RNA polymerase II C-terminal domain phosphatase-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 1055 |
| AclWI | GGATC | 4 cut(s) | 569, 676, 930, 1085 |
| AcoI | YGGCCR | 1 cut(s) | 561 |
| AcsI | RAATTY | 3 cut(s) | 153, 283, 1198 |
| AcuI | CTGAAG | 3 cut(s) | 222, 983, 1242 |
| AdeI | CACNNNGTG | 1 cut(s) | 433 |
| AfaI | GTAC | 1 cut(s) | 861 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 447, 468, 790, 967 |
| AflII | CTTAAG | 2 cut(s) | 131, 386 |
| AflIII | ACRYGT | 1 cut(s) | 1105 |
| AgsI | TTSAA | 6 cut(s) | 295, 814, 866, 955, 979, 1080 |
| AjiI | CACGTC | 1 cut(s) | 949 |
| AjnI | CCWGG | 1 cut(s) | 577 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 195, 227 |
| AleI | CACNNNNGTG | 1 cut(s) | 1106 |
| AluBI | AGCT | 2 cut(s) | 845, 1063 |
| AluI | AGCT | 2 cut(s) | 845, 1063 |
| Alw26I | GTCTC | 2 cut(s) | 25, 134 |
| AlwI | GGATC | 4 cut(s) | 569, 676, 930, 1085 |
| Ama87I | CYCGRG | 1 cut(s) | 663 |
| AoxI | GGCC | 4 cut(s) | 120, 470, 561, 781 |
| ApeKI | GCWGC | 2 cut(s) | 1060, 1115 |
| ApoI | RAATTY | 3 cut(s) | 153, 283, 1198 |
| AspA2I | CCTAGG | 2 cut(s) | 100, 743 |
| AspLEI | GCGC | 2 cut(s) | 553, 1070 |
| AspS9I | GGNCC | 1 cut(s) | 120 |
| AsuHPI | GGTGA | 2 cut(s) | 360, 1183 |
| AvaI | CYCGRG | 1 cut(s) | 663 |
| AvrII | CCTAGG | 2 cut(s) | 100, 743 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 902, 935 |
| BalI | TGGCCA | 1 cut(s) | 563 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 852, 884, 894, 926 |
| BbsI | GAAGAC | 1 cut(s) | 821 |
| BbvI | GCAGC | 2 cut(s) | 1072, 1127 |
| BccI | CCATC | 3 cut(s) | 526, 1045, 1102 |
| BciT130I | CCWGG | 1 cut(s) | 579 |
| BclI | TGATCA | 2 cut(s) | 358, 406 |
| BcoDI | GTCTC | 2 cut(s) | 25, 134 |
| BfaI | CTAG | 8 cut(s) | 101, 110, 279, 326, 554, 647, 744, 765 |
| BfoI | RGCGCY | 1 cut(s) | 1071 |
| BfrI | CTTAAG | 2 cut(s) | 131, 386 |
| BglII | AGATCT | 1 cut(s) | 761 |
| BisI | GCNGC | 2 cut(s) | 1061, 1116 |
| BlnI | CCTAGG | 2 cut(s) | 100, 743 |
| BlsI | GCNGC | 2 cut(s) | 1062, 1117 |
| Bme1390I | CCNGG | 1 cut(s) | 579 |
| BmeT110I | CYCGRG | 1 cut(s) | 663 |
| BmgBI | CACGTC | 1 cut(s) | 949 |
| BmgT120I | GGNCC | 1 cut(s) | 120 |
| BmrFI | CCNGG | 1 cut(s) | 579 |
| BmrI | ACTGGG | 2 cut(s) | 394, 438 |
| BmsI | GCATC | 1 cut(s) | 729 |
| BmuI | ACTGGG | 2 cut(s) | 394, 438 |
| BpiI | GAAGAC | 1 cut(s) | 821 |
| Bpu10I | CCTNAGC | 1 cut(s) | 239 |
| BpuEI | CTTGAG | 1 cut(s) | 47 |
| Bsa29I | ATCGAT | 1 cut(s) | 259 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1035 |
| BsaJI | CCNNGG | 3 cut(s) | 100, 225, 743 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 7, 37 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 447, 468, 790, 967 |
| Bse1I | ACTGG | 3 cut(s) | 400, 444, 501 |
| Bse3DI | GCAATG | 1 cut(s) | 274 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1035 |
| BseBI | CCWGG | 1 cut(s) | 579 |
| BseCI | ATCGAT | 1 cut(s) | 259 |
