RNA polymerase II C-terminal domain phosphatase-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 660 |
| AccI | GTMKAC | 1 cut(s) | 11 |
| AccII | CGCG | 1 cut(s) | 610 |
| AciI | CCGC | 1 cut(s) | 1052 |
| AclWI | GGATC | 4 cut(s) | 566, 673, 927, 1082 |
| AcsI | RAATTY | 2 cut(s) | 864, 1195 |
| AcuI | CTGAAG | 3 cut(s) | 219, 404, 1239 |
| AfaI | GTAC | 2 cut(s) | 858, 1189 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 465, 787, 964 |
| AflII | CTTAAG | 2 cut(s) | 59, 128 |
| AflIII | ACRYGT | 1 cut(s) | 1102 |
| AgeI | ACCGGT | 1 cut(s) | 828 |
| AgsI | TTSAA | 6 cut(s) | 292, 811, 863, 952, 976, 1077 |
| AjnI | CCWGG | 1 cut(s) | 188 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 192, 224 |
| AluBI | AGCT | 5 cut(s) | 514, 565, 842, 1025, 1060 |
| AluI | AGCT | 5 cut(s) | 514, 565, 842, 1025, 1060 |
| Alw26I | GTCTC | 2 cut(s) | 22, 131 |
| AlwI | GGATC | 4 cut(s) | 566, 673, 927, 1082 |
| AoxI | GGCC | 2 cut(s) | 467, 778 |
| ApeKI | GCWGC | 3 cut(s) | 565, 1057, 1112 |
| ApoI | RAATTY | 2 cut(s) | 864, 1195 |
| AsiGI | ACCGGT | 1 cut(s) | 828 |
| AspA2I | CCTAGG | 1 cut(s) | 97 |
| AspLEI | GCGC | 3 cut(s) | 550, 661, 1067 |
| AspS9I | GGNCC | 1 cut(s) | 480 |
| AsuC2I | CCSGG | 1 cut(s) | 576 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 357, 1180 |
| AvaII | GGWCC | 1 cut(s) | 480 |
| AvrII | CCTAGG | 1 cut(s) | 97 |
| AxyI | CCTNAGG | 1 cut(s) | 959 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 891, 923 |
| BbsI | GAAGAC | 2 cut(s) | 392, 818 |
| BbvI | GCAGC | 3 cut(s) | 552, 1069, 1124 |
| BccI | CCATC | 2 cut(s) | 1042, 1099 |
| BciT130I | CCWGG | 1 cut(s) | 190 |
| BclI | TGATCA | 1 cut(s) | 403 |
| BcnI | CCSGG | 1 cut(s) | 576 |
| BcoDI | GTCTC | 2 cut(s) | 22, 131 |
| BfaI | CTAG | 7 cut(s) | 98, 276, 323, 551, 644, 741, 762 |
| BfmI | CTRYAG | 1 cut(s) | 413 |
| BfoI | RGCGCY | 1 cut(s) | 1068 |
| BfrI | CTTAAG | 2 cut(s) | 59, 128 |
| BglII | AGATCT | 1 cut(s) | 758 |
| BisI | GCNGC | 3 cut(s) | 566, 1058, 1113 |
| BlnI | CCTAGG | 1 cut(s) | 97 |
| BlpI | GCTNAGC | 1 cut(s) | 561 |
| BlsI | GCNGC | 3 cut(s) | 567, 1059, 1114 |
| Bme1390I | CCNGG | 2 cut(s) | 190, 576 |
| Bme18I | GGWCC | 1 cut(s) | 480 |
| BmgT120I | GGNCC | 1 cut(s) | 480 |
| BmrFI | CCNGG | 2 cut(s) | 190, 576 |
| BmrI | ACTGGG | 2 cut(s) | 391, 435 |
| BmsI | GCATC | 1 cut(s) | 726 |
| BmuI | ACTGGG | 2 cut(s) | 391, 435 |
| BpiI | GAAGAC | 2 cut(s) | 392, 818 |
| Bpu10I | CCTNAGC | 1 cut(s) | 236 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 561 |
