Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Forward (+)

536855 .. 540731

Gene Structure 3877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g01060.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGAGTCTTGCCGAGTCTCCGGTGCACTCTTCCAGCAGTGATGGATTTGCTGGCTTTCTTGAGACGGAACTGGAGTCAGGCTCTTCGGAGTCGTCACCGGATGAGGAATGTAAAGCAGCAGTCGGTGATGATGATGGTGGCAGTGAATCCAGTGATGTTGAAAGTGAGAGCAGGGTAAAACGGAGGAAGGTAGAGAATGTGGAAATCTTGGAAGAAGCCAATGCGTTGACTTCGCAAGCAGTCTCTGAAGAAATTTCAGAAGCATCTGGAGTGGATGATTTGTGTGCACATCCTGGATCTTTTGGAGATATGTGCTTTCTTTGTGGCCAGAGGCTGATTGAGCAGTCTGGTGTGACATTTGGGTACATACACAAGGGATTAAGACTTAATGACGGAGAAATCGACCGGTTACGCAACACGGACATTAAGAAATCGCTAAATAATAAGAAACTTTATTTGGTACTTGATCTTGATCATACACTACTAAATACCACCCTGCTGAATCATGTGACGGCAAAGGAAGAATATTTAATGTGCCCACCAGATTCTCTGCCAGATGTTTTGAAAGACAGCCTCTTCAGACTGGATTTTATGCGTATGATGACCAAGTTAAGGCCTTTCATTAGGACATTTTTGAAGGAAGCCAGTGAAATATTTGAAATGTACATATATACGATGGGTGACCGAGCCTATGCACTGGAAATGGCCAAGTTGCTTGATCCCAAAAAAGAGTACTTTGGTGATCGAGTGATATCGCGTGATGATGGCACCCAAAGACATCAAAAGGGTCTAGATATTGTGCTTGGGCAAGAAAGTGCTGTTTTGATATTGGATGATACAGAAAATGCATGGATCAAGCACAAGGACAATCTTATCTTGATGGAGAGATATCATTTCTTTAGATCTAGTTGTGCCCAATTTGGGTTCACATGTGAGTCTCTTTCAGAGTTGAAGAGTGACGAGAGTGAGCCTGAAGGAGCTCTTGCAAATGTTCTCGATCTTCTTAAACGAATCCACAAGATGTTCTTTTATGATCTGGGAGGCAATCTTGTAGATAGAGACGTGAGGCAGGTTCTGAAAATTGTTAGGAAGGAAGTTCTGAATGGGTGCAAAGTTGTTTTCAGCCGTATAATTCCTTCAAAAGTCCTGGCTAGTAGTCATCACTTGTGGAAGATGGCAGAGCAGCTGGGAGCCATATGCTCAACCGAAGTGGATTCAACGGTGACCCATGTAGTTGCATTAGATGCTGGAACAGAAAAGTCTCGCTGGGCAGTGAAACATAACAAATTTCTGGTCCATCCTCGGTGGCTTGAAGCAGCAAATTATATGTGGCAAAAGCAAGCTGAAGAGAAGTTTCCAGTGACTGAAACAAAAATGGTAACTCATACCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

465

Amino Acids

52.42

Weight (kDa)

5.24

Isoelectric Point (pI)

53.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	152 - 298	7.8e-26	NLI interacting factor-like phosphatase
BRCT	PF00533	365 - 438	4.8e-07	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	386 - 436	2e-06	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1060
AccB1I	GGYRCC	1 cut(s)	767
AccII	CGCG	1 cut(s)	757
AclWI	GGATC	3 cut(s)	304, 713, 860
