Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000221

Physical Location & Seq

Genomic Coordinates Reverse (-)

57001768 .. 57003015

Gene Structure 1248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00325270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGATGAGTGTGTCTACTGTCTCTCCGATTTTGCATAATATCGATAACCTTGTTGGGTATCTCAAGAGGGGAAGAGGGTTAGATTGTGATTACAGTGACTTGGGATTCATAGATGAGAGGACAAAGAGGCCTAAGATTGAAGCTAATCTGGGAGTTCCAGAAGAGGCAAGATTTGCTTCTGATGAAATTTCCAGGTCTTGTGGTGTGAGACTTGGGTACATACCCAAGGGATTGGGGCTTAATGATGATGTAATCGATCGATTACGCAACGAAAACACTAAAAATTTATTGTTGAACGACCATAAGAAACTTCATTTGGTTCTTGATCTAGACCACACCCTGCTGAATACCACCTTCCTTGATAATATGTCACCAGACGAAGAATATTTGAAGACCCAAACCCAATCTGATCATTCTCTGCAATATGTTCACTTTGTGGACACTCCCAGTATGCAACTGATGACCAAGTTGAGGCCTTATATTAGGACGTTTTTAGTGCAAGCCAGTCAAATGTTTGAGCTGTCCATATACACAATGGGTAATCGAGCCTATGCGCTTGAAATGGCTAAGCTGCTTGACCCTGGAAAACAAATCTTTGGTGGTAGAGTCATATCGCGTAGTGATAGCACAGAAACAGATCGAAAGCGTCTAGATGTCCTGCTTGCAAGAGATTCTGCTGTTGTGATCCTTGATGATACGAAAGATGTATGGACAACTGACAACCAGGACAATGTAATAGAAATGCCAAGATACCATTTCTTTAGGTCTAGTTGTCAAAAGTTTGGCCTCAGTAATGGTAAGCCTTATTCTGAGTTGAAGACCGATGAATGTGATCGGTTTGGAGGAGCTTATCTTGCAAATGTACTCCAACTTCTTAAGCATATTCACACCATATTCTTTAATGAAGTTGAGTTACAAGGGTGGGATCTTATCGACAGAGATGTGAGGCTCGTGTTGAAAATCCTAAAGAAGGAAGTCTTGAAGGGCTGTAGAATTGTTTTCAGCCATGTCTTCCCCTCAAATGTCCAGGCTGATACTCATCCTTTGTGGAAGATGGTGGAGGAGTTAGGCGCTACTTGTTCAACACAAGTTGATCCATCAGTCACACATGTGGTTGCAGCCAATGCCCGAACACAGAAATCGTGTTGGGCAGTTAAAGAACGAAAATTTTTGGTGAATCCCCAGTGGATTCATACTACAAATTTTATGTGGCAAAGGCAACCTGAAGATAATTTCCCCTGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008022 GO:0008150 GO:0008152 GO:0008420 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016591 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT NIF PTCB-BRCT

Protein Analysis

415

Amino Acids

47.68

Weight (kDa)

