Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Forward (+)

23479781 .. 23482136

Gene Structure 2356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G58003.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGAGCGTAGCAAGTGATTCTCCAGTTCATTCATCAAGTAGTAGTGACGATCTTGCTGCATTCCTTGATGCTGAATTAGACTCTGCATCAGATGCTTCGTCTGGACCCAGCGAAGAAGAAGAAGCTGAGGATGATGTAGAATCTGGGTTAAAGAGACAAAAGTTGGAGCATTTAGAGGAAGCATCCTCAAGCAAAGGCGAATGCGAGCATCCAGGATCATTTGGGAATATGTGCTTTGTATGTGGACAAAAACTGGAAGAAACTGGTGTTTCATTTAGATACATACACAAGGAAATGAGGCTCAATGAAGATGAAATCTCCCGGTTGCGTGATTCAGATTCGAGATTCTTGCAACGCCAGCGGAAGTTGTATTTAGTTCTCGATCTAGACCACACACTGCTAAATACAACCATACTGAGGGACCTAAAACCAGAGGAGGAATACTTGAAAAGTCATACTCATTCTCTTCAAGATGGTTGCAATGTTTCCGGAGGCAGTCTTTTCCTACTGGAATTTATGCAAATGATGACCAAACTGAGGCCGTTTGTTCACTCATTTCTAAAAGAAGCTAGTGAGATGTTTGTGATGTACATATACACAATGGGAGATAGGAATTATGCACGACAGATGGCCAAGCTGCTGGACCCCAAAGGAGAGTACTTTGGTGATCGGGTCATTTCTCGGGATGACGGCACAGTGAGACATGAAAAGAGTCTAGATGTGGTGCTTGGACAAGAAAGTGCTGTTCTGATTCTTGACGATACAGAGAATGCGTGGCCAAAGCACAAGGACAATTTGATTGTGATAGAGAGATATCACTTTTTTTCTTCGAGCTGCAGGCAGTTTGATCACAGATACAAGTCTCTATCGGAGTTGAAGAGTGATGAGAGTGAACCAGATGGGGCACTTGCAACTGTCCTGAAAGTCCTAAAACAAGCGCATGCTCTATTCTTTGAGAATGTGGATGAAGGCATATCAAACAGAGATGTTAGGTTAATGCTGAAACAAGTGCGTAAAGAGATACTTAAAGGATGTAAAATAGTGTTCAGTCGGGTGTTCCCAACCAAGGCAAAGCCAGAAGATCACCCCCTGTGGAAAATGGCTGAGGAACTGGGAGCCACCTGCGCAACGGAAGTGGATGCATCAGTGACACACGTTGTGGCAATGGATGTGGGAACAGAGAAGGCTCGTTGGGCCGTTAGAGAGAAGAAGTATGTGGTTCATAGAGGATGGATAGATGCAGCTAATTACCTTTGGATGAAACAGCCAGAAGAGAACTTCGGTTTAGAGCAGCTCAAGAAGCAATTGACCGAAGAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

440

Amino Acids

50.26

Weight (kDa)

5.25

Isoelectric Point (pI)

