Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Forward (+)

7832560 .. 7834360

Gene Structure 1801 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36518

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1245 bp

ATGATGAGTGTGGCTACTGTCTCTCCCATTTTGCATAACATTGATAACCTTGTTGGGTATCTTAAGAGGGGACGAGGGTTAGATTCTGATTACAGTGACCTAGGATTGATAGATCAGAGGGCAAAGAGGCTTAAGGTAGAGACTGATGTGGGAATTTCAGGAGAGGCAAGTTTTGCTTTTGATGAAAAACCCAGGTTCTCTGAAGTGAGATTTGGGTATATACCCAAGGGGTTAGTGCTTAGGGATGTTGAGATTGATCGATTACGCAATGAAAACACTAGGAATCTATTGTTGAACCATAAGAAACTTCATCTGGTTCTTGATCTAGACCACACCCTGCTGAATACCACTTTCCTTGATGAGATGTCACCCGAAGAAGAATATCTGAAGACCCAAACCCAGTCTGATCATTCTCTGCAGTATGTTCACGTTGTTGACACTCCCAGTAGGCAATTGATGACCAAGTTGAGGCCTTATATTAGGACGTTTTTAGTGCAAGCCAGTCAAATGTTTGAGCTGTCCATATACACAATGGGTAATCGAGATTATGCGCTAGAAATGGCTAAGCTGCTTGATCCCGGAAATCATATCTTTGGTGGTAGAGTCATATCGCGTGATGATAGCACAGAAACAGAGAGAAAGAGTCTAGATGTCCTGCTTGCGCAAGATTCTGCTGTTGTGATCCTTGATGATACAAAAAATGTATGGACAAATGACAACAGGGACAATGTAATAGTGATGCCTAGATACCATTTCTTTAGAACTAGTTGTCAAAAGTTTGGCCTCAGTAAGGGCAAGCCGTATTCTGAGTTGAAGACTGATGAATGTGACCGGTATGGAGGAGCTTACCTTGCAAATGTACTTCAACTTCTTGGGAATATCCACACCATATTCTTTAATGAAGTTGAGTTACAGGGGTGGGATCTTATCGACAGAGATGTTAGGCTCGTCTTGAAAATCCTTAGGAAGGAAGTCTTGAAGGGCTGTAAAATTGTTTTCAGCCATGTATTCCCCTCAAATGTCGAAGCTAATACTCATCCTTTGTGGAAGATGGCGGAGCAGCTGGGCGCTACTTGTTCAACACAAGTCGATCCATCAGTCACACATGTAGTTGCAGCAAATGCTCGTACACAGAAATCGTTCTGGGCAGTTAAAGAAGGAAAGTTTTTGGTGAATCCCCAATGGATTCATACTGCAAATTTTATGTGGCAAAAGCAACCTGAAGATAATTTTCCCTGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

414

Amino Acids

47.52

Weight (kDa)

