Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0000766

Physical Location & Seq

Genomic Coordinates Reverse (-)

21200244 .. 21201926

Gene Structure 1683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G159700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGAAATCGACAAGCATTATGATTCGAGAGAAGGAAAAAGAACAGAAGATGGGTTTGCTCAGGAAGAAAGATTCTGATGAGCATGGCTATGGCTCGTCCCCGCTTGATACGTTGGCAGAGGCAGCTTGTTTTATTGCTGGCCAGAAAACGAAGGAAGAAATTTTGGTACCTCCAAAGAAACGCTTCTCCAACTTCAACTTCTTGAATGATATGTCCGCTGGCCCTAGCAATATGTCTACTACTCCAAAAGAAGAAAACGGGCTCATCATCAGAGGAGAAGAAGAAGTCTCTCACTGCCCCATCGAACAAGTCACAAATTTACTTGAGGAATATCTAATACATAAGTACCCTAAGAAACTAAGGTCGCCATGTAAAAGTATCACTATATTCGGCCAAAAGCTAAGCTGTGCTAAGAAGAAGAGAGGTAGCTTTTCCAACATGTTACTGGGCTTGAACGTGAAGAAAGACATTAAGATGAAAAAGAGGAGGGTGGTGGTGGCGGGGAAGAACAAGGGTAAGAAGGTCAAATTCGACAACGACATGCCTCCCTCTAACTTGCCTGAAGAATTCAAGAGTCTGATTGAAAATATGAACGGGACAAATGTGCAAAGGTTGGTGCACAAGAGTTTGTTTGAGAGTGACATAAAGAGCCAGCAATGCAGGCTGCTGCTGCCTCGGCAGCAAACCAAATCCACGACTTTCCTTGAACCCCATGAGAAGAATATGCTAAGAAATTATGGGTTCCTTACAGTTCCATTGATAGACCCAAAGCTTAAGCAACAAGAAATAAACTTGGGGTTGTGGAATCCAAACAAAGCAAAGGAATTCTATGTGTTAAAATCTCCCTGGAAAAGCATTGTGAGTGAGAATGGACTAGACATTGATGATGTGGTGGAGCTTTGGTCATTCCGGGTTAATCATAACAACAATGAGATTAATGGTGGCTACGACAATGGCGGTCAGCTTCATTTTGCTCTTGTTTTGGTTGGGGATGCTATTAAAAAGGAAAGTGACAAAGAGGGTACTACTAGTTCTGCTAATGATGAAGGTAGTAGTGTGAGCAACAATTTAATGGATGTACAATATTTATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF313

Protein Analysis

365

Amino Acids

41.21

Weight (kDa)

9.14

Isoelectric Point (pI)

