Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Reverse (-)

67834385 .. 67837859

Gene Structure 3475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00131290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGGATCGAAGAGTGGGCAGAAGATGATTTTGCAGGGGCTTACTGGGTTTGCTCAACCTGGTGGGGTTTTGGCTATAATGGGTCCTTCTGGCTGTGGCAAATCTACCCTTTTGGATGCTTTGGCAGGAAGGCTAAGTTCAAGCTCACAGCAGAGAGGAAAGATCTTAATCAATGGCCGGAAAGAAACTCTTGCCTACGGAACCTCGGCATATGTGACACAAGATGACACGTTAATGACAACATTGACAGTAAGGGGAAGTTGTGAATTACTCGGCTCAACTACAACTCCCCTAACTCCATGTCGAAAACAGAAAAAGAAGGAAAGAGCAGAGACGACGATAAGGGAGATGGGTTTGCAAGACTCCATGGACACAAGAATTGGAGGTTGGAGCAGAAAAGGCCTCAGTGGTGGACAAAAAAGAAGAAGAGTTAGCATCTGCCTTGAAATCTTAACTCGTCCGAAGCTTCTATTCCTCGATGAGCCTACTAGTGGACTAGACAGTGCAGCATCTTACCATGTCATGAACCGCATTATTAAACTGGCTCACCGCGATGGAAGGACAGTCATTTCATCAATTCATCAACCTAGCAGTGAAGTGTTTGAGCTTTTCCAAAATCTTTGTCTTCTCTCCTCTGGTAGAACAGTCTATTTTTGGCCCTGCTTCAACGGCAGAACAGTTTTTGCTTTAAATGGCTTCCCATGCCCAGCTCTGAGAAACCCATCAGATCACTGCCTGAGAACTATAAACAAGGATTTTGATATTGACATTGAACAAGGGCTTGATGGAAAAACAAGCACCGAGGAAGCAATTGAGATTCTCATAAATTCATTCAAGTCTTCAGGAACTTTCAAGCAACTTGAGCACTGGGTAACTGAAATTTGCCAACAGAAAGGTGGAGCTCTAATGAAAGGAAGCCAAGCCAACTTTATAACTCAATGCCTGGTTTTGACAAGGAGATCATTCGTGAATATGTACCGCGATCTAGGCTACTACTGGCTTCGTCTTGCAATTTACATTGCCTTGTGCTTATGTGTAGGGACTATTTATCATGAAATTGACTCCACTTTTGACTCAATACAGGATAGAGCATCAATGCTCATGTTTGTTGCAGCATTCTTAACTTTCATGGCAATAGGGGGATTTCCTTCTTTTGTAGAAGACATGAAGGTGACAATAGCCTATTTCCTTGTTGGCCTTCAGAAGAGCTTTGACCACTTCACCTATTTTGCATTGGTTCTGTTTGTGTGTCTGATGTTGGTTGAGAGCCTGATGATGATTGTAGCAAGCATTGTGCCAGATTTCCCTAATGGGTGTTATCACAGGTTCTGGAATTCTAGGAGTGATGTTGTTGAATGGAGGTTTCTTCCGAAAAAACCTCACGATCTTCCAAACCCCTTCTGGAGATACCCAATGTACTATATTGGATTCCACAAGTATGTAAATCAAGGATTCTACAAGAATGAGTTTGAAGGACTAACATTTCCCAGTAATCAAGCAGGAGGGCCACCCATCATTACTGGTGAAGAAATATTGAAGAGTATTTGGCAAATGGAGATGGGCTACTCTAAGTGGGTTGATCTTGCCATTTTGTTTGGAATGGTAATTGTTTACAGGCTCATGTTCTTCGGAATCATCAAGACAAGTGAAAAGCTAGGTCGCGCCAATCATCAAAGCTCTTCTTTAACAGTTCTTAACAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

567

Amino Acids

63.77

Weight (kDa)

8.98

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	16 - 164	1.8e-25	ABC transporter
ABC2_membrane	PF01061	312 - 391	7.3e-11	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	932
AccII	CGCG	3 cut(s)	552, 981, 1662
AciI	CCGC	3 cut(s)	529, 550, 979
AclWI	GGATC	1 cut(s)	13
AcoI	YGGCCR	1 cut(s)	175
AcsI	RAATTY	3 cut(s)	826, 879, 1333
AcuI	CTGAAG	2 cut(s)	825, 1184
AfaI	GTAC	2 cut(s)	977, 1418
