RLG00000026262 RLG00000026304 RLG00000028431
rosa_multiflora	Rmu_co8079062.1_g000001 Rmu_sc0005371.1_g000007 Rmu_sc0013826.1_g000004 Rmu_sc0018708.1_g000005 Rmu_sc0041327.1_g000001
rosa_roxburghii	Rroxscaffold_4G00278910 Rroxscaffold_4G00278920 Rroxscaffold_4G00278960 Rroxscaffold_4G00279400 Rroxscaffold_4G00304070
rosa_rugosa	Rorug01G0216400 Rorug01G0216500 Rorug01G0420900 Rorug01G0425600 Rorug01G0425700
rosa_samantha	Rh1AG230900 Rh1AG445200 Rh1AG449300 Rh1AG449600 Rh1AG449800 Rh1BG200700 Rh1BG400300 Rh1BG400400 Rh1BG405000 Rh1BG405100 Rh1BG405300 Rh1BG405500 Rh1CG214900 Rh1CG419000 Rh1CG419200 Rh1CG419500 Rh1DG228300 Rh1DG430300 Rh1DG430400 Rh1DG435400 Rh1DG435600 Rh1DG435800 Rh1DG436000
rosa_wichuraiana	Rw1G020070 Rw1G038740 Rw1G039160 Rw1G039180 Rw3G001230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	336
AccIII	TCCGGA	1 cut(s)	115
AciI	CCGC	1 cut(s)	437
AclWI	GGATC	3 cut(s)	197, 210, 511
AcsI	RAATTY	3 cut(s)	193, 313, 396
AcuI	CTGAAG	1 cut(s)	401
AcyI	GRCGYC	1 cut(s)	333
AjiI	CACGTC	1 cut(s)	83
AluBI	AGCT	1 cut(s)	31
AluI	AGCT	1 cut(s)	31
Alw26I	GTCTC	2 cut(s)	89, 131
AlwI	GGATC	3 cut(s)	197, 210, 511
Aor13HI	TCCGGA	1 cut(s)	115
ApoI	RAATTY	3 cut(s)	193, 313, 396
AspLEI	GCGC	1 cut(s)	226
AsuHPI	GGTGA	2 cut(s)	379, 472
BamHI	GGATCC	1 cut(s)	202
BccI	CCATC	3 cut(s)	173, 436, 528
BceAI	ACGGC	1 cut(s)	423
BcoDI	GTCTC	2 cut(s)	89, 131
BisI	GCNGC	1 cut(s)	438
BlsI	GCNGC	1 cut(s)	439
BmgBI	CACGTC	1 cut(s)	83
BmiI	GGNNCC	1 cut(s)	204
BmsI	GCATC	1 cut(s)	289
BpuEI	CTTGAG	2 cut(s)	248, 476
BsaHI	GRCGYC	1 cut(s)	333
BsaJI	CCNNGG	1 cut(s)	206
BsaWI	WCCGGW	1 cut(s)	115
Bse1I	ACTGG	1 cut(s)	263
BseAI	TCCGGA	1 cut(s)	115
BseDI	CCNNGG	1 cut(s)	206
BseGI	GGATG	1 cut(s)	216
BseNI	ACTGG	1 cut(s)	263
BsiSI	CCGG	1 cut(s)	116
BslFI	GGGAC	1 cut(s)	77
BsmAI	GTCTC	2 cut(s)	89, 131
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	1 cut(s)	77
Bsp13I	TCCGGA	1 cut(s)	115
Bsp143I	GATC	5 cut(s)	33, 61, 202, 356, 516
BspACI	CCGC	1 cut(s)	437
BspEI	TCCGGA	1 cut(s)	115
BspLI	GGNNCC	1 cut(s)	204
BspPI	GGATC	3 cut(s)	197, 210, 511
BsrI	ACTGG	1 cut(s)	263
BssECI	CCNNGG	1 cut(s)	206
BssMI	GATC	5 cut(s)	33, 61, 202, 356, 516
BssNI	GRCGYC	1 cut(s)	333
BstACI	GRCGYC	1 cut(s)	333
BstC8I	GCNNGC	1 cut(s)	222
BstF5I	GGATG	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	226
BstKTI	GATC	5 cut(s)	36, 64, 205, 359, 519
BstMAI	GTCTC	2 cut(s)	89, 131
BstMBI	GATC	5 cut(s)	33, 61, 202, 356, 516
BstMWI	GCNNNNNNNGC	1 cut(s)	437
BstNSI	RCATGY	1 cut(s)	224
BstX2I	RGATCY	2 cut(s)	202, 516
BstYI	RGATCY	2 cut(s)	202, 516
BtgZI	GCGATG	1 cut(s)	455
BtrI	CACGTC	1 cut(s)	83
BtsCI	GGATG	1 cut(s)	216
BtsI	GCAGTG	1 cut(s)	438
BtsIMutI	CAGTG	1 cut(s)	438
Cac8I	GCNNGC	1 cut(s)	222
CfoI	GCGC	1 cut(s)	226
CviAII	CATG	3 cut(s)	152, 163, 221
CviJI	RGCY	5 cut(s)	18, 31, 410, 527, 562