48.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05920 AT1G05930 AT1G32030 AT2G27410 AT2G31420 AT2G31460 AT2G32645 AT3G24850 AT3G49610 AT5G24050 AT5G38490 AT5G38500
fragaria_vesca	FvH4_6g01440 FvH4_7g12330 FvH4_7g31340 FvH4_7g31730
malus_domestica	MD01G1220100.v1.1 MD07G1290000.v1.1
prunus_persica	Prupe.2G159700_v2.0.a1 Prupe.2G278500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0380921 RchiOBHm_Chr1g0380951
rosa_laevigata	RLG00000026257 RLG00000026259 RLG00000026262 RLG00000026304 RLG00000028431
rosa_multiflora	Rmu_co8079062.1_g000001 Rmu_sc0005371.1_g000007 Rmu_sc0013826.1_g000004 Rmu_sc0018708.1_g000005 Rmu_sc0041327.1_g000001
rosa_roxburghii	Rroxscaffold_4G00278910 Rroxscaffold_4G00278920 Rroxscaffold_4G00278960 Rroxscaffold_4G00279400 Rroxscaffold_4G00304070
rosa_rugosa	Rorug01G0216400 Rorug01G0216500 Rorug01G0420900 Rorug01G0425600 Rorug01G0425700
rosa_samantha	Rh1AG230900 Rh1AG445200 Rh1AG449300 Rh1AG449600 Rh1AG449800 Rh1BG200700 Rh1BG400300 Rh1BG400400 Rh1BG405000 Rh1BG405100 Rh1BG405300 Rh1BG405500 Rh1CG214900 Rh1CG419000 Rh1CG419200 Rh1CG419500 Rh1DG228300 Rh1DG430300 Rh1DG430400 Rh1DG435400 Rh1DG435600 Rh1DG435800 Rh1DG436000
rosa_wichuraiana	Rw1G020070 Rw1G038740 Rw1G039160 Rw1G039180 Rw3G001230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	166
AccB1I	GGYRCC	1 cut(s)	166
AccI	GTMKAC	1 cut(s)	236
AciI	CCGC	4 cut(s)	101, 216, 500, 957
AcoI	YGGCCR	2 cut(s)	139, 391
AcsI	RAATTY	5 cut(s)	159, 316, 527, 566, 824
AcuI	CTGAAG	1 cut(s)	582
AfaI	GTAC	4 cut(s)	168, 347, 1024, 1080
AflII	CTTAAG	1 cut(s)	773
AflIII	ACRYGT	1 cut(s)	438
AgsI	TTSAA	6 cut(s)	196, 205, 454, 571, 584, 707
AhlI	ACTAGT	1 cut(s)	1028
AjnI	CCWGG	1 cut(s)	845
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
AluBI	AGCT	7 cut(s)	125, 400, 405, 429, 772, 898, 964
AluI	AGCT	7 cut(s)	125, 400, 405, 429, 772, 898, 964
Alw21I	GWGCWC	1 cut(s)	621
Alw26I	GTCTC	1 cut(s)	292
Alw44I	GTGCAC	1 cut(s)	617
AoxI	GGCC	3 cut(s)	139, 220, 391
ApaLI	GTGCAC	1 cut(s)	617
ApeKI	GCWGC	5 cut(s)	122, 664, 667, 670, 679
ApoI	RAATTY	5 cut(s)	159, 316, 527, 566, 824
AseI	ATTAAT	1 cut(s)	936
Asp700I	GAANNNNTTC	1 cut(s)	182
Asp718I	GGTACC	1 cut(s)	166
AspS9I	GGNCC	1 cut(s)	221
AsuC2I	CCSGG	1 cut(s)	911
BaeGI	GKGCMC	1 cut(s)	621
BaeI	ACNNNNGTAYC	2 cut(s)	329, 362
