Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Forward (+)

39253680 .. 39255505

Gene Structure 1826 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24842

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGATGAGTGTGGCTACTGTGTCTCCGATTTTACATAATATTGATAACCGTGTTGGGTATCTTAAGAGGGGACTAGGGTTAGATTCTGATTACAGTGACCTAGGAGTGATAGATCAGAGGGCCAAAAGGCTTAAGGTAGAGACTGATGTGCTGGGAGTTTCAGAAGAGGCTAGGTTTGCTTTTGATGAAAAACCCAGGTTTTCTGAAGTGAGATTTGGGTATATACCTAAGGGGTTATTGCTTAGGAGTGATGAAATTGATCGATTACGCAGCGAAAACACTAGGAATCTATTGTTGAACCATAAGAAACTTCATCTGGTTCTTGATCTCGACCACACCCTGCTGAATACCACTTTCCTTGATGAGATGTCACCCGACGAAGAATATCTGAAGACCCAAACCCAGTCTGATCATTCTCTGCAGTATGTTCACGTTGTTGACACTCCCAGTAGGCAATTGATGACCAAGTTGAGGCCTTATATCAGGACGTTTTTGGTGCAAGCCAGTCAAATGTTTGAGCTGTCCATATACACAATGGGTAATCGAGATTATGCGCTAGAAATGGCTAAGCTGCTTGATCCAGGAAATCATATCTTTGGTGGTAGAGTCATATCGCGTGATGATAGCACAGAAACAGATAGAAAGAGTCTAGATGTCCTGCTTGCCCGAGATTCTGCTGTTGTGATCCTTGATGATACGAAAAATGTATGGACAAATGACAACAGGGACAATGTAATAGTGATGCCTAGGTACCATTTCTTTAGATCTAGTTGTCAAAAGTTTCGCCTCAGTAAGGGTATGCCTTATTCTGAGCTGAAGACTGATGAATGTGATCGTTATGGAGGAGCTTATCTTGCAAATGTACTACGACTTCTTGGGTATATCCACACCATATTCTTTAATGAAGTTGAGTTACAGGGGTGGGATCTTATCGACAGAGATGTGAGGCTTGTCTTGAAAATCCTTAAGAAGGAAGTCTTGAAGGGCTGTAAAATTGTTTTCAGCCATGTATTCCCCTCAAATGTCGAAGCTAATACTCATCCTTTGTGGAAGATGGCGGAGCAGCTGGGCGCTACTTGTTCAACACAAGTCGATCCATCAGTCACACATGTAGTTGCAGCAAATGCTCGAACACAGAAATCGTGTTGGGCAGTTAAAGAAAGAAAGTTTTTGGTGAATCCCCAATGGATTCGTTCTGCAAATTTTATGTGGCAAAAGCAACCTGAAGATAATTTTCCCTGTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

415

Amino Acids

47.91

Weight (kDa)

7.19

Isoelectric Point (pI)