AcoI	YGGCCR	2 cut(s)	325, 705
AcsI	RAATTY	2 cut(s)	252, 1286
AcuI	CTGAAG	4 cut(s)	267, 562, 993, 1365
AfaI	GTAC	4 cut(s)	365, 462, 665, 734
AfiI	CCNNNNNNNGG	2 cut(s)	612, 921
AflIII	ACRYGT	1 cut(s)	929
AgeI	ACCGGT	1 cut(s)	405
AgsI	TTSAA	8 cut(s)	161, 565, 637, 659, 952, 1140, 1218, 1313
AjiI	CACGTC	1 cut(s)	1063
AjnI	CCWGG	2 cut(s)	292, 1146
AjuI	GAANNNNNNNTTGG	2 cut(s)	440, 472
AluBI	AGCT	3 cut(s)	980, 1186, 1343
AluI	AGCT	3 cut(s)	980, 1186, 1343
Alw21I	GWGCWC	3 cut(s)	27, 289, 982
Alw26I	GTCTC	6 cut(s)	21, 56, 247, 942, 1053, 1266
Alw44I	GTGCAC	2 cut(s)	23, 285
AlwI	GGATC	3 cut(s)	304, 713, 860
AlwNI	CAGNNNCTG	4 cut(s)	245, 334, 1075, 1364
AoxI	GGCC	3 cut(s)	325, 614, 705
ApaLI	GTGCAC	2 cut(s)	23, 285
ApeKI	GCWGC	3 cut(s)	116, 1183, 1316
ApoI	RAATTY	2 cut(s)	252, 1286
ArsI	GACNNNNNNTTYG	2 cut(s)	1278, 1310
AsiGI	ACCGGT	1 cut(s)	405
AspS9I	GGNCC	1 cut(s)	1294
AsuHPI	GGTGA	5 cut(s)	87, 137, 692, 752, 1234
AvaII	GGWCC	1 cut(s)	1294
BaeGI	GKGCMC	4 cut(s)	27, 289, 539, 916
BalI	TGGCCA	2 cut(s)	327, 707
BanI	GGYRCC	1 cut(s)	767
BanII	GRGCYC	1 cut(s)	982
BarI	GAAGNNNNNNTAC	2 cut(s)	1120, 1152
Bbv12I	GWGCWC	3 cut(s)	27, 289, 982
BbvI	GCAGC	3 cut(s)	128, 1195, 1328
BccI	CCATC	7 cut(s)	35, 128, 670, 758, 874, 1168, 1305
BceAI	ACGGC	2 cut(s)	528, 1110
BciT130I	CCWGG	2 cut(s)	294, 1148
BclI	TGATCA	1 cut(s)	472
BcoDI	GTCTC	6 cut(s)	21, 56, 247, 942, 1053, 1266
BfaI	CTAG	3 cut(s)	791, 906, 1152
BfuAI	ACCTGC	1 cut(s)	1060
BglII	AGATCT	1 cut(s)	902
BisI	GCNGC	3 cut(s)	117, 1184, 1317
BlsI	GCNGC	3 cut(s)	118, 1185, 1318
BmcAI	AGTACT	1 cut(s)	734
Bme1390I	CCNGG	2 cut(s)	294, 1148
Bme18I	GGWCC	1 cut(s)	1294
BmgBI	CACGTC	1 cut(s)	1063
BmgT120I	GGNCC	1 cut(s)	1294
BmiI	GGNNCC	2 cut(s)	769, 1192
BmrFI	CCNGG	2 cut(s)	294, 1148
BmsI	GCATC	2 cut(s)	272, 1234
BplI	GAGNNNNNCTC	2 cut(s)	65, 97
BpmI	CTGGAG	2 cut(s)	92, 288
BpuEI	CTTGAG	1 cut(s)	80
BsaBI	GATNNNNATC	1 cut(s)	471
BsaJI	CCNNGG	1 cut(s)	1301
BsaWI	WCCGGW	3 cut(s)	19, 97, 405
Bsc4I	CCNNNNNNNGG	2 cut(s)	612, 921
Bse118I	RCCGGY	1 cut(s)	405
Bse1I	ACTGG	6 cut(s)	75, 150, 588, 645, 702, 1358
Bse8I	GATNNNNATC	1 cut(s)	471
