Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

12635687 .. 12639652

Gene Structure 3966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g20410.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGAACATTCTTCTTCTCCAGCTAGCTTTCCAAGATGGGCACCGAGTCCAAGCCCCTCAAGAGGATTGTTACTATCACCACCTGTGGAAGACGCCAAGATCAAGTCCAGTAGTGCTGCTGTTCATGACTCTGCAGAACATGCGGTATCCTTGTCATGTTCTAGCATGGAGAGGATCTTCCCATTTAGCATTGGATTCAAAAGCAATACTTCTGCTGTTACTGCTTATGGTTCTGCGGTTGAAACGTCACTAGAAGCTGAAAATGCTCATGTCCCAAGGACGAATGGTGCTAGTGCTACTCATGTAGTGGAGCTTGGGCCAAGAGAGAATGGTGCTTCTTTGACATGGGACGACTTGTGGGTCGGAGTAAGTGATGGGAAAGGCGGGCAGAAGATGATTTTGCAGGGGCTTACTGGGTTTGCTCAGCCTGGTGAGGTTTTGGCCATTATGGGTCCTTCTGGCTGTGGCAAATCTACCCTTTTGGATGCTTTGGGAGGAAGGCTAAGTTCAAGCACACAGCAGAAAGGGAAGATCCTAATCAATGGCCGCAAAGAAACTCTTGCCTTTCGAACCTCAGCATATGTGGCACAAGATGACACACTAATGACAACCTTAACAGTAAAGGAAGTTGTGTACTACTCAGCTCAACTACAACTCCCTAACTCCATGTCGAAAGCAGAAAAGAAGGTAAGAGCAGAGACGACAATAAAGGAAATGGGTTTGCGAGACTCCATGGACACAAGAATTGGAGGTTGGGGCAAAAAAGGCCTCAGTGGTGGGCAAAAGAGAAGAGTTAGCATCTGCATTGAGATCTTGACTCGTCCAAAGCTTCTCTTCCTTGATGAGCCTACTAGTGGACTAGACAGTGCAGCATCTTACCATGTCATGAACCGCATTATTAAACTGGCTCACCACGATGGAATGACAGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAGCTTTTCCAAAATCTTTGCCTTCTCTCATCTGGTAGAACAGTCTATTTTGGCCCTGCTTCACAGGCAGAGGAGTTTTTTGTTTCAAATGGCTTTCCATGCCCAACTCTGAGAAATCCATCAGATCACTACCTGAGAACTATTAACAAGGACTTTGACACTGACATTGAACAAGGCCTTGGTGGAAAAACAAGAACAGAGGAAGCAATTGATATTCTCATAAATTCATACAAGTCTTCAAGTACATTCAAGCAACTTCATGACCAGGTTGCTAAAATTTGCCAAGAGAAACGTGGAGCTCTAGAGAAGGGAAGTCAAGCCAACTTCATGACTCAATGCCTGGTTTTGACAAGGAGATCCTTTGTGAACATGTATCGCGATCTAGGCTACTACTGGCTTCGTCTTTTCATTTACATTTCCTTGTGCTTATGTGTTGGGACTATCTATCATGAAATTGACACCAGTTATGACTCGATACAGGATAGAGCAACAAGTCTGATGTTCGTTGCAGCATTCTTAACTTTCATGGCAATAGGTGGATTTCCTTCTTATGTAGAGGACATGAAGATTTTCGAGCGTGAAAGATTAAACGGGCACTACGGTGTTGCTTCATTTGTTGTTGGAAACTCATTTTCATCCGTTCCATACTTACTGATGATCTCTTTAATCCCCGGAGCAATAGCCTATTTCCTTGTTGGCTTTCAGAGAACCTTTGATCACTTCGCCTATTTCGCATTGGCTCTGTTTGTGGCGCTGATGTTGGTTGAGAGCCTGATGATGATTGTAGCAAGCATTGTGCCAGATTTCCTGATGGGTGTTATCACAGGTTCTGGAATTCTTGGAGTGATGTTGTTGAATGGAGGTTTCTTCCGAAAACCTAACGATATGCCAAAGCCCTTCTGGAGATACCCAATGTACTATATTGGATTCCACAATTATGTGAATCAAGGATTATACAAGAATGAGTTTGAAGGACTAACATTCCCCAATAATCAAGTAGGAGGGCCACCCACCATTACTGGTGAAGAAATATTGAAGAGTATGTGGCAAATGGAGATGGGTCACTCTAAGTGGGTTGATTTTGCCATTTTGTTTGGAATGGTAATAGTTTACAGGCTCATGTTCTTTGGGATCATCAAGACAAATGAAAAGCTCTCGCCAATCATCAAAGCTTTTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

716

Amino Acids

79.02

Weight (kDa)

7.61

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	138 - 285	8.2e-28	ABC transporter
ABC2_membrane_7	PF19055	315 - 371	3.3e-09	ABC-2 type transporter
ABC2_membrane	PF01061	426 - 638	5.4e-42	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	359
AccB1I	GGYRCC	1 cut(s)	40
AccII	CGCG	1 cut(s)	1344
AciI	CCGC	5 cut(s)	143, 236, 384, 547, 892
AclWI	GGATC	4 cut(s)	182, 526, 1317, 2105
AcoI	YGGCCR	2 cut(s)	441, 544
AcsI	RAATTY	3 cut(s)	1189, 1242, 1800
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	3 cut(s)	635, 1210, 1883
AfiI	CCNNNNNNNGG	2 cut(s)	62, 854
AflIII	ACRYGT	1 cut(s)	1335
AhlI	ACTAGT	1 cut(s)	851
AjnI	CCWGG	3 cut(s)	427, 1230, 1305
AjuI	GAANNNNNNNTTGG	4 cut(s)	736, 768, 1128, 1160
AleI	CACNNNNGTG	1 cut(s)	1566
Alw21I	GWGCWC	1 cut(s)	1267
Alw26I	GTCTC	2 cut(s)	692, 720
AlwI	GGATC	4 cut(s)	182, 526, 1317, 2105
AlwNI	CAGNNNCTG	1 cut(s)	1796
AoxI	GGCC	7 cut(s)	317, 441, 544, 766, 1018, 1141, 1970
ApeKI	GCWGC	3 cut(s)	116, 869, 1475
ApoI	RAATTY	3 cut(s)	1189, 1242, 1800
Asp700I	GAANNNNTTC	1 cut(s)	1535
AspLEI	GCGC	1 cut(s)	1720
AspS9I	GGNCC	4 cut(s)	317, 452, 1019, 1970
AsuC2I	CCSGG	1 cut(s)	1638
AsuHPI	GGTGA	4 cut(s)	69, 443, 902, 2000
AsuII	TTCGAA	1 cut(s)	568
AsuNHI	GCTAGC	1 cut(s)	23
AvaII	GGWCC	1 cut(s)	452
BaeGI	GKGCMC	2 cut(s)	43, 1563
BalI	TGGCCA	1 cut(s)	443
BanI	GGYRCC	1 cut(s)	40
BanII	GRGCYC	1 cut(s)	1267
BbsI	GAAGAC	2 cut(s)	96, 1194
Bbv12I	GWGCWC	1 cut(s)	1267
BbvCI	CCTCAGC	1 cut(s)	574
BbvI	GCAGC	3 cut(s)	103, 881, 1487
BccI	CCATC	6 cut(s)	30, 368, 911, 1093, 1771, 2017
BciT130I	CCWGG	3 cut(s)	429, 1232, 1307
BciVI	GTATCC	1 cut(s)	157
BclI	TGATCA	1 cut(s)	1681
BcnI	CCSGG	1 cut(s)	1638
