Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Forward (+)

24721158 .. 24722368

Gene Structure 1211 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24030

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGTCTTCTGAAGTGAGATTGGGGTATATACCCAAGGGGTTGGTGCCTAGGGATGACGAAATTGATCGATTACGCAATGAAAACACTAGGAATTTATTGTTGAACCATAAGAAACTTCATCTGGTTCTTGATCTAGACCACACCCTGCTGAATACCACTTTCCTTGATGAGATGTCACCCGACGAAGAATATCTTAAGACCCAAACCCAATCTGATCATTCTCTGCAATATGTTCACATTGTGGACACCCCCAGTAGGCAACTGATGACCAAGTTGAGGCCGTATATTAGGACATTTTTAGTGCAAGCCAGTCAAATGTTTGAGCTCTCCATATACACAATGGGTACTCGAGATTATGCCCTTGAAATGGCTAAGCTGCTTGATCCCGGAAATCATATCTTTGGGGGTAGAGTCATATCGCGTAATGATAGCACAGAAACAGATAGAAAGAGTCTAGATGTCCTGCTTGCCCGAGATTCTGCTGTTGTGATCCTTGATGATACGAAAAATGTGTGGACAAATGACAACAGGGACAATGTAATACTGATGCCTAGATACCATTTCTTTAGATCTAGTTGTCAAAAGTTTGGCCTCAGTAATCGTAAACCTTATTCCGAGTTGAAGACCGATGAATTTGACCGGTATGGTGGAGCTTACCTTGCAAATGTACTTCGACTTCTTGGGTATGTCCACACTATATTCTTTAATGAAGTTGAGTTACGGTGGTGGGATTTTATTGACAGAGATGTGAGGCTCGTCTTGAAAATCCTTAAGAAGGAAGTCTTGAAGGACTGTAAAATTGTTTTCAGCCATGTATTCCCCTCAAATGTCGAGGCTGATACTCATCCTTTGTGGAAGATGGCGGAGCAGCTGGGCGCTACTTGTTCAACACAAGTCGATCCATCAGTCACACATGTGGTTGCAGCAAATGCTCGAACACAGAAATCGTGTTGGGCAGTTAAAGAAGGAAAGTTTTTGGTGAATCCTCAATGGATTCATACTGCAAATTTTATGTGGCAAAAGCAACCTGAAGATAATTTTCCCTGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

350

Amino Acids

40.78

Weight (kDa)