BseBI	CCWGG	2 cut(s)	294, 1148
BseDI	CCNNGG	1 cut(s)	1301
BseGI	GGATG	5 cut(s)	106, 280, 289, 838, 1297
BseJI	GATNNNNATC	1 cut(s)	471
BseLI	CCNNNNNNNGG	2 cut(s)	612, 921
BseNI	ACTGG	6 cut(s)	75, 150, 588, 645, 702, 1358
BseSI	GKGCMC	4 cut(s)	27, 289, 539, 916
BseXI	GCAGC	3 cut(s)	128, 1195, 1328
BseYI	CCCAGC	2 cut(s)	1186, 1266
Bsh1236I	CGCG	1 cut(s)	757
Bsh1285I	CGRYCG	1 cut(s)	406
BshFI	GGCC	3 cut(s)	327, 616, 707
BshNI	GGYRCC	1 cut(s)	767
BshTI	ACCGGT	1 cut(s)	405
BsiEI	CGRYCG	1 cut(s)	406
BsiHKAI	GWGCWC	3 cut(s)	27, 289, 982
BsiSI	CCGG	3 cut(s)	20, 98, 406
BslI	CCNNNNNNNGG	2 cut(s)	612, 921
BsmAI	GTCTC	6 cut(s)	21, 56, 247, 942, 1053, 1266
BsmBI	CGTCTC	2 cut(s)	56, 1053
BsnI	GGCC	3 cut(s)	327, 616, 707
Bsp1286I	GDGCHC	5 cut(s)	27, 289, 539, 916, 982
Bsp1407I	TGTACA	1 cut(s)	663
Bsp143I	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
BspANI	GGCC	3 cut(s)	327, 616, 707
BspFNI	CGCG	1 cut(s)	757
BspLI	GGNNCC	2 cut(s)	769, 1192
BspMI	ACCTGC	1 cut(s)	1060
BspPI	GGATC	3 cut(s)	304, 713, 860
BspQI	GCTCTTC	1 cut(s)	88
BspT107I	GGYRCC	1 cut(s)	767
BsrFI	RCCGGY	1 cut(s)	405
BsrGI	TGTACA	1 cut(s)	663
BsrI	ACTGG	6 cut(s)	75, 150, 588, 645, 702, 1358
BssAI	RCCGGY	1 cut(s)	405
BssECI	CCNNGG	1 cut(s)	1301
BssMI	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
Bst2UI	CCWGG	2 cut(s)	294, 1148
Bst4CI	ACNGT	1 cut(s)	1222
Bst6I	CTCTTC	5 cut(s)	34, 88, 581, 947, 1341
BstAPI	GCANNNNNTGC	1 cut(s)	1244
BstAUI	TGTACA	1 cut(s)	663
BstC8I	GCNNGC	3 cut(s)	52, 237, 1341
BstEII	GGTNACC	2 cut(s)	680, 1222
BstF5I	GGATG	5 cut(s)	106, 280, 289, 838, 1297
BstFNI	CGCG	1 cut(s)	757
BstKTI	GATC	9 cut(s)	299, 469, 475, 721, 745, 855, 905, 1000, 1036
BstMAI	GTCTC	6 cut(s)	21, 56, 247, 942, 1053, 1266
BstMBI	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
BstMCI	CGRYCG	1 cut(s)	406
BstMWI	GCNNNNNNNGC	2 cut(s)	340, 1244
BstNI	CCWGG	2 cut(s)	294, 1148
BstNSI	RCATGY	1 cut(s)	933
BstPI	GGTNACC	2 cut(s)	680, 1222
BstSCI	CCNGG	2 cut(s)	292, 1146
BstSLI	GKGCMC	4 cut(s)	27, 289, 539, 916
BstUI	CGCG	1 cut(s)	757
BstV1I	GCAGC	3 cut(s)	128, 1195, 1328
BstX2I	RGATCY	2 cut(s)	296, 902