6.4

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	104 - 251	1.6e-24	NLI interacting factor-like phosphatase
BRCT	PF00533	324 - 396	3.1e-09	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	345 - 395	1.2e-06	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	663
AccII	CGCG	1 cut(s)	613
AciI	CCGC	1 cut(s)	1055
AclWI	GGATC	4 cut(s)	569, 676, 930, 1085
AcsI	RAATTY	2 cut(s)	153, 1198
AcuI	CTGAAG	3 cut(s)	222, 407, 1242
AfaI	GTAC	2 cut(s)	861, 1129
AfiI	CCNNNNNNNGG	3 cut(s)	468, 790, 967
AflII	CTTAAG	2 cut(s)	62, 131
AflIII	ACRYGT	1 cut(s)	1105
AgeI	ACCGGT	1 cut(s)	831
AgsI	TTSAA	6 cut(s)	295, 814, 866, 955, 979, 1080
AhlI	ACTAGT	1 cut(s)	764
AjnI	CCWGG	1 cut(s)	191
AjuI	GAANNNNNNNTTGG	2 cut(s)	195, 227
AluBI	AGCT	5 cut(s)	517, 568, 845, 1028, 1063
AluI	AGCT	5 cut(s)	517, 568, 845, 1028, 1063
Alw26I	GTCTC	2 cut(s)	25, 134
AlwI	GGATC	4 cut(s)	569, 676, 930, 1085
AoxI	GGCC	2 cut(s)	470, 781
ApeKI	GCWGC	3 cut(s)	568, 1060, 1115
ApoI	RAATTY	2 cut(s)	153, 1198
AsiGI	ACCGGT	1 cut(s)	831
Asp700I	GAANNNNTTC	1 cut(s)	1139
AspA2I	CCTAGG	1 cut(s)	100
AspLEI	GCGC	3 cut(s)	553, 664, 1070
AsuC2I	CCSGG	1 cut(s)	579
AsuHPI	GGTGA	2 cut(s)	360, 1183
AvrII	CCTAGG	1 cut(s)	100
AxyI	CCTNAGG	1 cut(s)	962
BarI	GAAGNNNNNNTAC	4 cut(s)	852, 884, 894, 926
BbsI	GAAGAC	2 cut(s)	395, 821
BbvI	GCAGC	3 cut(s)	555, 1072, 1127
BccI	CCATC	2 cut(s)	1045, 1102
BceAI	ACGGC	1 cut(s)	784
BciT130I	CCWGG	1 cut(s)	193
BclI	TGATCA	1 cut(s)	406
BcnI	CCSGG	1 cut(s)	579
BcoDI	GTCTC	2 cut(s)	25, 134
BcuI	ACTAGT	1 cut(s)	764
BfaI	CTAG	7 cut(s)	101, 279, 326, 554, 647, 744, 765
BfmI	CTRYAG	1 cut(s)	416
BfoI	RGCGCY	1 cut(s)	1071
BfrI	CTTAAG	2 cut(s)	62, 131
BisI	GCNGC	3 cut(s)	569, 1061, 1116
BlnI	CCTAGG	1 cut(s)	100
BlpI	GCTNAGC	1 cut(s)	564
BlsI	GCNGC	3 cut(s)	570, 1062, 1117
Bme1390I	CCNGG	2 cut(s)	193, 579
BmrFI	CCNGG	2 cut(s)	193, 579
BmrI	ACTGGG	2 cut(s)	394, 438
BmsI	GCATC	1 cut(s)	729
BmuI	ACTGGG	2 cut(s)	394, 438
BpiI	GAAGAC	2 cut(s)	395, 821
Bpu10I	CCTNAGC	1 cut(s)	239
Bpu1102I	GCTNAGC	1 cut(s)	564
BpuMI	CCSGG	1 cut(s)	579
Bsa29I	ATCGAT	1 cut(s)	259
BsaJI	CCNNGG	3 cut(s)	100, 191, 225
BsaWI	WCCGGW	1 cut(s)	831
BsaXI	ACNNNNNCTCC	2 cut(s)	7, 37
Bsc4I	CCNNNNNNNGG	3 cut(s)	468, 790, 967
Bse118I	RCCGGY	1 cut(s)	831
Bse1I	ACTGG	3 cut(s)	400, 444, 501
Bse21I	CCTNAGG	1 cut(s)	962
Bse3DI	GCAATG	1 cut(s)	274
BseBI	CCWGG	1 cut(s)	193
BseCI	ATCGAT	1 cut(s)	259
BseDI	CCNNGG	3 cut(s)	100, 191, 225
BseGI	GGATG	2 cut(s)	250, 1036
