Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Reverse (-)

44846677 .. 44849189

Gene Structure 2513 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013969

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGAAGAGGTCGCCGGCCTTGTCGTCGTCGCCGGAGAACCAGCGCTCATTTAGGTTTCAGATGCAGGTGAGGTGGAGGAAGAGGCAATGGTGGTGGTGGAGGAAGGGTGCTGCCGGAGCTGAGCTAGATGGTGAGGAAGGGAGCTACAGGAGCCGAGGCGCAATTGTTATAAATAAATTCAATTTCTTGATCATCATGATGAGTGTGGCTACTGTCTCTCCGATTTTACATAATATTGATAACCTTGTTGGGTATCTCAAGAGGGGACGAGGGTTGGATTCTGATTACAGTGACCTAGGATTGCTAGATCACAGGGCCAAAAGGCTTGAGGTAGAGACTGATGTGGGAATTTCACAAGAGGCAAGATTTGCTTTTGATGAAAAACCCATGTCTTCTGAAGTGAGATTTGGGTATATACCCAAGGGGTTAGTGCTTAGGGATGACGAAATTGATCGATTACGCAATGAAAACACTAGGAATTTATTGTTGAACCATAAGAAACTTCATCTGGTTCTTGATCTAGACCACACCCTGCTGAATACCACTTTCCTTGATGAGATGTCACCCGACGAAGAATATCTTAGGACCCAAACCCAATCTGATCATTCTCTGCAATATGTTCACATTGTGGACACCCCCAGTAGGCAACTGATGACCAAGTTGAGGCCTTATATTAGGACATTTTTAGTGCAAGCCAGTCAAATGTTTGAGCTCTCCATATACACAATGGGTACTCGAGATTATGCGCTCGAAATGGCTAAGCTGCTTGATCCCGGAAATCATATCTTTGGTGGTAGAGTCATATCGCGTAATGATAGCACAGAAACAGATAGAAAGAGTCTAGATGTCCTGCTTGCCCGAGATTCTGCTGTTGTGATCCTTGATGATACGAAAAATGTGTGGACAAATGACAACAGGGACAATGTAATACTGATGCCTAGATACCATTTCTTTAGATCTAGTTGTCAAAAGTTTGGCCTCAGTAATCGTAAACCTTATTCCGAGTTGAAGACCGATGAATTTGACCGGTATGGAGGAGCTTACCTTGCAAATGTACTTCAACTTCTTGGGTATATCCACACTATATTCTTTAATGAAGTTGAGTTACGGGGGTGGGATCTTATCGACAGAGATGTGAGGCTCGTCTTGAAAATCCTTAAGAAGGAAGTCTTGAAGGACTGTAAAATTGTTTTCAGCCATGTATTCCCCTCAAATGTTGAGGCTGATACTCATCCTTTGTGGAAGATGGCGGAGCAGCTTGGCGCTACTTGTTCAACACAAGTCGATCCATCAGTCACACATGTGGTTGCAGCAAATGCTCGAACACAGAAATCGTGTTGGGCAGTTAAAGAAGGAAAGTTTTTGGTGAATCCTCAATGGATTCGTACTGCAAATTTTATGTGGCAAAAGCAACCTGAAGATAATTTTCCCTGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

480

Amino Acids

55.63

Weight (kDa)

8.42

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	169 - 318	2.2e-24	NLI interacting factor-like phosphatase
BRCT	PF00533	389 - 462	6.6e-09	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	408 - 460	2.1e-06	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	170
AarI	CACCTGC	1 cut(s)	55
Acc36I	ACCTGC	1 cut(s)	55
AccII	CGCG	1 cut(s)	808
