Rh2DG242700

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
24764842 .. 24766603
1762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG242700.1

Sequence Viewer

Length: 1329 bp
ATGAACCGCATTATTAAACTGGCTCACCGCGATGGAACGACAGTTATTGCATCAATTCATCAACCAAGCGGTGAAGTTTTTGAGCTTTTCCAAAATCTTTGTCTTCTCTCCTCTGGTAGAACAGTCTATTTTGGCCCTGCTTCACAGGCAGAACAGTTTTTTGCTTCAAATGGCTTCCCTTGTCCAACGCTGAGAAACCCATCAGATCACTACCTTAGGACTATCAACAAGGACTTTGATGTTGACATTGAACAAGGGCTTGATGGAAAAACAAGCACCGAGGAGGCAATCAATATTCTCATAGGATCATACAAGTCTTCAAGTACTTTAAAGCAAGTTCAGCACAATGTAACTGAGATTTGCCAACAGAAAGGTGGAGCTCTAGAGAAGGGAAGCCAGGCCAACTTCATAACTCAATGCCTAGTTCTGACAAGGAGATCATTTGTGAACATGTATCGCGATCTAGGCTACTACTGGCTTCGTCTTGCAATTTACATTTCCTTGTGCTTATGTGTAGGGACTATTTTTCATCACATTGGCTCCAATTTTGGCTCAATACAGGCTAGAGGATCAATGCTCATGTTTGTTTCAGGATTCTTGACTTTCATGGCAATAGGTGGATTCCCTTCTTTCGTAGAAGACATGATCGTTTTCTCTGTCGCCAATAAGATCTTTGAGCGAGAAAGGTTAAATGGGCACTACAGAGCTGCCGCATTTGTTGTTGGAAACACATTTTCCTCCATTCCATACTTACTCATGATCTCTTTAATTCCTGGAGCAATAGCCTATTACCTTGTTGGCCTTCAGAAGAGCTGTGATCACTTCGCCTATTCTGCATTGGTTATGTTTGTGTGTCTGATGTTGGTTGAGAGCCTAATGATGATTGTAGCAAGCATTGTCCCGGACTTCCTCATGGGGATTATCACAGGTGCGGGAATTCAAGGAGTGATGATCTTGAATGGAGGTTTCTTCCAAAAACCTGACTATCTTCCGAAGCCCTTCTGGAGATACCCAATGTACTATGTTGGATTCCACAAGTATTCAAATCAAGGTTACTACAAGAATGAGTTTCTAGGACTAACATTCCCCTATAATCAAGAAGGGGAAGGCATCATTACTGGTGAAGATATATTGAAAAATATTTGGCAAGTGGAGTTGGGCTATTCTAAGTGGGTTGATCTATCGATTTTGTTTGGAATGGTAATTGTTTACAGGCTCATGTTTTTGGGAATCATAAAGTTTAGTGAAAAGGTTGTGCCAATCATCAAAGCTCTTCTTGTCGGTGTTCCCAAAGACTCTGAAGCGTTCACGGATAACCCATCCTCCTAG

Protein Analysis

442

Amino Acids

49.53

Weight (kDa)

7.09

Isoelectric Point (pI)