48.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	68 - 237	1.9e-28	NLI interacting factor-like phosphatase
BRCT	PF00533	284 - 357	5.5e-07	BRCA1 C Terminus (BRCT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1130
Acc16I	TGCGCA	1 cut(s)	1126
Acc36I	ACCTGC	1 cut(s)	1130
AccIII	TCCGGA	1 cut(s)	488
AciI	CCGC	1 cut(s)	361
AclWI	GGATC	1 cut(s)	223
AcoI	YGGCCR	2 cut(s)	630, 776
AcsI	RAATTY	1 cut(s)	512
AdeI	CACNNNGTG	1 cut(s)	1159
AfaI	GTAC	2 cut(s)	590, 659
AfiI	CCNNNNNNNGG	3 cut(s)	417, 537, 1066
AflIII	ACRYGT	1 cut(s)	1153
AgsI	TTSAA	3 cut(s)	448, 470, 877
AjnI	CCWGG	1 cut(s)	211
AluBI	AGCT	6 cut(s)	125, 569, 637, 834, 1244, 1294
AluI	AGCT	6 cut(s)	125, 569, 637, 834, 1244, 1294
Alw26I	GTCTC	3 cut(s)	148, 694, 867
AlwI	GGATC	1 cut(s)	223
Ama87I	CYCGRG	1 cut(s)	681
Aor13HI	TCCGGA	1 cut(s)	488
AoxI	GGCC	4 cut(s)	539, 630, 776, 1194
ApeKI	GCWGC	5 cut(s)	56, 637, 834, 1241, 1291
ApoI	RAATTY	1 cut(s)	512
AspLEI	GCGC	2 cut(s)	940, 1127
AspS9I	GGNCC	4 cut(s)	104, 421, 643, 1194
AsuC2I	CCSGG	1 cut(s)	322
AsuHPI	GGTGA	2 cut(s)	677, 1076
AvaI	CYCGRG	1 cut(s)	681
AvaII	GGWCC	3 cut(s)	104, 421, 643
BaeGI	GKGCMC	1 cut(s)	907
BalI	TGGCCA	2 cut(s)	632, 778
BbvCI	CCTCAGC	2 cut(s)	126, 1104
BbvI	GCAGC	5 cut(s)	43, 624, 821, 1253, 1303
BccI	CCATC	4 cut(s)	467, 622, 893, 1224
BceAI	ACGGC	3 cut(s)	526, 706, 1181
BcgI	CGANNNNNNTGC	4 cut(s)	38, 72, 331, 365
BciT130I	CCWGG	1 cut(s)	213
BclI	TGATCA	1 cut(s)	847
BcnI	CCSGG	1 cut(s)	322
BcoDI	GTCTC	3 cut(s)	148, 694, 867
BfaI	CTAG	3 cut(s)	386, 570, 716
BfmI	CTRYAG	1 cut(s)	835
BfuAI	ACCTGC	1 cut(s)	1130
BisI	GCNGC	5 cut(s)	57, 638, 835, 1242, 1292
BlsI	GCNGC	5 cut(s)	58, 639, 836, 1243, 1293
BmcAI	AGTACT	1 cut(s)	659
Bme1390I	CCNGG	2 cut(s)	213, 322
Bme18I	GGWCC	3 cut(s)	104, 421, 643
BmeT110I	CYCGRG	1 cut(s)	681
BmgT120I	GGNCC	4 cut(s)	104, 421, 643, 1194
BmiI	GGNNCC	4 cut(s)	106, 422, 645, 1117
BmrFI	CCNGG	2 cut(s)	213, 322
BmrI	ACTGGG	1 cut(s)	1121
BmsI	GCATC	8 cut(s)	58, 82, 95, 191, 217, 1129, 1151, 1228
BmuI	ACTGGG	1 cut(s)	1121
BpmI	CTGGAG	1 cut(s)	6
Bpu10I	CCTNAGC	2 cut(s)	126, 1104
BpuEI	CTTGAG	2 cut(s)	172, 1280
BpuMI	CCSGG	1 cut(s)	322
BsaJI	CCNNGG	1 cut(s)	1065
BsaWI	WCCGGW	1 cut(s)	488
Bsc4I	CCNNNNNNNGG	3 cut(s)	417, 537, 1066
Bse1I	ACTGG	5 cut(s)	23, 258, 268, 513, 1116
Bse3DI	GCAATG	2 cut(s)	487, 1170
BseAI	TCCGGA	1 cut(s)	488
BseBI	CCWGG	1 cut(s)	213
BseDI	CCNNGG	1 cut(s)	1065
BseLI	CCNNNNNNNGG	3 cut(s)	417, 537, 1066
BseMI	GCAATG	2 cut(s)	487, 1170
