Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Forward (+)

1092729 .. 1097338

Gene Structure 4610 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46135

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1275 bp

ATGAAGGAGATAAAGCAGCTGATGACGATGGCAGTGATGTTGAAAGTGAGAGCAGGTGTGATAAAAAGGCGTAAGGTAGAGAATCTGGAAAGCTTAGAGGAAACCGTTGCGTCAACTTCACAAGGACTCTCAGAAGAAAAGTCAGAAGCAACTGCAATAGAGGATATGTGTGCACATCCTGGTTCATTTGGAGATATGTGTTTTCTTTGTGGCCAGAGGTTGATTGAGCAGTCTGGTGTGACATTTGGGTACATTCACAAGGGATTAAGACTTAATAATGATGAAATCGACCGGTTACGCAACACTGACATTAAGAAATCGCTAAATAATAAGAAACTTTATTTGGTACTTGATCTTGATCATACGCTGCTAAATTCCACCCAGCTGAATCATATGACGGCAGAGGAAGAATATTTGATGAGCCCACCAGATTCTCTGCCAGATGTTTTGAAAGGCAGCCTCTTCAGACTAGACTTTATGCGCATGATGACCAAGTTAAGGCCCTTCATTAAGACATTTTTGAAGGAAGCCAGTGAAATATTTGAAATGTATGTGTATACAATGGGTGACCGAGCCTATGCATTGGAAATGGCCAAGTTGCTTGATCCCAAAAAAGAGTACTTTGGTGATAGAGTGATATCACGCGATGATGGCACCCAAAAACATCAAAAGGGTCTAGATATTGTGCTTGGGCAAGAAAGTGCTGTTTTGATACTGGATGATACAGAGAATGCGTGGATAAAGCACAAGGACAATCTAATCTTGATGGAAAGATATCATTTCTTTAGATCTAGTTGTGCCCAATTTGGGTTCAATTGTGAGTCTCTTTCGGAGTTGAAGAGTGATGAGTGTGAGCCTGAAGGAGCTCTTGCAAATGTTCTTGACCTTCTTAAGCGAATTCACAAGATTTTCTTTTATGAATTGGAAGGCAATCTTATAGATAGAGATGTGAGGCAGGTTCTGAAAACCGTTAGAAAGGAAGTTTTGAAGGGGTGCAAAGTTGTGTTCAGCCGTATAATTCCTTCAAAAGTCCAGGCTGATAGTCATCACCTGTGGAAGATGGCAGAGCAGCTGGGAGCCATATGTTCAACCGAGGTGGATTCATCAGTGACCCATGTAGTTGCATTAGATGCGGGAACTGAAAAGTCTCGCTGGGCAGTGAAACAGAATAAGTTTTTGGTCCATCCTCTCTGGCTGGAAGCAGTGAATTATATGTGGCGAAAGCAACCGGAAGAGAAGTTTCCTGTCACTGAAACGAAATCGAAAACCCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

424

Amino Acids

48.73

Weight (kDa)

6.49

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	114 - 260	1.2e-26	NLI interacting factor-like phosphatase
BRCT	PF00533	327 - 400	1.1e-06	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	346 - 398	3.5e-07	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	44
Acc16I	TGCGCA	1 cut(s)	482
Acc36I	ACCTGC	2 cut(s)	44, 946
AccB1I	GGYRCC	1 cut(s)	653
AccI	GTMKAC	1 cut(s)	557
