Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Reverse (-)

12039253 .. 12041876

Gene Structure 2624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001210

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGTATTCAGCCTGGTGTGGGTACATACACAAGGGCTTGAGACTTAATAATGATGAAATCGACCGGTTACGCAACACAGACATTAAGAAATCGCTAAATAATAAGAAACTTTATTTGGTACTGGATCTTGATCATACACTGCTAAATTCCACCCAGCTGAATCATATGACGGCAGAAGAAGAATATTTGATGAGCCCACCAGATTCGCTGCCAGATGAGTTGAAAGGCAGCCTTTTCAGACTGGACTTTATGCATATGATGACCAAGTCAAGGCCCTTCATTAGGACATTTTTGAAGAAAGCCAGTGAAATGTTTGAAATGTACATGTACACTATGGGTGATCGAGCCTATGCATTGGAAAGGGCCAAGTTGCTTGATCCCAAAAAAGAGTACTTTGGTGATAGGGTGATATCACCTGATGATGGTACCCAAAAACATCAAAAGGGTCTAGATATTGTGGTTGGGCATGAAAGTGCTGTTCTGATACTGGATGATACAGAAAATGCATGGATAAAGCACAAGGACAATCTAATTTTGATGGAAAGATATCATTTCTTTAGATCTAGTTGTGCCCAATTTGGGTTCACTTGTGAGTCTCTTTCAGAGTTGAAGAGTGATGAGAGTGAGCCTGAAGGCGCTCTTGCAAATGTTCTTGACCTTCTTAAGCGAATCCACAAAATTTTCTTCTATGAATTGGGAGGCAATCTTATATATAGAGACGTAAGGCAGGTTCTGAAAACTGTTAGGAAGGAAGTCTTGAAGGGGTGCAAAGTTGTTTTCAGCCGTTTAATTCCTTCAAAAGTCCAGGCTGATAATCATCACCTGTGGAAGATGGCAGAGCAGCTGGGAGCCATATGTTCAACCAAAGTGGATTCACCAGTGACCCATGTAGTTGCATTAAATGCAGGAACAGAAAAGTCTCGCTGGGCAGTAAATCAAAACAAGTTTTTGGTCCATCCTTTGTGGCTTGCAGCAGCAAATTATATGTGGCGAAAGCAACCTGAAGACAAGTTTCCTGTCACTGAAATGAAATCGAAAACCCAAAGCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

351

Amino Acids

40.58

Weight (kDa)

8.59

Isoelectric Point (pI)