39.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	105 - 265	2e-24	NLI interacting factor-like phosphatase
BRCT	PF00533	325 - 398	5.3e-09	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	346 - 396	6.6e-06	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	750
AccB1I	GGYRCC	1 cut(s)	750
AccII	CGCG	1 cut(s)	616
AciI	CCGC	1 cut(s)	1058
AclWI	GGATC	4 cut(s)	572, 679, 933, 1088
AcsI	RAATTY	1 cut(s)	1201
AcuI	CTGAAG	4 cut(s)	225, 410, 836, 1245
AfaI	GTAC	2 cut(s)	752, 864
AfiI	CCNNNNNNNGG	3 cut(s)	471, 793, 970
AflII	CTTAAG	3 cut(s)	62, 131, 965
AflIII	ACRYGT	1 cut(s)	1108
AgsI	TTSAA	4 cut(s)	298, 958, 982, 1083
AjnI	CCWGG	2 cut(s)	194, 580
AjuI	GAANNNNNNNTTGG	2 cut(s)	198, 230
AluBI	AGCT	6 cut(s)	520, 571, 814, 848, 1031, 1066
AluI	AGCT	6 cut(s)	520, 571, 814, 848, 1031, 1066
Alw26I	GTCTC	2 cut(s)	27, 134
AlwI	GGATC	4 cut(s)	572, 679, 933, 1088
Ama87I	CYCGRG	1 cut(s)	666
AoxI	GGCC	2 cut(s)	120, 473
ApeKI	GCWGC	4 cut(s)	270, 571, 1063, 1118
ApoI	RAATTY	1 cut(s)	1201
Asp718I	GGTACC	1 cut(s)	750
AspA2I	CCTAGG	2 cut(s)	100, 746
AspLEI	GCGC	2 cut(s)	556, 1073
AspS9I	GGNCC	1 cut(s)	120
AsuHPI	GGTGA	2 cut(s)	363, 1186
AvaI	CYCGRG	1 cut(s)	666
AvrII	CCTAGG	2 cut(s)	100, 746
AxyI	CCTNAGG	1 cut(s)	228
BanI	GGYRCC	1 cut(s)	750
BarI	GAAGNNNNNNTAC	4 cut(s)	855, 887, 897, 929
BbsI	GAAGAC	2 cut(s)	398, 824
BbvI	GCAGC	4 cut(s)	282, 558, 1075, 1130
BccI	CCATC	2 cut(s)	1048, 1105
BciT130I	CCWGG	2 cut(s)	196, 582
BclI	TGATCA	1 cut(s)	409
BcoDI	GTCTC	2 cut(s)	27, 134
BfaI	CTAG	8 cut(s)	74, 101, 171, 282, 557, 650, 747, 768
BfmI	CTRYAG	1 cut(s)	419
BfoI	RGCGCY	1 cut(s)	1074
BfrI	CTTAAG	3 cut(s)	62, 131, 965
BglII	AGATCT	1 cut(s)	764
BisI	GCNGC	4 cut(s)	271, 572, 1064, 1119
BlnI	CCTAGG	2 cut(s)	100, 746
BlpI	GCTNAGC	1 cut(s)	567
BlsI	GCNGC	4 cut(s)	272, 573, 1065, 1120
Bme1390I	CCNGG	2 cut(s)	196, 582
BmeT110I	CYCGRG	1 cut(s)	666
BmgT120I	GGNCC	1 cut(s)	120
BmiI	GGNNCC	1 cut(s)	752
BmrFI	CCNGG	2 cut(s)	196, 582
BmrI	ACTGGG	2 cut(s)	397, 441
BmsI	GCATC	1 cut(s)	732
BmuI	ACTGGG	2 cut(s)	397, 441
BpiI	GAAGAC	2 cut(s)	398, 824
Bpu10I	CCTNAGC	1 cut(s)	242
Bpu1102I	GCTNAGC	1 cut(s)	567
Bsa29I	ATCGAT	1 cut(s)	262
BsaJI	CCNNGG	3 cut(s)	100, 194, 746
BsaXI	ACNNNNNCTCC	2 cut(s)	7, 37
Bsc4I	CCNNNNNNNGG	3 cut(s)	471, 793, 970
Bse1I	ACTGG	3 cut(s)	403, 447, 504