AccII	CGCG	1 cut(s)	645
AciI	CCGC	1 cut(s)	1133
AclWI	GGATC	1 cut(s)	599
AcoI	YGGCCR	2 cut(s)	211, 591
AcsI	RAATTY	2 cut(s)	373, 897
AcuI	CTGAAG	2 cut(s)	448, 879
AfaI	GTAC	3 cut(s)	251, 348, 620
AfiI	CCNNNNNNNGG	2 cut(s)	498, 807
AflII	CTTAAG	1 cut(s)	890
AgeI	ACCGGT	1 cut(s)	291
AgsI	TTSAA	9 cut(s)	43, 451, 523, 545, 814, 838, 988, 1026, 1089
AjnI	CCWGG	2 cut(s)	178, 1032
AjuI	GAANNNNNNNTTGG	4 cut(s)	326, 358, 1160, 1192
AluBI	AGCT	5 cut(s)	19, 93, 385, 866, 1072
AluI	AGCT	5 cut(s)	19, 93, 385, 866, 1072
Alw21I	GWGCWC	2 cut(s)	175, 868
Alw26I	GTCTC	2 cut(s)	828, 1152
Alw44I	GTGCAC	1 cut(s)	171
AlwI	GGATC	1 cut(s)	599
AlwNI	CAGNNNCTG	1 cut(s)	961
AoxI	GGCC	3 cut(s)	211, 500, 591
ApaLI	GTGCAC	1 cut(s)	171
ApeKI	GCWGC	4 cut(s)	16, 367, 456, 1069
ApoI	RAATTY	2 cut(s)	373, 897
AsiGI	ACCGGT	1 cut(s)	291
AspLEI	GCGC	1 cut(s)	483
AspS9I	GGNCC	2 cut(s)	501, 1180
AsuHPI	GGTGA	3 cut(s)	578, 638, 1040
AvaII	GGWCC	1 cut(s)	1180
BaeGI	GKGCMC	2 cut(s)	175, 802
BalI	TGGCCA	2 cut(s)	213, 593
BanI	GGYRCC	1 cut(s)	653
BanII	GRGCYC	2 cut(s)	425, 868
BarI	GAAGNNNNNNTAC	2 cut(s)	1006, 1038
Bbv12I	GWGCWC	2 cut(s)	175, 868
BbvI	GCAGC	4 cut(s)	28, 354, 468, 1081
BccI	CCATC	5 cut(s)	22, 644, 760, 1054, 1191
BceAI	ACGGC	2 cut(s)	414, 996
BciT130I	CCWGG	2 cut(s)	180, 1034
BclI	TGATCA	1 cut(s)	358
BcoDI	GTCTC	2 cut(s)	828, 1152
BfaI	CTAG	3 cut(s)	470, 677, 792
BfrI	CTTAAG	1 cut(s)	890
BfuAI	ACCTGC	2 cut(s)	44, 946
BglII	AGATCT	1 cut(s)	788
BisI	GCNGC	4 cut(s)	17, 368, 457, 1070
BlsI	GCNGC	4 cut(s)	18, 369, 458, 1071
BmcAI	AGTACT	1 cut(s)	620
Bme1390I	CCNGG	2 cut(s)	180, 1034
Bme18I	GGWCC	1 cut(s)	1180
BmgT120I	GGNCC	2 cut(s)	501, 1180
BmiI	GGNNCC	2 cut(s)	655, 1078
BmrFI	CCNGG	2 cut(s)	180, 1034
BmsI	GCATC	1 cut(s)	1120
BsaBI	GATNNNNATC	2 cut(s)	357, 1044
BsaJI	CCNNGG	1 cut(s)	1092
BsaWI	WCCGGW	2 cut(s)	291, 1228
Bsc4I	CCNNNNNNNGG	2 cut(s)	498, 807
Bse118I	RCCGGY	1 cut(s)	291
Bse1I	ACTGG	2 cut(s)	531, 720
Bse8I	GATNNNNATC	2 cut(s)	357, 1044
BseBI	CCWGG	2 cut(s)	180, 1034