| BpuMI | CCSGG | 1 cut(s) | 576 |
| Bsa29I | ATCGAT | 1 cut(s) | 256 |
| BsaJI | CCNNGG | 3 cut(s) | 97, 188, 222 |
| BsaWI | WCCGGW | 2 cut(s) | 367, 828 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 465, 787, 964 |
| Bse118I | RCCGGY | 1 cut(s) | 828 |
| Bse1I | ACTGG | 3 cut(s) | 397, 441, 498 |
| Bse21I | CCTNAGG | 1 cut(s) | 959 |
| Bse3DI | GCAATG | 1 cut(s) | 271 |
| BseBI | CCWGG | 1 cut(s) | 190 |
| BseCI | ATCGAT | 1 cut(s) | 256 |
| BseDI | CCNNGG | 3 cut(s) | 97, 188, 222 |
| BseGI | GGATG | 2 cut(s) | 247, 1033 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 465, 787, 964 |
| BseMI | GCAATG | 1 cut(s) | 271 |
| BseMII | CTCAG | 2 cut(s) | 795, 796 |
| BseNI | ACTGG | 3 cut(s) | 397, 441, 498 |
| BseRI | GAGGAG | 1 cut(s) | 852 |
| BseXI | GCAGC | 3 cut(s) | 552, 1069, 1124 |
| BseYI | CCCAGC | 1 cut(s) | 1060 |
| Bsh1236I | CGCG | 1 cut(s) | 610 |
| BshFI | GGCC | 2 cut(s) | 469, 780 |
| BshTI | ACCGGT | 1 cut(s) | 828 |
| BshVI | ATCGAT | 1 cut(s) | 256 |
| BsiSI | CCGG | 3 cut(s) | 368, 576, 829 |
| BslFI | GGGAC | 2 cut(s) | 81, 734 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 465, 787, 964 |
| BsmAI | GTCTC | 2 cut(s) | 22, 131 |
| BsmFI | GGGAC | 2 cut(s) | 81, 734 |
| BsnI | GGCC | 2 cut(s) | 469, 780 |
| Bsp143I | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 561 |
| BspACI | CCGC | 1 cut(s) | 1052 |
| BspANI | GGCC | 2 cut(s) | 469, 780 |
| BspCNI | CTCAG | 2 cut(s) | 795, 796 |
| BspDI | ATCGAT | 1 cut(s) | 256 |
| BspFNI | CGCG | 1 cut(s) | 610 |
| BspMAI | CTGCAG | 1 cut(s) | 417 |
| BspPI | GGATC | 4 cut(s) | 566, 673, 927, 1082 |
| BspTI | CTTAAG | 2 cut(s) | 59, 128 |
| BsrDI | GCAATG | 1 cut(s) | 271 |
| BsrFI | RCCGGY | 1 cut(s) | 828 |
| BsrI | ACTGG | 3 cut(s) | 397, 441, 498 |
| BssAI | RCCGGY | 1 cut(s) | 828 |
| BssECI | CCNNGG | 3 cut(s) | 97, 188, 222 |
| BssMI | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| BssT1I | CCWWGG | 2 cut(s) | 97, 222 |
| Bst2UI | CCWGG | 1 cut(s) | 190 |
| Bst4CI | ACNGT | 2 cut(s) | 16, 92 |
| BstAFI | CTTAAG | 2 cut(s) | 59, 128 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 170, 1118 |
| BstC8I | GCNNGC | 2 cut(s) | 495, 657 |
| BstDEI | CTNAG | 5 cut(s) | 236, 561, 782, 804, 959 |
| BstEII | GGTNACC | 1 cut(s) | 92 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 785, 962 |
| BstF5I | GGATG | 2 cut(s) | 247, 1033 |
| BstFNI | CGCG | 1 cut(s) | 610 |
| BstH2I | RGCGCY | 1 cut(s) | 1068 |
| BstHHI | GCGC | 3 cut(s) | 550, 661, 1067 |
| BstKTI | GATC | 9 cut(s) | 112, 256, 322, 406, 574, 681, 761, 922, 1090 |