45.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	38 - 184	2.1e-24	NLI interacting factor-like phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	718
Acc65I	GGTACC	1 cut(s)	425
AccB1I	GGYRCC	1 cut(s)	425
AclWI	GGATC	2 cut(s)	132, 371
AcsI	RAATTY	2 cut(s)	145, 678
AcuI	CTGAAG	2 cut(s)	651, 1023
AfaI	GTAC	6 cut(s)	23, 120, 323, 329, 392, 427
AfiI	CCNNNNNNNGG	5 cut(s)	18, 270, 282, 422, 579
AflII	CTTAAG	1 cut(s)	662
AflIII	ACRYGT	1 cut(s)	324
AgeI	ACCGGT	1 cut(s)	63
AgsI	TTSAA	7 cut(s)	223, 295, 317, 610, 760, 798, 861
AjnI	CCWGG	2 cut(s)	11, 804
AjuI	GAANNNNNNNTTGG	2 cut(s)	98, 130
AluBI	AGCT	2 cut(s)	157, 844
AluI	AGCT	2 cut(s)	157, 844
Alw26I	GTCTC	4 cut(s)	34, 600, 711, 924
AlwI	GGATC	2 cut(s)	132, 371
AlwNI	CAGNNNCTG	1 cut(s)	733
AoxI	GGCC	2 cut(s)	272, 363
ApeKI	GCWGC	5 cut(s)	208, 228, 841, 971, 974
ApoI	RAATTY	2 cut(s)	145, 678
AsiGI	ACCGGT	1 cut(s)	63
Asp718I	GGTACC	1 cut(s)	425
AspLEI	GCGC	1 cut(s)	638
AspS9I	GGNCC	3 cut(s)	273, 363, 952
AsuHPI	GGTGA	6 cut(s)	350, 405, 410, 418, 812, 867
AvaII	GGWCC	1 cut(s)	952
BaeGI	GKGCMC	1 cut(s)	574
BanI	GGYRCC	1 cut(s)	425
BanII	GRGCYC	1 cut(s)	197
BbsI	GAAGAC	1 cut(s)	1011
BbvI	GCAGC	5 cut(s)	195, 240, 853, 983, 986
BccI	CCATC	4 cut(s)	416, 532, 826, 963
BceAI	ACGGC	2 cut(s)	186, 768
BciT130I	CCWGG	2 cut(s)	13, 806
BclI	TGATCA	1 cut(s)	130
BcoDI	GTCTC	4 cut(s)	34, 600, 711, 924
BfaI	CTAG	2 cut(s)	449, 564
BfoI	RGCGCY	1 cut(s)	639
BfrI	CTTAAG	1 cut(s)	662
BfuAI	ACCTGC	1 cut(s)	718
BglII	AGATCT	1 cut(s)	560
BisI	GCNGC	5 cut(s)	209, 229, 842, 972, 975
BlsI	GCNGC	5 cut(s)	210, 230, 843, 973, 976
BmcAI	AGTACT	1 cut(s)	392
Bme1390I	CCNGG	2 cut(s)	13, 806
Bme18I	GGWCC	1 cut(s)	952
BmgT120I	GGNCC	3 cut(s)	273, 363, 952
BmiI	GGNNCC	2 cut(s)	427, 850
BmrFI	CCNGG	2 cut(s)	13, 806
BpiI	GAAGAC	1 cut(s)	1011
BpuEI	CTTGAG	1 cut(s)	58
BsaBI	GATNNNNATC	2 cut(s)	129, 816
BsaWI	WCCGGW	1 cut(s)	63
Bsc4I	CCNNNNNNNGG	5 cut(s)	18, 270, 282, 422, 579
Bse118I	RCCGGY	1 cut(s)	63
Bse1I	ACTGG	6 cut(s)	126, 246, 303, 492, 878, 1048
Bse8I	GATNNNNATC	2 cut(s)	129, 816
BseBI	CCWGG	2 cut(s)	13, 806
BseGI	GGATG	2 cut(s)	496, 955
BseJI	GATNNNNATC	2 cut(s)	129, 816
BseLI	CCNNNNNNNGG	5 cut(s)	18, 270, 282, 422, 579
BseNI	ACTGG	6 cut(s)	126, 246, 303, 492, 878, 1048
BseSI	GKGCMC	1 cut(s)	574
BseXI	GCAGC	5 cut(s)	195, 240, 853, 983, 986
BseYI	CCCAGC	3 cut(s)	153, 844, 924