BseDI	CCNNGG	1 cut(s)	1092
BseGI	GGATG	3 cut(s)	175, 724, 1183
BseJI	GATNNNNATC	2 cut(s)	357, 1044
BseLI	CCNNNNNNNGG	2 cut(s)	498, 807
BseMII	CTCAG	1 cut(s)	144
BseNI	ACTGG	2 cut(s)	531, 720
BseSI	GKGCMC	2 cut(s)	175, 802
BseXI	GCAGC	4 cut(s)	28, 354, 468, 1081
BseYI	CCCAGC	3 cut(s)	381, 1072, 1152
Bsh1236I	CGCG	1 cut(s)	645
Bsh1285I	CGRYCG	1 cut(s)	292
BshFI	GGCC	3 cut(s)	213, 502, 593
BshNI	GGYRCC	1 cut(s)	653
BshTI	ACCGGT	1 cut(s)	291
BsiEI	CGRYCG	1 cut(s)	292
BsiHKAI	GWGCWC	2 cut(s)	175, 868
BsiSI	CCGG	2 cut(s)	292, 1229
BslI	CCNNNNNNNGG	2 cut(s)	498, 807
BsmAI	GTCTC	2 cut(s)	828, 1152
BsmI	GAATGC	1 cut(s)	736
BsnI	GGCC	3 cut(s)	213, 502, 593
Bsp1286I	GDGCHC	4 cut(s)	175, 425, 802, 868
Bsp143I	GATC	4 cut(s)	352, 358, 604, 788
BspACI	CCGC	1 cut(s)	1133
BspANI	GGCC	3 cut(s)	213, 502, 593
BspCNI	CTCAG	1 cut(s)	143
BspFNI	CGCG	1 cut(s)	645
BspLI	GGNNCC	2 cut(s)	655, 1078
BspMI	ACCTGC	2 cut(s)	44, 946
BspPI	GGATC	1 cut(s)	599
BspT107I	GGYRCC	1 cut(s)	653
BspTI	CTTAAG	1 cut(s)	890
BsrFI	RCCGGY	1 cut(s)	291
BsrI	ACTGG	2 cut(s)	531, 720
BssAI	RCCGGY	1 cut(s)	291
BssECI	CCNNGG	1 cut(s)	1092
BssMI	GATC	4 cut(s)	352, 358, 604, 788
BssNAI	GTATAC	1 cut(s)	558
Bst1107I	GTATAC	1 cut(s)	558
Bst2UI	CCWGG	2 cut(s)	180, 1034
Bst4CI	ACNGT	2 cut(s)	106, 970
Bst6I	CTCTTC	3 cut(s)	467, 833, 1227
BstAFI	CTTAAG	1 cut(s)	890
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstDEI	CTNAG	2 cut(s)	94, 130
BstEII	GGTNACC	1 cut(s)	566
BstF5I	GGATG	3 cut(s)	175, 724, 1183
BstFNI	CGCG	1 cut(s)	645
BstHHI	GCGC	1 cut(s)	483
BstKTI	GATC	4 cut(s)	355, 361, 607, 791
BstMAI	GTCTC	2 cut(s)	828, 1152
BstMBI	GATC	4 cut(s)	352, 358, 604, 788
BstMCI	CGRYCG	1 cut(s)	292
BstMWI	GCNNNNNNNGC	2 cut(s)	651, 1130
BstNI	CCWGG	2 cut(s)	180, 1034
BstPI	GGTNACC	1 cut(s)	566
BstSCI	CCNGG	2 cut(s)	178, 1032
BstSLI	GKGCMC	2 cut(s)	175, 802
BstUI	CGCG	1 cut(s)	645
BstV1I	GCAGC	4 cut(s)	28, 354, 468, 1081
BstX2I	RGATCY	1 cut(s)	788
BstYI	RGATCY	1 cut(s)	788
BstZ17I	GTATAC	1 cut(s)	558
BsuRI	GGCC	3 cut(s)	213, 502, 593