BcoDI	GTCTC	2 cut(s)	692, 720
BcuI	ACTAGT	1 cut(s)	851
BfaI	CTAG	9 cut(s)	24, 162, 251, 291, 852, 860, 951, 1268, 1349
BfmI	CTRYAG	1 cut(s)	132
BfoI	RGCGCY	1 cut(s)	1721
BfuI	GTATCC	1 cut(s)	157
BglII	AGATCT	1 cut(s)	810
BisI	GCNGC	4 cut(s)	117, 547, 870, 1476
BlpI	GCTNAGC	1 cut(s)	423
BlsI	GCNGC	4 cut(s)	118, 548, 871, 1477
Bme1390I	CCNGG	4 cut(s)	429, 1232, 1307, 1638
Bme18I	GGWCC	1 cut(s)	452
BmgT120I	GGNCC	4 cut(s)	317, 452, 1019, 1970
BmiI	GGNNCC	2 cut(s)	42, 453
BmrFI	CCNGG	4 cut(s)	429, 1232, 1307, 1638
BmrI	ACTGGG	1 cut(s)	423
BmsI	GCATC	4 cut(s)	475, 807, 881, 944
BmtI	GCTAGC	1 cut(s)	27
BmuI	ACTGGG	1 cut(s)	423
BpiI	GAAGAC	2 cut(s)	96, 1194
BpmI	CTGGAG	1 cut(s)	1888
Bpu10I	CCTNAGC	1 cut(s)	574
Bpu1102I	GCTNAGC	1 cut(s)	423
Bpu14I	TTCGAA	1 cut(s)	568
BpuEI	CTTGAG	1 cut(s)	43
BpuMI	CCSGG	1 cut(s)	1638
BsaBI	GATNNNNATC	1 cut(s)	536
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	4 cut(s)	275, 732, 1144, 1636
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	2 cut(s)	62, 854
Bse1I	ACTGG	6 cut(s)	108, 418, 909, 1364, 1428, 1990
Bse8I	GATNNNNATC	1 cut(s)	536
BseBI	CCWGG	3 cut(s)	429, 1232, 1307
BseDI	CCNNGG	4 cut(s)	275, 732, 1144, 1636
BseGI	GGATG	2 cut(s)	490, 1601
BseJI	GATNNNNATC	1 cut(s)	536
BseLI	CCNNNNNNNGG	2 cut(s)	62, 854
BseMII	CTCAG	6 cut(s)	437, 588, 654, 784, 1067, 1091
BseNI	ACTGG	6 cut(s)	108, 418, 909, 1364, 1428, 1990
BseRI	GAGGAG	1 cut(s)	1052
BseSI	GKGCMC	2 cut(s)	43, 1563
BseXI	GCAGC	3 cut(s)	103, 881, 1487
BsgI	GTGCAG	1 cut(s)	888
Bsh1236I	CGCG	1 cut(s)	1344
BshFI	GGCC	7 cut(s)	319, 443, 546, 768, 1020, 1143, 1972
BshNI	GGYRCC	1 cut(s)	40
BsiHKAI	GWGCWC	1 cut(s)	1267
BsiSI	CCGG	1 cut(s)	1638
BslFI	GGGAC	3 cut(s)	257, 362, 1417
BslI	CCNNNNNNNGG	2 cut(s)	62, 854
BsmAI	GTCTC	2 cut(s)	692, 720
BsmBI	CGTCTC	1 cut(s)	692
BsmFI	GGGAC	3 cut(s)	257, 362, 1417
BsmI	GAATGC	1 cut(s)	1478
BsnI	GGCC	7 cut(s)	319, 443, 546, 768, 1020, 1143, 1972
Bsp119I	TTCGAA	1 cut(s)	568
Bsp1286I	GDGCHC	3 cut(s)	43, 1267, 1563
Bsp1720I	GCTNAGC	1 cut(s)	423
Bsp19I	CCATGG	1 cut(s)	732
Bsp68I	TCGCGA	1 cut(s)	1344