6.67

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	40 - 189	9.9e-25	NLI interacting factor-like phosphatase
BRCT	PF00533	260 - 332	5.9e-09	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	279 - 331	1.3e-06	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	43
AccII	CGCG	1 cut(s)	421
AciI	CCGC	1 cut(s)	863
AclWI	GGATC	3 cut(s)	377, 484, 893
AcsI	RAATTY	3 cut(s)	91, 632, 1006
AcuI	CTGAAG	2 cut(s)	30, 1050
AdeI	CACNNNGTG	1 cut(s)	241
AfaI	GTAC	2 cut(s)	346, 669
AfiI	CCNNNNNNNGG	4 cut(s)	255, 276, 367, 775
AflII	CTTAAG	2 cut(s)	194, 770
AflIII	ACRYGT	1 cut(s)	913
AgeI	ACCGGT	1 cut(s)	639
AgsI	TTSAA	6 cut(s)	103, 365, 622, 763, 787, 888
AleI	CACNNNNGTG	1 cut(s)	914
AluBI	AGCT	4 cut(s)	325, 376, 653, 871
AluI	AGCT	4 cut(s)	325, 376, 653, 871
Alw21I	GWGCWC	1 cut(s)	327
AlwI	GGATC	3 cut(s)	377, 484, 893
Ama87I	CYCGRG	2 cut(s)	348, 471
AoxI	GGCC	2 cut(s)	278, 589
ApeKI	GCWGC	3 cut(s)	376, 868, 923
ApoI	RAATTY	3 cut(s)	91, 632, 1006
AsiGI	ACCGGT	1 cut(s)	639
AspA2I	CCTAGG	1 cut(s)	47
AspLEI	GCGC	1 cut(s)	878
AsuC2I	CCSGG	1 cut(s)	387
AsuHPI	GGTGA	2 cut(s)	168, 991
AvaI	CYCGRG	2 cut(s)	348, 471
AvrII	CCTAGG	1 cut(s)	47
BanI	GGYRCC	1 cut(s)	43
BanII	GRGCYC	1 cut(s)	327
BarI	GAAGNNNNNNTAC	4 cut(s)	660, 692, 702, 734
BbsI	GAAGAC	1 cut(s)	629
Bbv12I	GWGCWC	1 cut(s)	327
BbvI	GCAGC	3 cut(s)	363, 880, 935
BccI	CCATC	2 cut(s)	853, 910
BceAI	ACGGC	1 cut(s)	265
BclI	TGATCA	1 cut(s)	214
BcnI	CCSGG	1 cut(s)	387
BfaI	CTAG	6 cut(s)	48, 87, 134, 455, 552, 573
BfoI	RGCGCY	1 cut(s)	879
BfrI	CTTAAG	2 cut(s)	194, 770
BglII	AGATCT	1 cut(s)	569
BisI	GCNGC	3 cut(s)	377, 869, 924
BlnI	CCTAGG	1 cut(s)	47
BlpI	GCTNAGC	1 cut(s)	372
BlsI	GCNGC	3 cut(s)	378, 870, 925
Bme1390I	CCNGG	1 cut(s)	387
BmeT110I	CYCGRG	2 cut(s)	348, 471
BmiI	GGNNCC	1 cut(s)	45
BmrFI	CCNGG	1 cut(s)	387
BmrI	ACTGGG	1 cut(s)	246
BmsI	GCATC	1 cut(s)	537
BmuI	ACTGGG	1 cut(s)	246
BpiI	GAAGAC	1 cut(s)	629
Bpu1102I	GCTNAGC	1 cut(s)	372
BpuMI	CCSGG	1 cut(s)	387
Bsa29I	ATCGAT	1 cut(s)	67
BsaBI	GATNNNNATC	1 cut(s)	843
BsaJI	CCNNGG	2 cut(s)	33, 47
BsaWI	WCCGGW	1 cut(s)	639
Bsc4I	CCNNNNNNNGG	4 cut(s)	255, 276, 367, 775
Bse118I	RCCGGY	1 cut(s)	639
Bse1I	ACTGG	2 cut(s)	252, 309
Bse3DI	GCAATG	1 cut(s)	82
Bse8I	GATNNNNATC	1 cut(s)	843
BseCI	ATCGAT	1 cut(s)	67
BseDI	CCNNGG	2 cut(s)	33, 47
BseGI	GGATG	2 cut(s)	58, 844