6.4

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	105 - 253	5.4e-25	NLI interacting factor-like phosphatase
BRCT	PF00533	325 - 397	6.8e-09	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	345 - 396	1.2e-06	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58003 AT5G58003 AT5G58003
fragaria_vesca	FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_1g01060 FvH4_2g05941 FvH4_7g02340 FvH4_7g02631 FvH4_7g02801 FvH4_7g07841 FvH4_7g08260
malus_domestica	MD09G1131300.v1.1
prunus_persica	Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1 Prupe.7G261400_v2.0.a1
pyrus_communis	pycom09g05350
rosa_chinensis	RchiOBHm_Chr1g0324741 RchiOBHm_Chr2g0085821 RchiOBHm_Chr2g0147611 RchiOBHm_Chr4g0392421 RchiOBHm_Chr6g0254001 RchiOBHm_Chr6g0256111 RchiOBHm_Chr6g0256201 RchiOBHm_Chr6g0256301 RchiOBHm_Chr6g0257451 RchiOBHm_Chr6g0267911 RchiOBHm_Chr6g0276921 RchiOBHm_Chr7g0234511 RchiOBHm_Chr7g0234521 RchiOBHm_Chr7g0234531 RchiOBHm_Chr7g0234711 RchiOBHm_Chr7g0234721 RchiOBHm_Chr7g0234801 RchiOBHm_Chr7g0234841 RchiOBHm_Chr7g0234851
rosa_laevigata	RLG00000001210 RLG00000001218 RLG00000013348 RLG00000013351 RLG00000013354 RLG00000013969 RLG00000014699 RLG00000014794 RLG00000014949 RLG00000015721 RLG00000030176 RLG00000030180 RLG00000030183
rosa_multiflora	Rmu_sc0000434.1_g000006 Rmu_sc0001716.1_g000020 Rmu_sc0001800.1_g000011 Rmu_sc0001913.1_g000023 Rmu_sc0003301.1_g000015 Rmu_sc0003882.1_g000010 Rmu_sc0005080.1_g000013 Rmu_sc0006724.1_g000007 Rmu_sc0006759.1_g000001 Rmu_sc0006859.1_g000001 Rmu_sc0007217.1_g000009 Rmu_sc0010500.1_g000001 Rmu_sc0015353.1_g000005 Rmu_sc0017253.1_g000006 Rmu_sc0021133.1_g000001 Rmu_sc0033202.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155020 Rroxscaffold_4G00325270 Rroxscaffold_7G00200340 Rroxscaffold_7G00211310
rosa_rugosa	Rorug01G0046400 Rorug01G0463600 Rorug05G0571900 Rorug05G0572300 Rorug06G0034600 Rorug07G0285100 Rorug07G0285400 Rorug07G0285500 Rorug07G0285600