| BstMAI | GTCTC | 2 cut(s) | 22, 131 |
| BstMBI | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 170, 848, 1118 |
| BstNI | CCWGG | 1 cut(s) | 190 |
| BstNSI | RCATGY | 1 cut(s) | 1106 |
| BstPI | GGTNACC | 1 cut(s) | 92 |
| BstSCI | CCNGG | 2 cut(s) | 188, 574 |
| BstSFI | CTRYAG | 1 cut(s) | 413 |
| BstUI | CGCG | 1 cut(s) | 610 |
| BstV1I | GCAGC | 3 cut(s) | 552, 1069, 1124 |
| BstV2I | GAAGAC | 2 cut(s) | 392, 818 |
| BstX2I | RGATCY | 2 cut(s) | 758, 919 |
| BstYI | RGATCY | 2 cut(s) | 758, 919 |
| Bsu15I | ATCGAT | 1 cut(s) | 256 |
| Bsu36I | CCTNAGG | 1 cut(s) | 959 |
| BsuRI | GGCC | 2 cut(s) | 469, 780 |
| BsuTUI | ATCGAT | 1 cut(s) | 256 |
| BtsCI | GGATG | 2 cut(s) | 247, 1033 |
| Cac8I | GCNNGC | 2 cut(s) | 495, 657 |
| CfoI | GCGC | 3 cut(s) | 550, 661, 1067 |
| Cfr10I | RCCGGY | 1 cut(s) | 828 |
| Cfr13I | GGNCC | 1 cut(s) | 480 |
| ClaI | ATCGAT | 1 cut(s) | 256 |
| Csp6I | GTAC | 2 cut(s) | 857, 1188 |
| CspAI | ACCGGT | 1 cut(s) | 828 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 334, 369 |
| CviAII | CATG | 3 cut(s) | 425, 1001, 1103 |
| CviQI | GTAC | 2 cut(s) | 857, 1188 |
| DdeI | CTNAG | 5 cut(s) | 236, 561, 782, 804, 959 |
| DpnI | GATC | 9 cut(s) | 111, 255, 321, 405, 573, 680, 760, 921, 1089 |
| DpnII | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| EciI | GGCGGA | 1 cut(s) | 1067 |
| Eco130I | CCWWGG | 2 cut(s) | 97, 222 |
| Eco147I | AGGCCT | 1 cut(s) | 469 |
| Eco47I | GGWCC | 1 cut(s) | 480 |
| Eco57I | CTGAAG | 3 cut(s) | 219, 404, 1239 |
| Eco81I | CCTNAGG | 1 cut(s) | 959 |
| Eco91I | GGTNACC | 1 cut(s) | 92 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 785, 962 |
| EcoO109I | RGGNCCY | 1 cut(s) | 480 |
| EcoO65I | GGTNACC | 1 cut(s) | 92 |
| EcoRII | CCWGG | 1 cut(s) | 188 |
| EcoT14I | CCWWGG | 2 cut(s) | 97, 222 |
| ErhI | CCWWGG | 2 cut(s) | 97, 222 |
| FaeI | CATG | 3 cut(s) | 428, 1004, 1106 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 157, 189, 956, 988 |
| FaqI | GGGAC | 2 cut(s) | 81, 734 |
| FatI | CATG | 3 cut(s) | 424, 1000, 1102 |
| FbaI | TGATCA | 1 cut(s) | 403 |
| FblI | GTMKAC | 1 cut(s) | 11 |
| Fnu4HI | GCNGC | 3 cut(s) | 566, 1058, 1113 |
| FokI | GGATG | 2 cut(s) | 254, 1020 |
| Fsp4HI | GCNGC | 3 cut(s) | 566, 1058, 1113 |
| FspBI | CTAG | 7 cut(s) | 98, 276, 323, 551, 644, 741, 762 |
| FspI | TGCGCA | 1 cut(s) | 660 |
| GlaI | GCGC | 3 cut(s) | 549, 660, 1066 |
| GluI | GCNGC | 3 cut(s) | 566, 1058, 1113 |
| GsaI | CCCAGC | 1 cut(s) | 1064 |
| HaeII | RGCGCY | 1 cut(s) | 1068 |