BtgZI	GCGATG	1 cut(s)	660
BtsCI	GGATG	3 cut(s)	175, 724, 1183
BtsI	GCAGTG	3 cut(s)	39, 1164, 1209
BtsIMutI	CAGTG	7 cut(s)	39, 303, 538, 1113, 1164, 1209, 1248
BveI	ACCTGC	2 cut(s)	44, 946
CaiI	CAGNNNCTG	1 cut(s)	961
CfoI	GCGC	1 cut(s)	483
Cfr10I	RCCGGY	1 cut(s)	291
Cfr13I	GGNCC	2 cut(s)	501, 1180
CseI	GACGC	1 cut(s)	99
Csp6I	GTAC	3 cut(s)	250, 347, 619
CspAI	ACCGGT	1 cut(s)	291
CspCI	CAANNNNNGTGG	2 cut(s)	1077, 1112
CviAII	CATG	2 cut(s)	484, 1115
CviQI	GTAC	3 cut(s)	250, 347, 619
DdeI	CTNAG	2 cut(s)	94, 130
DpnI	GATC	4 cut(s)	354, 360, 606, 790
DpnII	GATC	4 cut(s)	352, 358, 604, 788
EaeI	YGGCCR	2 cut(s)	211, 591
Eam1104I	CTCTTC	3 cut(s)	467, 833, 1227
EarI	CTCTTC	3 cut(s)	467, 833, 1227
Ecl136II	GAGCTC	1 cut(s)	866
Eco24I	GRGCYC	2 cut(s)	425, 868
Eco32I	GATATC	2 cut(s)	639, 776
Eco47I	GGWCC	1 cut(s)	1180
Eco53kI	GAGCTC	1 cut(s)	866
Eco57I	CTGAAG	2 cut(s)	448, 879
Eco91I	GGTNACC	1 cut(s)	566
EcoICRI	GAGCTC	1 cut(s)	866
EcoO109I	RGGNCCY	1 cut(s)	501
EcoO65I	GGTNACC	1 cut(s)	566
EcoRI	GAATTC	1 cut(s)	897
EcoRII	CCWGG	2 cut(s)	178, 1032
EcoRV	GATATC	2 cut(s)	639, 776
EcoT22I	ATGCAT	1 cut(s)	583
EcoT38I	GRGCYC	2 cut(s)	425, 868
FaeI	CATG	2 cut(s)	487, 1118
FalI	AAGNNNNNCTT	6 cut(s)	852, 884, 896, 928, 918, 950
FatI	CATG	2 cut(s)	483, 1114
FauI	CCCGC	1 cut(s)	1126
FauNDI	CATATG	2 cut(s)	393, 1082
FbaI	TGATCA	1 cut(s)	358
FblI	GTMKAC	1 cut(s)	557
Fnu4HI	GCNGC	4 cut(s)	17, 368, 457, 1070
FokI	GGATG	3 cut(s)	162, 731, 1170
FriOI	GRGCYC	2 cut(s)	425, 868
Fsp4HI	GCNGC	4 cut(s)	17, 368, 457, 1070
FspAI	RTGCGCAY	1 cut(s)	482
FspBI	CTAG	3 cut(s)	470, 677, 792
FspI	TGCGCA	1 cut(s)	482
GlaI	GCGC	1 cut(s)	482
GluI	GCNGC	4 cut(s)	17, 368, 457, 1070
GsaI	CCCAGC	3 cut(s)	385, 1076, 1156
HaeIII	GGCC	3 cut(s)	213, 502, 593
HapII	CCGG	2 cut(s)	292, 1229
HgaI	GACGC	1 cut(s)	99
HhaI	GCGC	1 cut(s)	483
Hin1II	CATG	2 cut(s)	487, 1118
Hin6I	GCGC	1 cut(s)	481
HinP1I	GCGC	1 cut(s)	481
HincII	GTYRAC	1 cut(s)	114
HindII	GTYRAC	1 cut(s)	114
HindIII	AAGCTT	1 cut(s)	91