Bse21I	CCTNAGG	1 cut(s)	228
BseBI	CCWGG	2 cut(s)	196, 582
BseCI	ATCGAT	1 cut(s)	262
BseDI	CCNNGG	3 cut(s)	100, 194, 746
BseGI	GGATG	1 cut(s)	1039
BseLI	CCNNNNNNNGG	3 cut(s)	471, 793, 970
BseMII	CTCAG	2 cut(s)	801, 802
BseNI	ACTGG	3 cut(s)	403, 447, 504
BseRI	GAGGAG	1 cut(s)	858
BseXI	GCAGC	4 cut(s)	282, 558, 1075, 1130
BseYI	CCCAGC	2 cut(s)	151, 1066
Bsh1236I	CGCG	1 cut(s)	616
BshFI	GGCC	2 cut(s)	122, 475
BshNI	GGYRCC	1 cut(s)	750
BshVI	ATCGAT	1 cut(s)	262
BsiHKCI	CYCGRG	1 cut(s)	666
BslFI	GGGAC	2 cut(s)	84, 740
BslI	CCNNNNNNNGG	3 cut(s)	471, 793, 970
BsmAI	GTCTC	2 cut(s)	27, 134
BsmFI	GGGAC	2 cut(s)	84, 740
BsnI	GGCC	2 cut(s)	122, 475
BsoBI	CYCGRG	1 cut(s)	666
Bsp1720I	GCTNAGC	1 cut(s)	567
BspACI	CCGC	1 cut(s)	1058
BspANI	GGCC	2 cut(s)	122, 475
BspCNI	CTCAG	2 cut(s)	801, 802
BspDI	ATCGAT	1 cut(s)	262
BspFNI	CGCG	1 cut(s)	616
BspLI	GGNNCC	1 cut(s)	752
BspMAI	CTGCAG	1 cut(s)	423
BspPI	GGATC	4 cut(s)	572, 679, 933, 1088
BspT107I	GGYRCC	1 cut(s)	750
BspTI	CTTAAG	3 cut(s)	62, 131, 965
BsrI	ACTGG	3 cut(s)	403, 447, 504
BssECI	CCNNGG	3 cut(s)	100, 194, 746
BssT1I	CCWWGG	2 cut(s)	100, 746
Bst2UI	CCWGG	2 cut(s)	196, 582
Bst4CI	ACNGT	3 cut(s)	19, 50, 95
Bst6I	CTCTTC	1 cut(s)	159
BstAFI	CTTAAG	3 cut(s)	62, 131, 965
BstAPI	GCANNNNNTGC	1 cut(s)	1124
BstC8I	GCNNGC	2 cut(s)	501, 663
BstDEI	CTNAG	5 cut(s)	228, 242, 567, 788, 810
BstENI	CCTNNNNNAGG	2 cut(s)	791, 968
BstF5I	GGATG	1 cut(s)	1039
BstFNI	CGCG	1 cut(s)	616
BstH2I	RGCGCY	1 cut(s)	1074
BstHHI	GCGC	2 cut(s)	556, 1073
BstMAI	GTCTC	2 cut(s)	27, 134
BstMWI	GCNNNNNNNGC	3 cut(s)	176, 854, 1124
BstNI	CCWGG	2 cut(s)	196, 582
BstNSI	RCATGY	1 cut(s)	1112
BstSCI	CCNGG	2 cut(s)	194, 580
BstSFI	CTRYAG	1 cut(s)	419
BstUI	CGCG	1 cut(s)	616
BstV1I	GCAGC	4 cut(s)	282, 558, 1075, 1130
BstV2I	GAAGAC	2 cut(s)	398, 824
BstX2I	RGATCY	2 cut(s)	764, 925
BstYI	RGATCY	2 cut(s)	764, 925
Bsu15I	ATCGAT	1 cut(s)	262
Bsu36I	CCTNAGG	1 cut(s)	228
BsuRI	GGCC	2 cut(s)	122, 475
BsuTUI	ATCGAT	1 cut(s)	262
BtsCI	GGATG	1 cut(s)	1039
BtsIMutI	CAGTG	1 cut(s)	100
Cac8I	GCNNGC	2 cut(s)	501, 663
CfoI	GCGC	2 cut(s)	556, 1073
Cfr13I	GGNCC	1 cut(s)	120
ClaI	ATCGAT	1 cut(s)	262
Csp6I	GTAC	2 cut(s)	751, 863
CspCI	CAANNNNNGTGG	2 cut(s)	340, 375
CviAII	CATG	2 cut(s)	1007, 1109
CviQI	GTAC	2 cut(s)	751, 863