| HaeIII | GGCC | 2 cut(s) | 469, 780 |
| HapII | CCGG | 3 cut(s) | 368, 576, 829 |
| HhaI | GCGC | 3 cut(s) | 550, 661, 1067 |
| Hin1II | CATG | 3 cut(s) | 428, 1004, 1106 |
| Hin6I | GCGC | 3 cut(s) | 548, 659, 1065 |
| HinP1I | GCGC | 3 cut(s) | 548, 659, 1065 |
| HinfI | GANTC | 7 cut(s) | 80, 280, 600, 640, 665, 1171, 1183 |
| HpaII | CCGG | 3 cut(s) | 368, 576, 829 |
| HphI | GGTGA | 3 cut(s) | 104, 357, 1180 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 433 |
| Hpy188I | TCNGA | 6 cut(s) | 85, 114, 199, 384, 403, 805 |
| Hpy188III | TCNNGA | 7 cut(s) | 156, 317, 323, 539, 644, 949, 973 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 433 |
| HpyAV | CCTTC | 2 cut(s) | 958, 970 |
| HpyCH4III | ACNGT | 2 cut(s) | 16, 92 |
| HpyCH4V | TGCA | 6 cut(s) | 31, 415, 493, 851, 1112, 1193 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 170, 848, 1118 |
| HpyF3I | CTNAG | 5 cut(s) | 236, 561, 782, 804, 959 |
| Hsp92II | CATG | 3 cut(s) | 428, 1004, 1106 |
| HspAI | GCGC | 3 cut(s) | 548, 659, 1065 |
| Ksp22I | TGATCA | 1 cut(s) | 403 |
| Kzo9I | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| LmnI | GCTCC | 2 cut(s) | 839, 1054 |
| Lsp1109I | GCAGC | 3 cut(s) | 552, 1069, 1124 |
| LweI | GCATC | 1 cut(s) | 726 |
| MaeI | CTAG | 7 cut(s) | 98, 276, 323, 551, 644, 741, 762 |
| MaeIII | GTNAC | 5 cut(s) | 92, 363, 824, 906, 1096 |
| MalI | GATC | 9 cut(s) | 111, 255, 321, 405, 573, 680, 760, 921, 1089 |
| MboI | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| MboII | GAAGA | 6 cut(s) | 383, 386, 397, 823, 1057, 1232 |
| MfeI | CAATTG | 1 cut(s) | 449 |
| MflI | RGATCY | 2 cut(s) | 758, 919 |
| MluCI | AATT | 5 cut(s) | 449, 864, 987, 1195, 1225 |
| MlyI | GAGTC | 2 cut(s) | 609, 649 |
| MnlI | CCTC | 9 cut(s) | 57, 65, 108, 117, 154, 459, 791, 830, 1021 |
| MseI | TTAA | 4 cut(s) | 60, 129, 894, 1149 |
| MspA1I | CMGCKG | 1 cut(s) | 1060 |
| MspCI | CTTAAG | 2 cut(s) | 59, 128 |
| MspI | CCGG | 3 cut(s) | 368, 576, 829 |
| MspR9I | CCNGG | 2 cut(s) | 190, 576 |
| MunI | CAATTG | 1 cut(s) | 449 |
| MvaI | CCWGG | 1 cut(s) | 190 |
| MvnI | CGCG | 1 cut(s) | 610 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 170, 848, 1118 |
| NciI | CCSGG | 1 cut(s) | 576 |
| NdeII | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| NlaIII | CATG | 3 cut(s) | 428, 1004, 1106 |
| NmuCI | GTSAC | 4 cut(s) | 92, 363, 824, 1096 |
| NsbI | TGCGCA | 1 cut(s) | 660 |
| NspI | RCATGY | 1 cut(s) | 1106 |
| PceI | AGGCCT | 1 cut(s) | 469 |
| PciI | ACATGT | 1 cut(s) | 1102 |