rosa_samantha	Rh1AG063200 Rh1AG063800 Rh1DG069200 Rh1DG070400 Rh2AG012600 Rh2BG013300 Rh2DG015000 Rh4AG042600 Rh4BG037500 Rh4CG045400 Rh4CG045600 Rh6AG065400 Rh6AG082000 Rh6AG082100 Rh6AG089900 Rh6AG156900 Rh6AG157000 Rh6AG157200 Rh6AG214900 Rh6AG215000 Rh6AG215200 Rh6AG291000 Rh6BG058300 Rh6BG074200 Rh6BG074300 Rh6BG081300 Rh6BG158100 Rh6BG158400 Rh6BG158700 Rh6BG219800 Rh6CG058400 Rh6CG071100 Rh6CG078000 Rh6CG157400 Rh6CG158100 Rh6CG222400 Rh6DG055200 Rh6DG068500 Rh6DG073700 Rh6DG143300 Rh6DG143700 Rh6DG144100 Rh6DG212600 Rh7AG440200 Rh7AG440300 Rh7BG413100 Rh7CG461400 Rh7CG461500 Rh7CG461900 Rh7CG462000 Rh7DG429900
rosa_wichuraiana	Rw1G005350 Rw2G001120 Rw4G003330 Rw6G005760 Rw6G007140 Rw6G007840 Rw6G013630 Rw6G013660 Rw6G018800 Rw6G025060 Rw7G036540 Rw7G036580 Rw7G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	14
AccII	CGCG	1 cut(s)	616
AclWI	GGATC	3 cut(s)	679, 933, 1088
AcsI	RAATTY	4 cut(s)	186, 283, 1166, 1201
AcuI	CTGAAG	1 cut(s)	1245
AdeI	CACNNNGTG	1 cut(s)	436
AfaI	GTAC	2 cut(s)	218, 864
AfiI	CCNNNNNNNGG	2 cut(s)	471, 970
AflII	CTTAAG	1 cut(s)	875
AflIII	ACRYGT	1 cut(s)	1108
AgsI	TTSAA	8 cut(s)	140, 295, 391, 560, 817, 958, 982, 1083
AjnI	CCWGG	4 cut(s)	191, 580, 723, 1026
AjuI	GAANNNNNNNTTGG	2 cut(s)	299, 331
AleI	CACNNNNGTG	1 cut(s)	1109
AluBI	AGCT	4 cut(s)	143, 520, 571, 848
AluI	AGCT	4 cut(s)	143, 520, 571, 848
Alw26I	GTCTC	2 cut(s)	25, 202
AlwI	GGATC	3 cut(s)	679, 933, 1088
AoxI	GGCC	3 cut(s)	128, 473, 784
ApeKI	GCWGC	2 cut(s)	571, 1118
ApoI	RAATTY	4 cut(s)	186, 283, 1166, 1201
AspLEI	GCGC	2 cut(s)	556, 1073
AsuHPI	GGTGA	2 cut(s)	363, 1186
BarI	GAAGNNNNNNTAC	4 cut(s)	855, 887, 897, 929
BauI	CACGAG	1 cut(s)	950
BbsI	GAAGAC	3 cut(s)	398, 824, 1003
BbvI	GCAGC	2 cut(s)	558, 1130
BccI	CCATC	2 cut(s)	1048, 1105
BciT130I	CCWGG	4 cut(s)	193, 582, 725, 1028
BclI	TGATCA	1 cut(s)	409
BcoDI	GTCTC	2 cut(s)	25, 202
BfaI	CTAG	3 cut(s)	329, 650, 768
BfmI	CTRYAG	1 cut(s)	988
BfoI	RGCGCY	1 cut(s)	1074
BfrI	CTTAAG	1 cut(s)	875
BisI	GCNGC	2 cut(s)	572, 1119
BlpI	GCTNAGC	1 cut(s)	567
BlsI	GCNGC	2 cut(s)	573, 1120
Bme1390I	CCNGG	4 cut(s)	193, 582, 725, 1028
BmrFI	CCNGG	4 cut(s)	193, 582, 725, 1028
BmrI	ACTGGG	2 cut(s)	441, 1177
BmuI	ACTGGG	2 cut(s)	441, 1177
BpiI	GAAGAC	3 cut(s)	398, 824, 1003
Bpu1102I	GCTNAGC	1 cut(s)	567
BpuEI	CTTGAG	1 cut(s)	47
Bsa29I	ATCGAT	3 cut(s)	42, 255, 259
BsaBI	GATNNNNATC	1 cut(s)	1038
BsaJI	CCNNGG	2 cut(s)	225, 580
BsaXI	ACNNNNNCTCC	2 cut(s)	7, 37
Bsc4I	CCNNNNNNNGG	2 cut(s)	471, 970
Bse1I	ACTGG	3 cut(s)	447, 504, 1183
Bse8I	GATNNNNATC	1 cut(s)	1038
BseBI	CCWGG	4 cut(s)	193, 582, 725, 1028