BstYI	RGATCY	2 cut(s)	296, 902
BsuRI	GGCC	3 cut(s)	327, 616, 707
BtrI	CACGTC	1 cut(s)	1063
BtsCI	GGATG	5 cut(s)	106, 280, 289, 838, 1297
BtsI	GCAGTG	3 cut(s)	43, 148, 1278
BtsIMutI	CAGTG	7 cut(s)	43, 148, 157, 652, 695, 1278, 1365
BveI	ACCTGC	1 cut(s)	1060
Cac8I	GCNNGC	3 cut(s)	52, 237, 1341
CaiI	CAGNNNCTG	4 cut(s)	245, 334, 1075, 1364
Cfr10I	RCCGGY	1 cut(s)	405
Cfr13I	GGNCC	1 cut(s)	1294
Csp6I	GTAC	4 cut(s)	364, 461, 664, 733
CspAI	ACCGGT	1 cut(s)	405
CspCI	CAANNNNNGTGG	2 cut(s)	1191, 1226
CviAII	CATG	4 cut(s)	506, 849, 930, 1229
CviQI	GTAC	4 cut(s)	364, 461, 664, 733
DpnI	GATC	9 cut(s)	298, 468, 474, 720, 744, 854, 904, 999, 1035
DpnII	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
EaeI	YGGCCR	2 cut(s)	325, 705
Eam1104I	CTCTTC	5 cut(s)	34, 88, 581, 947, 1341
EarI	CTCTTC	5 cut(s)	34, 88, 581, 947, 1341
Ecl136II	GAGCTC	1 cut(s)	980
Eco147I	AGGCCT	1 cut(s)	616
Eco24I	GRGCYC	1 cut(s)	982
Eco32I	GATATC	2 cut(s)	753, 890
Eco47I	GGWCC	1 cut(s)	1294
Eco53kI	GAGCTC	1 cut(s)	980
Eco57I	CTGAAG	4 cut(s)	267, 562, 993, 1365
Eco91I	GGTNACC	2 cut(s)	680, 1222
EcoICRI	GAGCTC	1 cut(s)	980
EcoO65I	GGTNACC	2 cut(s)	680, 1222
EcoRII	CCWGG	2 cut(s)	292, 1146
EcoRV	GATATC	2 cut(s)	753, 890
EcoT22I	ATGCAT	1 cut(s)	850
EcoT38I	GRGCYC	1 cut(s)	982
Esp3I	CGTCTC	2 cut(s)	56, 1053
FaeI	CATG	4 cut(s)	509, 852, 933, 1232
FalI	AAGNNNNNCTT	4 cut(s)	966, 998, 1010, 1042
FatI	CATG	4 cut(s)	505, 848, 929, 1228
FauNDI	CATATG	1 cut(s)	1196
FbaI	TGATCA	1 cut(s)	472
Fnu4HI	GCNGC	3 cut(s)	117, 1184, 1317
FokI	GGATG	5 cut(s)	113, 276, 287, 845, 1284
FriOI	GRGCYC	1 cut(s)	982
Fsp4HI	GCNGC	3 cut(s)	117, 1184, 1317
FspBI	CTAG	3 cut(s)	791, 906, 1152
GluI	GCNGC	3 cut(s)	117, 1184, 1317
GsaI	CCCAGC	2 cut(s)	1190, 1270
GsuI	CTGGAG	2 cut(s)	92, 288
HaeIII	GGCC	3 cut(s)	327, 616, 707
HapII	CCGG	3 cut(s)	20, 98, 406
Hin1II	CATG	4 cut(s)	509, 852, 933, 1232
HincII	GTYRAC	1 cut(s)	228
HindII	GTYRAC	1 cut(s)	228
HpaII	CCGG	3 cut(s)	20, 98, 406
HphI	GGTGA	5 cut(s)	87, 137, 692, 752, 1234
Hpy166II	GTNNAC	4 cut(s)	25, 228, 287, 927
Hpy188I	TCNGA	7 cut(s)	88, 247, 259, 581, 946, 1077, 1101