BseMII	CTCAG	4 cut(s)	117, 407, 527, 1095
BseNI	ACTGG	5 cut(s)	23, 258, 268, 513, 1116
BseRI	GAGGAG	1 cut(s)	449
BseSI	GKGCMC	1 cut(s)	907
BseXI	GCAGC	5 cut(s)	43, 624, 821, 1253, 1303
BseYI	CCCAGC	1 cut(s)	107
BshFI	GGCC	4 cut(s)	541, 632, 778, 1196
BsiHKCI	CYCGRG	1 cut(s)	681
BsiSI	CCGG	2 cut(s)	322, 489
BslFI	GGGAC	1 cut(s)	434
BslI	CCNNNNNNNGG	3 cut(s)	417, 537, 1066
BsmAI	GTCTC	3 cut(s)	148, 694, 867
BsmFI	GGGAC	1 cut(s)	434
BsmI	GAATGC	3 cut(s)	59, 206, 775
BsnI	GGCC	4 cut(s)	541, 632, 778, 1196
BsoBI	CYCGRG	1 cut(s)	681
Bsp1286I	GDGCHC	1 cut(s)	907
Bsp13I	TCCGGA	1 cut(s)	488
Bsp1407I	TGTACA	1 cut(s)	588
Bsp143I	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
BspACI	CCGC	1 cut(s)	361
BspANI	GGCC	4 cut(s)	541, 632, 778, 1196
BspCNI	CTCAG	4 cut(s)	118, 408, 528, 1096
BspEI	TCCGGA	1 cut(s)	488
BspLI	GGNNCC	4 cut(s)	106, 422, 645, 1117
BspMAI	CTGCAG	1 cut(s)	839
BspMI	ACCTGC	1 cut(s)	1130
BspPI	GGATC	1 cut(s)	223
BsrDI	GCAATG	2 cut(s)	487, 1170
BsrGI	TGTACA	1 cut(s)	588
BsrI	ACTGG	5 cut(s)	23, 258, 268, 513, 1116
BssECI	CCNNGG	1 cut(s)	1065
BssMI	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
BssT1I	CCWWGG	1 cut(s)	1065
Bst2UI	CCWGG	1 cut(s)	213
Bst4CI	ACNGT	2 cut(s)	697, 916
Bst6I	CTCTTC	4 cut(s)	471, 872, 1266, 1311
BstAPI	GCANNNNNTGC	1 cut(s)	92
BstAUI	TGTACA	1 cut(s)	588
BstC8I	GCNNGC	4 cut(s)	206, 359, 839, 942
BstDEI	CTNAG	4 cut(s)	126, 416, 536, 1104
BstHHI	GCGC	2 cut(s)	940, 1127
BstKTI	GATC	6 cut(s)	52, 218, 385, 670, 850, 1084
BstMAI	GTCTC	3 cut(s)	148, 694, 867
BstMBI	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
BstMWI	GCNNNNNNNGC	5 cut(s)	92, 358, 1124, 1193, 1300
BstNI	CCWGG	1 cut(s)	213
BstNSI	RCATGY	1 cut(s)	944
BstSCI	CCNGG	2 cut(s)	211, 320
BstSFI	CTRYAG	1 cut(s)	835
BstSLI	GKGCMC	1 cut(s)	907
BstV1I	GCAGC	5 cut(s)	43, 624, 821, 1253, 1303
BstXI	CCANNNNNNTGG	1 cut(s)	640
BsuRI	GGCC	4 cut(s)	541, 632, 778, 1196
BtsI	GCAGTG	1 cut(s)	395
BtsIMutI	CAGTG	3 cut(s)	395, 702, 1152
BveI	ACCTGC	1 cut(s)	1130
Cac8I	GCNNGC	4 cut(s)	206, 359, 839, 942
CfoI	GCGC	2 cut(s)	940, 1127
Cfr13I	GGNCC	4 cut(s)	104, 421, 643, 1194
Csp6I	GTAC	2 cut(s)	589, 658
CspCI	CAANNNNNGTGG	4 cut(s)	1116, 1151, 1152, 1187
CviAII	CATG	2 cut(s)	704, 941
CviQI	GTAC	2 cut(s)	589, 658
DdeI	CTNAG	4 cut(s)	126, 416, 536, 1104
DpnI	GATC	6 cut(s)	51, 217, 384, 669, 849, 1083
DpnII	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
DraIII	CACNNNGTG	1 cut(s)	1159
EaeI	YGGCCR	2 cut(s)	630, 776