BalI	TGGCCA	1 cut(s)	141
BanI	GGYRCC	1 cut(s)	166
BanII	GRGCYC	1 cut(s)	264
Bbv12I	GWGCWC	1 cut(s)	621
BbvI	GCAGC	5 cut(s)	134, 651, 654, 657, 691
BccI	CCATC	2 cut(s)	43, 308
BciT130I	CCWGG	1 cut(s)	847
BcnI	CCSGG	1 cut(s)	911
BcoDI	GTCTC	1 cut(s)	292
BcuI	ACTAGT	1 cut(s)	1028
BfaI	CTAG	3 cut(s)	225, 875, 1029
BfrI	CTTAAG	1 cut(s)	773
BisI	GCNGC	5 cut(s)	123, 665, 668, 671, 680
BlpI	GCTNAGC	1 cut(s)	401
BlsI	GCNGC	5 cut(s)	124, 666, 669, 672, 681
Bme1390I	CCNGG	2 cut(s)	847, 911
BmgT120I	GGNCC	1 cut(s)	221
BmiI	GGNNCC	2 cut(s)	168, 743
BmrFI	CCNGG	2 cut(s)	847, 911
BmrI	ACTGGG	1 cut(s)	455
BmsI	GCATC	1 cut(s)	982
BmuI	ACTGGG	1 cut(s)	455
Bpu10I	CCTNAGC	1 cut(s)	59
Bpu1102I	GCTNAGC	1 cut(s)	401
BpuEI	CTTGAG	1 cut(s)	344
BpuMI	CCSGG	1 cut(s)	911
BsaJI	CCNNGG	2 cut(s)	674, 845
BsaXI	ACNNNNNCTCC	2 cut(s)	887, 917
Bse1I	ACTGG	1 cut(s)	450
Bse3DI	GCAATG	1 cut(s)	662
BseBI	CCWGG	1 cut(s)	847
BseDI	CCNNGG	2 cut(s)	674, 845
BseGI	GGATG	2 cut(s)	997, 1081
BseMI	GCAATG	1 cut(s)	662
BseMII	CTCAG	1 cut(s)	73
BseNI	ACTGG	1 cut(s)	450
BseRI	GAGGAG	2 cut(s)	288, 499
BseSI	GKGCMC	1 cut(s)	621
BseXI	GCAGC	5 cut(s)	134, 651, 654, 657, 691
BshFI	GGCC	3 cut(s)	141, 222, 393
BshNI	GGYRCC	1 cut(s)	166
BsiHKAI	GWGCWC	1 cut(s)	621
BsiSI	CCGG	1 cut(s)	910
BslFI	GGGAC	2 cut(s)	82, 610
BsmAI	GTCTC	1 cut(s)	292
BsmFI	GGGAC	2 cut(s)	82, 610
BsnI	GGCC	3 cut(s)	141, 222, 393
Bsp1286I	GDGCHC	2 cut(s)	264, 621
Bsp1407I	TGTACA	1 cut(s)	1078
Bsp1720I	GCTNAGC	1 cut(s)	401
BspACI	CCGC	4 cut(s)	101, 216, 500, 957
BspANI	GGCC	3 cut(s)	141, 222, 393
BspCNI	CTCAG	1 cut(s)	72
BspLI	GGNNCC	2 cut(s)	168, 743
BspT107I	GGYRCC	1 cut(s)	166
BspTI	CTTAAG	1 cut(s)	773
BsrDI	GCAATG	1 cut(s)	662
BsrGI	TGTACA	1 cut(s)	1078
BsrI	ACTGG	1 cut(s)	450
BssECI	CCNNGG	2 cut(s)	674, 845
Bst2UI	CCWGG	1 cut(s)	847
Bst4CI	ACNGT	1 cut(s)	751
Bst6I	CTCTTC	1 cut(s)	413
BstAFI	CTTAAG	1 cut(s)	773
BstAUI	TGTACA	1 cut(s)	1078
BstC8I	GCNNGC	4 cut(s)	139, 220, 653, 662
BstDEI	CTNAG	6 cut(s)	59, 351, 359, 401, 411, 728
BstF5I	GGATG	2 cut(s)	997, 1081
BstMAI	GTCTC	1 cut(s)	292
BstMWI	GCNNNNNNNGC	6 cut(s)	122, 657, 661, 670, 676, 679
BstNI	CCWGG	1 cut(s)	847
BstNSI	RCATGY	2 cut(s)	442, 544
BstSCI	CCNGG	2 cut(s)	845, 909
BstSLI	GKGCMC	1 cut(s)	621
BstV1I	GCAGC	5 cut(s)	134, 651, 654, 657, 691