AciI	CCGC	1 cut(s)	1250
AclWI	GGATC	4 cut(s)	764, 871, 1125, 1280
AcsI	RAATTY	5 cut(s)	176, 348, 478, 1019, 1393
AcuI	CTGAAG	2 cut(s)	417, 1437
AdeI	CACNNNGTG	1 cut(s)	628
AfaI	GTAC	3 cut(s)	733, 1056, 1387
AfeI	AGCGCT	1 cut(s)	44
AfiI	CCNNNNNNNGG	3 cut(s)	642, 663, 1162
AflII	CTTAAG	1 cut(s)	1157
AflIII	ACRYGT	1 cut(s)	1300
AgeI	ACCGGT	1 cut(s)	1026
AgsI	TTSAA	7 cut(s)	181, 490, 1009, 1061, 1150, 1174, 1275
AjuI	GAANNNNNNNTTGG	2 cut(s)	390, 422
AleI	CACNNNNGTG	1 cut(s)	1301
AluBI	AGCT	7 cut(s)	119, 124, 144, 712, 763, 1040, 1258
AluI	AGCT	7 cut(s)	119, 124, 144, 712, 763, 1040, 1258
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	2 cut(s)	220, 329
AlwI	GGATC	4 cut(s)	764, 871, 1125, 1280
Ama87I	CYCGRG	2 cut(s)	735, 858
Aor51HI	AGCGCT	1 cut(s)	44
AoxI	GGCC	4 cut(s)	15, 315, 665, 976
ApeKI	GCWGC	4 cut(s)	110, 763, 1255, 1310
ApoI	RAATTY	5 cut(s)	176, 348, 478, 1019, 1393
AsiGI	ACCGGT	1 cut(s)	1026
AspA2I	CCTAGG	1 cut(s)	295
AspLEI	GCGC	4 cut(s)	45, 161, 748, 1265
AspS9I	GGNCC	2 cut(s)	315, 585
AsuC2I	CCSGG	1 cut(s)	774
AsuHPI	GGTGA	4 cut(s)	79, 143, 555, 1378
AvaI	CYCGRG	2 cut(s)	735, 858
AvaII	GGWCC	1 cut(s)	585
AvrII	CCTAGG	1 cut(s)	295
BanII	GRGCYC	1 cut(s)	714
BarI	GAAGNNNNNNTAC	4 cut(s)	1047, 1079, 1089, 1121
BbsI	GAAGAC	2 cut(s)	384, 1016
Bbv12I	GWGCWC	1 cut(s)	714
BbvI	GCAGC	4 cut(s)	97, 750, 1267, 1322
BccI	CCATC	3 cut(s)	122, 1240, 1297
BclI	TGATCA	2 cut(s)	189, 601
BcnI	CCSGG	1 cut(s)	774
BcoDI	GTCTC	2 cut(s)	220, 329
BfaI	CTAG	8 cut(s)	125, 296, 305, 474, 521, 842, 939, 960
BfmI	CTRYAG	1 cut(s)	145
BfoI	RGCGCY	2 cut(s)	46, 1266
BfrI	CTTAAG	1 cut(s)	1157
BfuAI	ACCTGC	1 cut(s)	55
BglII	AGATCT	1 cut(s)	956
BisI	GCNGC	4 cut(s)	111, 764, 1256, 1311
BlnI	CCTAGG	1 cut(s)	295
BlpI	GCTNAGC	2 cut(s)	120, 759
BlsI	GCNGC	4 cut(s)	112, 765, 1257, 1312
Bme1390I	CCNGG	1 cut(s)	774
Bme18I	GGWCC	1 cut(s)	585
BmeT110I	CYCGRG	2 cut(s)	735, 858
BmgT120I	GGNCC	2 cut(s)	315, 585
BmiI	GGNNCC	2 cut(s)	152, 587
BmrFI	CCNGG	1 cut(s)	774
BmrI	ACTGGG	1 cut(s)	633
BmsI	GCATC	2 cut(s)	51, 924
BmuI	ACTGGG	1 cut(s)	633
BpiI	GAAGAC	2 cut(s)	384, 1016
Bpu10I	CCTNAGC	1 cut(s)	434