BspACI	CCGC	5 cut(s)	143, 236, 384, 547, 892
BspANI	GGCC	7 cut(s)	319, 443, 546, 768, 1020, 1143, 1972
BspCNI	CTCAG	6 cut(s)	436, 587, 653, 783, 1068, 1092
BspFNI	CGCG	1 cut(s)	1344
BspHI	TCATGA	5 cut(s)	124, 885, 1225, 1293, 1414
BspLI	GGNNCC	2 cut(s)	42, 453
BspMAI	CTGCAG	1 cut(s)	136
BspOI	GCTAGC	1 cut(s)	27
BspPI	GGATC	4 cut(s)	182, 526, 1317, 2105
BspT104I	TTCGAA	1 cut(s)	568
BspT107I	GGYRCC	1 cut(s)	40
BsrI	ACTGG	6 cut(s)	108, 418, 909, 1364, 1428, 1990
BssECI	CCNNGG	4 cut(s)	275, 732, 1144, 1636
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	3 cut(s)	275, 732, 1144
Bst2UI	CCWGG	3 cut(s)	429, 1232, 1307
Bst4CI	ACNGT	5 cut(s)	619, 866, 928, 1009, 1568
Bst6I	CTCTTC	3 cut(s)	784, 839, 1997
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	140
BstBI	TTCGAA	1 cut(s)	568
BstC8I	GCNNGC	3 cut(s)	25, 386, 1756
BstDEI	CTNAG	8 cut(s)	423, 503, 574, 640, 770, 1076, 1100, 2034
BstDSI	CCRYGG	1 cut(s)	732
BstF5I	GGATG	2 cut(s)	490, 1601
BstFNI	CGCG	1 cut(s)	1344
BstH2I	RGCGCY	1 cut(s)	1721
BstHHI	GCGC	1 cut(s)	1720
BstMAI	GTCTC	2 cut(s)	692, 720
BstMWI	GCNNNNNNNGC	9 cut(s)	140, 221, 263, 584, 765, 1031, 1065, 1350, 1697
BstNI	CCWGG	3 cut(s)	429, 1232, 1307
BstNSI	RCATGY	2 cut(s)	143, 1339
BstSCI	CCNGG	4 cut(s)	427, 1230, 1305, 1636
BstSFI	CTRYAG	1 cut(s)	132
BstSLI	GKGCMC	2 cut(s)	43, 1563
BstUI	CGCG	1 cut(s)	1344
BstV1I	GCAGC	3 cut(s)	103, 881, 1487
BstV2I	GAAGAC	2 cut(s)	96, 1194
BstX2I	RGATCY	4 cut(s)	174, 531, 810, 1322
BstYI	RGATCY	4 cut(s)	174, 531, 810, 1322
BsuI	GTATCC	1 cut(s)	157
BsuRI	GGCC	7 cut(s)	319, 443, 546, 768, 1020, 1143, 1972
BtgI	CCRYGG	1 cut(s)	732
BtsCI	GGATG	2 cut(s)	490, 1601
BtsI	GCAGTG	1 cut(s)	961
BtsIMutI	CAGTG	4 cut(s)	778, 871, 961, 1125
BtuMI	TCGCGA	1 cut(s)	1344
Cac8I	GCNNGC	3 cut(s)	25, 386, 1756
CaiI	CAGNNNCTG	1 cut(s)	1796
CciI	TCATGA	5 cut(s)	124, 885, 1225, 1293, 1414
CfoI	GCGC	1 cut(s)	1720
Cfr13I	GGNCC	4 cut(s)	317, 452, 1019, 1970
CseI	GACGC	1 cut(s)	101
CsiI	ACCWGGT	1 cut(s)	1230
Csp6I	GTAC	3 cut(s)	634, 1209, 1882
CviQI	GTAC	3 cut(s)	634, 1209, 1882