BseLI	CCNNNNNNNGG	3 cut(s)	468, 790, 967
BseMI	GCAATG	1 cut(s)	274
BseMII	CTCAG	2 cut(s)	798, 799
BseNI	ACTGG	3 cut(s)	400, 444, 501
BseRI	GAGGAG	1 cut(s)	855
BseXI	GCAGC	3 cut(s)	555, 1072, 1127
BseYI	CCCAGC	1 cut(s)	1063
Bsh1236I	CGCG	1 cut(s)	613
BshFI	GGCC	2 cut(s)	472, 783
BshTI	ACCGGT	1 cut(s)	831
BshVI	ATCGAT	1 cut(s)	259
BsiSI	CCGG	2 cut(s)	579, 832
BslFI	GGGAC	2 cut(s)	84, 737
BslI	CCNNNNNNNGG	3 cut(s)	468, 790, 967
BsmAI	GTCTC	2 cut(s)	25, 134
BsmFI	GGGAC	2 cut(s)	84, 737
BsnI	GGCC	2 cut(s)	472, 783
Bsp143I	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
Bsp1720I	GCTNAGC	1 cut(s)	564
BspACI	CCGC	1 cut(s)	1055
BspANI	GGCC	2 cut(s)	472, 783
BspCNI	CTCAG	2 cut(s)	798, 799
BspDI	ATCGAT	1 cut(s)	259
BspFNI	CGCG	1 cut(s)	613
BspMAI	CTGCAG	1 cut(s)	420
BspPI	GGATC	4 cut(s)	569, 676, 930, 1085
BspTI	CTTAAG	2 cut(s)	62, 131
BsrDI	GCAATG	1 cut(s)	274
BsrFI	RCCGGY	1 cut(s)	831
BsrI	ACTGG	3 cut(s)	400, 444, 501
BssAI	RCCGGY	1 cut(s)	831
BssECI	CCNNGG	3 cut(s)	100, 191, 225
BssMI	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
BssT1I	CCWWGG	2 cut(s)	100, 225
Bst2UI	CCWGG	1 cut(s)	193
Bst4CI	ACNGT	2 cut(s)	19, 95
BstAFI	CTTAAG	2 cut(s)	62, 131
BstAPI	GCANNNNNTGC	2 cut(s)	173, 1121
BstC8I	GCNNGC	3 cut(s)	498, 660, 797
BstDEI	CTNAG	5 cut(s)	239, 564, 785, 807, 962
BstENI	CCTNNNNNAGG	2 cut(s)	788, 965
BstF5I	GGATG	2 cut(s)	250, 1036
BstFNI	CGCG	1 cut(s)	613
BstH2I	RGCGCY	1 cut(s)	1071
BstHHI	GCGC	3 cut(s)	553, 664, 1070
BstKTI	GATC	8 cut(s)	115, 259, 325, 409, 577, 684, 925, 1093
BstMAI	GTCTC	2 cut(s)	25, 134
BstMBI	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
BstMWI	GCNNNNNNNGC	3 cut(s)	173, 851, 1121
BstNI	CCWGG	1 cut(s)	193
BstNSI	RCATGY	1 cut(s)	1109
BstSCI	CCNGG	2 cut(s)	191, 577
BstSFI	CTRYAG	1 cut(s)	416
BstUI	CGCG	1 cut(s)	613
BstV1I	GCAGC	3 cut(s)	555, 1072, 1127
BstV2I	GAAGAC	2 cut(s)	395, 821
BstX2I	RGATCY	1 cut(s)	922
BstYI	RGATCY	1 cut(s)	922
Bsu15I	ATCGAT	1 cut(s)	259
Bsu36I	CCTNAGG	1 cut(s)	962
BsuRI	GGCC	2 cut(s)	472, 783
BsuTUI	ATCGAT	1 cut(s)	259
BtsCI	GGATG	2 cut(s)	250, 1036
BtsIMutI	CAGTG	1 cut(s)	100
Cac8I	GCNNGC	3 cut(s)	498, 660, 797
CfoI	GCGC	3 cut(s)	553, 664, 1070
Cfr10I	RCCGGY	1 cut(s)	831
ClaI	ATCGAT	1 cut(s)	259
Csp6I	GTAC	2 cut(s)	860, 1128
CspAI	ACCGGT	1 cut(s)	831
CspCI	CAANNNNNGTGG	2 cut(s)	337, 372
CviAII	CATG	2 cut(s)	1004, 1106
CviQI	GTAC	2 cut(s)	860, 1128
DdeI	CTNAG	5 cut(s)	239, 564, 785, 807, 962
DpnI	GATC	8 cut(s)	114, 258, 324, 408, 576, 683, 924, 1092