Bpu1102I	GCTNAGC	2 cut(s)	120, 759
BpuEI	CTTGAG	2 cut(s)	242, 347
BpuMI	CCSGG	1 cut(s)	774
Bsa29I	ATCGAT	1 cut(s)	454
BsaBI	GATNNNNATC	1 cut(s)	1230
BsaJI	CCNNGG	3 cut(s)	154, 295, 420
BsaWI	WCCGGW	1 cut(s)	1026
BsaXI	ACNNNNNCTCC	4 cut(s)	91, 121, 202, 232
Bsc4I	CCNNNNNNNGG	3 cut(s)	642, 663, 1162
Bse118I	RCCGGY	2 cut(s)	13, 1026
Bse1I	ACTGG	2 cut(s)	639, 696
Bse3DI	GCAATG	2 cut(s)	92, 469
Bse8I	GATNNNNATC	1 cut(s)	1230
BseCI	ATCGAT	1 cut(s)	454
BseDI	CCNNGG	3 cut(s)	154, 295, 420
BseGI	GGATG	2 cut(s)	445, 1231
BseJI	GATNNNNATC	1 cut(s)	1230
BseLI	CCNNNNNNNGG	3 cut(s)	642, 663, 1162
BseMI	GCAATG	2 cut(s)	92, 469
BseMII	CTCAG	2 cut(s)	111, 994
BseNI	ACTGG	2 cut(s)	639, 696
BseRI	GAGGAG	1 cut(s)	1050
BseXI	GCAGC	4 cut(s)	97, 750, 1267, 1322
Bsh1236I	CGCG	1 cut(s)	808
BshFI	GGCC	4 cut(s)	17, 317, 667, 978
BshTI	ACCGGT	1 cut(s)	1026
BshVI	ATCGAT	1 cut(s)	454
BsiHKAI	GWGCWC	1 cut(s)	714
BsiHKCI	CYCGRG	2 cut(s)	735, 858
BsiSI	CCGG	5 cut(s)	14, 32, 114, 774, 1027
BslFI	GGGAC	2 cut(s)	279, 932
BslI	CCNNNNNNNGG	3 cut(s)	642, 663, 1162
BsmAI	GTCTC	2 cut(s)	220, 329
BsmFI	GGGAC	2 cut(s)	279, 932
BsnI	GGCC	4 cut(s)	17, 317, 667, 978
BsoBI	CYCGRG	2 cut(s)	735, 858
Bsp1286I	GDGCHC	1 cut(s)	714
Bsp1720I	GCTNAGC	2 cut(s)	120, 759
BspACI	CCGC	1 cut(s)	1250
BspANI	GGCC	4 cut(s)	17, 317, 667, 978
BspCNI	CTCAG	2 cut(s)	112, 993
BspDI	ATCGAT	1 cut(s)	454
BspFNI	CGCG	1 cut(s)	808
BspHI	TCATGA	1 cut(s)	195
BspLI	GGNNCC	2 cut(s)	152, 587
BspMI	ACCTGC	1 cut(s)	55
BspPI	GGATC	4 cut(s)	764, 871, 1125, 1280
BspTI	CTTAAG	1 cut(s)	1157
BsrDI	GCAATG	2 cut(s)	92, 469
BsrFI	RCCGGY	2 cut(s)	13, 1026
BsrI	ACTGG	2 cut(s)	639, 696
BssAI	RCCGGY	2 cut(s)	13, 1026
BssECI	CCNNGG	3 cut(s)	154, 295, 420
BssT1I	CCWWGG	2 cut(s)	295, 420
Bst4CI	ACNGT	3 cut(s)	214, 290, 1181
Bst6I	CTCTTC	1 cut(s)	74
BstAFI	CTTAAG	1 cut(s)	1157
BstAPI	GCANNNNNTGC	2 cut(s)	368, 1316
BstC8I	GCNNGC	3 cut(s)	15, 693, 855
BstDEI	CTNAG	5 cut(s)	120, 434, 581, 759, 980
BstENI	CCTNNNNNAGG	1 cut(s)	1160
BstF5I	GGATG	2 cut(s)	445, 1231
BstFNI	CGCG	1 cut(s)	808
BstH2I	RGCGCY	2 cut(s)	46, 1266
BstHHI	GCGC	4 cut(s)	45, 161, 748, 1265