AfiI	CCNNNNNNNGG	1 cut(s)	491
AflIII	ACRYGT	1 cut(s)	228
AgsI	TTSAA	9 cut(s)	141, 446, 667, 773, 835, 853, 1355, 1472, 1537
AhlI	ACTAGT	1 cut(s)	488
AjnI	CCWGG	2 cut(s)	58, 942
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AluBI	AGCT	8 cut(s)	144, 466, 607, 710, 902, 1209, 1654, 1677
AluI	AGCT	8 cut(s)	144, 466, 607, 710, 902, 1209, 1654, 1677
Alw21I	GWGCWC	2 cut(s)	867, 904
Alw26I	GTCTC	1 cut(s)	326
AlwI	GGATC	1 cut(s)	13
AlwNI	CAGNNNCTG	1 cut(s)	1329
AoxI	GGCC	5 cut(s)	175, 400, 656, 1195, 1505
ApeKI	GCWGC	2 cut(s)	506, 1112
ApoI	RAATTY	3 cut(s)	826, 879, 1333
ArsI	GACNNNNNNTTYG	4 cut(s)	607, 639, 1052, 1084
AspLEI	GCGC	1 cut(s)	1664
AspS9I	GGNCC	3 cut(s)	83, 657, 1505
AsuHPI	GGTGA	4 cut(s)	539, 1183, 1213, 1535
AvaII	GGWCC	1 cut(s)	83
BanII	GRGCYC	1 cut(s)	904
BbsI	GAAGAC	3 cut(s)	617, 831, 1167
Bbv12I	GWGCWC	2 cut(s)	867, 904
BbvI	GCAGC	2 cut(s)	518, 1124
BccI	CCATC	6 cut(s)	343, 548, 730, 779, 1520, 1552
BceAI	ACGGC	1 cut(s)	685
BciT130I	CCWGG	2 cut(s)	60, 944
BcoDI	GTCTC	1 cut(s)	326
BcuI	ACTAGT	1 cut(s)	488
BfaI	CTAG	6 cut(s)	489, 497, 588, 986, 1338, 1655
BglII	AGATCT	1 cut(s)	162
BisI	GCNGC	2 cut(s)	507, 1113
BlsI	GCNGC	2 cut(s)	508, 1114
Bme1390I	CCNGG	2 cut(s)	60, 944
Bme18I	GGWCC	1 cut(s)	83
BmgT120I	GGNCC	3 cut(s)	83, 657, 1505
BmiI	GGNNCC	2 cut(s)	84, 202
BmrFI	CCNGG	2 cut(s)	60, 944
BmrI	ACTGGG	3 cut(s)	54, 877, 1482
BmsI	GCATC	4 cut(s)	106, 444, 518, 1100
BmuI	ACTGGG	3 cut(s)	54, 877, 1482
BpiI	GAAGAC	3 cut(s)	617, 831, 1167
BpmI	CTGGAG	1 cut(s)	1423
BpuEI	CTTGAG	1 cut(s)	881
BsaBI	GATNNNNATC	1 cut(s)	167
BsaJI	CCNNGG	3 cut(s)	204, 366, 801
BsaXI	ACNNNNNCTCC	2 cut(s)	271, 301
Bsc4I	CCNNNNNNNGG	1 cut(s)	491
Bse1I	ACTGG	6 cut(s)	49, 546, 872, 1001, 1488, 1525
Bse3DI	GCAATG	1 cut(s)	1017
Bse8I	GATNNNNATC	1 cut(s)	167
BseBI	CCWGG	2 cut(s)	60, 944
BseDI	CCNNGG	3 cut(s)	204, 366, 801
BseGI	GGATG	1 cut(s)	121
BseJI	GATNNNNATC	1 cut(s)	167
BseLI	CCNNNNNNNGG	1 cut(s)	491
BseMI	GCAATG	1 cut(s)	1017
BseMII	CTCAG	3 cut(s)	418, 704, 728
BseNI	ACTGG	6 cut(s)	49, 546, 872, 1001, 1488, 1525
BseRI	GAGGAG	1 cut(s)	622
BseXI	GCAGC	2 cut(s)	518, 1124
BseYI	CCCAGC	1 cut(s)	706
BsgI	GTGCAG	1 cut(s)	525
Bsh1236I	CGCG	3 cut(s)	552, 981, 1662
BshFI	GGCC	5 cut(s)	177, 402, 658, 1197, 1507
BsiHKAI	GWGCWC	2 cut(s)	867, 904
BsiSI	CCGG	1 cut(s)	178
BslFI	GGGAC	1 cut(s)	1054
BslI	CCNNNNNNNGG	1 cut(s)	491
BsmAI	GTCTC	1 cut(s)	326
BsmBI	CGTCTC	1 cut(s)	326
BsmFI	GGGAC	1 cut(s)	1054