DdeI	CTNAG	8 cut(s)	423, 503, 574, 640, 770, 1076, 1100, 2034
DrdI	GACNNNNNNGTC	1 cut(s)	359
DseDI	GACNNNNNNGTC	1 cut(s)	359
EaeI	YGGCCR	2 cut(s)	441, 544
Eam1104I	CTCTTC	3 cut(s)	784, 839, 1997
EarI	CTCTTC	3 cut(s)	784, 839, 1997
Ecl136II	GAGCTC	1 cut(s)	1265
Eco130I	CCWWGG	3 cut(s)	275, 732, 1144
Eco147I	AGGCCT	2 cut(s)	768, 1143
Eco24I	GRGCYC	1 cut(s)	1267
Eco47I	GGWCC	1 cut(s)	452
Eco53kI	GAGCTC	1 cut(s)	1265
EcoICRI	GAGCTC	1 cut(s)	1265
EcoO109I	RGGNCCY	1 cut(s)	452
EcoRI	GAATTC	1 cut(s)	1800
EcoRII	CCWGG	3 cut(s)	427, 1230, 1305
EcoT14I	CCWWGG	3 cut(s)	275, 732, 1144
EcoT38I	GRGCYC	1 cut(s)	1267
ErhI	CCWWGG	3 cut(s)	275, 732, 1144
Esp3I	CGTCTC	1 cut(s)	692
FalI	AAGNNNNNCTT	7 cut(s)	193, 225, 543, 575, 818, 850, 2127
FaqI	GGGAC	3 cut(s)	257, 362, 1417
FauI	CCCGC	1 cut(s)	377
FauNDI	CATATG	1 cut(s)	580
FbaI	TGATCA	1 cut(s)	1681
Fnu4HI	GCNGC	4 cut(s)	117, 547, 870, 1476
FokI	GGATG	2 cut(s)	497, 1588
FriOI	GRGCYC	1 cut(s)	1267
Fsp4HI	GCNGC	4 cut(s)	117, 547, 870, 1476
FspBI	CTAG	9 cut(s)	24, 162, 251, 291, 852, 860, 951, 1268, 1349
GlaI	GCGC	1 cut(s)	1719
GluI	GCNGC	4 cut(s)	117, 547, 870, 1476
GsuI	CTGGAG	1 cut(s)	1888
HaeII	RGCGCY	1 cut(s)	1721
HaeIII	GGCC	7 cut(s)	319, 443, 546, 768, 1020, 1143, 1972
HapII	CCGG	1 cut(s)	1638
HgaI	GACGC	1 cut(s)	101
HhaI	GCGC	1 cut(s)	1720
Hin1I	GRCGYC	1 cut(s)	93
Hin6I	GCGC	1 cut(s)	1718
HinP1I	GCGC	1 cut(s)	1718
HindIII	AAGCTT	2 cut(s)	827, 2136
HinfI	GANTC	9 cut(s)	46, 128, 195, 728, 817, 1297, 1436, 1893, 1909
HpaII	CCGG	1 cut(s)	1638
HphI	GGTGA	4 cut(s)	69, 443, 902, 2000
Hpy166II	GTNNAC	4 cut(s)	634, 857, 1333, 2077
Hpy188I	TCNGA	6 cut(s)	365, 1077, 1090, 1464, 1671, 1838
Hpy8I	GTNNAC	4 cut(s)	634, 857, 1333, 2077
HpyAV	CCTTC	8 cut(s)	465, 492, 679, 998, 1267, 1521, 1873, 1931
HpyCH4III	ACNGT	5 cut(s)	619, 866, 928, 1009, 1568
HpyCH4IV	ACGT	2 cut(s)	245, 1258
HpyCH4V	TGCA	6 cut(s)	134, 403, 804, 869, 935, 1475
HpyF10VI	GCNNNNNNNGC	9 cut(s)	140, 221, 263, 584, 765, 1031, 1065, 1350, 1697
HpyF3I	CTNAG	8 cut(s)	423, 503, 574, 640, 770, 1076, 1100, 2034
HpySE526I	ACGT	2 cut(s)	245, 1258