BstMAI	GTCTC	2 cut(s)	220, 329
BstMWI	GCNNNNNNNGC	5 cut(s)	116, 150, 368, 1046, 1316
BstNSI	RCATGY	1 cut(s)	1304
BstSCI	CCNGG	1 cut(s)	772
BstSFI	CTRYAG	1 cut(s)	145
BstUI	CGCG	1 cut(s)	808
BstV1I	GCAGC	4 cut(s)	97, 750, 1267, 1322
BstV2I	GAAGAC	2 cut(s)	384, 1016
BstX2I	RGATCY	2 cut(s)	956, 1117
BstYI	RGATCY	2 cut(s)	956, 1117
Bsu15I	ATCGAT	1 cut(s)	454
BsuRI	GGCC	4 cut(s)	17, 317, 667, 978
BsuTUI	ATCGAT	1 cut(s)	454
BtsCI	GGATG	2 cut(s)	445, 1231
BtsIMutI	CAGTG	1 cut(s)	295
BveI	ACCTGC	1 cut(s)	55
Cac8I	GCNNGC	3 cut(s)	15, 693, 855
CciI	TCATGA	1 cut(s)	195
CfoI	GCGC	4 cut(s)	45, 161, 748, 1265
Cfr10I	RCCGGY	2 cut(s)	13, 1026
Cfr13I	GGNCC	2 cut(s)	315, 585
ClaI	ATCGAT	1 cut(s)	454
Csp6I	GTAC	3 cut(s)	732, 1055, 1386
CspAI	ACCGGT	1 cut(s)	1026
CspCI	CAANNNNNGTGG	4 cut(s)	74, 109, 532, 567
CviAII	CATG	4 cut(s)	196, 388, 1199, 1301
CviQI	GTAC	3 cut(s)	732, 1055, 1386
DdeI	CTNAG	5 cut(s)	120, 434, 581, 759, 980
DraIII	CACNNNGTG	1 cut(s)	628
Eam1104I	CTCTTC	1 cut(s)	74
EarI	CTCTTC	1 cut(s)	74
EciI	GGCGGA	1 cut(s)	1265
Ecl136II	GAGCTC	1 cut(s)	712
Eco130I	CCWWGG	2 cut(s)	295, 420
Eco147I	AGGCCT	1 cut(s)	667
Eco24I	GRGCYC	1 cut(s)	714
Eco47I	GGWCC	1 cut(s)	585
Eco47III	AGCGCT	1 cut(s)	44
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	2 cut(s)	417, 1437
Eco88I	CYCGRG	2 cut(s)	735, 858
EcoICRI	GAGCTC	1 cut(s)	712
EcoNI	CCTNNNNNAGG	1 cut(s)	1160
EcoO109I	RGGNCCY	1 cut(s)	585
EcoT14I	CCWWGG	2 cut(s)	295, 420
EcoT38I	GRGCYC	1 cut(s)	714
ErhI	CCWWGG	2 cut(s)	295, 420
FaeI	CATG	4 cut(s)	199, 391, 1202, 1304
FalI	AAGNNNNNCTT	6 cut(s)	355, 387, 564, 596, 1154, 1186
FaqI	GGGAC	2 cut(s)	279, 932
FatI	CATG	4 cut(s)	195, 387, 1198, 1300
FbaI	TGATCA	2 cut(s)	189, 601
Fnu4HI	GCNGC	4 cut(s)	111, 764, 1256, 1311
FokI	GGATG	2 cut(s)	452, 1218
FriOI	GRGCYC	1 cut(s)	714
Fsp4HI	GCNGC	4 cut(s)	111, 764, 1256, 1311
FspBI	CTAG	8 cut(s)	125, 296, 305, 474, 521, 842, 939, 960
GlaI	GCGC	4 cut(s)	44, 160, 747, 1264
GluI	GCNGC	4 cut(s)	111, 764, 1256, 1311
HaeII	RGCGCY	2 cut(s)	46, 1266
HaeIII	GGCC	4 cut(s)	17, 317, 667, 978
HapII	CCGG	5 cut(s)	14, 32, 114, 774, 1027