HinfI	GANTC	6 cut(s)	82, 126, 388, 431, 821, 1100
HpaII	CCGG	2 cut(s)	292, 1229
HphI	GGTGA	3 cut(s)	578, 638, 1040
Hpy166II	GTNNAC	3 cut(s)	114, 173, 558
Hpy188I	TCNGA	5 cut(s)	133, 145, 467, 832, 963
Hpy188III	TCNNGA	5 cut(s)	86, 356, 677, 763, 881
Hpy8I	GTNNAC	3 cut(s)	114, 173, 558
HpyAV	CCTTC	7 cut(s)	514, 517, 854, 896, 920, 982, 1032
HpyCH4III	ACNGT	2 cut(s)	106, 970
HpyCH4V	TGCA	6 cut(s)	155, 173, 581, 872, 996, 1124
HpyF10VI	GCNNNNNNNGC	2 cut(s)	651, 1130
HpyF3I	CTNAG	2 cut(s)	94, 130
Hsp92II	CATG	2 cut(s)	487, 1118
HspAI	GCGC	1 cut(s)	481
Ksp22I	TGATCA	1 cut(s)	358
Kzo9I	GATC	4 cut(s)	352, 358, 604, 788
LmnI	GCTCC	2 cut(s)	863, 1076
Lsp1109I	GCAGC	4 cut(s)	28, 354, 468, 1081
LweI	GCATC	1 cut(s)	1120
MaeI	CTAG	3 cut(s)	470, 677, 792
MaeIII	GTNAC	5 cut(s)	238, 294, 566, 1108, 1246
MalI	GATC	4 cut(s)	354, 360, 606, 790
MboI	GATC	4 cut(s)	352, 358, 604, 788
MboII	GAAGA	6 cut(s)	146, 419, 454, 850, 1069, 1244
MfeI	CAATTG	1 cut(s)	814
MflI	RGATCY	1 cut(s)	788
MhlI	GDGCHC	4 cut(s)	175, 425, 802, 868
MlsI	TGGCCA	2 cut(s)	213, 593
MluCI	AATT	7 cut(s)	373, 803, 814, 897, 920, 1017, 1207
MluNI	TGGCCA	2 cut(s)	213, 593
MlyI	GAGTC	2 cut(s)	120, 830
MnlI	CCTC	8 cut(s)	91, 154, 210, 397, 470, 945, 1087, 1197
Mox20I	TGGCCA	2 cut(s)	213, 593
Mph1103I	ATGCAT	1 cut(s)	583
MscI	TGGCCA	2 cut(s)	213, 593
MseI	TTAA	6 cut(s)	266, 273, 312, 497, 510, 891
Msp20I	TGGCCA	2 cut(s)	213, 593
MspA1I	CMGCKG	3 cut(s)	19, 385, 1072
MspCI	CTTAAG	1 cut(s)	890
MspI	CCGG	2 cut(s)	292, 1229
MspR9I	CCNGG	2 cut(s)	180, 1034
MunI	CAATTG	1 cut(s)	814
Mva1269I	GAATGC	1 cut(s)	736
MvaI	CCWGG	2 cut(s)	180, 1034
MvnI	CGCG	1 cut(s)	645
MwoI	GCNNNNNNNGC	2 cut(s)	651, 1130
NdeI	CATATG	2 cut(s)	393, 1082
NdeII	GATC	4 cut(s)	352, 358, 604, 788
NlaIII	CATG	2 cut(s)	487, 1118
NlaIV	GGNNCC	2 cut(s)	655, 1078
NmuCI	GTSAC	4 cut(s)	238, 566, 1108, 1246
NsbI	TGCGCA	1 cut(s)	482
NsiI	ATGCAT	1 cut(s)	583
PaqCI	CACCTGC	1 cut(s)	44
PctI	GAATGC	1 cut(s)	736
PfeI	GAWTC	4 cut(s)	82, 388, 431, 1100