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	2 cut(s)	274, 365
BshNI	GGYRCC	1 cut(s)	425
BshTI	ACCGGT	1 cut(s)	63
BsiEI	CGRYCG	1 cut(s)	64
BsiSI	CCGG	1 cut(s)	64
BslI	CCNNNNNNNGG	5 cut(s)	18, 270, 282, 422, 579
BsmAI	GTCTC	4 cut(s)	34, 600, 711, 924
BsmBI	CGTCTC	1 cut(s)	711
BsnI	GGCC	2 cut(s)	274, 365
Bsp1286I	GDGCHC	2 cut(s)	197, 574
Bsp1407I	TGTACA	2 cut(s)	321, 327
Bsp143I	GATC	5 cut(s)	124, 130, 340, 376, 560
BspANI	GGCC	2 cut(s)	274, 365
BspLI	GGNNCC	2 cut(s)	427, 850
BspMI	ACCTGC	1 cut(s)	718
BspPI	GGATC	2 cut(s)	132, 371
BspT107I	GGYRCC	1 cut(s)	425
BspTI	CTTAAG	1 cut(s)	662
BsrFI	RCCGGY	1 cut(s)	63
BsrGI	TGTACA	2 cut(s)	321, 327
BsrI	ACTGG	6 cut(s)	126, 246, 303, 492, 878, 1048
BssAI	RCCGGY	1 cut(s)	63
BssMI	GATC	5 cut(s)	124, 130, 340, 376, 560
Bst2UI	CCWGG	2 cut(s)	13, 806
Bst4CI	ACNGT	1 cut(s)	742
Bst6I	CTCTTC	1 cut(s)	605
BstAFI	CTTAAG	1 cut(s)	662
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstAUI	TGTACA	2 cut(s)	321, 327
BstC8I	GCNNGC	1 cut(s)	969
BstENI	CCTNNNNNAGG	1 cut(s)	280
BstF5I	GGATG	2 cut(s)	496, 955
BstH2I	RGCGCY	1 cut(s)	639
BstHHI	GCGC	1 cut(s)	638
BstKTI	GATC	5 cut(s)	127, 133, 343, 379, 563
BstMAI	GTCTC	4 cut(s)	34, 600, 711, 924
BstMBI	GATC	5 cut(s)	124, 130, 340, 376, 560
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	1 cut(s)	902
BstNI	CCWGG	2 cut(s)	13, 806
BstNSI	RCATGY	1 cut(s)	328
BstSCI	CCNGG	2 cut(s)	11, 804
BstSLI	GKGCMC	1 cut(s)	574
BstV1I	GCAGC	5 cut(s)	195, 240, 853, 983, 986
BstV2I	GAAGAC	1 cut(s)	1011
BstX2I	RGATCY	2 cut(s)	124, 560
BstYI	RGATCY	2 cut(s)	124, 560
BsuRI	GGCC	2 cut(s)	274, 365
BtsCI	GGATG	2 cut(s)	496, 955
BtsI	GCAGTG	1 cut(s)	137
BtsIMutI	CAGTG	4 cut(s)	137, 310, 885, 1020
BveI	ACCTGC	1 cut(s)	718
Cac8I	GCNNGC	1 cut(s)	969
CaiI	CAGNNNCTG	1 cut(s)	733
CfoI	GCGC	1 cut(s)	638
Cfr10I	RCCGGY	1 cut(s)	63
Cfr13I	GGNCC	3 cut(s)	273, 363, 952
Csp6I	GTAC	6 cut(s)	22, 119, 322, 328, 391, 426
CspAI	ACCGGT	1 cut(s)	63
CspCI	CAANNNNNGTGG	2 cut(s)	849, 884
CviAII	CATG	4 cut(s)	325, 467, 507, 887
CviQI	GTAC	6 cut(s)	22, 119, 322, 328, 391, 426
DpnI	GATC	5 cut(s)	126, 132, 342, 378, 562
DpnII	GATC	5 cut(s)	124, 130, 340, 376, 560
Eam1104I	CTCTTC	1 cut(s)	605
EarI	CTCTTC	1 cut(s)	605
Eco24I	GRGCYC	1 cut(s)	197
Eco32I	GATATC	2 cut(s)	411, 548
Eco47I	GGWCC	1 cut(s)	952
Eco57I	CTGAAG	2 cut(s)	651, 1023