HhaI	GCGC	4 cut(s)	45, 161, 748, 1265
Hin1II	CATG	4 cut(s)	199, 391, 1202, 1304
Hin6I	GCGC	4 cut(s)	43, 159, 746, 1263
HinP1I	GCGC	4 cut(s)	43, 159, 746, 1263
HinfI	GANTC	6 cut(s)	278, 798, 838, 863, 1369, 1381
HpaII	CCGG	5 cut(s)	14, 32, 114, 774, 1027
HphI	GGTGA	4 cut(s)	79, 143, 555, 1378
Hpy166II	GTNNAC	4 cut(s)	622, 631, 903, 992
Hpy188I	TCNGA	6 cut(s)	60, 222, 283, 397, 601, 1003
Hpy188III	TCNNGA	9 cut(s)	187, 196, 259, 515, 521, 737, 842, 1147, 1171
Hpy8I	GTNNAC	4 cut(s)	622, 631, 903, 992
Hpy99I	CGWCG	3 cut(s)	28, 31, 572
HpyAV	CCTTC	5 cut(s)	97, 131, 1156, 1168, 1346
HpyCH4III	ACNGT	3 cut(s)	214, 290, 1181
HpyCH4V	TGCA	6 cut(s)	64, 613, 691, 1049, 1310, 1391
HpyF10VI	GCNNNNNNNGC	5 cut(s)	116, 150, 368, 1046, 1316
HpyF3I	CTNAG	5 cut(s)	120, 434, 581, 759, 980
Hsp92II	CATG	4 cut(s)	199, 391, 1202, 1304
HspAI	GCGC	4 cut(s)	43, 159, 746, 1263
KroI	GCCGGC	1 cut(s)	13
KroNI	GCCGGC	1 cut(s)	15
Ksp22I	TGATCA	2 cut(s)	189, 601
LmnI	GCTCC	5 cut(s)	116, 141, 150, 1037, 1252
Lsp1109I	GCAGC	4 cut(s)	97, 750, 1267, 1322
LweI	GCATC	2 cut(s)	51, 924
MaeI	CTAG	8 cut(s)	125, 296, 305, 474, 521, 842, 939, 960
MaeIII	GTNAC	4 cut(s)	290, 561, 1104, 1294
MboII	GAAGA	7 cut(s)	16, 91, 384, 584, 1021, 1255, 1430
MfeI	CAATTG	1 cut(s)	162
MflI	RGATCY	2 cut(s)	956, 1117
MhlI	GDGCHC	1 cut(s)	714
MlyI	GAGTC	2 cut(s)	807, 847
MmeI	TCCRAC	1 cut(s)	255
MroNI	GCCGGC	1 cut(s)	13
MseI	TTAA	3 cut(s)	1092, 1158, 1347
MslI	CAYNNNNRTG	2 cut(s)	197, 1301
MspCI	CTTAAG	1 cut(s)	1157
MspI	CCGG	5 cut(s)	14, 32, 114, 774, 1027
MspR9I	CCNGG	1 cut(s)	774
MunI	CAATTG	1 cut(s)	162
MvnI	CGCG	1 cut(s)	808
MwoI	GCNNNNNNNGC	5 cut(s)	116, 150, 368, 1046, 1316
NaeI	GCCGGC	1 cut(s)	15
NciI	CCSGG	1 cut(s)	774
NgoMIV	GCCGGC	1 cut(s)	13
NlaIII	CATG	4 cut(s)	199, 391, 1202, 1304
NlaIV	GGNNCC	2 cut(s)	152, 587
NmeAIII	GCCGAG	1 cut(s)	179
NmuCI	GTSAC	3 cut(s)	290, 561, 1294
NspI	RCATGY	1 cut(s)	1304
OliI	CACNNNNGTG	1 cut(s)	1301
PaeR7I	CTCGAG	1 cut(s)	735
PagI	TCATGA	1 cut(s)	195
PaqCI	CACCTGC	1 cut(s)	55
PceI	AGGCCT	1 cut(s)	667
PciI	ACATGT	1 cut(s)	1300
PdiI	GCCGGC	1 cut(s)	15
PfeI	GAWTC	4 cut(s)	278, 863, 1369, 1381