CviKI_1	RGCY	5 cut(s)	18, 31, 410, 527, 562
DpnI	GATC	5 cut(s)	35, 63, 204, 358, 518
DpnII	GATC	5 cut(s)	33, 61, 202, 356, 516
Eco57I	CTGAAG	1 cut(s)	401
EcoRI	GAATTC	1 cut(s)	313
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	3 cut(s)	155, 166, 224
FaiI	YATR	6 cut(s)	149, 153, 164, 222, 267, 502
FaqI	GGGAC	1 cut(s)	77
FatI	CATG	3 cut(s)	151, 162, 220
Fnu4HI	GCNGC	1 cut(s)	438
FokI	GGATG	1 cut(s)	223
Fsp4HI	GCNGC	1 cut(s)	438
GlaI	GCGC	1 cut(s)	225
GluI	GCNGC	1 cut(s)	438
HapII	CCGG	1 cut(s)	116
HhaI	GCGC	1 cut(s)	226
Hin1I	GRCGYC	1 cut(s)	333
Hin1II	CATG	3 cut(s)	155, 166, 224
Hin6I	GCGC	1 cut(s)	224
HinP1I	GCGC	1 cut(s)	224
HinfI	GANTC	4 cut(s)	144, 169, 424, 463
HpaII	CCGG	1 cut(s)	116
HphI	GGTGA	2 cut(s)	379, 472
Hpy188I	TCNGA	5 cut(s)	27, 61, 210, 356, 473
Hpy188III	TCNNGA	5 cut(s)	65, 116, 173, 360, 419
HpyAV	CCTTC	1 cut(s)	244
HpyCH4IV	ACGT	2 cut(s)	82, 333
HpyF10VI	GCNNNNNNNGC	1 cut(s)	437
HpySE526I	ACGT	2 cut(s)	82, 333
Hsp92I	GRCGYC	1 cut(s)	333
Hsp92II	CATG	3 cut(s)	155, 166, 224
HspAI	GCGC	1 cut(s)	224
Kpn2I	TCCGGA	1 cut(s)	115
Kzo9I	GATC	5 cut(s)	33, 61, 202, 356, 516
LweI	GCATC	1 cut(s)	289
MaeII	ACGT	2 cut(s)	82, 333
MaeIII	GTNAC	1 cut(s)	173
MalI	GATC	5 cut(s)	35, 63, 204, 358, 518
MboI	GATC	5 cut(s)	33, 61, 202, 356, 516
MboII	GAAGA	2 cut(s)	178, 256
MflI	RGATCY	2 cut(s)	202, 516
MluCI	AATT	5 cut(s)	47, 193, 262, 313, 396
MmeI	TCCRAC	1 cut(s)	263
MnlI	CCTC	6 cut(s)	36, 124, 216, 228, 351, 451
MroI	TCCGGA	1 cut(s)	115
MseI	TTAA	4 cut(s)	54, 99, 276, 321
MslI	CAYNNNNRTG	1 cut(s)	156
MspI	CCGG	1 cut(s)	116
MwoI	GCNNNNNNNGC	1 cut(s)	437
NdeII	GATC	5 cut(s)	33, 61, 202, 356, 516
NlaIII	CATG	3 cut(s)	155, 166, 224
NlaIV	GGNNCC	1 cut(s)	204
NmuCI	GTSAC	1 cut(s)	173
NspI	RCATGY	1 cut(s)	224
PaeI	GCATGC	1 cut(s)	224
PfeI	GAWTC	4 cut(s)	144, 169, 424, 463
PkrI	GCNGC	1 cut(s)	439
PspN4I	GGNNCC	1 cut(s)	204
PsuI	RGATCY	2 cut(s)	202, 516
RseI	CAYNNNNRTG	1 cut(s)	156
SaqAI	TTAA	4 cut(s)	54, 99, 276, 321
SatI	GCNGC	1 cut(s)	438
Sau3AI	GATC	5 cut(s)	33, 61, 202, 356, 516
SetI	ASST	6 cut(s)	33, 76, 85, 283, 336, 462
SfaNI	GCATC	1 cut(s)	289
SmiMI	CAYNNNNRTG	1 cut(s)	156
SmlI	CTYRAG	2 cut(s)	227, 455
SmoI	CTYRAG	2 cut(s)	227, 455
SphI	GCATGC	1 cut(s)	224
Sse9I	AATT	5 cut(s)	47, 193, 262, 313, 396
SsiI	CCGC	1 cut(s)	437
TaiI	ACGT	2 cut(s)	85, 336
TaqI	TCGA	2 cut(s)	66, 311
TasI	AATT	5 cut(s)	47, 193, 262, 313, 396
TauI	GCSGC	1 cut(s)	440
TfiI	GAWTC	4 cut(s)	144, 169, 424, 463
Tru1I	TTAA	4 cut(s)	54, 99, 276, 321
Tru9I	TTAA	4 cut(s)	54, 99, 276, 321
TscAI	CASTG	1 cut(s)	438
TseFI	GTSAC	1 cut(s)	173
Tsp45I	GTSAC	1 cut(s)	173
TspDTI	ATGAA	4 cut(s)	168, 179, 227, 263
TspRI	CASTG	1 cut(s)	438
XapI	RAATTY	3 cut(s)	193, 313, 396
XceI	RCATGY	1 cut(s)	224
ZraI	GACGTC	1 cut(s)	334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.