EcoNI	CCTNNNNNAGG	1 cut(s)	280
EcoO109I	RGGNCCY	1 cut(s)	273
EcoRII	CCWGG	2 cut(s)	11, 804
EcoRV	GATATC	2 cut(s)	411, 548
EcoT22I	ATGCAT	3 cut(s)	255, 355, 508
EcoT38I	GRGCYC	1 cut(s)	197
Esp3I	CGTCTC	1 cut(s)	711
FaeI	CATG	4 cut(s)	328, 470, 510, 890
FalI	AAGNNNNNCTT	6 cut(s)	216, 248, 624, 656, 740, 772
FatI	CATG	4 cut(s)	324, 466, 506, 886
FauNDI	CATATG	3 cut(s)	165, 255, 854
FbaI	TGATCA	1 cut(s)	130
Fnu4HI	GCNGC	5 cut(s)	209, 229, 842, 972, 975
FokI	GGATG	2 cut(s)	503, 942
FriOI	GRGCYC	1 cut(s)	197
Fsp4HI	GCNGC	5 cut(s)	209, 229, 842, 972, 975
FspBI	CTAG	2 cut(s)	449, 564
GlaI	GCGC	1 cut(s)	637
GluI	GCNGC	5 cut(s)	209, 229, 842, 972, 975
GsaI	CCCAGC	3 cut(s)	157, 848, 928
HaeII	RGCGCY	1 cut(s)	639
HaeIII	GGCC	2 cut(s)	274, 365
HapII	CCGG	1 cut(s)	64
HhaI	GCGC	1 cut(s)	638
Hin1II	CATG	4 cut(s)	328, 470, 510, 890
Hin6I	GCGC	1 cut(s)	636
HinP1I	GCGC	1 cut(s)	636
HinfI	GANTC	5 cut(s)	160, 203, 593, 669, 872
HpaII	CCGG	1 cut(s)	64
HphI	GGTGA	6 cut(s)	350, 405, 410, 418, 812, 867
Hpy166II	GTNNAC	2 cut(s)	330, 585
Hpy188I	TCNGA	4 cut(s)	239, 483, 604, 735
Hpy188III	TCNNGA	4 cut(s)	128, 449, 653, 757
Hpy8I	GTNNAC	2 cut(s)	330, 585
HpyAV	CCTTC	6 cut(s)	286, 626, 668, 742, 754, 804
HpyCH4III	ACNGT	1 cut(s)	742
HpyCH4IV	ACGT	1 cut(s)	720
HpyCH4V	TGCA	8 cut(s)	253, 353, 506, 644, 768, 896, 905, 971
HpyF10VI	GCNNNNNNNGC	1 cut(s)	902
HpySE526I	ACGT	1 cut(s)	720
Hsp92II	CATG	4 cut(s)	328, 470, 510, 890
HspAI	GCGC	1 cut(s)	636
KpnI	GGTACC	1 cut(s)	429
Ksp22I	TGATCA	1 cut(s)	130
Kzo9I	GATC	5 cut(s)	124, 130, 340, 376, 560
LmnI	GCTCC	1 cut(s)	848
Lsp1109I	GCAGC	5 cut(s)	195, 240, 853, 983, 986
MaeI	CTAG	2 cut(s)	449, 564
MaeII	ACGT	1 cut(s)	720
MaeIII	GTNAC	3 cut(s)	66, 880, 1018
MalI	GATC	5 cut(s)	126, 132, 342, 378, 562
MboI	GATC	5 cut(s)	124, 130, 340, 376, 560
MboII	GAAGA	7 cut(s)	188, 191, 307, 622, 676, 841, 1016
MflI	RGATCY	2 cut(s)	124, 560
MhlI	GDGCHC	2 cut(s)	197, 574
MluCI	AATT	7 cut(s)	145, 531, 575, 678, 692, 789, 979
MlyI	GAGTC	1 cut(s)	602
MnlI	CCTC	1 cut(s)	692
Mph1103I	ATGCAT	3 cut(s)	255, 355, 508
MseI	TTAA	5 cut(s)	45, 84, 663, 788, 899
MslI	CAYNNNNRTG	2 cut(s)	471, 1025
MspA1I	CMGCKG	2 cut(s)	157, 844
MspCI	CTTAAG	1 cut(s)	662
MspI	CCGG	1 cut(s)	64
MspR9I	CCNGG	2 cut(s)	13, 806
MvaI	CCWGG	2 cut(s)	13, 806
MwoI	GCNNNNNNNGC	1 cut(s)	902
NdeI	CATATG	3 cut(s)	165, 255, 854