BsuRI	GGCC	3 cut(s)	141, 222, 393
BtsCI	GGATG	2 cut(s)	997, 1081
BtsI	GCAGTG	1 cut(s)	292
BtsIMutI	CAGTG	1 cut(s)	292
Cac8I	GCNNGC	4 cut(s)	139, 220, 653, 662
Cfr13I	GGNCC	1 cut(s)	221
Csp6I	GTAC	4 cut(s)	167, 346, 1023, 1079
CviAII	CATG	5 cut(s)	83, 369, 439, 541, 713
CviQI	GTAC	4 cut(s)	167, 346, 1023, 1079
DdeI	CTNAG	6 cut(s)	59, 351, 359, 401, 411, 728
EaeI	YGGCCR	2 cut(s)	139, 391
Eam1104I	CTCTTC	1 cut(s)	413
EarI	CTCTTC	1 cut(s)	413
Eco24I	GRGCYC	1 cut(s)	264
Eco57I	CTGAAG	1 cut(s)	582
EcoRI	GAATTC	2 cut(s)	566, 824
EcoRII	CCWGG	1 cut(s)	845
EcoT38I	GRGCYC	1 cut(s)	264
FaeI	CATG	5 cut(s)	86, 372, 442, 544, 716
FalI	AAGNNNNNCTT	2 cut(s)	167, 199
FaqI	GGGAC	2 cut(s)	82, 610
FatI	CATG	5 cut(s)	82, 368, 438, 540, 712
FauI	CCCGC	2 cut(s)	108, 493
FblI	GTMKAC	1 cut(s)	236
Fnu4HI	GCNGC	5 cut(s)	123, 665, 668, 671, 680
FokI	GGATG	2 cut(s)	1004, 1088
FriOI	GRGCYC	1 cut(s)	264
Fsp4HI	GCNGC	5 cut(s)	123, 665, 668, 671, 680
FspBI	CTAG	3 cut(s)	225, 875, 1029
GluI	GCNGC	5 cut(s)	123, 665, 668, 671, 680
HaeIII	GGCC	3 cut(s)	141, 222, 393
HapII	CCGG	1 cut(s)	910
Hin1II	CATG	5 cut(s)	86, 372, 442, 544, 716
HindIII	AAGCTT	1 cut(s)	770
HinfI	GANTC	4 cut(s)	22, 71, 574, 805
HpaII	CCGG	1 cut(s)	910
Hpy166II	GTNNAC	2 cut(s)	237, 619
Hpy188I	TCNGA	3 cut(s)	76, 272, 579
Hpy188III	TCNNGA	4 cut(s)	26, 61, 202, 571
Hpy8I	GTNNAC	2 cut(s)	237, 619
HpyAV	CCTTC	4 cut(s)	25, 145, 514, 1040
HpyCH4III	ACNGT	1 cut(s)	751
HpyCH4IV	ACGT	2 cut(s)	110, 456
HpyCH4V	TGCA	3 cut(s)	607, 619, 660
HpyF10VI	GCNNNNNNNGC	6 cut(s)	122, 657, 661, 670, 676, 679
HpyF3I	CTNAG	6 cut(s)	59, 351, 359, 401, 411, 728
HpySE526I	ACGT	2 cut(s)	110, 456
Hsp92II	CATG	5 cut(s)	86, 372, 442, 544, 716
KpnI	GGTACC	1 cut(s)	170
LmnI	GCTCC	1 cut(s)	895
Lsp1109I	GCAGC	5 cut(s)	134, 651, 654, 657, 691
LweI	GCATC	1 cut(s)	982
MaeI	CTAG	3 cut(s)	225, 875, 1029
MaeII	ACGT	2 cut(s)	110, 456
MaeIII	GTNAC	4 cut(s)	310, 441, 638, 1010
MhlI	GDGCHC	2 cut(s)	264, 621
MlsI	TGGCCA	1 cut(s)	141
MluCI	AATT	7 cut(s)	159, 316, 527, 566, 733, 824, 1066
MluNI	TGGCCA	1 cut(s)	141
MlyI	GAGTC	1 cut(s)	583
MmeI	TCCRAC	2 cut(s)	213, 459
Mox20I	TGGCCA	1 cut(s)	141
MroXI	GAANNNNTTC	1 cut(s)	182
MscI	TGGCCA	1 cut(s)	141
MseI	TTAA	7 cut(s)	471, 774, 836, 915, 936, 999, 1070
MslI	CAYNNNNRTG	2 cut(s)	87, 473
Msp20I	TGGCCA	1 cut(s)	141