BseJI	GATNNNNATC	1 cut(s)	843
BseLI	CCNNNNNNNGG	4 cut(s)	255, 276, 367, 775
BseMI	GCAATG	1 cut(s)	82
BseMII	CTCAG	1 cut(s)	607
BseNI	ACTGG	2 cut(s)	252, 309
BseXI	GCAGC	3 cut(s)	363, 880, 935
BseYI	CCCAGC	1 cut(s)	871
Bsh1236I	CGCG	1 cut(s)	421
BshFI	GGCC	2 cut(s)	280, 591
BshNI	GGYRCC	1 cut(s)	43
BshTI	ACCGGT	1 cut(s)	639
BshVI	ATCGAT	1 cut(s)	67
BsiHKAI	GWGCWC	1 cut(s)	327
BsiHKCI	CYCGRG	2 cut(s)	348, 471
BsiSI	CCGG	2 cut(s)	387, 640
BslFI	GGGAC	1 cut(s)	545
BslI	CCNNNNNNNGG	4 cut(s)	255, 276, 367, 775
BsmFI	GGGAC	1 cut(s)	545
BsnI	GGCC	2 cut(s)	280, 591
BsoBI	CYCGRG	2 cut(s)	348, 471
Bsp1286I	GDGCHC	1 cut(s)	327
Bsp143I	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
Bsp1720I	GCTNAGC	1 cut(s)	372
BspACI	CCGC	1 cut(s)	863
BspANI	GGCC	2 cut(s)	280, 591
BspCNI	CTCAG	1 cut(s)	606
BspDI	ATCGAT	1 cut(s)	67
BspFNI	CGCG	1 cut(s)	421
BspLI	GGNNCC	1 cut(s)	45
BspPI	GGATC	3 cut(s)	377, 484, 893
BspT107I	GGYRCC	1 cut(s)	43
BspTI	CTTAAG	2 cut(s)	194, 770
BsrDI	GCAATG	1 cut(s)	82
BsrFI	RCCGGY	1 cut(s)	639
BsrI	ACTGG	2 cut(s)	252, 309
BssAI	RCCGGY	1 cut(s)	639
BssECI	CCNNGG	2 cut(s)	33, 47
BssMI	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
BssT1I	CCWWGG	2 cut(s)	33, 47
Bst4CI	ACNGT	2 cut(s)	723, 794
BstAFI	CTTAAG	2 cut(s)	194, 770
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstC8I	GCNNGC	2 cut(s)	306, 468
BstDEI	CTNAG	2 cut(s)	372, 593
BstENI	CCTNNNNNAGG	1 cut(s)	773
BstF5I	GGATG	2 cut(s)	58, 844
BstFNI	CGCG	1 cut(s)	421
BstH2I	RGCGCY	1 cut(s)	879
BstHHI	GCGC	1 cut(s)	878
BstKTI	GATC	7 cut(s)	67, 133, 217, 385, 492, 572, 901
BstMBI	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
BstMWI	GCNNNNNNNGC	2 cut(s)	659, 929
BstNSI	RCATGY	1 cut(s)	917
BstSCI	CCNGG	1 cut(s)	385
BstUI	CGCG	1 cut(s)	421
BstV1I	GCAGC	3 cut(s)	363, 880, 935
BstV2I	GAAGAC	1 cut(s)	629
BstX2I	RGATCY	1 cut(s)	569
BstXI	CCANNNNNNTGG	1 cut(s)	40
BstYI	RGATCY	1 cut(s)	569
Bsu15I	ATCGAT	1 cut(s)	67
BsuRI	GGCC	2 cut(s)	280, 591
BsuTUI	ATCGAT	1 cut(s)	67
BtsCI	GGATG	2 cut(s)	58, 844
Cac8I	GCNNGC	2 cut(s)	306, 468
CfoI	GCGC	1 cut(s)	878
Cfr10I	RCCGGY	1 cut(s)	639
ClaI	ATCGAT	1 cut(s)	67
Csp6I	GTAC	2 cut(s)	345, 668
CspAI	ACCGGT	1 cut(s)	639
CspCI	CAANNNNNGTGG	2 cut(s)	145, 180
CviAII	CATG	2 cut(s)	812, 914
CviQI	GTAC	2 cut(s)	345, 668
DdeI	CTNAG	2 cut(s)	372, 593