| BseDI | CCNNGG | 3 cut(s) | 100, 225, 743 |
| BseGI | GGATG | 2 cut(s) | 250, 1036 |
| BseJI | GATNNNNATC | 1 cut(s) | 1035 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 447, 468, 790, 967 |
| BseMI | GCAATG | 1 cut(s) | 274 |
| BseMII | CTCAG | 2 cut(s) | 798, 799 |
| BseNI | ACTGG | 3 cut(s) | 400, 444, 501 |
| BseRI | GAGGAG | 1 cut(s) | 855 |
| BseXI | GCAGC | 2 cut(s) | 1072, 1127 |
| BseYI | CCCAGC | 1 cut(s) | 1063 |
| BshFI | GGCC | 4 cut(s) | 122, 472, 563, 783 |
| BshVI | ATCGAT | 1 cut(s) | 259 |
| BsiHKCI | CYCGRG | 1 cut(s) | 663 |
| BslFI | GGGAC | 3 cut(s) | 84, 595, 737 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 447, 468, 790, 967 |
| BsmAI | GTCTC | 2 cut(s) | 25, 134 |
| BsmBI | CGTCTC | 1 cut(s) | 25 |
| BsmFI | GGGAC | 3 cut(s) | 84, 595, 737 |
| BsnI | GGCC | 4 cut(s) | 122, 472, 563, 783 |
| BsoBI | CYCGRG | 1 cut(s) | 663 |
| BspACI | CCGC | 1 cut(s) | 1055 |
| BspANI | GGCC | 4 cut(s) | 122, 472, 563, 783 |
| BspCNI | CTCAG | 2 cut(s) | 798, 799 |
| BspDI | ATCGAT | 1 cut(s) | 259 |
| BspPI | GGATC | 4 cut(s) | 569, 676, 930, 1085 |
| BspTI | CTTAAG | 2 cut(s) | 131, 386 |
| BsrDI | GCAATG | 1 cut(s) | 274 |
| BsrI | ACTGG | 3 cut(s) | 400, 444, 501 |
| BssECI | CCNNGG | 3 cut(s) | 100, 225, 743 |
| BssT1I | CCWWGG | 3 cut(s) | 100, 225, 743 |
| Bst2UI | CCWGG | 1 cut(s) | 579 |
| Bst4CI | ACNGT | 3 cut(s) | 19, 95, 986 |
| BstAFI | CTTAAG | 2 cut(s) | 131, 386 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 173, 1121 |
| BstC8I | GCNNGC | 2 cut(s) | 498, 660 |
| BstDEI | CTNAG | 3 cut(s) | 239, 785, 807 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 788, 965 |
| BstF5I | GGATG | 2 cut(s) | 250, 1036 |
| BstH2I | RGCGCY | 1 cut(s) | 1071 |
| BstHHI | GCGC | 2 cut(s) | 553, 1070 |
| BstMAI | GTCTC | 2 cut(s) | 25, 134 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 173, 851, 1121 |
| BstNI | CCWGG | 1 cut(s) | 579 |
| BstNSI | RCATGY | 1 cut(s) | 1109 |
| BstSCI | CCNGG | 1 cut(s) | 577 |
| BstV1I | GCAGC | 2 cut(s) | 1072, 1127 |
| BstV2I | GAAGAC | 1 cut(s) | 821 |
| BstX2I | RGATCY | 2 cut(s) | 761, 922 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 232 |
| BstYI | RGATCY | 2 cut(s) | 761, 922 |
| Bsu15I | ATCGAT | 1 cut(s) | 259 |
| BsuRI | GGCC | 4 cut(s) | 122, 472, 563, 783 |
| BsuTUI | ATCGAT | 1 cut(s) | 259 |
| BtrI | CACGTC | 1 cut(s) | 949 |
| BtsCI | GGATG | 2 cut(s) | 250, 1036 |
| BtsIMutI | CAGTG | 1 cut(s) | 100 |
| Cac8I | GCNNGC | 2 cut(s) | 498, 660 |
| CfoI | GCGC | 2 cut(s) | 553, 1070 |
| Cfr13I | GGNCC | 1 cut(s) | 120 |
| ClaI | ATCGAT | 1 cut(s) | 259 |
| Csp6I | GTAC | 1 cut(s) | 860 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 337, 372 |
| CviAII | CATG | 4 cut(s) | 193, 607, 1004, 1106 |
| CviQI | GTAC | 1 cut(s) | 860 |
| DdeI | CTNAG | 3 cut(s) | 239, 785, 807 |
| DraIII | CACNNNGTG | 1 cut(s) | 433 |
| EaeI | YGGCCR | 1 cut(s) | 561 |
| EciI | GGCGGA | 1 cut(s) | 1070 |