BsmI	GAATGC	1 cut(s)	1115
BsnI	GGCC	5 cut(s)	177, 402, 658, 1197, 1507
Bsp1286I	GDGCHC	2 cut(s)	867, 904
Bsp143I	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
Bsp19I	CCATGG	1 cut(s)	366
BspACI	CCGC	3 cut(s)	529, 550, 979
BspANI	GGCC	5 cut(s)	177, 402, 658, 1197, 1507
BspCNI	CTCAG	3 cut(s)	417, 705, 729
BspFNI	CGCG	3 cut(s)	552, 981, 1662
BspHI	TCATGA	2 cut(s)	522, 1051
BspLI	GGNNCC	2 cut(s)	84, 202
BspPI	GGATC	1 cut(s)	13
BspQI	GCTCTTC	2 cut(s)	1199, 1684
BsrDI	GCAATG	1 cut(s)	1017
BsrI	ACTGG	6 cut(s)	49, 546, 872, 1001, 1488, 1525
BssECI	CCNNGG	3 cut(s)	204, 366, 801
BssMI	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
BssT1I	CCWWGG	1 cut(s)	366
Bst2UI	CCWGG	2 cut(s)	60, 944
Bst4CI	ACNGT	7 cut(s)	250, 503, 565, 646, 679, 1690, 1700
Bst6I	CTCTTC	5 cut(s)	5, 421, 1199, 1532, 1684
BstC8I	GCNNGC	1 cut(s)	1288
BstDEI	CTNAG	5 cut(s)	134, 404, 713, 737, 1569
BstDSI	CCRYGG	1 cut(s)	366
BstF5I	GGATG	1 cut(s)	121
BstFNI	CGCG	3 cut(s)	552, 981, 1662
BstHHI	GCGC	1 cut(s)	1664
BstKTI	GATC	7 cut(s)	8, 165, 730, 962, 985, 1387, 1582
BstMAI	GTCTC	1 cut(s)	326
BstMBI	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
BstMWI	GCNNNNNNNGC	5 cut(s)	399, 669, 702, 862, 987
BstNI	CCWGG	2 cut(s)	60, 944
BstSCI	CCNGG	2 cut(s)	58, 942
BstUI	CGCG	3 cut(s)	552, 981, 1662
BstV1I	GCAGC	2 cut(s)	518, 1124
BstV2I	GAAGAC	3 cut(s)	617, 831, 1167
BstX2I	RGATCY	1 cut(s)	162
BstYI	RGATCY	1 cut(s)	162
BsuRI	GGCC	5 cut(s)	177, 402, 658, 1197, 1507
BtgI	CCRYGG	1 cut(s)	366
BtgZI	GCGATG	1 cut(s)	567
BtsCI	GGATG	1 cut(s)	121
BtsI	GCAGTG	2 cut(s)	598, 730
BtsIMutI	CAGTG	5 cut(s)	412, 508, 598, 730, 865
Cac8I	GCNNGC	1 cut(s)	1288
CaiI	CAGNNNCTG	1 cut(s)	1329
CciI	TCATGA	2 cut(s)	522, 1051
CfoI	GCGC	1 cut(s)	1664
Cfr13I	GGNCC	3 cut(s)	83, 657, 1505
CsiI	ACCWGGT	1 cut(s)	58
Csp6I	GTAC	2 cut(s)	976, 1417
CviQI	GTAC	2 cut(s)	976, 1417
DdeI	CTNAG	5 cut(s)	134, 404, 713, 737, 1569
DpnI	GATC	7 cut(s)	7, 164, 729, 961, 984, 1386, 1581
DpnII	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
DraI	TTTAAA	1 cut(s)	690
EaeI	YGGCCR	1 cut(s)	175
Eam1104I	CTCTTC	5 cut(s)	5, 421, 1199, 1532, 1684
EarI	CTCTTC	5 cut(s)	5, 421, 1199, 1532, 1684
Ecl136II	GAGCTC	1 cut(s)	902
Eco130I	CCWWGG	1 cut(s)	366
Eco147I	AGGCCT	1 cut(s)	402
Eco24I	GRGCYC	1 cut(s)	904
Eco47I	GGWCC	1 cut(s)	83
Eco53kI	GAGCTC	1 cut(s)	902
Eco57I	CTGAAG	2 cut(s)	825, 1184
EcoICRI	GAGCTC	1 cut(s)	902
EcoO109I	RGGNCCY	1 cut(s)	83