NdeII	GATC	5 cut(s)	124, 130, 340, 376, 560
NlaIII	CATG	4 cut(s)	328, 470, 510, 890
NlaIV	GGNNCC	2 cut(s)	427, 850
NmuCI	GTSAC	2 cut(s)	880, 1018
NsiI	ATGCAT	3 cut(s)	255, 355, 508
NspI	RCATGY	1 cut(s)	328
PciI	ACATGT	1 cut(s)	324
PfeI	GAWTC	4 cut(s)	160, 203, 669, 872
PflFI	GACNNNGTC	1 cut(s)	265
PinAI	ACCGGT	1 cut(s)	63
PkrI	GCNGC	5 cut(s)	210, 230, 843, 973, 976
PleI	GAGTC	1 cut(s)	601
PpsI	GAGTC	1 cut(s)	601
PscI	ACATGT	1 cut(s)	324
Psp6I	CCWGG	2 cut(s)	11, 804
PspFI	CCCAGC	3 cut(s)	153, 844, 924
PspGI	CCWGG	2 cut(s)	11, 804
PspN4I	GGNNCC	2 cut(s)	427, 850
PspPI	GGNCC	3 cut(s)	273, 363, 952
PsrI	GAACNNNNNNTAC	2 cut(s)	714, 746
PstNI	CAGNNNCTG	1 cut(s)	733
PsuI	RGATCY	2 cut(s)	124, 560
PsyI	GACNNNGTC	1 cut(s)	265
PvuII	CAGCTG	2 cut(s)	157, 844
RsaI	GTAC	6 cut(s)	23, 120, 323, 329, 392, 427
RsaNI	GTAC	6 cut(s)	22, 119, 322, 328, 391, 426
RseI	CAYNNNNRTG	2 cut(s)	471, 1025
SaqAI	TTAA	5 cut(s)	45, 84, 663, 788, 899
SatI	GCNGC	5 cut(s)	209, 229, 842, 972, 975
Sau3AI	GATC	5 cut(s)	124, 130, 340, 376, 560
Sau96I	GGNCC	3 cut(s)	273, 363, 952
ScaI	AGTACT	1 cut(s)	392
SchI	GAGTC	1 cut(s)	602
ScrFI	CCNGG	2 cut(s)	13, 806
SduI	GDGCHC	2 cut(s)	197, 574
SetI	ASST	8 cut(s)	159, 418, 660, 723, 732, 825, 846, 1003
SinI	GGWCC	1 cut(s)	952
SmiMI	CAYNNNNRTG	2 cut(s)	471, 1025
SmlI	CTYRAG	2 cut(s)	37, 662
SmoI	CTYRAG	2 cut(s)	37, 662
Sse9I	AATT	7 cut(s)	145, 531, 575, 678, 692, 789, 979
SspI	AATATT	1 cut(s)	185
SspMI	CTAG	2 cut(s)	449, 564
StyD4I	CCNGG	2 cut(s)	11, 804
TaaI	ACNGT	1 cut(s)	742
TaiI	ACGT	1 cut(s)	723
TaqI	TCGA	3 cut(s)	60, 343, 1034
TasI	AATT	7 cut(s)	145, 531, 575, 678, 692, 789, 979
TatI	WGTACW	3 cut(s)	321, 327, 390
TfiI	GAWTC	4 cut(s)	160, 203, 669, 872
Tru1I	TTAA	5 cut(s)	45, 84, 663, 788, 899
Tru9I	TTAA	5 cut(s)	45, 84, 663, 788, 899
TscAI	CASTG	4 cut(s)	144, 310, 885, 1027
TseFI	GTSAC	2 cut(s)	880, 1018
TseI	GCWGC	5 cut(s)	208, 228, 841, 971, 974
Tsp45I	GTSAC	2 cut(s)	880, 1018
TspDTI	ATGAA	5 cut(s)	69, 268, 483, 705, 1043
TspRI	CASTG	4 cut(s)	144, 310, 885, 1027
Tth111I	GACNNNGTC	1 cut(s)	265
Vha464I	CTTAAG	1 cut(s)	662
VpaK11BI	GGWCC	1 cut(s)	952
XagI	CCTNNNNNAGG	1 cut(s)	280
XapI	RAATTY	2 cut(s)	145, 678
XbaI	TCTAGA	1 cut(s)	448
XceI	RCATGY	1 cut(s)	328
XspI	CTAG	2 cut(s)	449, 564
ZrmI	AGTACT	1 cut(s)	392
Zsp2I	ATGCAT	3 cut(s)	255, 355, 508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.