DdeI	CTNAG	5 cut(s)	228, 242, 567, 788, 810
Eam1104I	CTCTTC	1 cut(s)	159
EarI	CTCTTC	1 cut(s)	159
EciI	GGCGGA	1 cut(s)	1073
Eco130I	CCWWGG	2 cut(s)	100, 746
Eco147I	AGGCCT	1 cut(s)	475
Eco57I	CTGAAG	4 cut(s)	225, 410, 836, 1245
Eco81I	CCTNAGG	1 cut(s)	228
Eco88I	CYCGRG	1 cut(s)	666
EcoNI	CCTNNNNNAGG	2 cut(s)	791, 968
EcoRII	CCWGG	2 cut(s)	194, 580
EcoT14I	CCWWGG	2 cut(s)	100, 746
ErhI	CCWWGG	2 cut(s)	100, 746
FaeI	CATG	2 cut(s)	1010, 1112
FalI	AAGNNNNNCTT	2 cut(s)	962, 994
FaqI	GGGAC	2 cut(s)	84, 740
FatI	CATG	2 cut(s)	1006, 1108
FbaI	TGATCA	1 cut(s)	409
Fnu4HI	GCNGC	4 cut(s)	271, 572, 1064, 1119
FokI	GGATG	1 cut(s)	1026
Fsp4HI	GCNGC	4 cut(s)	271, 572, 1064, 1119
FspBI	CTAG	8 cut(s)	74, 101, 171, 282, 557, 650, 747, 768
GlaI	GCGC	2 cut(s)	555, 1072
GluI	GCNGC	4 cut(s)	271, 572, 1064, 1119
GsaI	CCCAGC	2 cut(s)	155, 1070
HaeII	RGCGCY	1 cut(s)	1074
HaeIII	GGCC	2 cut(s)	122, 475
HhaI	GCGC	2 cut(s)	556, 1073
Hin1II	CATG	2 cut(s)	1010, 1112
Hin6I	GCGC	2 cut(s)	554, 1071
HinP1I	GCGC	2 cut(s)	554, 1071
HincII	GTYRAC	1 cut(s)	439
HindII	GTYRAC	1 cut(s)	439
HinfI	GANTC	7 cut(s)	83, 286, 606, 646, 671, 1177, 1189
HphI	GGTGA	2 cut(s)	363, 1186
Hpy166II	GTNNAC	2 cut(s)	430, 439
Hpy188I	TCNGA	8 cut(s)	27, 88, 117, 163, 205, 390, 409, 811
Hpy188III	TCNNGA	7 cut(s)	323, 329, 484, 545, 650, 955, 979
Hpy8I	GTNNAC	2 cut(s)	430, 439
Hpy99I	CGWCG	1 cut(s)	380
HpyAV	CCTTC	2 cut(s)	964, 976
HpyCH4III	ACNGT	3 cut(s)	19, 50, 95
HpyCH4IV	ACGT	2 cut(s)	432, 488
HpyCH4V	TGCA	5 cut(s)	421, 499, 857, 1118, 1199
HpyF10VI	GCNNNNNNNGC	3 cut(s)	176, 854, 1124
HpyF3I	CTNAG	5 cut(s)	228, 242, 567, 788, 810
HpySE526I	ACGT	2 cut(s)	432, 488
Hsp92II	CATG	2 cut(s)	1010, 1112
HspAI	GCGC	2 cut(s)	554, 1071
KpnI	GGTACC	1 cut(s)	754
Ksp22I	TGATCA	1 cut(s)	409
LmnI	GCTCC	2 cut(s)	845, 1060
Lsp1109I	GCAGC	4 cut(s)	282, 558, 1075, 1130
LweI	GCATC	1 cut(s)	732
MaeI	CTAG	8 cut(s)	74, 101, 171, 282, 557, 650, 747, 768
MaeII	ACGT	2 cut(s)	432, 488
MaeIII	GTNAC	4 cut(s)	95, 369, 912, 1102
MboII	GAAGA	6 cut(s)	176, 392, 403, 829, 1063, 1238
MfeI	CAATTG	1 cut(s)	455
MflI	RGATCY	2 cut(s)	764, 925
MluCI	AATT	5 cut(s)	255, 455, 993, 1201, 1231
MlyI	GAGTC	2 cut(s)	615, 655
MnlI	CCTC	8 cut(s)	60, 111, 160, 465, 797, 836, 939, 1027
MseI	TTAA	5 cut(s)	63, 132, 900, 966, 1155
MspA1I	CMGCKG	1 cut(s)	1066