33.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane_7 PF19055 20 - 76 3e-09 ABC-2 type transporter
ABC2_membrane PF01061 138 - 357 1.6e-37 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000287)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 30, 459
AciI CCGC 5 cut(s) 7, 28, 69, 711, 932
AclWI GGATC 2 cut(s) 313, 577
AcsI RAATTY 1 cut(s) 936
AcuI CTGAAG 2 cut(s) 788, 1320
AfaI GTAC 2 cut(s) 325, 1019
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 7 cut(s) 168, 251, 321, 941, 958, 1044, 1135
AjnI CCWGG 2 cut(s) 396, 772
AluBI AGCT 5 cut(s) 85, 380, 707, 813, 1271
AluI AGCT 5 cut(s) 85, 380, 707, 813, 1271
Alw21I GWGCWC 1 cut(s) 382
AlwI GGATC 2 cut(s) 313, 577
AoxI GGCC 3 cut(s) 133, 399, 799
ApeKI GCWGC 1 cut(s) 707
ApoI RAATTY 1 cut(s) 936
ArsI GACNNNNNNTTYG 2 cut(s) 85, 117
Asp700I GAANNNNTTC 1 cut(s) 998
AspS9I GGNCC 1 cut(s) 134
AsuC2I CCSGG 1 cut(s) 902
AsuHPI GGTGA 3 cut(s) 17, 83, 1133
AxyI CCTNAGG 1 cut(s) 215
BaeGI GKGCMC 1 cut(s) 699
BanII GRGCYC 1 cut(s) 382
BbsI GAAGAC 3 cut(s) 95, 309, 645
Bbv12I GWGCWC 1 cut(s) 382
BbvI GCAGC 1 cut(s) 694
BccI CCATC 4 cut(s) 26, 208, 257, 1327
BciT130I CCWGG 2 cut(s) 398, 774
BclI TGATCA 1 cut(s) 817
BcnI CCSGG 1 cut(s) 902
BfaI CTAG 6 cut(s) 383, 422, 464, 564, 1073, 1327
BfmI CTRYAG 1 cut(s) 700
BglII AGATCT 1 cut(s) 669
BisI GCNGC 2 cut(s) 708, 711
BlsI GCNGC 2 cut(s) 709, 712
BmcAI AGTACT 1 cut(s) 325
Bme1390I CCNGG 3 cut(s) 398, 774, 902
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 1 cut(s) 541
BmrFI CCNGG 3 cut(s) 398, 774, 902
BmsI GCATC 2 cut(s) 59, 1119
BpiI GAAGAC 3 cut(s) 95, 309, 645
BpmI CTGGAG 2 cut(s) 795, 1024
BpuMI CCSGG 1 cut(s) 902
Bsa29I ATCGAT 1 cut(s) 1184
BsaJI CCNNGG 1 cut(s) 279
BsaXI ACNNNNNCTCC 3 cut(s) 524, 554, 1307
Bse1I ACTGG 3 cut(s) 24, 479, 1123
Bse21I CCTNAGG 1 cut(s) 215
BseBI CCWGG 2 cut(s) 398, 774
BseCI ATCGAT 1 cut(s) 1184
BseDI CCNNGG 1 cut(s) 279
BseGI GGATG 1 cut(s) 1319
BseMII CTCAG 2 cut(s) 182, 345
BseNI ACTGG 3 cut(s) 24, 479, 1123
BseRI GAGGAG 2 cut(s) 100, 296
BseSI GKGCMC 1 cut(s) 699
BseXI GCAGC 1 cut(s) 694
Bsh1236I CGCG 2 cut(s) 30, 459
BshFI GGCC 3 cut(s) 135, 401, 801
BshVI ATCGAT 1 cut(s) 1184
BsiHKAI GWGCWC 1 cut(s) 382
BsiSI CCGG 1 cut(s) 902
BslFI GGGAC 2 cut(s) 532, 884
BsmFI GGGAC 2 cut(s) 532, 884
BsnI GGCC 3 cut(s) 135, 401, 801
Bsp1286I GDGCHC 2 cut(s) 382, 699
Bsp68I TCGCGA 1 cut(s) 459
BspACI CCGC 5 cut(s) 7, 28, 69, 711, 932
BspANI GGCC 3 cut(s) 135, 401, 801
BspCNI CTCAG 2 cut(s) 183, 346
BspDI ATCGAT 1 cut(s) 1184
BspFNI CGCG 2 cut(s) 30, 459
BspHI TCATGA 1 cut(s) 756
BspLI GGNNCC 1 cut(s) 541
BspPI GGATC 2 cut(s) 313, 577
BspQI GCTCTTC 2 cut(s) 803, 1278
BsrI ACTGG 3 cut(s) 24, 479, 1123