PfoI	TCCNGGA	1 cut(s)	772
PinAI	ACCGGT	1 cut(s)	1026
PkrI	GCNGC	4 cut(s)	112, 765, 1257, 1312
PleI	GAGTC	2 cut(s)	806, 846
PpsI	GAGTC	2 cut(s)	806, 846
PpuMI	RGGWCCY	1 cut(s)	585
PscI	ACATGT	1 cut(s)	1300
PsiI	TTATAA	1 cut(s)	170
Psp124BI	GAGCTC	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	585
PspN4I	GGNNCC	2 cut(s)	152, 587
PspPI	GGNCC	2 cut(s)	315, 585
PspPPI	RGGWCCY	1 cut(s)	585
PsuI	RGATCY	2 cut(s)	956, 1117
RsaI	GTAC	3 cut(s)	733, 1056, 1387
RsaNI	GTAC	3 cut(s)	732, 1055, 1386
RseI	CAYNNNNRTG	2 cut(s)	197, 1301
SacI	GAGCTC	1 cut(s)	714
SaqAI	TTAA	3 cut(s)	1092, 1158, 1347
SatI	GCNGC	4 cut(s)	111, 764, 1256, 1311
Sau96I	GGNCC	2 cut(s)	315, 585
SchI	GAGTC	2 cut(s)	807, 847
ScrFI	CCNGG	1 cut(s)	774
SduI	GDGCHC	1 cut(s)	714
SfaNI	GCATC	2 cut(s)	51, 924
SfcI	CTRYAG	1 cut(s)	145
Sfr274I	CTCGAG	1 cut(s)	735
SinI	GGWCC	1 cut(s)	585
SlaI	CTCGAG	1 cut(s)	735
SmiMI	CAYNNNNRTG	2 cut(s)	197, 1301
SmlI	CTYRAG	4 cut(s)	257, 326, 735, 1157
SmoI	CTYRAG	4 cut(s)	257, 326, 735, 1157
SseBI	AGGCCT	1 cut(s)	667
SsiI	CCGC	1 cut(s)	1250
SspI	AATATT	1 cut(s)	235
SspMI	CTAG	8 cut(s)	125, 296, 305, 474, 521, 842, 939, 960
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	1 cut(s)	667
StyD4I	CCNGG	1 cut(s)	772
StyI	CCWWGG	2 cut(s)	295, 420
TaaI	ACNGT	3 cut(s)	214, 290, 1181
TaqI	TCGA	6 cut(s)	454, 736, 750, 1125, 1284, 1321
TaqII	GACCGA	1 cut(s)	1028
TatI	WGTACW	1 cut(s)	1054
TfiI	GAWTC	4 cut(s)	278, 863, 1369, 1381
Tru1I	TTAA	3 cut(s)	1092, 1158, 1347
Tru9I	TTAA	3 cut(s)	1092, 1158, 1347
TscAI	CASTG	1 cut(s)	295
TseFI	GTSAC	3 cut(s)	290, 561, 1294
TseI	GCWGC	4 cut(s)	110, 763, 1255, 1310
Tsp45I	GTSAC	3 cut(s)	290, 561, 1294
TspDTI	ATGAA	6 cut(s)	17, 393, 480, 494, 1032, 1110
TspRI	CASTG	1 cut(s)	295
Vha464I	CTTAAG	1 cut(s)	1157
VpaK11BI	GGWCC	1 cut(s)	585
XagI	CCTNNNNNAGG	1 cut(s)	1160
XapI	RAATTY	5 cut(s)	176, 348, 478, 1019, 1393
XbaI	TCTAGA	2 cut(s)	520, 841
XceI	RCATGY	1 cut(s)	1304
XcmI	CCANNNNNNNNNTGG	1 cut(s)	724
XhoI	CTCGAG	1 cut(s)	735
XmaJI	CCTAGG	1 cut(s)	295
XspI	CTAG	8 cut(s)	125, 296, 305, 474, 521, 842, 939, 960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.