EcoRI	GAATTC	1 cut(s)	1333
EcoRII	CCWGG	2 cut(s)	58, 942
EcoT14I	CCWWGG	1 cut(s)	366
EcoT38I	GRGCYC	1 cut(s)	904
ErhI	CCWWGG	1 cut(s)	366
Esp3I	CGTCTC	1 cut(s)	326
FalI	AAGNNNNNCTT	4 cut(s)	174, 206, 1666, 1698
FaqI	GGGAC	1 cut(s)	1054
FauNDI	CATATG	1 cut(s)	211
Fnu4HI	GCNGC	2 cut(s)	507, 1113
FokI	GGATG	1 cut(s)	128
FriOI	GRGCYC	1 cut(s)	904
Fsp4HI	GCNGC	2 cut(s)	507, 1113
FspBI	CTAG	6 cut(s)	489, 497, 588, 986, 1338, 1655
GlaI	GCGC	1 cut(s)	1663
GluI	GCNGC	2 cut(s)	507, 1113
GsaI	CCCAGC	1 cut(s)	710
GsuI	CTGGAG	1 cut(s)	1423
HaeIII	GGCC	5 cut(s)	177, 402, 658, 1197, 1507
HapII	CCGG	1 cut(s)	178
HhaI	GCGC	1 cut(s)	1664
Hin6I	GCGC	1 cut(s)	1662
HinP1I	GCGC	1 cut(s)	1662
HindIII	AAGCTT	1 cut(s)	464
HinfI	GANTC	7 cut(s)	362, 817, 1061, 1073, 1428, 1452, 1632
HpaII	CCGG	1 cut(s)	178
HphI	GGTGA	4 cut(s)	539, 1183, 1213, 1535
Hpy166II	GTNNAC	3 cut(s)	413, 494, 1612
Hpy188I	TCNGA	7 cut(s)	462, 714, 727, 1203, 1254, 1371, 1631
Hpy188III	TCNNGA	8 cut(s)	523, 843, 967, 1052, 1330, 1382, 1402, 1639
Hpy8I	GTNNAC	3 cut(s)	413, 494, 1612
Hpy99I	CGWCG	1 cut(s)	340
HpyAV	CCTTC	9 cut(s)	96, 123, 313, 552, 1158, 1162, 1208, 1408, 1466
HpyCH4III	ACNGT	7 cut(s)	250, 503, 565, 646, 679, 1690, 1700
HpyCH4IV	ACGT	1 cut(s)	230
HpyCH4V	TGCA	6 cut(s)	34, 358, 506, 1010, 1112, 1232
HpyF10VI	GCNNNNNNNGC	5 cut(s)	399, 669, 702, 862, 987
HpyF3I	CTNAG	5 cut(s)	134, 404, 713, 737, 1569
HpySE526I	ACGT	1 cut(s)	230
HspAI	GCGC	1 cut(s)	1662
Kzo9I	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
LguI	GCTCTTC	2 cut(s)	1199, 1684
LmnI	GCTCC	2 cut(s)	390, 899
Lsp1109I	GCAGC	2 cut(s)	518, 1124
LweI	GCATC	4 cut(s)	106, 444, 518, 1100
MabI	ACCWGGT	1 cut(s)	58
MaeI	CTAG	6 cut(s)	489, 497, 588, 986, 1338, 1655
MaeII	ACGT	1 cut(s)	230
MaeIII	GTNAC	3 cut(s)	214, 871, 1171
MalI	GATC	7 cut(s)	7, 164, 729, 961, 984, 1386, 1581
MboI	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	1 cut(s)	162
MhlI	GDGCHC	2 cut(s)	867, 904
MlyI	GAGTC	3 cut(s)	356, 1055, 1067
MmeI	TCCRAC	1 cut(s)	368
MseI	TTAA	9 cut(s)	167, 233, 452, 537, 689, 1121, 1685, 1695, 1702
MslI	CAYNNNNRTG	4 cut(s)	233, 552, 1169, 1437
MspI	CCGG	1 cut(s)	178
MspR9I	CCNGG	2 cut(s)	60, 944
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	1 cut(s)	1115
MvaI	CCWGG	2 cut(s)	60, 944
MvnI	CGCG	3 cut(s)	552, 981, 1662
MwoI	GCNNNNNNNGC	5 cut(s)	399, 669, 702, 862, 987
NcoI	CCATGG	1 cut(s)	366
NdeI	CATATG	1 cut(s)	211
NdeII	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