DpnI	GATC	7 cut(s)	66, 132, 216, 384, 491, 571, 900
DpnII	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
DraIII	CACNNNGTG	1 cut(s)	241
EciI	GGCGGA	1 cut(s)	878
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	2 cut(s)	33, 47
Eco24I	GRGCYC	1 cut(s)	327
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	2 cut(s)	30, 1050
Eco88I	CYCGRG	2 cut(s)	348, 471
EcoICRI	GAGCTC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	773
EcoT14I	CCWWGG	2 cut(s)	33, 47
EcoT38I	GRGCYC	1 cut(s)	327
ErhI	CCWWGG	2 cut(s)	33, 47
FaeI	CATG	2 cut(s)	815, 917
FalI	AAGNNNNNCTT	4 cut(s)	177, 209, 767, 799
FaqI	GGGAC	1 cut(s)	545
FatI	CATG	2 cut(s)	811, 913
FbaI	TGATCA	1 cut(s)	214
Fnu4HI	GCNGC	3 cut(s)	377, 869, 924
FokI	GGATG	2 cut(s)	65, 831
FriOI	GRGCYC	1 cut(s)	327
Fsp4HI	GCNGC	3 cut(s)	377, 869, 924
FspBI	CTAG	6 cut(s)	48, 87, 134, 455, 552, 573
GlaI	GCGC	1 cut(s)	877
GluI	GCNGC	3 cut(s)	377, 869, 924
GsaI	CCCAGC	1 cut(s)	875
HaeII	RGCGCY	1 cut(s)	879
HaeIII	GGCC	2 cut(s)	280, 591
HapII	CCGG	2 cut(s)	387, 640
HhaI	GCGC	1 cut(s)	878
Hin1II	CATG	2 cut(s)	815, 917
Hin6I	GCGC	1 cut(s)	876
HinP1I	GCGC	1 cut(s)	876
HinfI	GANTC	5 cut(s)	411, 451, 476, 982, 994
HpaII	CCGG	2 cut(s)	387, 640
HphI	GGTGA	2 cut(s)	168, 991
Hpy166II	GTNNAC	5 cut(s)	235, 244, 516, 605, 691
Hpy188I	TCNGA	3 cut(s)	10, 214, 616
Hpy188III	TCNNGA	6 cut(s)	128, 134, 350, 455, 760, 784
Hpy8I	GTNNAC	5 cut(s)	235, 244, 516, 605, 691
Hpy99I	CGWCG	1 cut(s)	185
HpyAV	CCTTC	3 cut(s)	769, 781, 959
HpyCH4III	ACNGT	2 cut(s)	723, 794
HpyCH4V	TGCA	5 cut(s)	226, 304, 662, 923, 1004
HpyF10VI	GCNNNNNNNGC	2 cut(s)	659, 929
HpyF3I	CTNAG	2 cut(s)	372, 593
Hsp92II	CATG	2 cut(s)	815, 917
HspAI	GCGC	1 cut(s)	876
Ksp22I	TGATCA	1 cut(s)	214
Kzo9I	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
LmnI	GCTCC	2 cut(s)	650, 865
Lsp1109I	GCAGC	3 cut(s)	363, 880, 935
LweI	GCATC	1 cut(s)	537
MaeI	CTAG	6 cut(s)	48, 87, 134, 455, 552, 573
MaeIII	GTNAC	3 cut(s)	174, 717, 907
MalI	GATC	7 cut(s)	66, 132, 216, 384, 491, 571, 900
MboI	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
MboII	GAAGA	4 cut(s)	197, 634, 868, 1043
MflI	RGATCY	1 cut(s)	569
MhlI	GDGCHC	1 cut(s)	327
MluCI	AATT	6 cut(s)	60, 91, 632, 798, 1006, 1036
MlyI	GAGTC	2 cut(s)	420, 460
MnlI	CCTC	6 cut(s)	270, 602, 744, 826, 832, 996
MseI	TTAA	4 cut(s)	195, 705, 771, 960
MslI	CAYNNNNRTG	1 cut(s)	914