BseCI	ATCGAT	3 cut(s)	42, 255, 259
BseDI	CCNNGG	2 cut(s)	225, 580
BseGI	GGATG	1 cut(s)	1039
BseJI	GATNNNNATC	1 cut(s)	1038
BseLI	CCNNNNNNNGG	2 cut(s)	471, 970
BseMII	CTCAG	2 cut(s)	801, 802
BseNI	ACTGG	3 cut(s)	447, 504, 1183
BseRI	GAGGAG	2 cut(s)	858, 1076
BseXI	GCAGC	2 cut(s)	558, 1130
Bsh1236I	CGCG	1 cut(s)	616
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	3 cut(s)	130, 475, 786
BshVI	ATCGAT	3 cut(s)	42, 255, 259
BsiEI	CGRYCG	1 cut(s)	259
BslI	CCNNNNNNNGG	2 cut(s)	471, 970
BsmAI	GTCTC	2 cut(s)	25, 202
BsnI	GGCC	3 cut(s)	130, 475, 786
Bsp143I	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
Bsp1720I	GCTNAGC	1 cut(s)	567
BspANI	GGCC	3 cut(s)	130, 475, 786
BspCNI	CTCAG	2 cut(s)	801, 802
BspDI	ATCGAT	3 cut(s)	42, 255, 259
BspFNI	CGCG	1 cut(s)	616
BspPI	GGATC	3 cut(s)	679, 933, 1088
BspTI	CTTAAG	1 cut(s)	875
BsrI	ACTGG	3 cut(s)	447, 504, 1183
BssECI	CCNNGG	2 cut(s)	225, 580
BssMI	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
BssSI	CACGAG	1 cut(s)	950
BssT1I	CCWWGG	1 cut(s)	225
Bst2BI	CACGAG	1 cut(s)	950
Bst2UI	CCWGG	4 cut(s)	193, 582, 725, 1028
Bst4CI	ACNGT	2 cut(s)	19, 95
Bst6I	CTCTTC	2 cut(s)	67, 156
BstAFI	CTTAAG	1 cut(s)	875
BstAPI	GCANNNNNTGC	2 cut(s)	173, 1124
BstC8I	GCNNGC	2 cut(s)	501, 663
BstDEI	CTNAG	4 cut(s)	132, 567, 788, 810
BstENI	CCTNNNNNAGG	1 cut(s)	968
BstF5I	GGATG	1 cut(s)	1039
BstFNI	CGCG	1 cut(s)	616
BstH2I	RGCGCY	1 cut(s)	1074
BstHHI	GCGC	2 cut(s)	556, 1073
BstKTI	GATC	8 cut(s)	259, 328, 412, 640, 687, 835, 928, 1096
BstMAI	GTCTC	2 cut(s)	25, 202
BstMBI	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	3 cut(s)	173, 854, 1124
BstNI	CCWGG	4 cut(s)	193, 582, 725, 1028
BstNSI	RCATGY	1 cut(s)	1112
BstSCI	CCNGG	4 cut(s)	191, 580, 723, 1026
BstSFI	CTRYAG	1 cut(s)	988
BstUI	CGCG	1 cut(s)	616
BstV1I	GCAGC	2 cut(s)	558, 1130
BstV2I	GAAGAC	3 cut(s)	398, 824, 1003
BstX2I	RGATCY	1 cut(s)	925
BstXI	CCANNNNNNTGG	1 cut(s)	232
BstYI	RGATCY	1 cut(s)	925
Bsu15I	ATCGAT	3 cut(s)	42, 255, 259
BsuRI	GGCC	3 cut(s)	130, 475, 786
BsuTUI	ATCGAT	3 cut(s)	42, 255, 259
BtsCI	GGATG	1 cut(s)	1039
BtsIMutI	CAGTG	2 cut(s)	100, 1190
Cac8I	GCNNGC	2 cut(s)	501, 663
CfoI	GCGC	2 cut(s)	556, 1073
ClaI	ATCGAT	3 cut(s)	42, 255, 259
CseI	GACGC	1 cut(s)	635
Csp6I	GTAC	2 cut(s)	217, 863