Hsp92I	GRCGYC	1 cut(s)	93
HspAI	GCGC	1 cut(s)	1718
Ksp22I	TGATCA	1 cut(s)	1681
LmnI	GCTCC	3 cut(s)	310, 1262, 1640
Lsp1109I	GCAGC	3 cut(s)	103, 881, 1487
LweI	GCATC	4 cut(s)	475, 807, 881, 944
MabI	ACCWGGT	1 cut(s)	1230
MaeI	CTAG	9 cut(s)	24, 162, 251, 291, 852, 860, 951, 1268, 1349
MaeII	ACGT	2 cut(s)	245, 1258
MaeIII	GTNAC	4 cut(s)	69, 217, 246, 2027
MfeI	CAATTG	1 cut(s)	1173
MflI	RGATCY	4 cut(s)	174, 531, 810, 1322
MhlI	GDGCHC	3 cut(s)	43, 1267, 1563
MlsI	TGGCCA	1 cut(s)	443
MluCI	AATT	8 cut(s)	744, 939, 1173, 1189, 1242, 1419, 1800, 1900
MluNI	TGGCCA	1 cut(s)	443
MlyI	GAGTC	6 cut(s)	55, 122, 722, 811, 1291, 1430
MmeI	TCCRAC	2 cut(s)	343, 1567
Mox20I	TGGCCA	1 cut(s)	443
MroXI	GAANNNNTTC	1 cut(s)	1535
MscI	TGGCCA	1 cut(s)	443
MseI	TTAA	6 cut(s)	614, 900, 1110, 1484, 1553, 1631
MslI	CAYNNNNRTG	4 cut(s)	602, 915, 1566, 1902
Msp20I	TGGCCA	1 cut(s)	443
MspI	CCGG	1 cut(s)	1638
MspR9I	CCNGG	4 cut(s)	429, 1232, 1307, 1638
MunI	CAATTG	1 cut(s)	1173
Mva1269I	GAATGC	1 cut(s)	1478
MvaI	CCWGG	3 cut(s)	429, 1232, 1307
MvnI	CGCG	1 cut(s)	1344
MwoI	GCNNNNNNNGC	9 cut(s)	140, 221, 263, 584, 765, 1031, 1065, 1350, 1697
NciI	CCSGG	1 cut(s)	1638
NcoI	CCATGG	1 cut(s)	732
NdeI	CATATG	1 cut(s)	580
NheI	GCTAGC	1 cut(s)	23
NlaIV	GGNNCC	2 cut(s)	42, 453
NmuCI	GTSAC	2 cut(s)	246, 2027
NruI	TCGCGA	1 cut(s)	1344
NspI	RCATGY	2 cut(s)	143, 1339
NspV	TTCGAA	1 cut(s)	568
OliI	CACNNNNGTG	1 cut(s)	1566
PagI	TCATGA	5 cut(s)	124, 885, 1225, 1293, 1414
PceI	AGGCCT	2 cut(s)	768, 1143
PciI	ACATGT	1 cut(s)	1335
PctI	GAATGC	1 cut(s)	1478
PdmI	GAANNNNTTC	1 cut(s)	1535
PfeI	GAWTC	3 cut(s)	195, 1893, 1909
PkrI	GCNGC	4 cut(s)	118, 548, 871, 1477
PleI	GAGTC	6 cut(s)	54, 122, 722, 811, 1291, 1430
PpsI	GAGTC	6 cut(s)	54, 122, 722, 811, 1291, 1430
PpuMI	RGGWCCY	1 cut(s)	452
PscI	ACATGT	1 cut(s)	1335
Psp124BI	GAGCTC	1 cut(s)	1267
Psp5II	RGGWCCY	1 cut(s)	452
Psp6I	CCWGG	3 cut(s)	427, 1230, 1305
PspGI	CCWGG	3 cut(s)	427, 1230, 1305
PspN4I	GGNNCC	2 cut(s)	42, 453
PspPI	GGNCC	4 cut(s)	317, 452, 1019, 1970
PspPPI	RGGWCCY	1 cut(s)	452
PstI	CTGCAG	1 cut(s)	136