MspCI	CTTAAG	3 cut(s)	62, 131, 965
MspR9I	CCNGG	2 cut(s)	196, 582
MunI	CAATTG	1 cut(s)	455
MvaI	CCWGG	2 cut(s)	196, 582
MvnI	CGCG	1 cut(s)	616
MwoI	GCNNNNNNNGC	3 cut(s)	176, 854, 1124
NlaIII	CATG	2 cut(s)	1010, 1112
NlaIV	GGNNCC	1 cut(s)	752
NmuCI	GTSAC	3 cut(s)	95, 369, 1102
NspI	RCATGY	1 cut(s)	1112
PceI	AGGCCT	1 cut(s)	475
PciI	ACATGT	1 cut(s)	1108
PfeI	GAWTC	5 cut(s)	83, 286, 671, 1177, 1189
PfoI	TCCNGGA	1 cut(s)	580
PkrI	GCNGC	4 cut(s)	272, 573, 1065, 1120
PleI	GAGTC	2 cut(s)	614, 654
PpsI	GAGTC	2 cut(s)	614, 654
PscI	ACATGT	1 cut(s)	1108
Psp6I	CCWGG	2 cut(s)	194, 580
PspFI	CCCAGC	2 cut(s)	151, 1066
PspGI	CCWGG	2 cut(s)	194, 580
PspN4I	GGNNCC	1 cut(s)	752
PspPI	GGNCC	1 cut(s)	120
PstI	CTGCAG	1 cut(s)	423
PsuI	RGATCY	2 cut(s)	764, 925
PvuII	CAGCTG	1 cut(s)	1066
RsaI	GTAC	2 cut(s)	752, 864
RsaNI	GTAC	2 cut(s)	751, 863
SaqAI	TTAA	5 cut(s)	63, 132, 900, 966, 1155
SatI	GCNGC	4 cut(s)	271, 572, 1064, 1119
Sau96I	GGNCC	1 cut(s)	120
SchI	GAGTC	2 cut(s)	615, 655
ScrFI	CCNGG	2 cut(s)	196, 582
SfaNI	GCATC	1 cut(s)	732
SfcI	CTRYAG	1 cut(s)	419
SmlI	CTYRAG	3 cut(s)	62, 131, 965
SmoI	CTYRAG	3 cut(s)	62, 131, 965
Sse9I	AATT	5 cut(s)	255, 455, 993, 1201, 1231
SseBI	AGGCCT	1 cut(s)	475
SsiI	CCGC	1 cut(s)	1058
SspI	AATATT	1 cut(s)	40
SspMI	CTAG	8 cut(s)	74, 101, 171, 282, 557, 650, 747, 768
StuI	AGGCCT	1 cut(s)	475
StyD4I	CCNGG	2 cut(s)	194, 580
StyI	CCWWGG	2 cut(s)	100, 746
TaaI	ACNGT	3 cut(s)	19, 50, 95
TaiI	ACGT	2 cut(s)	435, 491
TaqI	TCGA	7 cut(s)	262, 330, 544, 933, 1026, 1092, 1129
TasI	AATT	5 cut(s)	255, 455, 993, 1201, 1231
TatI	WGTACW	1 cut(s)	862
TfiI	GAWTC	5 cut(s)	83, 286, 671, 1177, 1189
Tru1I	TTAA	5 cut(s)	63, 132, 900, 966, 1155
Tru9I	TTAA	5 cut(s)	63, 132, 900, 966, 1155
TscAI	CASTG	1 cut(s)	100
TseFI	GTSAC	3 cut(s)	95, 369, 1102
TseI	GCWGC	4 cut(s)	270, 571, 1063, 1118
Tsp45I	GTSAC	3 cut(s)	95, 369, 1102
TspDTI	ATGAA	5 cut(s)	201, 267, 302, 840, 918
TspRI	CASTG	1 cut(s)	100
Vha464I	CTTAAG	3 cut(s)	62, 131, 965
XagI	CCTNNNNNAGG	2 cut(s)	791, 968
XapI	RAATTY	1 cut(s)	1201
XbaI	TCTAGA	1 cut(s)	649
XceI	RCATGY	1 cut(s)	1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	532
XmaJI	CCTAGG	2 cut(s)	100, 746
XspI	CTAG	8 cut(s)	74, 101, 171, 282, 557, 650, 747, 768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.