CspCI	CAANNNNNGTGG	2 cut(s)	340, 375
CviAII	CATG	2 cut(s)	1007, 1109
CviQI	GTAC	2 cut(s)	217, 863
DdeI	CTNAG	4 cut(s)	132, 567, 788, 810
DpnI	GATC	8 cut(s)	258, 327, 411, 639, 686, 834, 927, 1095
DpnII	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
DraIII	CACNNNGTG	1 cut(s)	436
Eam1104I	CTCTTC	2 cut(s)	67, 156
EarI	CTCTTC	2 cut(s)	67, 156
Eco130I	CCWWGG	1 cut(s)	225
Eco147I	AGGCCT	2 cut(s)	130, 475
Eco57I	CTGAAG	1 cut(s)	1245
EcoNI	CCTNNNNNAGG	1 cut(s)	968
EcoRII	CCWGG	4 cut(s)	191, 580, 723, 1026
EcoT14I	CCWWGG	1 cut(s)	225
ErhI	CCWWGG	1 cut(s)	225
FaeI	CATG	2 cut(s)	1010, 1112
FalI	AAGNNNNNCTT	4 cut(s)	160, 192, 962, 994
FatI	CATG	2 cut(s)	1006, 1108
FbaI	TGATCA	1 cut(s)	409
FblI	GTMKAC	1 cut(s)	14
Fnu4HI	GCNGC	2 cut(s)	572, 1119
FokI	GGATG	1 cut(s)	1026
Fsp4HI	GCNGC	2 cut(s)	572, 1119
FspBI	CTAG	3 cut(s)	329, 650, 768
GlaI	GCGC	2 cut(s)	555, 1072
GluI	GCNGC	2 cut(s)	572, 1119
HaeII	RGCGCY	1 cut(s)	1074
HaeIII	GGCC	3 cut(s)	130, 475, 786
HgaI	GACGC	1 cut(s)	635
HhaI	GCGC	2 cut(s)	556, 1073
Hin1II	CATG	2 cut(s)	1010, 1112
Hin6I	GCGC	2 cut(s)	554, 1071
HinP1I	GCGC	2 cut(s)	554, 1071
HinfI	GANTC	5 cut(s)	105, 606, 671, 1177, 1189
HphI	GGTGA	2 cut(s)	363, 1186
Hpy166II	GTNNAC	3 cut(s)	15, 430, 439
Hpy188I	TCNGA	4 cut(s)	27, 181, 409, 811
Hpy188III	TCNNGA	6 cut(s)	64, 158, 323, 329, 650, 979
Hpy8I	GTNNAC	3 cut(s)	15, 430, 439
HpyAV	CCTTC	3 cut(s)	364, 964, 976
HpyCH4III	ACNGT	2 cut(s)	19, 95
HpyCH4IV	ACGT	1 cut(s)	488
HpyCH4V	TGCA	7 cut(s)	34, 421, 454, 499, 665, 857, 1118
HpyF10VI	GCNNNNNNNGC	3 cut(s)	173, 854, 1124
HpyF3I	CTNAG	4 cut(s)	132, 567, 788, 810
HpySE526I	ACGT	1 cut(s)	488
Hsp92II	CATG	2 cut(s)	1010, 1112
HspAI	GCGC	2 cut(s)	554, 1071
Ksp22I	TGATCA	1 cut(s)	409
Kzo9I	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
LmnI	GCTCC	1 cut(s)	845
Lsp1109I	GCAGC	2 cut(s)	558, 1130
MaeI	CTAG	3 cut(s)	329, 650, 768
MaeII	ACGT	1 cut(s)	488
MaeIII	GTNAC	4 cut(s)	95, 369, 912, 1102
MalI	GATC	8 cut(s)	258, 327, 411, 639, 686, 834, 927, 1095
MboI	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
MboII	GAAGA	8 cut(s)	84, 173, 392, 403, 829, 1003, 1063, 1238
MflI	RGATCY	1 cut(s)	925
MluCI	AATT	6 cut(s)	186, 283, 993, 1166, 1201, 1231
MlyI	GAGTC	1 cut(s)	615
MmeI	TCCRAC	1 cut(s)	892
MseI	TTAA	4 cut(s)	240, 876, 900, 1155