DpnII	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
EciI	GGCGGA	1 cut(s)	1070
Eco130I	CCWWGG	2 cut(s)	100, 225
Eco147I	AGGCCT	1 cut(s)	472
Eco57I	CTGAAG	3 cut(s)	222, 407, 1242
Eco81I	CCTNAGG	1 cut(s)	962
EcoNI	CCTNNNNNAGG	2 cut(s)	788, 965
EcoRII	CCWGG	1 cut(s)	191
EcoT14I	CCWWGG	2 cut(s)	100, 225
ErhI	CCWWGG	2 cut(s)	100, 225
FaeI	CATG	2 cut(s)	1007, 1109
FalI	AAGNNNNNCTT	4 cut(s)	160, 192, 959, 991
FaqI	GGGAC	2 cut(s)	84, 737
FatI	CATG	2 cut(s)	1003, 1105
FbaI	TGATCA	1 cut(s)	406
Fnu4HI	GCNGC	3 cut(s)	569, 1061, 1116
FokI	GGATG	2 cut(s)	257, 1023
Fsp4HI	GCNGC	3 cut(s)	569, 1061, 1116
FspBI	CTAG	7 cut(s)	101, 279, 326, 554, 647, 744, 765
FspI	TGCGCA	1 cut(s)	663
GlaI	GCGC	3 cut(s)	552, 663, 1069
GluI	GCNGC	3 cut(s)	569, 1061, 1116
GsaI	CCCAGC	1 cut(s)	1067
HaeII	RGCGCY	1 cut(s)	1071
HaeIII	GGCC	2 cut(s)	472, 783
HapII	CCGG	2 cut(s)	579, 832
HhaI	GCGC	3 cut(s)	553, 664, 1070
Hin1II	CATG	2 cut(s)	1007, 1109
Hin6I	GCGC	3 cut(s)	551, 662, 1068
HinP1I	GCGC	3 cut(s)	551, 662, 1068
HincII	GTYRAC	1 cut(s)	436
HindII	GTYRAC	1 cut(s)	436
HinfI	GANTC	7 cut(s)	83, 283, 603, 643, 668, 1174, 1186
HpaII	CCGG	2 cut(s)	579, 832
HphI	GGTGA	2 cut(s)	360, 1183
Hpy166II	GTNNAC	3 cut(s)	427, 436, 1130
Hpy188I	TCNGA	6 cut(s)	88, 117, 202, 387, 406, 808
Hpy188III	TCNNGA	7 cut(s)	159, 320, 326, 542, 647, 952, 976
Hpy8I	GTNNAC	3 cut(s)	427, 436, 1130
HpyAV	CCTTC	3 cut(s)	961, 973, 1151
HpyCH4III	ACNGT	2 cut(s)	19, 95
HpyCH4IV	ACGT	2 cut(s)	429, 485
HpyCH4V	TGCA	6 cut(s)	34, 418, 496, 854, 1115, 1196
HpyF10VI	GCNNNNNNNGC	3 cut(s)	173, 851, 1121
HpyF3I	CTNAG	5 cut(s)	239, 564, 785, 807, 962
HpySE526I	ACGT	2 cut(s)	429, 485
Hsp92II	CATG	2 cut(s)	1007, 1109
HspAI	GCGC	3 cut(s)	551, 662, 1068
Ksp22I	TGATCA	1 cut(s)	406
Kzo9I	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
LmnI	GCTCC	2 cut(s)	842, 1057
Lsp1109I	GCAGC	3 cut(s)	555, 1072, 1127
LweI	GCATC	1 cut(s)	729
MaeI	CTAG	7 cut(s)	101, 279, 326, 554, 647, 744, 765
MaeII	ACGT	2 cut(s)	429, 485
MaeIII	GTNAC	5 cut(s)	95, 366, 827, 909, 1099
MalI	GATC	8 cut(s)	114, 258, 324, 408, 576, 683, 924, 1092
MboI	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
MboII	GAAGA	6 cut(s)	386, 389, 400, 826, 1060, 1235
MfeI	CAATTG	1 cut(s)	452
MflI	RGATCY	1 cut(s)	922
MluCI	AATT	5 cut(s)	153, 452, 990, 1198, 1228
MlyI	GAGTC	2 cut(s)	612, 652
MnlI	CCTC	9 cut(s)	60, 68, 111, 120, 157, 462, 794, 833, 1024
MroXI	GAANNNNTTC	1 cut(s)	1139