| Eco130I | CCWWGG | 3 cut(s) | 100, 225, 743 |
| Eco147I | AGGCCT | 1 cut(s) | 472 |
| Eco57I | CTGAAG | 3 cut(s) | 222, 983, 1242 |
| Eco88I | CYCGRG | 1 cut(s) | 663 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 788, 965 |
| EcoRII | CCWGG | 1 cut(s) | 577 |
| EcoT14I | CCWWGG | 3 cut(s) | 100, 225, 743 |
| ErhI | CCWWGG | 3 cut(s) | 100, 225, 743 |
| Esp3I | CGTCTC | 1 cut(s) | 25 |
| FaeI | CATG | 4 cut(s) | 196, 610, 1007, 1109 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 160, 192, 369, 401, 959, 991 |
| FaqI | GGGAC | 3 cut(s) | 84, 595, 737 |
| FatI | CATG | 4 cut(s) | 192, 606, 1003, 1105 |
| FbaI | TGATCA | 2 cut(s) | 358, 406 |
| Fnu4HI | GCNGC | 2 cut(s) | 1061, 1116 |
| FokI | GGATG | 2 cut(s) | 257, 1023 |
| Fsp4HI | GCNGC | 2 cut(s) | 1061, 1116 |
| FspBI | CTAG | 8 cut(s) | 101, 110, 279, 326, 554, 647, 744, 765 |
| GlaI | GCGC | 2 cut(s) | 552, 1069 |
| GluI | GCNGC | 2 cut(s) | 1061, 1116 |
| GsaI | CCCAGC | 1 cut(s) | 1067 |
| HaeII | RGCGCY | 1 cut(s) | 1071 |
| HaeIII | GGCC | 4 cut(s) | 122, 472, 563, 783 |
| HhaI | GCGC | 2 cut(s) | 553, 1070 |
| Hin1II | CATG | 4 cut(s) | 196, 610, 1007, 1109 |
| Hin6I | GCGC | 2 cut(s) | 551, 1068 |
| HinP1I | GCGC | 2 cut(s) | 551, 1068 |
| HinfI | GANTC | 6 cut(s) | 83, 603, 643, 668, 1174, 1186 |
| HphI | GGTGA | 2 cut(s) | 360, 1183 |
| Hpy166II | GTNNAC | 2 cut(s) | 427, 436 |
| Hpy188I | TCNGA | 5 cut(s) | 27, 88, 363, 406, 808 |
| Hpy188III | TCNNGA | 8 cut(s) | 64, 320, 326, 542, 647, 952, 961, 976 |
| Hpy8I | GTNNAC | 2 cut(s) | 427, 436 |
| Hpy99I | CGWCG | 1 cut(s) | 377 |
| HpyAV | CCTTC | 3 cut(s) | 961, 973, 1151 |
| HpyCH4III | ACNGT | 3 cut(s) | 19, 95, 986 |
| HpyCH4IV | ACGT | 2 cut(s) | 485, 948 |
| HpyCH4V | TGCA | 5 cut(s) | 418, 496, 854, 1115, 1196 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 173, 851, 1121 |
| HpyF3I | CTNAG | 3 cut(s) | 239, 785, 807 |
| HpySE526I | ACGT | 2 cut(s) | 485, 948 |
| Hsp92II | CATG | 4 cut(s) | 196, 610, 1007, 1109 |
| HspAI | GCGC | 2 cut(s) | 551, 1068 |
| Ksp22I | TGATCA | 2 cut(s) | 358, 406 |
| LmnI | GCTCC | 2 cut(s) | 842, 1057 |
| Lsp1109I | GCAGC | 2 cut(s) | 1072, 1127 |
| LweI | GCATC | 1 cut(s) | 729 |
| MaeI | CTAG | 8 cut(s) | 101, 110, 279, 326, 554, 647, 744, 765 |
| MaeII | ACGT | 2 cut(s) | 485, 948 |
| MaeIII | GTNAC | 3 cut(s) | 95, 366, 1099 |
| MboII | GAAGA | 5 cut(s) | 389, 826, 976, 1060, 1235 |
| MflI | RGATCY | 2 cut(s) | 761, 922 |
| MlsI | TGGCCA | 1 cut(s) | 563 |
| MluCI | AATT | 6 cut(s) | 153, 252, 283, 990, 1198, 1228 |
| MluNI | TGGCCA | 1 cut(s) | 563 |
| MlyI | GAGTC | 3 cut(s) | 77, 612, 652 |
| MmeI | TCCRAC | 1 cut(s) | 60 |
| MnlI | CCTC | 9 cut(s) | 60, 68, 157, 462, 794, 833, 936, 1018, 1188 |
| Mox20I | TGGCCA | 1 cut(s) | 563 |
| MscI | TGGCCA | 1 cut(s) | 563 |
| MseI | TTAA | 4 cut(s) | 132, 387, 897, 1152 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1106 |