BssECI CCNNGG 1 cut(s) 279
Bst2UI CCWGG 2 cut(s) 398, 774
Bst4CI ACNGT 3 cut(s) 43, 124, 156
Bst6I CTCTTC 2 cut(s) 803, 1278
BstC8I GCNNGC 1 cut(s) 892
BstDEI CTNAG 4 cut(s) 191, 215, 354, 1167
BstF5I GGATG 1 cut(s) 1319
BstFNI CGCG 2 cut(s) 30, 459
BstMWI GCNNNNNNNGC 4 cut(s) 146, 340, 465, 833
BstNI CCWGG 2 cut(s) 398, 774
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 3 cut(s) 396, 772, 900
BstSFI CTRYAG 1 cut(s) 700
BstSLI GKGCMC 1 cut(s) 699
BstUI CGCG 2 cut(s) 30, 459
BstV1I GCAGC 1 cut(s) 694
BstV2I GAAGAC 3 cut(s) 95, 309, 645
BstX2I RGATCY 1 cut(s) 669
BstYI RGATCY 1 cut(s) 669
Bsu15I ATCGAT 1 cut(s) 1184
Bsu36I CCTNAGG 1 cut(s) 215
BsuRI GGCC 3 cut(s) 135, 401, 801
BsuTUI ATCGAT 1 cut(s) 1184
BtgZI GCGATG 1 cut(s) 45
BtsCI GGATG 1 cut(s) 1319
BtuMI TCGCGA 1 cut(s) 459
Cac8I GCNNGC 1 cut(s) 892
CciI TCATGA 1 cut(s) 756
Cfr13I GGNCC 1 cut(s) 134
ClaI ATCGAT 1 cut(s) 1184
Csp6I GTAC 2 cut(s) 324, 1018
CviAII CATG 7 cut(s) 451, 580, 607, 643, 757, 913, 1219
CviQI GTAC 2 cut(s) 324, 1018
DdeI CTNAG 4 cut(s) 191, 215, 354, 1167
DraI TTTAAA 1 cut(s) 330
Eam1104I CTCTTC 2 cut(s) 803, 1278
EarI CTCTTC 2 cut(s) 803, 1278
Ecl136II GAGCTC 1 cut(s) 380
Eco24I GRGCYC 1 cut(s) 382
Eco53kI GAGCTC 1 cut(s) 380
Eco57I CTGAAG 2 cut(s) 788, 1320
Eco81I CCTNAGG 1 cut(s) 215
EcoICRI GAGCTC 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 936
EcoRII CCWGG 2 cut(s) 396, 772
EcoT38I GRGCYC 1 cut(s) 382
FaeI CATG 7 cut(s) 454, 583, 610, 646, 760, 916, 1222
FalI AAGNNNNNCTT 2 cut(s) 1260, 1292
FaqI GGGAC 2 cut(s) 532, 884
FatI CATG 7 cut(s) 450, 579, 606, 642, 756, 912, 1218
FauI CCCGC 1 cut(s) 925
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 2 cut(s) 708, 711
FokI GGATG 1 cut(s) 1306
FriOI GRGCYC 1 cut(s) 382
Fsp4HI GCNGC 2 cut(s) 708, 711
FspBI CTAG 6 cut(s) 383, 422, 464, 564, 1073, 1327
GluI GCNGC 2 cut(s) 708, 711
GsuI CTGGAG 2 cut(s) 795, 1024
HaeIII GGCC 3 cut(s) 135, 401, 801
HapII CCGG 1 cut(s) 902
Hin1II CATG 7 cut(s) 454, 583, 610, 646, 760, 916, 1222
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HinfI GANTC 5 cut(s) 594, 621, 1029, 1230, 1295
HpaII CCGG 1 cut(s) 902
HphI GGTGA 3 cut(s) 17, 83, 1133
Hpy166II GTNNAC 4 cut(s) 244, 448, 1210, 1308
Hpy188I TCNGA 6 cut(s) 205, 429, 807, 858, 993, 1300
Hpy188III TCNNGA 8 cut(s) 383, 458, 591, 598, 757, 955, 1003, 1097
Hpy8I GTNNAC 4 cut(s) 244, 448, 1210, 1308
HpyAV CCTTC 6 cut(s) 382, 636, 812, 1009, 1094, 1100
HpyCH4III ACNGT 3 cut(s) 43, 124, 156
HpyCH4V TGCA 3 cut(s) 50, 488, 836
HpyF10VI GCNNNNNNNGC 4 cut(s) 146, 340, 465, 833
HpyF3I CTNAG 4 cut(s) 191, 215, 354, 1167
Hsp92II CATG 7 cut(s) 454, 583, 610, 646, 760, 916, 1222
Ksp22I TGATCA 1 cut(s) 817