Eam1104I	CTCTTC	4 cut(s)	471, 872, 1266, 1311
EarI	CTCTTC	4 cut(s)	471, 872, 1266, 1311
Eco130I	CCWWGG	1 cut(s)	1065
Eco32I	GATATC	1 cut(s)	815
Eco47I	GGWCC	3 cut(s)	104, 421, 643
Eco88I	CYCGRG	1 cut(s)	681
EcoO109I	RGGNCCY	1 cut(s)	421
EcoRII	CCWGG	1 cut(s)	211
EcoRV	GATATC	1 cut(s)	815
EcoT14I	CCWWGG	1 cut(s)	1065
EcoT22I	ATGCAT	1 cut(s)	1144
ErhI	CCWWGG	1 cut(s)	1065
FaeI	CATG	2 cut(s)	707, 944
FalI	AAGNNNNNCTT	2 cut(s)	1008, 1040
FaqI	GGGAC	1 cut(s)	434
FatI	CATG	2 cut(s)	703, 940
FbaI	TGATCA	1 cut(s)	847
Fnu4HI	GCNGC	5 cut(s)	57, 638, 835, 1242, 1292
Fsp4HI	GCNGC	5 cut(s)	57, 638, 835, 1242, 1292
FspBI	CTAG	3 cut(s)	386, 570, 716
FspI	TGCGCA	1 cut(s)	1126
GlaI	GCGC	2 cut(s)	939, 1126
GluI	GCNGC	5 cut(s)	57, 638, 835, 1242, 1292
GsaI	CCCAGC	1 cut(s)	111
GsuI	CTGGAG	1 cut(s)	6
HaeIII	GGCC	4 cut(s)	541, 632, 778, 1196
HapII	CCGG	2 cut(s)	322, 489
HhaI	GCGC	2 cut(s)	940, 1127
Hin1II	CATG	2 cut(s)	707, 944
Hin6I	GCGC	2 cut(s)	938, 1125
HinP1I	GCGC	2 cut(s)	938, 1125
HinfI	GANTC	8 cut(s)	17, 80, 140, 332, 338, 345, 712, 751
HpaII	CCGG	2 cut(s)	322, 489
HphI	GGTGA	2 cut(s)	677, 1076
Hpy166II	GTNNAC	3 cut(s)	245, 550, 893
Hpy188I	TCNGA	4 cut(s)	91, 337, 750, 871
Hpy8I	GTNNAC	3 cut(s)	245, 550, 893
HpyAV	CCTTC	2 cut(s)	962, 1177
HpyCH4III	ACNGT	2 cut(s)	697, 916
HpyCH4IV	ACGT	1 cut(s)	1155
HpyF10VI	GCNNNNNNNGC	5 cut(s)	92, 358, 1124, 1193, 1300
HpyF3I	CTNAG	4 cut(s)	126, 416, 536, 1104
HpySE526I	ACGT	1 cut(s)	1155
Hsp92II	CATG	2 cut(s)	707, 944
HspAI	GCGC	2 cut(s)	938, 1125
Kpn2I	TCCGGA	1 cut(s)	488
Ksp22I	TGATCA	1 cut(s)	847
Kzo9I	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
LmnI	GCTCC	2 cut(s)	166, 1115
Lsp1109I	GCAGC	5 cut(s)	43, 624, 821, 1253, 1303
LweI	GCATC	8 cut(s)	58, 82, 95, 191, 217, 1129, 1151, 1228
MaeI	CTAG	3 cut(s)	386, 570, 716
MaeII	ACGT	1 cut(s)	1155
MaeIII	GTNAC	2 cut(s)	44, 1147
MalI	GATC	6 cut(s)	51, 217, 384, 669, 849, 1083
MboI	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
MfeI	CAATTG	1 cut(s)	1304
MhlI	GDGCHC	1 cut(s)	907
MlsI	TGGCCA	2 cut(s)	632, 778
MluCI	AATT	6 cut(s)	74, 512, 613, 793, 1246, 1304
MluNI	TGGCCA	2 cut(s)	632, 778
MlyI	GAGTC	2 cut(s)	74, 721
MmeI	TCCRAC	1 cut(s)	144
Mox20I	TGGCCA	2 cut(s)	632, 778
Mph1103I	ATGCAT	1 cut(s)	1144
MroI	TCCGGA	1 cut(s)	488
MscI	TGGCCA	2 cut(s)	632, 778
MseI	TTAA	3 cut(s)	149, 995, 1026
Msp20I	TGGCCA	2 cut(s)	632, 778
MspA1I	CMGCKG	1 cut(s)	361
MspI	CCGG	2 cut(s)	322, 489
MspR9I	CCNGG	2 cut(s)	213, 322