| Msp20I | TGGCCA | 1 cut(s) | 563 |
| MspA1I | CMGCKG | 1 cut(s) | 1063 |
| MspCI | CTTAAG | 2 cut(s) | 131, 386 |
| MspR9I | CCNGG | 1 cut(s) | 579 |
| MvaI | CCWGG | 1 cut(s) | 579 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 173, 851, 1121 |
| NlaIII | CATG | 4 cut(s) | 196, 610, 1007, 1109 |
| NmuCI | GTSAC | 3 cut(s) | 95, 366, 1099 |
| NspI | RCATGY | 1 cut(s) | 1109 |
| OliI | CACNNNNGTG | 1 cut(s) | 1106 |
| PceI | AGGCCT | 1 cut(s) | 472 |
| PciI | ACATGT | 1 cut(s) | 1105 |
| PfeI | GAWTC | 3 cut(s) | 668, 1174, 1186 |
| PfoI | TCCNGGA | 1 cut(s) | 577 |
| PkrI | GCNGC | 2 cut(s) | 1062, 1117 |
| PleI | GAGTC | 3 cut(s) | 77, 611, 651 |
| PpsI | GAGTC | 3 cut(s) | 77, 611, 651 |
| PscI | ACATGT | 1 cut(s) | 1105 |
| Psp6I | CCWGG | 1 cut(s) | 577 |
| PspFI | CCCAGC | 1 cut(s) | 1063 |
| PspGI | CCWGG | 1 cut(s) | 577 |
| PspPI | GGNCC | 1 cut(s) | 120 |
| PsuI | RGATCY | 2 cut(s) | 761, 922 |
| PvuII | CAGCTG | 1 cut(s) | 1063 |
| RsaI | GTAC | 1 cut(s) | 861 |
| RsaNI | GTAC | 1 cut(s) | 860 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1106 |
| SaqAI | TTAA | 4 cut(s) | 132, 387, 897, 1152 |
| SatI | GCNGC | 2 cut(s) | 1061, 1116 |
| Sau96I | GGNCC | 1 cut(s) | 120 |
| SchI | GAGTC | 3 cut(s) | 77, 612, 652 |
| ScrFI | CCNGG | 1 cut(s) | 579 |
| SetI | ASST | 9 cut(s) | 51, 102, 138, 488, 749, 847, 951, 1065, 1222 |
| SfaNI | GCATC | 1 cut(s) | 729 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1106 |
| SmlI | CTYRAG | 3 cut(s) | 62, 131, 386 |
| SmoI | CTYRAG | 3 cut(s) | 62, 131, 386 |
| Sse9I | AATT | 6 cut(s) | 153, 252, 283, 990, 1198, 1228 |
| SseBI | AGGCCT | 1 cut(s) | 472 |
| SsiI | CCGC | 1 cut(s) | 1055 |
| SspI | AATATT | 1 cut(s) | 40 |
| SspMI | CTAG | 8 cut(s) | 101, 110, 279, 326, 554, 647, 744, 765 |
| StuI | AGGCCT | 1 cut(s) | 472 |
| StyD4I | CCNGG | 1 cut(s) | 577 |
| StyI | CCWWGG | 3 cut(s) | 100, 225, 743 |
| TaaI | ACNGT | 3 cut(s) | 19, 95, 986 |
| TaiI | ACGT | 2 cut(s) | 488, 951 |
| TaqI | TCGA | 5 cut(s) | 259, 541, 1023, 1089, 1126 |
| TasI | AATT | 6 cut(s) | 153, 252, 283, 990, 1198, 1228 |
| TatI | WGTACW | 1 cut(s) | 859 |
| TfiI | GAWTC | 3 cut(s) | 668, 1174, 1186 |
| Tru1I | TTAA | 4 cut(s) | 132, 387, 897, 1152 |
| Tru9I | TTAA | 4 cut(s) | 132, 387, 897, 1152 |
| TscAI | CASTG | 1 cut(s) | 100 |
| TseFI | GTSAC | 3 cut(s) | 95, 366, 1099 |
| TseI | GCWGC | 2 cut(s) | 1060, 1115 |
| Tsp45I | GTSAC | 3 cut(s) | 95, 366, 1099 |
| TspDTI | ATGAA | 6 cut(s) | 198, 285, 299, 837, 915, 1178 |
| TspRI | CASTG | 1 cut(s) | 100 |
| Vha464I | CTTAAG | 2 cut(s) | 131, 386 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 788, 965 |
| XapI | RAATTY | 3 cut(s) | 153, 283, 1198 |
| XbaI | TCTAGA | 2 cut(s) | 325, 646 |
| XceI | RCATGY | 1 cut(s) | 1109 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 529 |
| XmaJI | CCTAGG | 2 cut(s) | 100, 743 |
| XspI | CTAG | 8 cut(s) | 101, 110, 279, 326, 554, 647, 744, 765 |