Hpy188III	TCNNGA	6 cut(s)	59, 267, 470, 791, 877, 995
Hpy8I	GTNNAC	4 cut(s)	25, 228, 287, 927
HpyAV	CCTTC	5 cut(s)	181, 631, 968, 1084, 1146
HpyCH4III	ACNGT	1 cut(s)	1222
HpyCH4IV	ACGT	1 cut(s)	1062
HpyCH4V	TGCA	7 cut(s)	25, 287, 695, 848, 986, 1110, 1238
HpyF10VI	GCNNNNNNNGC	2 cut(s)	340, 1244
HpySE526I	ACGT	1 cut(s)	1062
Hsp92II	CATG	4 cut(s)	509, 852, 933, 1232
Ksp22I	TGATCA	1 cut(s)	472
Kzo9I	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
LguI	GCTCTTC	1 cut(s)	88
LmnI	GCTCC	2 cut(s)	977, 1190
Lsp1109I	GCAGC	3 cut(s)	128, 1195, 1328
LweI	GCATC	2 cut(s)	272, 1234
MaeI	CTAG	3 cut(s)	791, 906, 1152
MaeII	ACGT	1 cut(s)	1062
MaeIII	GTNAC	9 cut(s)	93, 352, 408, 508, 680, 956, 1222, 1360, 1378
MalI	GATC	9 cut(s)	298, 468, 474, 720, 744, 854, 904, 999, 1035
MboI	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
MflI	RGATCY	2 cut(s)	296, 902
MhlI	GDGCHC	5 cut(s)	27, 289, 539, 916, 982
MlsI	TGGCCA	2 cut(s)	327, 707
MluCI	AATT	6 cut(s)	252, 917, 1080, 1131, 1286, 1321
MluNI	TGGCCA	2 cut(s)	327, 707
MlyI	GAGTC	5 cut(s)	13, 23, 83, 98, 944
MnlI	CCTC	7 cut(s)	97, 177, 324, 584, 1034, 1059, 1311
Mox20I	TGGCCA	2 cut(s)	327, 707
Mph1103I	ATGCAT	1 cut(s)	850
MscI	TGGCCA	2 cut(s)	327, 707
MseI	TTAA	6 cut(s)	380, 387, 426, 530, 611, 1005
Msp20I	TGGCCA	2 cut(s)	327, 707
MspA1I	CMGCKG	1 cut(s)	1186
MspI	CCGG	3 cut(s)	20, 98, 406
MspR9I	CCNGG	2 cut(s)	294, 1148
MvaI	CCWGG	2 cut(s)	294, 1148
MvnI	CGCG	1 cut(s)	757
MwoI	GCNNNNNNNGC	2 cut(s)	340, 1244
NdeI	CATATG	1 cut(s)	1196
NdeII	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
NlaIII	CATG	4 cut(s)	509, 852, 933, 1232
NlaIV	GGNNCC	2 cut(s)	769, 1192
NmeAIII	GCCGAG	1 cut(s)	37
NmuCI	GTSAC	7 cut(s)	93, 352, 508, 680, 956, 1222, 1360
NsiI	ATGCAT	1 cut(s)	850
NspI	RCATGY	1 cut(s)	933
PceI	AGGCCT	1 cut(s)	616
PciI	ACATGT	1 cut(s)	929
PciSI	GCTCTTC	1 cut(s)	88
PcsI	WCGNNNNNNNCGW	1 cut(s)	399
PfeI	GAWTC	5 cut(s)	146, 502, 545, 1011, 1214
PfoI	TCCNGGA	1 cut(s)	292
PinAI	ACCGGT	1 cut(s)	405
PkrI	GCNGC	3 cut(s)	118, 1185, 1318
PleI	GAGTC	5 cut(s)	12, 22, 82, 97, 943
PpsI	GAGTC	5 cut(s)	12, 22, 82, 97, 943
PscI	ACATGT	1 cut(s)	929