MspA1I	CMGCKG	1 cut(s)	218
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	1 cut(s)	910
MspR9I	CCNGG	2 cut(s)	847, 911
MvaI	CCWGG	1 cut(s)	847
MwoI	GCNNNNNNNGC	6 cut(s)	122, 657, 661, 670, 676, 679
NciI	CCSGG	1 cut(s)	911
NlaIII	CATG	5 cut(s)	86, 372, 442, 544, 716
NlaIV	GGNNCC	2 cut(s)	168, 743
NmeAIII	GCCGAG	1 cut(s)	655
NmuCI	GTSAC	3 cut(s)	310, 638, 1010
NspI	RCATGY	2 cut(s)	442, 544
PciI	ACATGT	1 cut(s)	438
PdmI	GAANNNNTTC	1 cut(s)	182
PfeI	GAWTC	3 cut(s)	22, 71, 805
PkrI	GCNGC	5 cut(s)	124, 666, 669, 672, 681
PleI	GAGTC	1 cut(s)	582
PpsI	GAGTC	1 cut(s)	582
PscI	ACATGT	1 cut(s)	438
PshBI	ATTAAT	1 cut(s)	936
Psp6I	CCWGG	1 cut(s)	845
PspGI	CCWGG	1 cut(s)	845
PspN4I	GGNNCC	2 cut(s)	168, 743
PspPI	GGNCC	1 cut(s)	221
PsrI	GAACNNNNNNTAC	2 cut(s)	1015, 1047
RsaI	GTAC	4 cut(s)	168, 347, 1024, 1080
RsaNI	GTAC	4 cut(s)	167, 346, 1023, 1079
RseI	CAYNNNNRTG	2 cut(s)	87, 473
SaqAI	TTAA	7 cut(s)	471, 774, 836, 915, 936, 999, 1070
SatI	GCNGC	5 cut(s)	123, 665, 668, 671, 680
Sau96I	GGNCC	1 cut(s)	221
SchI	GAGTC	1 cut(s)	583
ScrFI	CCNGG	2 cut(s)	847, 911
SduI	GDGCHC	2 cut(s)	264, 621
SfaNI	GCATC	1 cut(s)	982
SmiMI	CAYNNNNRTG	2 cut(s)	87, 473
SmlI	CTYRAG	2 cut(s)	323, 773
SmoI	CTYRAG	2 cut(s)	323, 773
SpeI	ACTAGT	1 cut(s)	1028
Sse9I	AATT	7 cut(s)	159, 316, 527, 566, 733, 824, 1066
SsiI	CCGC	4 cut(s)	101, 216, 500, 957
SspI	AATATT	1 cut(s)	1085
SspMI	CTAG	3 cut(s)	225, 875, 1029
StyD4I	CCNGG	2 cut(s)	845, 909
TaaI	ACNGT	1 cut(s)	751
TaiI	ACGT	2 cut(s)	113, 459
TaqI	TCGA	4 cut(s)	8, 25, 303, 531
TasI	AATT	7 cut(s)	159, 316, 527, 566, 733, 824, 1066
TatI	WGTACW	1 cut(s)	1078
TfiI	GAWTC	3 cut(s)	22, 71, 805
Tru1I	TTAA	7 cut(s)	471, 774, 836, 915, 936, 999, 1070
Tru9I	TTAA	7 cut(s)	471, 774, 836, 915, 936, 999, 1070
TscAI	CASTG	1 cut(s)	299
TseFI	GTSAC	3 cut(s)	310, 638, 1010
TseI	GCWGC	5 cut(s)	122, 664, 667, 670, 679
Tsp45I	GTSAC	3 cut(s)	310, 638, 1010
TspDTI	ATGAA	5 cut(s)	17, 491, 605, 956, 1059
TspRI	CASTG	1 cut(s)	299
Vha464I	CTTAAG	1 cut(s)	773
VneI	GTGCAC	1 cut(s)	617
VspI	ATTAAT	1 cut(s)	936
XapI	RAATTY	5 cut(s)	159, 316, 527, 566, 824
XceI	RCATGY	2 cut(s)	442, 544
XcmI	CCANNNNNNNNNTGG	1 cut(s)	442
XmiI	GTMKAC	1 cut(s)	236
XmnI	GAANNNNTTC	1 cut(s)	182
XspI	CTAG	3 cut(s)	225, 875, 1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.