| PfeI | GAWTC | 5 cut(s) | 80, 280, 665, 1171, 1183 |
| PfoI | TCCNGGA | 1 cut(s) | 574 |
| PinAI | ACCGGT | 1 cut(s) | 828 |
| PkrI | GCNGC | 3 cut(s) | 567, 1059, 1114 |
| PleI | GAGTC | 2 cut(s) | 608, 648 |
| PpsI | GAGTC | 2 cut(s) | 608, 648 |
| PpuMI | RGGWCCY | 1 cut(s) | 480 |
| PscI | ACATGT | 1 cut(s) | 1102 |
| Psp5II | RGGWCCY | 1 cut(s) | 480 |
| Psp6I | CCWGG | 1 cut(s) | 188 |
| PspEI | GGTNACC | 1 cut(s) | 92 |
| PspFI | CCCAGC | 1 cut(s) | 1060 |
| PspGI | CCWGG | 1 cut(s) | 188 |
| PspPI | GGNCC | 1 cut(s) | 480 |
| PspPPI | RGGWCCY | 1 cut(s) | 480 |
| PstI | CTGCAG | 1 cut(s) | 417 |
| PsuI | RGATCY | 2 cut(s) | 758, 919 |
| PvuII | CAGCTG | 1 cut(s) | 1060 |
| RsaI | GTAC | 2 cut(s) | 858, 1189 |
| RsaNI | GTAC | 2 cut(s) | 857, 1188 |
| SaqAI | TTAA | 4 cut(s) | 60, 129, 894, 1149 |
| SatI | GCNGC | 3 cut(s) | 566, 1058, 1113 |
| Sau3AI | GATC | 9 cut(s) | 109, 253, 319, 403, 571, 678, 758, 919, 1087 |
| Sau96I | GGNCC | 1 cut(s) | 480 |
| SchI | GAGTC | 2 cut(s) | 609, 649 |
| ScrFI | CCNGG | 2 cut(s) | 190, 576 |
| SfaNI | GCATC | 1 cut(s) | 726 |
| SfcI | CTRYAG | 1 cut(s) | 413 |
| SinI | GGWCC | 1 cut(s) | 480 |
| SmlI | CTYRAG | 2 cut(s) | 59, 128 |
| SmoI | CTYRAG | 2 cut(s) | 59, 128 |
| Sse9I | AATT | 5 cut(s) | 449, 864, 987, 1195, 1225 |
| SseBI | AGGCCT | 1 cut(s) | 469 |
| SsiI | CCGC | 1 cut(s) | 1052 |
| SspMI | CTAG | 7 cut(s) | 98, 276, 323, 551, 644, 741, 762 |
| StuI | AGGCCT | 1 cut(s) | 469 |
| StyD4I | CCNGG | 2 cut(s) | 188, 574 |
| StyI | CCWWGG | 2 cut(s) | 97, 222 |
| TaaI | ACNGT | 2 cut(s) | 16, 92 |
| TaqI | TCGA | 6 cut(s) | 256, 538, 927, 1020, 1086, 1123 |
| TasI | AATT | 5 cut(s) | 449, 864, 987, 1195, 1225 |
| TatI | WGTACW | 1 cut(s) | 856 |
| TfiI | GAWTC | 5 cut(s) | 80, 280, 665, 1171, 1183 |
| Tru1I | TTAA | 4 cut(s) | 60, 129, 894, 1149 |
| Tru9I | TTAA | 4 cut(s) | 60, 129, 894, 1149 |
| TseFI | GTSAC | 4 cut(s) | 92, 363, 824, 1096 |
| TseI | GCWGC | 3 cut(s) | 565, 1057, 1112 |
| Tsp45I | GTSAC | 4 cut(s) | 92, 363, 824, 1096 |
| TspDTI | ATGAA | 6 cut(s) | 195, 282, 296, 413, 834, 912 |
| Vha464I | CTTAAG | 2 cut(s) | 59, 128 |
| VpaK11BI | GGWCC | 1 cut(s) | 480 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 785, 962 |
| XapI | RAATTY | 2 cut(s) | 864, 1195 |
| XbaI | TCTAGA | 2 cut(s) | 322, 643 |
| XceI | RCATGY | 1 cut(s) | 1106 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 526 |
| XmaJI | CCTAGG | 1 cut(s) | 97 |
| XmiI | GTMKAC | 1 cut(s) | 11 |
| XspI | CTAG | 7 cut(s) | 98, 276, 323, 551, 644, 741, 762 |