PstNI	CAGNNNCTG	1 cut(s)	1796
PsuI	RGATCY	4 cut(s)	174, 531, 810, 1322
RruI	TCGCGA	1 cut(s)	1344
RsaI	GTAC	3 cut(s)	635, 1210, 1883
RsaNI	GTAC	3 cut(s)	634, 1209, 1882
RseI	CAYNNNNRTG	4 cut(s)	602, 915, 1566, 1902
SacI	GAGCTC	1 cut(s)	1267
SaqAI	TTAA	6 cut(s)	614, 900, 1110, 1484, 1553, 1631
SatI	GCNGC	4 cut(s)	117, 547, 870, 1476
Sau96I	GGNCC	4 cut(s)	317, 452, 1019, 1970
SchI	GAGTC	6 cut(s)	55, 122, 722, 811, 1291, 1430
ScrFI	CCNGG	4 cut(s)	429, 1232, 1307, 1638
SduI	GDGCHC	3 cut(s)	43, 1267, 1563
SexAI	ACCWGGT	1 cut(s)	1230
SfaNI	GCATC	4 cut(s)	475, 807, 881, 944
SfcI	CTRYAG	1 cut(s)	132
SfuI	TTCGAA	1 cut(s)	568
SinI	GGWCC	1 cut(s)	452
SmiMI	CAYNNNNRTG	4 cut(s)	602, 915, 1566, 1902
SmlI	CTYRAG	1 cut(s)	58
SmoI	CTYRAG	1 cut(s)	58
SpeI	ACTAGT	1 cut(s)	851
Sse9I	AATT	8 cut(s)	744, 939, 1173, 1189, 1242, 1419, 1800, 1900
SseBI	AGGCCT	2 cut(s)	768, 1143
SsiI	CCGC	5 cut(s)	143, 236, 384, 547, 892
SspI	AATATT	1 cut(s)	1998
SspMI	CTAG	9 cut(s)	24, 162, 251, 291, 852, 860, 951, 1268, 1349
SstI	GAGCTC	1 cut(s)	1267
StuI	AGGCCT	2 cut(s)	768, 1143
StyD4I	CCNGG	4 cut(s)	427, 1230, 1305, 1636
StyI	CCWWGG	3 cut(s)	275, 732, 1144
TaaI	ACNGT	5 cut(s)	619, 866, 928, 1009, 1568
TaiI	ACGT	2 cut(s)	248, 1261
TaqI	TCGA	4 cut(s)	568, 671, 1439, 1539
TasI	AATT	8 cut(s)	744, 939, 1173, 1189, 1242, 1419, 1800, 1900
TatI	WGTACW	3 cut(s)	633, 1208, 1881
TauI	GCSGC	1 cut(s)	549
TfiI	GAWTC	3 cut(s)	195, 1893, 1909
Tru1I	TTAA	6 cut(s)	614, 900, 1110, 1484, 1553, 1631
Tru9I	TTAA	6 cut(s)	614, 900, 1110, 1484, 1553, 1631
TscAI	CASTG	4 cut(s)	778, 871, 961, 1132
TseFI	GTSAC	2 cut(s)	246, 2027
TseI	GCWGC	3 cut(s)	116, 869, 1475
Tsp45I	GTSAC	2 cut(s)	246, 2027
TspGWI	ACGGA	1 cut(s)	1594
TspRI	CASTG	4 cut(s)	778, 871, 961, 1132
VpaK11BI	GGWCC	1 cut(s)	452
XapI	RAATTY	3 cut(s)	1189, 1242, 1800
XbaI	TCTAGA	1 cut(s)	1267
XceI	RCATGY	2 cut(s)	143, 1339
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1256, 1863
XmnI	GAANNNNTTC	1 cut(s)	1535
XspI	CTAG	9 cut(s)	24, 162, 251, 291, 852, 860, 951, 1268, 1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.