PinAI	ACCGGT	1 cut(s)	291
PkrI	GCNGC	4 cut(s)	18, 369, 458, 1071
PleI	GAGTC	2 cut(s)	120, 829
PpsI	GAGTC	2 cut(s)	120, 829
Psp124BI	GAGCTC	1 cut(s)	868
Psp6I	CCWGG	2 cut(s)	178, 1032
PspEI	GGTNACC	1 cut(s)	566
PspFI	CCCAGC	3 cut(s)	381, 1072, 1152
PspGI	CCWGG	2 cut(s)	178, 1032
PspN4I	GGNNCC	2 cut(s)	655, 1078
PspPI	GGNCC	2 cut(s)	501, 1180
PstNI	CAGNNNCTG	1 cut(s)	961
PsuI	RGATCY	1 cut(s)	788
PvuII	CAGCTG	3 cut(s)	19, 385, 1072
RsaI	GTAC	3 cut(s)	251, 348, 620
RsaNI	GTAC	3 cut(s)	250, 347, 619
SacI	GAGCTC	1 cut(s)	868
SaqAI	TTAA	6 cut(s)	266, 273, 312, 497, 510, 891
SatI	GCNGC	4 cut(s)	17, 368, 457, 1070
Sau3AI	GATC	4 cut(s)	352, 358, 604, 788
Sau96I	GGNCC	2 cut(s)	501, 1180
ScaI	AGTACT	1 cut(s)	620
SchI	GAGTC	2 cut(s)	120, 830
ScrFI	CCNGG	2 cut(s)	180, 1034
SduI	GDGCHC	4 cut(s)	175, 425, 802, 868
SfaNI	GCATC	1 cut(s)	1120
SinI	GGWCC	1 cut(s)	1180
SmlI	CTYRAG	1 cut(s)	890
SmoI	CTYRAG	1 cut(s)	890
Sse9I	AATT	7 cut(s)	373, 803, 814, 897, 920, 1017, 1207
SsiI	CCGC	1 cut(s)	1133
SspI	AATATT	2 cut(s)	413, 540
SspMI	CTAG	3 cut(s)	470, 677, 792
SstI	GAGCTC	1 cut(s)	868
StyD4I	CCNGG	2 cut(s)	178, 1032
TaaI	ACNGT	2 cut(s)	106, 970
TaqI	TCGA	2 cut(s)	288, 1262
TaqII	GACCGA	1 cut(s)	585
TasI	AATT	7 cut(s)	373, 803, 814, 897, 920, 1017, 1207
TatI	WGTACW	1 cut(s)	618
TfiI	GAWTC	4 cut(s)	82, 388, 431, 1100
Tru1I	TTAA	6 cut(s)	266, 273, 312, 497, 510, 891
Tru9I	TTAA	6 cut(s)	266, 273, 312, 497, 510, 891
TscAI	CASTG	7 cut(s)	39, 310, 538, 1113, 1164, 1209, 1255
TseFI	GTSAC	4 cut(s)	238, 566, 1108, 1246
TseI	GCWGC	4 cut(s)	16, 367, 456, 1069
Tsp45I	GTSAC	4 cut(s)	238, 566, 1108, 1246
TspDTI	ATGAA	6 cut(s)	17, 174, 297, 496, 933, 1092
TspRI	CASTG	7 cut(s)	39, 310, 538, 1113, 1164, 1209, 1255
Vha464I	CTTAAG	1 cut(s)	890
VneI	GTGCAC	1 cut(s)	171
VpaK11BI	GGWCC	1 cut(s)	1180
XapI	RAATTY	2 cut(s)	373, 897
XbaI	TCTAGA	1 cut(s)	676
XmiI	GTMKAC	1 cut(s)	557
XspI	CTAG	3 cut(s)	470, 677, 792
ZrmI	AGTACT	1 cut(s)	620
Zsp2I	ATGCAT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.