NlaIV	GGNNCC	2 cut(s)	84, 202
NmeAIII	GCCGAG	2 cut(s)	185, 252
NmuCI	GTSAC	2 cut(s)	214, 1171
PagI	TCATGA	2 cut(s)	522, 1051
PceI	AGGCCT	1 cut(s)	402
PciSI	GCTCTTC	2 cut(s)	1199, 1684
PctI	GAATGC	1 cut(s)	1115
PfeI	GAWTC	4 cut(s)	817, 1428, 1452, 1632
PkrI	GCNGC	2 cut(s)	508, 1114
PleI	GAGTC	3 cut(s)	356, 1055, 1067
PpsI	GAGTC	3 cut(s)	356, 1055, 1067
PpuMI	RGGWCCY	1 cut(s)	83
PsiI	TTATAA	1 cut(s)	932
Psp124BI	GAGCTC	1 cut(s)	904
Psp5II	RGGWCCY	1 cut(s)	83
Psp6I	CCWGG	2 cut(s)	58, 942
PspFI	CCCAGC	1 cut(s)	706
PspGI	CCWGG	2 cut(s)	58, 942
PspN4I	GGNNCC	2 cut(s)	84, 202
PspPI	GGNCC	3 cut(s)	83, 657, 1505
PspPPI	RGGWCCY	1 cut(s)	83
PstNI	CAGNNNCTG	1 cut(s)	1329
PsuI	RGATCY	1 cut(s)	162
RsaI	GTAC	2 cut(s)	977, 1418
RsaNI	GTAC	2 cut(s)	976, 1417
RseI	CAYNNNNRTG	4 cut(s)	233, 552, 1169, 1437
SacI	GAGCTC	1 cut(s)	904
SapI	GCTCTTC	2 cut(s)	1199, 1684
SaqAI	TTAA	9 cut(s)	167, 233, 452, 537, 689, 1121, 1685, 1695, 1702
SatI	GCNGC	2 cut(s)	507, 1113
Sau3AI	GATC	7 cut(s)	5, 162, 727, 959, 982, 1384, 1579
Sau96I	GGNCC	3 cut(s)	83, 657, 1505
SchI	GAGTC	3 cut(s)	356, 1055, 1067
ScrFI	CCNGG	2 cut(s)	60, 944
SduI	GDGCHC	2 cut(s)	867, 904
SexAI	ACCWGGT	1 cut(s)	58
SfaNI	GCATC	4 cut(s)	106, 444, 518, 1100
SinI	GGWCC	1 cut(s)	83
SmiMI	CAYNNNNRTG	4 cut(s)	233, 552, 1169, 1437
SmlI	CTYRAG	1 cut(s)	860
SmoI	CTYRAG	1 cut(s)	860
SpeI	ACTAGT	1 cut(s)	488
SseBI	AGGCCT	1 cut(s)	402
SsiI	CCGC	3 cut(s)	529, 550, 979
SspI	AATATT	1 cut(s)	1533
SspMI	CTAG	6 cut(s)	489, 497, 588, 986, 1338, 1655
SstI	GAGCTC	1 cut(s)	904
StuI	AGGCCT	1 cut(s)	402
StyD4I	CCNGG	2 cut(s)	58, 942
StyI	CCWWGG	1 cut(s)	366
TaaI	ACNGT	7 cut(s)	250, 503, 565, 646, 679, 1690, 1700
TaiI	ACGT	1 cut(s)	233
TaqI	TCGA	3 cut(s)	8, 304, 477
TatI	WGTACW	1 cut(s)	1416
TfiI	GAWTC	4 cut(s)	817, 1428, 1452, 1632
Tru1I	TTAA	9 cut(s)	167, 233, 452, 537, 689, 1121, 1685, 1695, 1702
Tru9I	TTAA	9 cut(s)	167, 233, 452, 537, 689, 1121, 1685, 1695, 1702
TscAI	CASTG	5 cut(s)	412, 508, 598, 737, 872
TseFI	GTSAC	2 cut(s)	214, 1171
TseI	GCWGC	2 cut(s)	506, 1112
Tsp45I	GTSAC	2 cut(s)	214, 1171
TspDTI	ATGAA	8 cut(s)	539, 561, 569, 819, 923, 1068, 1117, 1181
TspGWI	ACGGA	1 cut(s)	213
TspRI	CASTG	5 cut(s)	412, 508, 598, 737, 872
VpaK11BI	GGWCC	1 cut(s)	83
XapI	RAATTY	3 cut(s)	826, 879, 1333
XcmI	CCANNNNNNNNNTGG	2 cut(s)	893, 1398
XspI	CTAG	6 cut(s)	489, 497, 588, 986, 1338, 1655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.