LguI GCTCTTC 2 cut(s) 803, 1278
LmnI GCTCC 3 cut(s) 377, 545, 776
Lsp1109I GCAGC 1 cut(s) 694
LweI GCATC 2 cut(s) 59, 1119
MaeI CTAG 6 cut(s) 383, 422, 464, 564, 1073, 1327
MaeIII GTNAC 2 cut(s) 349, 1052
MboII GAAGA 8 cut(s) 95, 309, 650, 820, 961, 980, 1136, 1265
MflI RGATCY 1 cut(s) 669
MhlI GDGCHC 2 cut(s) 382, 699
MluCI AATT 6 cut(s) 54, 489, 544, 768, 936, 1203
MlyI GAGTC 1 cut(s) 1289
MmeI TCCRAC 3 cut(s) 209, 703, 1006
MnlI CCTC 7 cut(s) 121, 274, 277, 560, 748, 920, 956
MroXI GAANNNNTTC 1 cut(s) 998
MseI TTAA 4 cut(s) 15, 329, 689, 767
MslI CAYNNNNRTG 1 cut(s) 30
MspI CCGG 1 cut(s) 902
MspR9I CCNGG 3 cut(s) 398, 774, 902
MvaI CCWGG 2 cut(s) 398, 774
MvnI CGCG 2 cut(s) 30, 459
MwoI GCNNNNNNNGC 4 cut(s) 146, 340, 465, 833
NciI CCSGG 1 cut(s) 902
NlaIII CATG 7 cut(s) 454, 583, 610, 646, 760, 916, 1222
NlaIV GGNNCC 1 cut(s) 541
NruI TCGCGA 1 cut(s) 459
NspI RCATGY 1 cut(s) 454
PagI TCATGA 1 cut(s) 756
PciI ACATGT 1 cut(s) 450
PciSI GCTCTTC 2 cut(s) 803, 1278
PdmI GAANNNNTTC 1 cut(s) 998
PfeI GAWTC 4 cut(s) 594, 621, 1029, 1230
PfoI TCCNGGA 2 cut(s) 772, 900
PkrI GCNGC 2 cut(s) 709, 712
PleI GAGTC 1 cut(s) 1289
PpsI GAGTC 1 cut(s) 1289
PscI ACATGT 1 cut(s) 450
Psp124BI GAGCTC 1 cut(s) 382
Psp6I CCWGG 2 cut(s) 396, 772
PspGI CCWGG 2 cut(s) 396, 772
PspN4I GGNNCC 1 cut(s) 541
PspPI GGNCC 1 cut(s) 134
PsuI RGATCY 1 cut(s) 669
RruI TCGCGA 1 cut(s) 459
RsaI GTAC 2 cut(s) 325, 1019
RsaNI GTAC 2 cut(s) 324, 1018
RseI CAYNNNNRTG 1 cut(s) 30
SacI GAGCTC 1 cut(s) 382
SapI GCTCTTC 2 cut(s) 803, 1278
SaqAI TTAA 4 cut(s) 15, 329, 689, 767
SatI GCNGC 2 cut(s) 708, 711
Sau96I GGNCC 1 cut(s) 134
ScaI AGTACT 1 cut(s) 325
SchI GAGTC 1 cut(s) 1289
ScrFI CCNGG 3 cut(s) 398, 774, 902
SduI GDGCHC 2 cut(s) 382, 699
SfaNI GCATC 2 cut(s) 59, 1119
SfcI CTRYAG 1 cut(s) 700
SmiMI CAYNNNNRTG 1 cut(s) 30
Sse9I AATT 6 cut(s) 54, 489, 544, 768, 936, 1203
SsiI CCGC 5 cut(s) 7, 28, 69, 711, 932
SspI AATATT 2 cut(s) 295, 1141
SspMI CTAG 6 cut(s) 383, 422, 464, 564, 1073, 1327
SstI GAGCTC 1 cut(s) 382
StyD4I CCNGG 3 cut(s) 396, 772, 900
TaaI ACNGT 3 cut(s) 43, 124, 156
TaqI TCGA 1 cut(s) 1184
TasI AATT 6 cut(s) 54, 489, 544, 768, 936, 1203
TatI WGTACW 2 cut(s) 323, 1017
TauI GCSGC 1 cut(s) 713
TfiI GAWTC 4 cut(s) 594, 621, 1029, 1230
Tru1I TTAA 4 cut(s) 15, 329, 689, 767
Tru9I TTAA 4 cut(s) 15, 329, 689, 767
TseI GCWGC 1 cut(s) 707
TspDTI ATGAA 5 cut(s) 17, 47, 397, 518, 595
TspGWI ACGGA 1 cut(s) 1325
XapI RAATTY 1 cut(s) 936
XbaI TCTAGA 1 cut(s) 382
XceI RCATGY 1 cut(s) 454
XcmI CCANNNNNNNNNTGG 1 cut(s) 371
XmnI GAANNNNTTC 1 cut(s) 998
XspI CTAG 6 cut(s) 383, 422, 464, 564, 1073, 1327
ZrmI AGTACT 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.