MspA1I	CMGCKG	1 cut(s)	871
MspCI	CTTAAG	2 cut(s)	194, 770
MspI	CCGG	2 cut(s)	387, 640
MspR9I	CCNGG	1 cut(s)	387
MvnI	CGCG	1 cut(s)	421
MwoI	GCNNNNNNNGC	2 cut(s)	659, 929
NciI	CCSGG	1 cut(s)	387
NdeII	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
NlaIII	CATG	2 cut(s)	815, 917
NlaIV	GGNNCC	1 cut(s)	45
NmuCI	GTSAC	2 cut(s)	174, 907
NspI	RCATGY	1 cut(s)	917
OliI	CACNNNNGTG	1 cut(s)	914
PaeR7I	CTCGAG	1 cut(s)	348
PciI	ACATGT	1 cut(s)	913
PfeI	GAWTC	3 cut(s)	476, 982, 994
PfoI	TCCNGGA	1 cut(s)	385
PinAI	ACCGGT	1 cut(s)	639
PkrI	GCNGC	3 cut(s)	378, 870, 925
PleI	GAGTC	2 cut(s)	419, 459
PpsI	GAGTC	2 cut(s)	419, 459
PscI	ACATGT	1 cut(s)	913
Psp124BI	GAGCTC	1 cut(s)	327
PspFI	CCCAGC	1 cut(s)	871
PspN4I	GGNNCC	1 cut(s)	45
PsuI	RGATCY	1 cut(s)	569
PvuII	CAGCTG	1 cut(s)	871
RsaI	GTAC	2 cut(s)	346, 669
RsaNI	GTAC	2 cut(s)	345, 668
RseI	CAYNNNNRTG	1 cut(s)	914
SacI	GAGCTC	1 cut(s)	327
SaqAI	TTAA	4 cut(s)	195, 705, 771, 960
SatI	GCNGC	3 cut(s)	377, 869, 924
Sau3AI	GATC	7 cut(s)	64, 130, 214, 382, 489, 569, 898
SchI	GAGTC	2 cut(s)	420, 460
ScrFI	CCNGG	1 cut(s)	387
SduI	GDGCHC	1 cut(s)	327
SetI	ASST	7 cut(s)	327, 378, 610, 655, 660, 873, 1030
SfaNI	GCATC	1 cut(s)	537
Sfr274I	CTCGAG	1 cut(s)	348
SlaI	CTCGAG	1 cut(s)	348
SmiMI	CAYNNNNRTG	1 cut(s)	914
SmlI	CTYRAG	3 cut(s)	194, 348, 770
SmoI	CTYRAG	3 cut(s)	194, 348, 770
Sse9I	AATT	6 cut(s)	60, 91, 632, 798, 1006, 1036
SsiI	CCGC	1 cut(s)	863
SspMI	CTAG	6 cut(s)	48, 87, 134, 455, 552, 573
SstI	GAGCTC	1 cut(s)	327
StyD4I	CCNGG	1 cut(s)	385
StyI	CCWWGG	2 cut(s)	33, 47
TaaI	ACNGT	2 cut(s)	723, 794
TaqI	TCGA	6 cut(s)	67, 349, 673, 831, 897, 934
TaqII	GACCGA	1 cut(s)	641
TasI	AATT	6 cut(s)	60, 91, 632, 798, 1006, 1036
TatI	WGTACW	1 cut(s)	667
TfiI	GAWTC	3 cut(s)	476, 982, 994
Tru1I	TTAA	4 cut(s)	195, 705, 771, 960
Tru9I	TTAA	4 cut(s)	195, 705, 771, 960
TseFI	GTSAC	2 cut(s)	174, 907
TseI	GCWGC	3 cut(s)	376, 868, 923
Tsp45I	GTSAC	2 cut(s)	174, 907
TspDTI	ATGAA	5 cut(s)	93, 107, 645, 723, 986
Vha464I	CTTAAG	2 cut(s)	194, 770
XagI	CCTNNNNNAGG	1 cut(s)	773
XapI	RAATTY	3 cut(s)	91, 632, 1006
XbaI	TCTAGA	2 cut(s)	133, 454
XceI	RCATGY	1 cut(s)	917
XcmI	CCANNNNNNNNNTGG	1 cut(s)	337
XhoI	CTCGAG	1 cut(s)	348
XmaJI	CCTAGG	1 cut(s)	47
XspI	CTAG	6 cut(s)	48, 87, 134, 455, 552, 573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.