MslI	CAYNNNNRTG	1 cut(s)	1109
MspCI	CTTAAG	1 cut(s)	875
MspR9I	CCNGG	4 cut(s)	193, 582, 725, 1028
MvaI	CCWGG	4 cut(s)	193, 582, 725, 1028
MvnI	CGCG	1 cut(s)	616
MwoI	GCNNNNNNNGC	3 cut(s)	173, 854, 1124
NdeII	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
NlaIII	CATG	2 cut(s)	1010, 1112
NmuCI	GTSAC	3 cut(s)	95, 369, 1102
NspI	RCATGY	1 cut(s)	1112
OliI	CACNNNNGTG	1 cut(s)	1109
PceI	AGGCCT	2 cut(s)	130, 475
PciI	ACATGT	1 cut(s)	1108
PfeI	GAWTC	4 cut(s)	105, 671, 1177, 1189
PkrI	GCNGC	2 cut(s)	573, 1120
Ple19I	CGATCG	1 cut(s)	259
PleI	GAGTC	1 cut(s)	614
PpsI	GAGTC	1 cut(s)	614
PscI	ACATGT	1 cut(s)	1108
Psp6I	CCWGG	4 cut(s)	191, 580, 723, 1026
PspGI	CCWGG	4 cut(s)	191, 580, 723, 1026
PsuI	RGATCY	1 cut(s)	925
PvuI	CGATCG	1 cut(s)	259
RsaI	GTAC	2 cut(s)	218, 864
RsaNI	GTAC	2 cut(s)	217, 863
RseI	CAYNNNNRTG	1 cut(s)	1109
SaqAI	TTAA	4 cut(s)	240, 876, 900, 1155
SatI	GCNGC	2 cut(s)	572, 1119
Sau3AI	GATC	8 cut(s)	256, 325, 409, 637, 684, 832, 925, 1093
SchI	GAGTC	1 cut(s)	615
ScrFI	CCNGG	4 cut(s)	193, 582, 725, 1028
SfcI	CTRYAG	1 cut(s)	988
SmiMI	CAYNNNNRTG	1 cut(s)	1109
SmlI	CTYRAG	2 cut(s)	62, 875
SmoI	CTYRAG	2 cut(s)	62, 875
Sse9I	AATT	6 cut(s)	186, 283, 993, 1166, 1201, 1231
SseBI	AGGCCT	2 cut(s)	130, 475
SspI	AATATT	1 cut(s)	386
SspMI	CTAG	3 cut(s)	329, 650, 768
StuI	AGGCCT	2 cut(s)	130, 475
StyD4I	CCNGG	4 cut(s)	191, 580, 723, 1026
StyI	CCWWGG	1 cut(s)	225
TaaI	ACNGT	2 cut(s)	19, 95
TaiI	ACGT	1 cut(s)	491
TaqI	TCGA	6 cut(s)	42, 255, 259, 544, 640, 933
TaqII	GACCGA	1 cut(s)	836
TasI	AATT	6 cut(s)	186, 283, 993, 1166, 1201, 1231
TatI	WGTACW	1 cut(s)	862
TfiI	GAWTC	4 cut(s)	105, 671, 1177, 1189
Tru1I	TTAA	4 cut(s)	240, 876, 900, 1155
Tru9I	TTAA	4 cut(s)	240, 876, 900, 1155
TscAI	CASTG	2 cut(s)	100, 1190
TseFI	GTSAC	3 cut(s)	95, 369, 1102
TseI	GCWGC	2 cut(s)	571, 1118
Tsp45I	GTSAC	3 cut(s)	95, 369, 1102
TspDTI	ATGAA	6 cut(s)	97, 198, 302, 840, 918, 1181
TspRI	CASTG	2 cut(s)	100, 1190
Vha464I	CTTAAG	1 cut(s)	875
XagI	CCTNNNNNAGG	1 cut(s)	968
XapI	RAATTY	4 cut(s)	186, 283, 1166, 1201
XbaI	TCTAGA	2 cut(s)	328, 649
XceI	RCATGY	1 cut(s)	1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	532
XmiI	GTMKAC	1 cut(s)	14
XspI	CTAG	3 cut(s)	329, 650, 768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.