MunI	CAATTG	1 cut(s)	1304
Mva1269I	GAATGC	3 cut(s)	59, 206, 775
MvaI	CCWGG	1 cut(s)	213
MwoI	GCNNNNNNNGC	5 cut(s)	92, 358, 1124, 1193, 1300
NciI	CCSGG	1 cut(s)	322
NdeII	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
NlaIII	CATG	2 cut(s)	707, 944
NlaIV	GGNNCC	4 cut(s)	106, 422, 645, 1117
NmuCI	GTSAC	2 cut(s)	44, 1147
NsbI	TGCGCA	1 cut(s)	1126
NsiI	ATGCAT	1 cut(s)	1144
NspI	RCATGY	1 cut(s)	944
PaeI	GCATGC	1 cut(s)	944
PaqCI	CACCTGC	1 cut(s)	1130
PctI	GAATGC	3 cut(s)	59, 206, 775
PfeI	GAWTC	6 cut(s)	17, 140, 332, 338, 345, 751
PfoI	TCCNGGA	1 cut(s)	211
PkrI	GCNGC	5 cut(s)	58, 639, 836, 1243, 1293
PleI	GAGTC	2 cut(s)	74, 720
PpsI	GAGTC	2 cut(s)	74, 720
PpuMI	RGGWCCY	1 cut(s)	421
Psp5II	RGGWCCY	1 cut(s)	421
Psp6I	CCWGG	1 cut(s)	211
PspFI	CCCAGC	1 cut(s)	107
PspGI	CCWGG	1 cut(s)	211
PspN4I	GGNNCC	4 cut(s)	106, 422, 645, 1117
PspPI	GGNCC	4 cut(s)	104, 421, 643, 1194
PspPPI	RGGWCCY	1 cut(s)	421
PstI	CTGCAG	1 cut(s)	839
RsaI	GTAC	2 cut(s)	590, 659
RsaNI	GTAC	2 cut(s)	589, 658
SaqAI	TTAA	3 cut(s)	149, 995, 1026
SatI	GCNGC	5 cut(s)	57, 638, 835, 1242, 1292
Sau3AI	GATC	6 cut(s)	49, 215, 382, 667, 847, 1081
Sau96I	GGNCC	4 cut(s)	104, 421, 643, 1194
ScaI	AGTACT	1 cut(s)	659
SchI	GAGTC	2 cut(s)	74, 721
ScrFI	CCNGG	2 cut(s)	213, 322
SduI	GDGCHC	1 cut(s)	907
SfaNI	GCATC	8 cut(s)	58, 82, 95, 191, 217, 1129, 1151, 1228
SfcI	CTRYAG	1 cut(s)	835
SinI	GGWCC	3 cut(s)	104, 421, 643
SmlI	CTYRAG	2 cut(s)	187, 1295
SmoI	CTYRAG	2 cut(s)	187, 1295
SphI	GCATGC	1 cut(s)	944
Sse9I	AATT	6 cut(s)	74, 512, 613, 793, 1246, 1304
SsiI	CCGC	1 cut(s)	361
SspMI	CTAG	3 cut(s)	386, 570, 716
StyD4I	CCNGG	2 cut(s)	211, 320
StyI	CCWWGG	1 cut(s)	1065
TaaI	ACNGT	2 cut(s)	697, 916
TaiI	ACGT	1 cut(s)	1158
TaqI	TCGA	3 cut(s)	341, 381, 830
TasI	AATT	6 cut(s)	74, 512, 613, 793, 1246, 1304
TatI	WGTACW	2 cut(s)	588, 657
TfiI	GAWTC	6 cut(s)	17, 140, 332, 338, 345, 751
Tru1I	TTAA	3 cut(s)	149, 995, 1026
Tru9I	TTAA	3 cut(s)	149, 995, 1026
TscAI	CASTG	3 cut(s)	402, 702, 1152
TseFI	GTSAC	2 cut(s)	44, 1147
TseI	GCWGC	5 cut(s)	56, 637, 834, 1241, 1291
Tsp45I	GTSAC	2 cut(s)	44, 1147
TspDTI	ATGAA	9 cut(s)	17, 21, 261, 321, 327, 720, 981, 1211, 1274
TspGWI	ACGGA	1 cut(s)	1145
TspRI	CASTG	3 cut(s)	402, 702, 1152
VpaK11BI	GGWCC	3 cut(s)	104, 421, 643
XapI	RAATTY	1 cut(s)	512
XbaI	TCTAGA	2 cut(s)	385, 715
XceI	RCATGY	1 cut(s)	944
XspI	CTAG	3 cut(s)	386, 570, 716
ZrmI	AGTACT	1 cut(s)	659
Zsp2I	ATGCAT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.