Psp124BI	GAGCTC	1 cut(s)	982
Psp6I	CCWGG	2 cut(s)	292, 1146
PspEI	GGTNACC	2 cut(s)	680, 1222
PspFI	CCCAGC	2 cut(s)	1186, 1266
PspGI	CCWGG	2 cut(s)	292, 1146
PspN4I	GGNNCC	2 cut(s)	769, 1192
PspPI	GGNCC	1 cut(s)	1294
PstNI	CAGNNNCTG	4 cut(s)	245, 334, 1075, 1364
PsuI	RGATCY	2 cut(s)	296, 902
PvuII	CAGCTG	1 cut(s)	1186
RsaI	GTAC	4 cut(s)	365, 462, 665, 734
RsaNI	GTAC	4 cut(s)	364, 461, 664, 733
SacI	GAGCTC	1 cut(s)	982
SapI	GCTCTTC	1 cut(s)	88
SaqAI	TTAA	6 cut(s)	380, 387, 426, 530, 611, 1005
SatI	GCNGC	3 cut(s)	117, 1184, 1317
Sau3AI	GATC	9 cut(s)	296, 466, 472, 718, 742, 852, 902, 997, 1033
Sau96I	GGNCC	1 cut(s)	1294
ScaI	AGTACT	1 cut(s)	734
SchI	GAGTC	5 cut(s)	13, 23, 83, 98, 944
ScrFI	CCNGG	2 cut(s)	294, 1148
SduI	GDGCHC	5 cut(s)	27, 289, 539, 916, 982
SetI	ASST	6 cut(s)	192, 982, 1065, 1074, 1188, 1345
SfaNI	GCATC	2 cut(s)	272, 1234
SinI	GGWCC	1 cut(s)	1294
SmlI	CTYRAG	1 cut(s)	59
SmoI	CTYRAG	1 cut(s)	59
Sse9I	AATT	6 cut(s)	252, 917, 1080, 1131, 1286, 1321
SseBI	AGGCCT	1 cut(s)	616
SspI	AATATT	2 cut(s)	527, 654
SspMI	CTAG	3 cut(s)	791, 906, 1152
SstI	GAGCTC	1 cut(s)	982
StuI	AGGCCT	1 cut(s)	616
StyD4I	CCNGG	2 cut(s)	292, 1146
TaaI	ACNGT	1 cut(s)	1222
TaiI	ACGT	1 cut(s)	1065
TaqI	TCGA	3 cut(s)	402, 745, 996
TaqII	GACCGA	1 cut(s)	699
TasI	AATT	6 cut(s)	252, 917, 1080, 1131, 1286, 1321
TatI	WGTACW	2 cut(s)	663, 732
TfiI	GAWTC	5 cut(s)	146, 502, 545, 1011, 1214
Tru1I	TTAA	6 cut(s)	380, 387, 426, 530, 611, 1005
Tru9I	TTAA	6 cut(s)	380, 387, 426, 530, 611, 1005
TscAI	CASTG	7 cut(s)	43, 148, 157, 652, 702, 1278, 1365
TseFI	GTSAC	7 cut(s)	93, 352, 508, 680, 956, 1222, 1360
TseI	GCWGC	3 cut(s)	116, 1183, 1316
Tsp45I	GTSAC	7 cut(s)	93, 352, 508, 680, 956, 1222, 1360
TspDTI	ATGAA	1 cut(s)	610
TspGWI	ACGGA	4 cut(s)	80, 196, 408, 434
TspRI	CASTG	7 cut(s)	43, 148, 157, 652, 702, 1278, 1365
VneI	GTGCAC	2 cut(s)	23, 285
VpaK11BI	GGWCC	1 cut(s)	1294
XapI	RAATTY	2 cut(s)	252, 1286
XbaI	TCTAGA	1 cut(s)	790
XceI	RCATGY	1 cut(s)	933
XspI	CTAG	3 cut(s)	791, 906, 1152
ZrmI	AGTACT	1 cut(s)	734
Zsp2I	ATGCAT	1 cut(s)	850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.