MseI	TTAA	4 cut(s)	63, 132, 897, 1152
MspA1I	CMGCKG	1 cut(s)	1063
MspCI	CTTAAG	2 cut(s)	62, 131
MspI	CCGG	2 cut(s)	579, 832
MspR9I	CCNGG	2 cut(s)	193, 579
MunI	CAATTG	1 cut(s)	452
MvaI	CCWGG	1 cut(s)	193
MvnI	CGCG	1 cut(s)	613
MwoI	GCNNNNNNNGC	3 cut(s)	173, 851, 1121
NciI	CCSGG	1 cut(s)	579
NdeII	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
NlaIII	CATG	2 cut(s)	1007, 1109
NmuCI	GTSAC	4 cut(s)	95, 366, 827, 1099
NsbI	TGCGCA	1 cut(s)	663
NspI	RCATGY	1 cut(s)	1109
PceI	AGGCCT	1 cut(s)	472
PciI	ACATGT	1 cut(s)	1105
PdmI	GAANNNNTTC	1 cut(s)	1139
PfeI	GAWTC	5 cut(s)	83, 283, 668, 1174, 1186
PfoI	TCCNGGA	1 cut(s)	577
PinAI	ACCGGT	1 cut(s)	831
PkrI	GCNGC	3 cut(s)	570, 1062, 1117
PleI	GAGTC	2 cut(s)	611, 651
PpsI	GAGTC	2 cut(s)	611, 651
PscI	ACATGT	1 cut(s)	1105
Psp6I	CCWGG	1 cut(s)	191
PspFI	CCCAGC	1 cut(s)	1063
PspGI	CCWGG	1 cut(s)	191
PstI	CTGCAG	1 cut(s)	420
PsuI	RGATCY	1 cut(s)	922
PvuII	CAGCTG	1 cut(s)	1063
RsaI	GTAC	2 cut(s)	861, 1129
RsaNI	GTAC	2 cut(s)	860, 1128
SaqAI	TTAA	4 cut(s)	63, 132, 897, 1152
SatI	GCNGC	3 cut(s)	569, 1061, 1116
Sau3AI	GATC	8 cut(s)	112, 256, 322, 406, 574, 681, 922, 1090
SchI	GAGTC	2 cut(s)	612, 652
ScrFI	CCNGG	2 cut(s)	193, 579
SfaNI	GCATC	1 cut(s)	729
SfcI	CTRYAG	1 cut(s)	416
SmlI	CTYRAG	2 cut(s)	62, 131
SmoI	CTYRAG	2 cut(s)	62, 131
SpeI	ACTAGT	1 cut(s)	764
Sse9I	AATT	5 cut(s)	153, 452, 990, 1198, 1228
SseBI	AGGCCT	1 cut(s)	472
SsiI	CCGC	1 cut(s)	1055
SspMI	CTAG	7 cut(s)	101, 279, 326, 554, 647, 744, 765
StuI	AGGCCT	1 cut(s)	472
StyD4I	CCNGG	2 cut(s)	191, 577
StyI	CCWWGG	2 cut(s)	100, 225
TaaI	ACNGT	2 cut(s)	19, 95
TaiI	ACGT	2 cut(s)	432, 488
TaqI	TCGA	5 cut(s)	259, 541, 930, 1023, 1089
TasI	AATT	5 cut(s)	153, 452, 990, 1198, 1228
TatI	WGTACW	1 cut(s)	859
TfiI	GAWTC	5 cut(s)	83, 283, 668, 1174, 1186
Tru1I	TTAA	4 cut(s)	63, 132, 897, 1152
Tru9I	TTAA	4 cut(s)	63, 132, 897, 1152
TscAI	CASTG	1 cut(s)	100
TseFI	GTSAC	4 cut(s)	95, 366, 827, 1099
TseI	GCWGC	3 cut(s)	568, 1060, 1115
Tsp45I	GTSAC	4 cut(s)	95, 366, 827, 1099
TspDTI	ATGAA	6 cut(s)	198, 285, 299, 837, 915, 1178
TspRI	CASTG	1 cut(s)	100
Vha464I	CTTAAG	2 cut(s)	62, 131
XagI	CCTNNNNNAGG	2 cut(s)	788, 965
XapI	RAATTY	2 cut(s)	153, 1198
XbaI	TCTAGA	2 cut(s)	325, 646
XceI	RCATGY	1 cut(s)	1109
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XmaJI	CCTAGG	1 cut(s)	100
XmnI	GAANNNNTTC	1 cut(s)	1139
XspI	CTAG	7 cut(s)	101, 279, 326, 554, 647, 744, 765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.